mRNA_S-ischiensis_contig88.20333.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig88.20333.1
Unique NamemRNA_S-ischiensis_contig88.20333.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
BLAST of mRNA_S-ischiensis_contig88.20333.1 vs. uniprot
Match: D7FZ12_ECTSI (Carnitine/acylcarnitine carrier protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ12_ECTSI)

HSP 1 Score: 421 bits (1082), Expect = 2.960e-146
Identity = 207/288 (71.88%), Postives = 238/288 (82.64%), Query Frame = 1
Query:    1 SGLMNFLAGGFGGVCLVLVGHPLDLIKVKLQTGSAYTGMVDAIVKTFQREGLRGFYRGVSAPLTGITPIFATCFWGYDMGQKLVRMANGDEHGSQPLTLGEKMGAGAFSAVPTTALTAPVERVKCLLQIQGEQVARGGSAQYKGMVDCAGKLYRAGGLGSVFKGWEITLIRDVPGSIAYFGVYEGLKISFAGKDGKASDAAILAAGGFAGMANWTVAIPPDVVKSRWQTAPEGTYSGIADLTRALLREEGVGALYRGIGPAMVRAFPANAACFFGVDVAKRVLTKAGM 864
            SG  NFLAGGFGG+CLV+VGHPLDL+KVKLQTG  Y G+ DA  KT Q EG RGFYRGVSAPL G++PIFATCFWGYDMG KL R A G +  ++ ++LGEKM AGAFSA+P TAL APVER+KCLLQIQGE+VARG   +Y GMVDCA KL+  GG+GSVFKGWE+TL+RDVPGS+AYFGVYE LK +FA +DG  S A IL+AGGFAGMA W VAIPPDV+KSRWQTA EGTYS + D+ R LLREEG  ALYRG+ PAM+RAFPANAACFFGVD+AK +L  AG+
Sbjct:   11 SGFANFLAGGFGGMCLVIVGHPLDLLKVKLQTGGQYKGVADAAAKTLQAEGPRGFYRGVSAPLVGVSPIFATCFWGYDMGLKLCRAAKGKDADAK-MSLGEKMLAGAFSALPATALMAPVERIKCLLQIQGEEVARGAKPKYLGMVDCARKLHATGGIGSVFKGWEVTLMRDVPGSVAYFGVYEFLKEAFAAEDGTVSSAGILSAGGFAGMATWAVAIPPDVIKSRWQTAAEGTYSNLGDVLRTLLREEGAAALYRGVAPAMLRAFPANAACFFGVDLAKSILGSAGL 297          
BLAST of mRNA_S-ischiensis_contig88.20333.1 vs. uniprot
Match: A0A835YHN3_9STRA (Carnitine/acylcarnitine carrier protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHN3_9STRA)

HSP 1 Score: 377 bits (969), Expect = 5.810e-129
Identity = 190/290 (65.52%), Postives = 222/290 (76.55%), Query Frame = 1
Query:    1 SGLMNFLAGGFGGVCLVLVGHPLDLIKVKLQTGSAYTGMVDAIVKTFQREGLRGFYRGVSAPLTGITPIFATCFWGYDMGQKLVRMANGDEHGSQPLTLGEKMGAGAFSAVPTTALTAPVERVKCLLQIQGEQVARGGS--AQYKGMVDCAGKLYRAGGLGSVFKGWEITLIRDVPGSIAYFGVYEGLKISFAGKDGKASDAAILAAGGFAGMANWTVAIPPDVVKSRWQTAPEGTYSGIADLTRALLREEGVGALYRGIGPAMVRAFPANAACFFGVDVAKRVLTKAGM 864
            SGL +FL+GGFGGVCLVLVGHPLDLIKVKLQTG+AY G +D   +T + EG  GFYRGVSAPL G+TPIFATCFWGY+MGQ++VR  N  +   Q LT+ E   AG  SA+P T L APVERVKCLLQIQ  + A  G+   +Y GM+DC  +L + GGL SVFKGWE TL+RD+PGS AYFGV   LK  F  + GK SD  IL AGG AGMANW +AIPPDV+KSR QTAPEGTY+G+ D+ R L+R+EG GAL+RGIGPAM RAFPANAACFFGVD+A R L K G+
Sbjct:   16 SGLQSFLSGGFGGVCLVLVGHPLDLIKVKLQTGTAYKGALDVAAQTLKNEGALGFYRGVSAPLVGVTPIFATCFWGYEMGQRVVRAVN-KKPVDQDLTIAEHAVAGGLSALPATVLMAPVERVKCLLQIQSNEAAAVGAKGTRYTGMIDCGMQLMKTGGLSSVFKGWEATLVRDIPGSAAYFGVNVALKKQFKDERGKVSDIGILTAGGVAGMANWAIAIPPDVIKSRLQTAPEGTYTGMLDVYRTLMRQEGAGALFRGIGPAMTRAFPANAACFFGVDIANRFLEKLGI 304          
