mRNA_S-ischiensis_contig89.20350.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig89.20350.1 vs. uniprot
Match: A0A6H5L312_9PHAE (GT8 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L312_9PHAE) HSP 1 Score: 208 bits (530), Expect = 3.250e-57 Identity = 118/297 (39.73%), Postives = 161/297 (54.21%), Query Frame = 2
Query: 65 KSDVSYVTHLEGHSTAGVRTLGASVRRSGSLADLVVLVDKGTPHSALRQLHGLGWRVKL-----VNWSTSGLNAHD-LSEGGYARLLAWTLTEYRRVVLLDQASMVLDNVDDLFQCGPVCAVMEQAELPNPTLIVLEPSWETFRDMASRVSTTFSYSGDVKGFMASYYPDFAACPLFDLENKALPRGGTGVGANGRQEMADGAAVAAAALALTVAGDITDETAGHLQCRRLPTRYGGDLLLAALNGGRGMVRTQNPMPEEWWHQRRARVMRAEFSLGKSSPWQWGAAPLMPFAAPWE 937
+SDV+Y L G+RTLG S+ S + ADLV ++ G ++ GWR++ V+ G++ D SE A W LTEY+RVVLL +V++N+DDLF C +CA M+QAE+ + +LIVLEP + ++ M+ V T +++S + +GF+ +Y F C FDLEN L T + D H C RLPTRY GDL L LNGG GMVRT+N MPEEWW QRRARV+R EF+ + PW W A+P +PF + WE
Sbjct: 79 RSDVAYAALLMNDHDRGIRTLGQSLIDSRTSADLVAILGAGVTKVTETRMRAQGWRIRRLAVGGVDGDGGGVHKLDRASESVLAHASVWALTEYKRVVLLSDNMLVVENIDDLFLCEGICAAMQQAEVVSTSLIVLEPDLDIYQHMSRSVGTIYNFSNNFQGFLNTYLAGFETCAFFDLENPCLQDPSTDPNRGPDAPLLD-----------------------H-SCHRLPTRYNGDLALVMLNGGLGMVRTKNAMPEEWWRQRRARVVRFEFAGLR--PWMWFASPFLPFVSTWE 349
BLAST of mRNA_S-ischiensis_contig89.20350.1 vs. uniprot
Match: A0A836CGY7_9STRA (Nucleotide-diphospho-sugar transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGY7_9STRA) HSP 1 Score: 143 bits (361), Expect = 1.070e-33 Identity = 101/311 (32.48%), Postives = 148/311 (47.59%), Query Frame = 2
Query: 77 SYVTHLEGHSTAGVRTLGASVRRSGSLADLVVLVDKGTPHSALRQLHGLGWRVKLVNWSTSGLNAHDLSE--GGYARLLAWTLTEYRRVVLLDQ-----------ASMVLDNVDDLFQCGPVCAVMEQAELPNPTLIVLEPSWETFRDMASRVSTTFSYSGDVKGFMASYYPDFAACPLFD---------LENKALPRGGTGVGANGRQEMADGAAVAAAALALTVAGDITDETAGHLQCRRLPTRYGGDLLLAALNGGRGMVRTQNPMPEE---WWHQRRARVMRAEFSLGKSSPWQWGAAPLMPFAAPW 934
+YVT L + AG R LG S+ GS A++ VLV L GWR+ V T+ NA S Y +LL + + EY ++V LD A++VL+NVD+LFQCGP CA M Q EL N ++V+EP+ + +RDM ++ + SY+G +GF+ S+Y FA CPLF+ N+ GG+G GA+ C RLP+RY GD L+ ++ + RT++ +P W ++R ++M F GK PW W P +P+ W