BLAST of mRNA_S-ischiensis_contig88.20333.1 vs. uniprot
Match: K3X7E3_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X7E3_GLOUD)

HSP 1 Score: 339 bits (870), Expect = 7.060e-114
Identity = 169/295 (57.29%), Postives = 214/295 (72.54%), Query Frame = 1
Query:    1 SGLMNFLAGGFGGVCLVLVGHPLDLIKVKLQTGSA--------YTGMVDAIVKTFQREGLRGFYRGVSAPLTGITPIFATCFWGYDMGQKLVRMANGDEHGSQPLTLGEKMGAGAFSAVPTTALTAPVERVKCLLQIQGEQVARGGSAQYKGMVDCAGKLYRAGGLGSVFKGWEITLIRDVPGSIAYFGVYEGLKISFAGKDGKASDAAILAAGGFAGMANWTVAIPPDVVKSRWQTAPEGTYSGIADLTRALLREEGVGALYRGIGPAMVRAFPANAACFFGVDVAKRVLTKAG 861
            SGL++F+ GGFGGVCLV VGHP+DLIKV +QT           YTG +D   K   ++GL G YRG+SAPL G+TPIFA CFWG DMG+ + R  +G    +QPL++G+ M AG FSA+P TA+ AP ER+KCLLQIQ + VARG    Y GMVDCA KLY+ GG+ S+F+GWE TL+RDVPGS+ YFG +E +K S   +  +AS   +  AGGFAG+ NWT+AIP DV+KSR QTAPEGTY GIA   + L++EEG GAL++G+GPA+ RAFPANAACF GV+ +K+ L   G
Sbjct:   12 SGLVSFITGGFGGVCLVAVGHPMDLIKVNIQTMEKPKPGQPPMYTGAMDCARKIVAKDGLTGLYRGMSAPLVGVTPIFAVCFWGNDMGKLIARKVSGTPD-TQPLSMGQLMFAGGFSAIPATAVMAPGERIKCLLQIQAQAVARGEPKLYDGMVDCAKKLYKTGGVSSIFRGWEATLLRDVPGSVGYFGGFEAIKRSLTPEGKEASAFRVFVAGGFAGIINWTIAIPADVLKSRIQTAPEGTYRGIAHCYQVLMKEEGAGALFKGMGPALARAFPANAACFLGVEFSKKFLATFG 305          
BLAST of mRNA_S-ischiensis_contig88.20333.1 vs. uniprot
Match: A0A5D6Y6E3_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y6E3_9STRA)

HSP 1 Score: 339 bits (869), Expect = 9.040e-114
Identity = 171/296 (57.77%), Postives = 212/296 (71.62%), Query Frame = 1
Query:    1 SGLMNFLAGGFGGVCLVLVGHPLDLIKVKLQTGSA--------YTGMVDAIVKTFQREGLRGFYRGVSAPLTGITPIFATCFWGYDMGQKLVRMA-NGDEHGSQPLTLGEKMGAGAFSAVPTTALTAPVERVKCLLQIQGEQVARGGSAQYKGMVDCAGKLYRAGGLGSVFKGWEITLIRDVPGSIAYFGVYEGLKISFAGKDGKASDAAILAAGGFAGMANWTVAIPPDVVKSRWQTAPEGTYSGIADLTRALLREEGVGALYRGIGPAMVRAFPANAACFFGVDVAKRVLTKAG 861
            SGL++FL GGFGGVCLV VGHP+DLIKV +QT           YTG +D   K   ++G  G YRG+SAPL G+TPIFA CFWG DMG+ + R A +  EH  Q L++G+ M AG FSA+P T + AP ER+KCLLQIQ + V+RG  A Y GMVDCA KLY+ GG+ S+F+GWE TL+RDVPGSI YFG +E +K +   KD +AS   +  AGGFAGM NWT+AIP DV+KSR QTAPEGTY GIA     L++EEG GAL++G+ PA+ RAFPANAACF GV+ +K+ L   G
Sbjct:    9 SGLVSFLTGGFGGVCLVAVGHPMDLIKVNIQTMEKPAPGQPPMYTGAIDCARKLVAKDGFTGLYRGMSAPLVGVTPIFAVCFWGNDMGKLIARKAMSTPEH--QQLSMGQLMFAGGFSAIPATVVMAPGERIKCLLQIQAQAVSRGEPALYNGMVDCAKKLYKTGGISSIFRGWEATLLRDVPGSIGYFGGFEAIKRALTPKDSEASAFRVFLAGGFAGMINWTIAIPADVIKSRIQTAPEGTYRGIAHCYEVLMKEEGAGALFKGMAPALARAFPANAACFLGVEFSKKFLASFG 302          
BLAST of mRNA_S-ischiensis_contig88.20333.1 vs. uniprot
Match: A0A1Y1XXM4_9FUNG (Mitochondrial carrier n=2 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1XXM4_9FUNG)

HSP 1 Score: 335 bits (859), Expect = 4.330e-112
Identity = 170/287 (59.23%), Postives = 216/287 (75.26%), Query Frame = 1
Query:    1 SGLMNFLAGGFGGVCLVLVGHPLDLIKVKLQTGSAYTGMVDAIVKTFQREGLRGFYRGVSAPLTGITPIFATCFWGYDMGQKLVRMANGDEHGSQPLTLGEKMGAGAFSAVPTTALTAPVERVKCLLQIQGEQVARGGSAQYKGMVDCAGKLYRAGGLGSVFKGWEITLIRDVPGSIAYFGVYEGLKISFAGKDGK--ASDAAILAAGGFAGMANWTVAIPPDVVKSRWQTAPEGTYSGIADLTRALLREEGVGALYRGIGPAMVRAFPANAACFFGVDVAKRVLTK 855
            SG+ +FL+GGFGG+CLV  GHPLDLIKV+LQT +AYTG+VD   KT  R+G+RG YRG+S PL G+TPIFATCFWGYDMG+KL   A G +  ++ L++G+ + AG FSA+P T L AP ER+KCLLQIQG+    GG  +YKG +D A  +++ GG+ S+F+G   TLIRDVPGS+AYFG YE  K + +   G    S  A+L AGG AGMANW VAIPPDV+KSR QTAPEGTY G+AD+   L+R EG GAL+RG+GPAM+RAFPANAACF GV+ + + + +
Sbjct:   31 SGVKSFLSGGFGGICLVAAGHPLDLIKVRLQTSNAYTGIVDCFKKTIARDGIRGLYRGMSTPLIGVTPIFATCFWGYDMGKKLQIWALGLDP-NEKLSMGQILFAGGFSAIPATLLMAPTERIKCLLQIQGDA---GGVQKYKGPIDAAIGIFKEGGVRSLFRGTGATLIRDVPGSVAYFGAYEFAKAALSDDAGPDTLSPMAVLVAGGLAGMANWAVAIPPDVLKSRLQTAPEGTYKGVADVFTHLIRTEGPGALFRGLGPAMLRAFPANAACFLGVEASLKFMNQ 313          
BLAST of mRNA_S-ischiensis_contig88.20333.1 vs. uniprot
Match: H3G8V3_PHYRM (Uncharacterized protein n=20 Tax=Peronosporaceae TaxID=4777 RepID=H3G8V3_PHYRM)

HSP 1 Score: 332 bits (850), Expect = 1.150e-110
Identity = 166/294 (56.46%), Postives = 206/294 (70.07%), Query Frame = 1
Query:    1 SGLMNFLAGGFGGVCLVLVGHPLDLIKVKLQTGSA--------YTGMVDAIVKTFQREGLRGFYRGVSAPLTGITPIFATCFWGYDMGQKLVRMANGDEHGSQPLTLGEKMGAGAFSAVPTTALTAPVERVKCLLQIQGEQVARGGSAQYKGMVDCAGKLYRAGGLGSVFKGWEITLIRDVPGSIAYFGVYEGLKISFAGKDGKASDA---AILAAGGFAGMANWTVAIPPDVVKSRWQTAPEGTYSGIADLTRALLREEGVGALYRGIGPAMVRAFPANAACFFGVDVAKRVL 849
            SG+++F+ GGFGGVCLV  GHPLDLIKV +QT +         Y   VD   K   ++G RG YRG+SAPL G+TPIFATCFWGYDMG KL+ +    +  + PL++G+ M AG FSA+P T + AP ER+KCLLQIQ + V RG    Y GM+DCA KLYR GGL S+F+GWE TL+RDVPGS+ YFG +E +K     K    SD     +  AGGFAG+ NW +AIPPDV+KSR QTAPEGTY GI    + L++EEG GAL+ G+GPAM RAFPANAACF GV+ +K+ L
Sbjct:   21 SGVVSFITGGFGGVCLVATGHPLDLIKVNMQTQAKPLPGQQPMYANAVDCARKMVAKDGFRGLYRGMSAPLVGVTPIFATCFWGYDMG-KLIAIKTSGQSPTTPLSMGQIMFAGGFSAIPATVVMAPGERIKCLLQIQAQAVERGEPKLYDGMIDCAKKLYRTGGLSSIFRGWEATLLRDVPGSVGYFGGFEAIKRGLTPKGKDPSDLNAFRVFVAGGFAGIINWVIAIPPDVIKSRIQTAPEGTYRGIVHCFQVLMKEEGPGALFNGVGPAMARAFPANAACFLGVEFSKKFL 313          
BLAST of mRNA_S-ischiensis_contig88.20333.1 vs. uniprot
Match: A0A8K1FMJ5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FMJ5_PYTOL)

HSP 1 Score: 330 bits (846), Expect = 3.100e-110
Identity = 167/297 (56.23%), Postives = 209/297 (70.37%), Query Frame = 1
Query:    1 SGLMNFLAGGFGGVCLVLVGHPLDLIKVKLQTGSA--------YTGMVDAIVKTFQREGLRGFYRGVSAPLTGITPIFATCFWGYDMGQKLVRMANGDEHGSQPLTLGEKMGAGAFSAVPTTALTAPVERVKCLLQIQGEQVARGGSAQYKGMVDCAGKLYRAGGLGSVFKGWEITLIRDVPGSIAYFGVYEGLKISFAGKDG-KASDAAILAAGGFAGMANWTVAIPPDVVKSRWQTAPEGTYSGIADLTRALLREEGVGALYRGIGPAMVRAFPANAACFFGVDVAKRVLTKAGM 864