Sbjct: 34 AYVTLLYNNFVAGTRALGRSLLDVGSAAEMAVLVTPDVSQRTRTILAKDGWRIVPVE-VTANPNAGFQSRLVFVYTKLLIFNMVEYDKLVFLDSDTLQHHEIPQTAALVLENVDELFQCGPFCANMRQCELLNSGVLVVEPNADLYRDMHNKFAQLPSYTGGDQGFLNSWYSKFAECPLFEPYSEDAAPHAPNEPANDGGSGTGAH---------------------------------CWRLPSRYNGDWPLSFVDSP--VQRTRHALPAAPPLWAKRKRVKIMHYTFGTGK--PWNWWTYPFLPYVDKW 306
BLAST of mRNA_S-ischiensis_contig89.20350.1 vs. uniprot
Match: A0A6H5JVB1_9PHAE (GT8 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JVB1_9PHAE) HSP 1 Score: 140 bits (353), Expect = 2.570e-32 Identity = 106/332 (31.93%), Postives = 158/332 (47.59%), Query Frame = 2
Query: 77 SYVTHLEGHSTAGVRTLGASVRRSGSLADLVVLVDKGTPHSALRQLHGLGWRVKLVNWSTS-GLNAHDLSEGGYARLLAWTLTE-YRRVVLLDQASMVLDNVDDLFQCGPVCAVMEQAELPNPTLIVLEPSWETFRDMASRVSTTFSYSGDVKGFMASYYPDFAACPLFD---LENKALPRGGTGV-------GANGRQEMADGAAVAAAAL---------------ALTVAGD-------ITDETAGHLQ-----CRRLPTRYGGDLLLAALNGGRGMVRTQNPMPE---EWWHQRRARVMRAEFSLGKSSPWQWGAAPLMPFAAPWEELF 946
+Y T L G R LG S+R SG+ AD VVLV ++L GW V+ V + N Y +LL + E Y R+V LD ++VL+N+D+LF+C P CAVM +EL N ++V+ PS E + M + SY+G +GF+ S+YP FAACP F+ + L G+G+ G GR+ + G + L A+ + G+ + E A ++ C+RLPTRY GD L ++G +V+ + PE +W +RR +V F+ G + PW W P +P+ W E F
Sbjct: 108 AYATLLYSDFIEGTRALGQSLRESGTSADTVVLVTPDVRRETRQKLAEDGWIVRPVAVERNPNQNFQSRLVFVYTKLLIVEMEEEYDRIVFLDADTLVLENIDELFECEPFCAVMRHSELLNSGVLVITPSKELYGHMHDLIGELDSYTGGDQGFLNSFYPYFAACPAFEPYPILGSRLAGVGSGMEEVNGRGGGGGRRRVLGGDRELDSVLVEGRGVEDKGRGERQAVAMQGEGGTRRRRLAGEGAEWVRPKGWGCKRLPTRYNGDWPLLFVDGDLQVVQGKEAGPEAPADW--KRRKKVKILHFTFGTAKPWNWWTYPFLPYVDLWLEAF 437
BLAST of mRNA_S-ischiensis_contig89.20350.1 vs. uniprot
Match: A0A6I9RB79_ELAGV (Hexosyltransferase n=3 Tax=Arecaceae TaxID=4710 RepID=A0A6I9RB79_ELAGV) HSP 1 Score: 130 bits (326), Expect = 2.840e-29 Identity = 79/197 (40.10%), Postives = 111/197 (56.35%), Query Frame = 2
Query: 2 PGGCLVGMEPVLLDH--EGSSGRKSDVSYVTHLEGHS-TAGVRTLGASVRRSGSLADLVVLVDKGTPHSALRQLHGLGWRVKLVNWSTSGLNAHDLSEGG-YARLLAWTLTEYRRVVLLDQASMVLDNVDDLFQCGPVCAVMEQAELPNPTLIVLEPSWETFRDMASRVSTTFSYSGDVKGFMASYYPDFAACPLFD 580
P +G +LL GS K+D +YVT L G GVR LG S+R +GS D+VVLV G A + L GW V+ ++ + G Y +L + LT YR+VV LD ++VL N+DDLF CG CA ++ +E N ++V+EPS F+DM S+V++ SY+G +GF+ SYY DFA LF+
Sbjct: 3 PSASKLGFFAILLAALMAGSCWAKTDGAYVTLLYGDEFLLGVRVLGKSIRDTGSTKDMVVLVSDGVSDHAKKLLRADGWIVEPISLLANPNQVRPKRFWGVYTKLKIFNLTSYRKVVYLDADTIVLKNIDDLFNCGRFCANLKHSERLNSGVMVVEPSETVFKDMMSKVNSLPSYTGGDQGFLNSYYADFANAHLFE 199
BLAST of mRNA_S-ischiensis_contig89.20350.1 vs. uniprot
Match: A0A2G9GVE2_9LAMI (Hexosyltransferase n=2 Tax=Handroanthus impetiginosus TaxID=429701 RepID=A0A2G9GVE2_9LAMI) HSP 1 Score: 129 bits (324), Expect = 5.150e-29 Identity = 72/190 (37.89%), Postives = 112/190 (58.95%), Query Frame = 2
Query: 62 RKSDVSYVTHLEGHS-TAGVRTLGASVRRSGSLADLVVLVDKGTPHSALRQLHGLGWRVKLVNWSTSGLNAHDLSEGG-YARLLAWTLTEYRRVVLLDQASMVLDNVDDLFQCGPVCAVMEQAELPNPTLIVLEPSWETFRDMASRVSTTFSYSGDVKGFMASYYPDFAACPLFD-------LENKALPR 604
+ S+ +YVT L G GVR LG S+R +GS D+V LV G A + L GW VK ++ + G Y +L + LT Y++VV LD ++V+ N+DDLF+C CA ++ +E N ++V+EPS + F+DM ++VST +SY+G +GF+ SY+PDFA +FD L+++ +P+
Sbjct: 31 QNSEEAYVTLLYGDEFLLGVRVLGKSIRDTGSTKDMVALVSDGVSDYAKKLLQADGWIVKTISLLENPNQVRPTRFWGVYTKLKIFNLTNYKKVVYLDADTIVVKNIDDLFKCHKFCANLKHSERLNSGVMVVEPSEKLFKDMMTKVSTMYSYTGGDQGFLNSYFPDFANARIFDPNASPEELKSRPIPQ 220
BLAST of mRNA_S-ischiensis_contig89.20350.1 vs. uniprot
Match: A0A8K0IIU0_COCNU (Putative Inositol phosphorylceramide glucuronosyltransferase 1 n=1 Tax=Cocos nucifera TaxID=13894 RepID=A0A8K0IIU0_COCNU) HSP 1 Score: 130 bits (326), Expect = 5.330e-29 Identity = 75/179 (41.90%), Postives = 105/179 (58.66%), Query Frame = 2
Query: 50 GSSGRKSDVSYVTHLEGHS-TAGVRTLGASVRRSGSLADLVVLVDKGTPHSALRQLHGLGWRVKLVNWSTSGLNAHDLSEGG-YARLLAWTLTEYRRVVLLDQASMVLDNVDDLFQCGPVCAVMEQAELPNPTLIVLEPSWETFRDMASRVSTTFSYSGDVKGFMASYYPDFAACPLFD 580
GS K+D +YVT L G GVR LG S+R +GS D+VVLV G A + L GW V+ ++ + G Y +L + LT YR+VV LD ++VL N+DDLF CG CA ++ +E N ++V+EPS F+DM S+V++ SY+G +GF+ SYY DFA LF+
Sbjct: 21 GSCRAKTDEAYVTLLYGDEFLLGVRVLGKSIRDTGSTKDMVVLVSDGVSDHAKKLLRADGWMVEPISLLANPNQVRPKRFWGVYTKLKIFNLTTYRKVVYLDADTIVLKNIDDLFNCGRFCANLKHSERLNSGVMVVEPSETVFKDMMSKVNSLPSYTGGDQGFLNSYYADFANAHLFE 199
BLAST of mRNA_S-ischiensis_contig89.20350.1 vs. uniprot
Match: UPI0009E5F592 (inositol phosphorylceramide glucuronosyltransferase 1 n=1 Tax=Phalaenopsis equestris TaxID=78828 RepID=UPI0009E5F592) HSP 1 Score: 126 bits (317), Expect = 6.890e-29 Identity = 75/193 (38.86%), Postives = 113/193 (58.55%), Query Frame = 2