            SGL++F++GGFGGVCLV  GHP+DLIKV +QT           YTG +D   K   ++GL G YRG+SAPL G+TPIFA CFWG DMG+ + R A G    SQPL+ G+ M AG FSA+P T + AP ER+KCLLQIQ + + RG    Y GMVDCA KLYR GG+ SVF+GWE TL+RDVP S+ YFG YE +K     K   + S   ++ AGG AGM NWT+A+P DV+KSR QTAPEGTY G+A   + L++EEG GAL++G+GPA+ RAFPANAACF GV+ +K+ L   GM
Sbjct:   11 SGLLSFISGGFGGVCLVATGHPMDLIKVNIQTMEKPKPGQPPMYTGAMDCARKIVAKDGLTGLYRGMSAPLVGVTPIFAVCFWGNDMGKLIARTAMGTPE-SQPLSTGQLMFAGGFSAIPATVVMAPGERIKCLLQIQAQAIERGEPKLYDGMVDCAKKLYRTGGISSVFRGWEATLLRDVPASVGYFGGYEVIKRVLTPKGSTELSPVNVVVAGGLAGMLNWTIAMPADVLKSRIQTAPEGTYRGVAHCYQVLMKEEGAGALFKGVGPALARAFPANAACFLGVEFSKKFLMYLGM 306          
BLAST of mRNA_S-ischiensis_contig88.20333.1 vs. uniprot
Match: A0A1Y1WU54_9FUNG (Mitochondrial carrier n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1WU54_9FUNG)

HSP 1 Score: 330 bits (845), Expect = 5.390e-110
Identity = 166/288 (57.64%), Postives = 212/288 (73.61%), Query Frame = 1
Query:    1 SGLMNFLAGGFGGVCLVLVGHPLDLIKVKLQTGSAYTGMVDAIVKTFQREGLRGFYRGVSAPLTGITPIFATCFWGYDMGQKLVRMANGDEHGSQPLTLGEKMGAGAFSAVPTTALTAPVERVKCLLQIQGEQVARGGSAQYKGMVDCAGKLYRAGGLGSVFKGWEITLIRDVPGSIAYFGVYEGLKISFAGKDGK--ASDAAILAAGGFAGMANWTVAIPPDVVKSRWQTAPEGTYSGIADLTRALLREEGVGALYRGIGPAMVRAFPANAACFFGVDVAKRVLTKA 858
            SG+ +FL+GGFGG+CLV  GHPLDLIKV+LQT +AYTG+VD   KT  R+G+RG YRG+S PL G+TPIFATCFWGYDMG+KL   A G +  ++ L++ + + AG FSA+P T L  P ER+KCLLQIQGE    GG  +YKG +D A  +++ GG+ S+F+G   TL+RD+PGS+AYFG YE  K + +        S  A+L AGG AGMANW VAIPPDV+KSR QTAPEGTY G+ D+   L+R EG  AL+RG+GPAM+RAFPANAACF GV+ + +V+  A
Sbjct:   29 SGVKSFLSGGFGGICLVAAGHPLDLIKVRLQTSNAYTGIVDCFKKTLARDGIRGLYRGMSTPLIGVTPIFATCFWGYDMGKKLQIWALGLDPNAK-LSMNQILFAGGFSAIPATLLMTPTERIKCLLQIQGEA---GGVQKYKGPIDAAVGIFKEGGMRSLFRGTGATLLRDIPGSVAYFGAYEYAKAALSDNSNPDTLSPVAVLVAGGLAGMANWAVAIPPDVLKSRLQTAPEGTYKGVMDVFTHLMRTEGPSALFRGLGPAMLRAFPANAACFLGVEASLKVMNSA 312          
BLAST of mRNA_S-ischiensis_contig88.20333.1 vs. uniprot
Match: A0A2D4CG24_PYTIN (Mitochondrial carnitine/acylcarnitine carrier protein putative n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CG24_PYTIN)

HSP 1 Score: 328 bits (841), Expect = 1.660e-109
Identity = 170/297 (57.24%), Postives = 207/297 (69.70%), Query Frame = 1
Query:    1 SGLMNFLAGGFGGVCLVLVGHPLDLIKVKLQTGSA--------YTGMVDAIVKTFQREGLRGFYRGVSAPLTGITPIFATCFWGYDMGQKLVRMANGDEHGSQPLTLGEKMGAGAFSAVPTTALTAPVERVKCLLQIQGEQVARGGSAQYKGMVDCAGKLYRAGGLGSVFKGWEITLIRDVPGSIAYFGVYEGLKISFAGKDG-KASDAAILAAGGFAGMANWTVAIPPDVVKSRWQTAPEGTYSGIADLTRALLREEGVGALYRGIGPAMVRAFPANAACFFGVDVAKRVLTKAGM 864