Query: 14 LVGMEPVLL--DHEGSSGRKSDVSYVTHLEGHS-TAGVRTLGASVRRSGSLADLVVLVDKGTPHSALRQLHGLGWRVKLVNWSTSGLNAHDLSEGG-YARLLAWTLTEYRRVVLLDQASMVLDNVDDLFQCGPVCAVMEQAELPNPTLIVLEPSWETFRDMASRVSTTFSYSGDVKGFMASYYPDFAACPLFD 580
+ G+ VLL G S +S+ +YVT L G GVR LG S+R +GS D+VVL G A + L GW+V+L++ T+ G Y +L + +T Y++VV LD ++V+ N+DDLFQC CA ++ +E N ++V+EPS F+DM S+V++ SY+G +GF+ S+Y DFA LF+
Sbjct: 7 IFGLLVVLLALTSVGKSSARSEEAYVTLLYGDEFVLGVRVLGKSIRDTGSSKDMVVLASDGVSDYAKKLLQVDGWKVELISLLTNPNQVRPKRFWGVYTKLKIFNMTTYKKVVYLDADTIVVKNIDDLFQCRGFCANLKHSERLNSGVMVVEPSDSLFKDMMSKVNSLPSYTGGDQGFLNSFYGDFANAHLFE 199
BLAST of mRNA_S-ischiensis_contig89.20350.1 vs. uniprot
Match: A0A103Y931_CYNCS (Hexosyltransferase (Fragment) n=1 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=A0A103Y931_CYNCS) HSP 1 Score: 124 bits (310), Expect = 1.740e-27 Identity = 70/180 (38.89%), Postives = 108/180 (60.00%), Query Frame = 2
Query: 53 SSGRKSDVSYVTHLEGHS-TAGVRTLGASVRRSGSLADLVVLVDKGTPHSALRQLHGLGWRVKLVNWSTSGLNAHDLSEGG-YARLLAWTLTEYRRVVLLDQASMVLDNVDDLFQCGPVCAVMEQAELPNPTLIVLEPSWETFRDMASRVSTTFSYSGDVKGFMASYYPDFAACPLFDLE 586
SSG + +YVT L G GVR LG S+R + + D+VVLV G + A + L GW V ++ + G Y +L + +T+Y++VV LD ++V+ N+DDLF+CG CA ++ +E N ++V+EPS E F+DM S+V+T +SY+G +GF+ +YY FA+ +FD E
Sbjct: 28 SSGSTKE-AYVTLLYGDEFVLGVRVLGKSIRDTRTARDMVVLVSDGVSNYAKKLLKADGWIVTPISLLENPNQVRPTRFWGVYTKLKIFNMTDYKKVVYLDADTIVVKNIDDLFKCGKFCANLKHSERLNSGVMVVEPSEELFKDMVSKVTTLYSYTGGDQGFLNTYYAGFASARVFDPE 206
BLAST of mRNA_S-ischiensis_contig89.20350.1 vs. uniprot
Match: A0A2I0X7Q3_9ASPA (Hexosyltransferase n=2 Tax=Dendrobium TaxID=37818 RepID=A0A2I0X7Q3_9ASPA) HSP 1 Score: 124 bits (311), Expect = 3.060e-27 Identity = 75/198 (37.88%), Postives = 116/198 (58.59%), Query Frame = 2
Query: 8 GC---LVGMEPVL--LDHEGSSGRKSDVSYVTHLEGHS-TAGVRTLGASVRRSGSLADLVVLVDKGTPHSALRQLHGLGWRVKLVNWSTSGLNAHDLSEGG-YARLLAWTLTEYRRVVLLDQASMVLDNVDDLFQCGPVCAVMEQAELPNPTLIVLEPSWETFRDMASRVSTTFSYSGDVKGFMASYYPDFAACPLFD 580
GC ++G+ V+ L G S +S+ +YVT L G GVR LG S+R +GS D+VVLV G A L GW+V+L++ T+ G Y +L + +T Y++VV LD ++V+ N++DLFQC CA ++ +E N ++V+EPS F+DM S+V++ SY+G +GF+ S+Y +FA LF+