            SGL +FL GG GGVCLV VGHP+DL+KV LQT           YTG +D   K   R+G  G YRG+SAPL G+TPIFA CFWG DMG+ + R A G    SQPL+  + M AG FSA+P T + AP ER+KCLLQIQ + + RG    Y GMVDCA KLYR GGL SVF+GWE TL+RDVP S+ YFG YE +K +   KD  + S   ++ AGG AGM NW++AIP DV+KSR QTAPEGTY GI    + L++EEG GAL++G+GPA+ RAFPANAACF GV+ +K+ LT  GM
Sbjct:    9 SGLKSFLTGGIGGVCLVAVGHPMDLVKVNLQTMEKPKPGQPPLYTGAMDCARKIVARDGPAGLYRGMSAPLVGVTPIFAVCFWGNDMGKLIARKACGTPD-SQPLSTNQLMFAGGFSAIPATVVMAPGERIKCLLQIQAQAMDRGEPKLYDGMVDCAKKLYRTGGLASVFRGWEATLLRDVPASVGYFGGYEVIKRAMTPKDSTELSPIRVVTAGGLAGMLNWSIAIPADVIKSRIQTAPEGTYRGIVHCYQVLMKEEGAGALFKGMGPALFRAFPANAACFLGVEFSKKFLTYLGM 304          
BLAST of mRNA_S-ischiensis_contig88.20333.1 vs. uniprot
Match: A0A3M6VB73_9STRA (Uncharacterized protein n=3 Tax=Peronosporaceae TaxID=4777 RepID=A0A3M6VB73_9STRA)

HSP 1 Score: 324 bits (831), Expect = 1.590e-107
Identity = 171/322 (53.11%), Postives = 212/322 (65.84%), Query Frame = 1
Query:    1 SGLMNFLAGGFGGV----------------------------CLVLVGHPLDLIKVKLQT------GSA--YTGMVDAIVKTFQREGLRGFYRGVSAPLTGITPIFATCFWGYDMGQKLVRMANGDEHGSQPLTLGEKMGAGAFSAVPTTALTAPVERVKCLLQIQGEQVARGGSAQYKGMVDCAGKLYRAGGLGSVFKGWEITLIRDVPGSIAYFGVYEGLKISFAGKDGKASDAA---ILAAGGFAGMANWTVAIPPDVVKSRWQTAPEGTYSGIADLTRALLREEGVGALYRGIGPAMVRAFPANAACFFGVDVAKRVL 849
            SG+++FL GGFGGV                            CLV  GHPLDLIKV +QT      G A  YT  +D   K   ++G+RG YRG+SAPL G+TPIFATCFWGYDMG KL+ +   ++  + PL++G+ M AG FSA+P T + AP ER+KCLLQIQ + V RG    Y GMVDCA KLYR GGL S+F+GWE TL+RDVPGS+ YFG +E +K     KD   SD     +  AGGFAG+ NW +AIPPDV+KSR QTAPEGTY GIA   + L+++EG GAL+ G+GPAM RAFPANAACF GV+ +K+ L
Sbjct:   11 SGVVSFLTGGFGGVFNSSNHLNTIVPYLLYIYTNNYIVYIGMCLVATGHPLDLIKVNMQTQPKPLLGQAPMYTNAIDCARKMIAKDGIRGLYRGMSAPLVGVTPIFATCFWGYDMG-KLIAIKASNQSPTAPLSMGQIMFAGGFSAIPATVIMAPGERIKCLLQIQAQAVERGEPKLYNGMVDCAKKLYRTGGLSSIFRGWEATLLRDVPGSVGYFGGFEAIKRGLTPKDKNPSDLNAFHVFVAGGFAGVINWVIAIPPDVIKSRIQTAPEGTYRGIAHCFQVLMKQEGPGALFTGVGPAMARAFPANAACFLGVEFSKKFL 331          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig88.20333.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZ12_ECTSI2.960e-14671.88Carnitine/acylcarnitine carrier protein n=1 Tax=Ec... [more]
A0A835YHN3_9STRA5.810e-12965.52Carnitine/acylcarnitine carrier protein n=1 Tax=Tr... [more]
K3X7E3_GLOUD7.060e-11457.29Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A5D6Y6E3_9STRA9.040e-11457.77Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A1Y1XXM4_9FUNG4.330e-11259.23Mitochondrial carrier n=2 Tax=Basidiobolus meristo... [more]
H3G8V3_PHYRM1.150e-11056.46Uncharacterized protein n=20 Tax=Peronosporaceae T... [more]
A0A8K1FMJ5_PYTOL3.100e-11056.23Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A1Y1WU54_9FUNG5.390e-11057.64Mitochondrial carrier n=1 Tax=Basidiobolus meristo... [more]
A0A2D4CG24_PYTIN1.660e-10957.24Mitochondrial carnitine/acylcarnitine carrier prot... [more]
A0A3M6VB73_9STRA1.590e-10753.11Uncharacterized protein n=3 Tax=Peronosporaceae Ta... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig88contigS-ischiensis_contig88:527582..539343 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score427.6
Seed ortholog evalue4.7e-117
Seed eggNOG ortholog2880.D7FZ12
Preferred nameCRC1
KEGG koko:K15109
KEGG TC2.A.29.8
KEGG Pathwayko04714,map04714
GOsGO:0000902,GO:0000904,GO:0002064,GO:0003382,GO:0003674,GO:0005215,GO:0005476,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006082,GO:0006629,GO:0006631,GO:0006810,GO:0006811,GO:0006812,GO:0006839,GO:0006844,GO:0006873,GO:0006875,GO:0007275,GO:0007424,GO:0008150,GO:0008152,GO:0008324,GO:0008519,GO:0009653,GO:0009888,GO:0009987,GO:0010960,GO:0010961,GO:0015075,GO:0015095,GO:0015101,GO:0015226,GO:0015291,GO:0015297,GO:0015318,GO:0015651,GO:0015693,GO:0015695,GO:0015696,GO:0015697,GO:0015838,GO:0015879,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0019752,GO:0019866,GO:0022804,GO:0022857,GO:0022890,GO:0030001,GO:0030003,GO:0030154,GO:0030855,GO:0031090,GO:0031224,GO:0031966,GO:0031967,GO:0031975,GO:0032501,GO:0032502,GO:0032787,GO:0032989,GO:0034220,GO:0035002,GO:0042044,GO:0042045,GO:0042592,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045016,GO:0046873,GO:0048468,GO:0048731,GO:0048856,GO:0048869,GO:0048878,GO:0050801,GO:0051179,GO:0051181,GO:0051234,GO:0055065,GO:0055080,GO:0055082,GO:0055085,GO:0060429,GO:0060541,GO:0065007,GO:0065008,GO:0070633,GO:0070838,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072337,GO:0072349,GO:0072488,GO:0072503,GO:0072507,GO:0072511,GO:0098655,GO:0098660,GO:0098662,GO:0098771,GO:1902603,GO:1903830,GO:1990542,GO:1990616
EggNOG free text desc.mitochondrial transport
EggNOG OGsKOG0758@1,KOG0758@2759
COG Functional cat.U
BiGG ReactioniMM904.YOR100C,iND750.YOR100C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02000
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptioncarnitine/acylcarnitine carrier protein
Ec32 orthologEc-20_001140.1
Exons8
Model size870
Cds size861
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817359.0328457-CDS-S-ischiensis_contig88:527581..5277231622817359.0328457-CDS-S-ischiensis_contig88:527581..527723Schizocladia ischiensis KU_0333CDSS-ischiensis_contig88 527582..527723 -
1695741054.7322435-CDS-S-ischiensis_contig88:527581..5277231695741054.7322435-CDS-S-ischiensis_contig88:527581..527723Schizocladia ischiensis KU_0333CDSS-ischiensis_contig88 527582..527723 -