Sbjct: 2 GCSRSILGLLVVVWALTSVGRSSARSEEAYVTLLYGDEFVLGVRVLGKSIRDTGSSKDMVVLVSDGVSDYAKMLLQADGWKVELISLLTNPNQVRPKRFWGVYTKLKIFNMTMYKKVVYLDADTIVVKNIEDLFQCRRFCANLKHSERLNSGVMVVEPSDSLFKDMMSKVNSLPSYTGGDQGFLNSFYGEFANAHLFE 199
BLAST of mRNA_S-ischiensis_contig89.20350.1 vs. uniprot
Match: D8QRS0_SELML (Hexosyltransferase (Fragment) n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8QRS0_SELML) HSP 1 Score: 122 bits (307), Expect = 5.350e-27 Identity = 69/170 (40.59%), Postives = 100/170 (58.82%), Query Frame = 2
Query: 77 SYVTHLEGHS-TAGVRTLGASVRRSGSLADLVVLVDKGTPHSALRQLHGLGWRVKLVNWSTSGLNAHDLSEGG-YARLLAWTLTEYRRVVLLDQASMVLDNVDDLFQCGPVCAVMEQAELPNPTLIVLEPSWETFRDMASRVSTTFSYSGDVKGFMASYYPDFAACPLFD 580
+YVT L G GVR LG S+R +G+ DL VLV G A+R L GW V+ + ++ G Y +L + +T+Y++VV LD ++V+ +++DLFQC CA ++ +E N ++V+EPS E F DM +VST SY+G +GF+ SYYPDF LFD
Sbjct: 1 AYVTLLYGDEFLLGVRVLGKSIRDTGTSKDLAVLVSDGVSMDAIRLLEADGWIVERIELLSNPNQQRPARFWGVYTKLKIFNMTQYQKVVYLDADTIVVKDIEDLFQCQKFCANLKHSERLNSGVMVVEPSAELFDDMLKKVSTLPSYTGGDQGFLNSYYPDFPNAQLFD 170 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig89.20350.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig89.20350.1 >prot_S-ischiensis_contig89.20350.1 ID=prot_S-ischiensis_contig89.20350.1|Name=mRNA_S-ischiensis_contig89.20350.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=427bp MEPVLLDHEGSSGRKSDVSYVTHLEGHSTAGVRTLGASVRRSGSLADLVVback to top mRNA from alignment at S-ischiensis_contig89:163720..172966+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig89.20350.1 ID=mRNA_S-ischiensis_contig89.20350.1|Name=mRNA_S-ischiensis_contig89.20350.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=9247bp|location=Sequence derived from alignment at S-ischiensis_contig89:163720..172966+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig89:163720..172966+ >mRNA_S-ischiensis_contig89.20350.1 ID=mRNA_S-ischiensis_contig89.20350.1|Name=mRNA_S-ischiensis_contig89.20350.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2562bp|location=Sequence derived from alignment at S-ischiensis_contig89:163720..172966+ (Schizocladia ischiensis KU_0333)back to top |