1622817359.049334-CDS-S-ischiensis_contig88:529580..5296801622817359.049334-CDS-S-ischiensis_contig88:529580..529680Schizocladia ischiensis KU_0333CDSS-ischiensis_contig88 529581..529680 -
1695741054.7483864-CDS-S-ischiensis_contig88:529580..5296801695741054.7483864-CDS-S-ischiensis_contig88:529580..529680Schizocladia ischiensis KU_0333CDSS-ischiensis_contig88 529581..529680 -
1622817359.0652554-CDS-S-ischiensis_contig88:531086..5311901622817359.0652554-CDS-S-ischiensis_contig88:531086..531190Schizocladia ischiensis KU_0333CDSS-ischiensis_contig88 531087..531190 -
1695741054.7580962-CDS-S-ischiensis_contig88:531086..5311901695741054.7580962-CDS-S-ischiensis_contig88:531086..531190Schizocladia ischiensis KU_0333CDSS-ischiensis_contig88 531087..531190 -
1622817359.079146-CDS-S-ischiensis_contig88:531953..5320781622817359.079146-CDS-S-ischiensis_contig88:531953..532078Schizocladia ischiensis KU_0333CDSS-ischiensis_contig88 531954..532078 -
1695741054.768015-CDS-S-ischiensis_contig88:531953..5320781695741054.768015-CDS-S-ischiensis_contig88:531953..532078Schizocladia ischiensis KU_0333CDSS-ischiensis_contig88 531954..532078 -
1622817359.092021-CDS-S-ischiensis_contig88:534588..5347331622817359.092021-CDS-S-ischiensis_contig88:534588..534733Schizocladia ischiensis KU_0333CDSS-ischiensis_contig88 534589..534733 -
1695741054.7775981-CDS-S-ischiensis_contig88:534588..5347331695741054.7775981-CDS-S-ischiensis_contig88:534588..534733Schizocladia ischiensis KU_0333CDSS-ischiensis_contig88 534589..534733 -
1622817359.1041427-CDS-S-ischiensis_contig88:536442..5365431622817359.1041427-CDS-S-ischiensis_contig88:536442..536543Schizocladia ischiensis KU_0333CDSS-ischiensis_contig88 536443..536543 -
1695741054.7897553-CDS-S-ischiensis_contig88:536442..5365431695741054.7897553-CDS-S-ischiensis_contig88:536442..536543Schizocladia ischiensis KU_0333CDSS-ischiensis_contig88 536443..536543 -
1622817359.117567-CDS-S-ischiensis_contig88:537899..5380151622817359.117567-CDS-S-ischiensis_contig88:537899..538015Schizocladia ischiensis KU_0333CDSS-ischiensis_contig88 537900..538015 -
1695741054.80224-CDS-S-ischiensis_contig88:537899..5380151695741054.80224-CDS-S-ischiensis_contig88:537899..538015Schizocladia ischiensis KU_0333CDSS-ischiensis_contig88 537900..538015 -
1622817359.1308792-CDS-S-ischiensis_contig88:539306..5393341622817359.1308792-CDS-S-ischiensis_contig88:539306..539334Schizocladia ischiensis KU_0333CDSS-ischiensis_contig88 539307..539334 -
1695741054.8121262-CDS-S-ischiensis_contig88:539306..5393341695741054.8121262-CDS-S-ischiensis_contig88:539306..539334Schizocladia ischiensis KU_0333CDSS-ischiensis_contig88 539307..539334 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817359.1455603-UTR-S-ischiensis_contig88:539334..5393431622817359.1455603-UTR-S-ischiensis_contig88:539334..539343Schizocladia ischiensis KU_0333UTRS-ischiensis_contig88 539335..539343 -
1695741054.825752-UTR-S-ischiensis_contig88:539334..5393431695741054.825752-UTR-S-ischiensis_contig88:539334..539343Schizocladia ischiensis KU_0333UTRS-ischiensis_contig88 539335..539343 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig88.20333.1prot_S-ischiensis_contig88.20333.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig88 527582..539334 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig88.20333.1

>prot_S-ischiensis_contig88.20333.1 ID=prot_S-ischiensis_contig88.20333.1|Name=mRNA_S-ischiensis_contig88.20333.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=287bp
MNFLAGGFGGVCLVLVGHPLDLIKVKLQTGSAYTGMVDAIVKTFQREGLR
GFYRGVSAPLTGITPIFATCFWGYDMGQKLVRMANGDEHGSQPLTLGEKM
GAGAFSAVPTTALTAPVERVKCLLQIQGEQVARGGSAQYKGMVDCAGKLY
RAGGLGSVFKGWEITLIRDVPGSIAYFGVYEGLKISFAGKDGKASDAAIL
AAGGFAGMANWTVAIPPDVVKSRWQTAPEGTYSGIADLTRALLREEGVGA
LYRGIGPAMVRAFPANAACFFGVDVAKRVLTKAGMS*
back to top

mRNA from alignment at S-ischiensis_contig88:527582..539343-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig88.20333.1 ID=mRNA_S-ischiensis_contig88.20333.1|Name=mRNA_S-ischiensis_contig88.20333.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=11762bp|location=Sequence derived from alignment at S-ischiensis_contig88:527582..539343- (Schizocladia ischiensis KU_0333)
TCCGGACTCATGAACTTCCTGGCGGGAGGGTTTGGAGGTGAGCCGGGAGG CGTGCGACTGACACCTTTGTTATCCCTTTTACCCCTGGGGTCTGTACAAT CATAGGGTTTTAGTGTGTCCAATTTCGCAGGGGTAGAAGAGTTAAAATCG TGAGAGTGCAAGTAGTGTTTGGCTGAAGGATTCGCCGGTGTCATGTACTT CGAAGTATTCTCCGAAGCACAAGTAACCAGCGAATGCAAGTGCACAGCGG CATAGCCTGGCGTTTTCTCGCTTGCTTGCTCGATCCGGGCCTATTGGGAG AGTAGGTACAGTAATAGTGTGTGGCTGAAGGATTCGCCGGTGTCATACAC TCTGAAGCAGAAGTATATATACTACGCAGCATGTACTCACATTTTGCTTG CCGTAGTCCCGAGACCATTGATCATTCGCCTCGATCGAGACGGAGCAAGT GAACAGTGAATGCAAGTGCGCAGCAGCATAGTCACGCGTTTGCTCGCTTG CAAACTTGACCCCCCCCCCCCCCAGCAACTTGGGTCATTTGCCAATGGTC AGTCCCGGCCGAATCACCGCCGCCGCTGCCACCGCCGCCGCCACCACCGC CCAGTGGTGGAAAATCTAAGCAAATAACCCATATATCGACAGTACTGGTA TATCTATCTATCGATAGTCGATATTCGATGGTTTGACCAACACTATATCC AACTAGTTAGTAACGCCACCCACAAAATCAGTCCAGCCCGATGACTATCT ACTGATTGATATTGCGTCACTGCCACCGCCTCTGGTTGTGCATCTGCCCT GGTCAGGCGTGGGTCTGGTGCTGGTGGGAAACCCCCTGGACCTGATCAAG GTCACTAGTGGTAGCTACTTGTAAGCCTAATTCACCTCCAAGTGCCAACC CTGCTGCCGCCACCGCCACCTCTGGTTGTATGTACCATAATCGTTGGAGA GATCTTGCCCCCCCACGCCAATTTTCGGGAGAACTGTTCCCACCGAATAC TGGTCGGATTCGCGCGGGAAAACTCGGACAATCTCCCTCAGGACCCGGGG GAACTTTTCGGAGAGTTTTAGGGACAATTCCGGACCTTCCCGGCTAGAAA TATTCCCCCGCAAATCATCCCGTGGGGGCAAAATCTCGCCGACGATTACG GTATGTACATCTGCATGCCTGGCTAGGCGTGTGACTGGTGCTGGTGGGAC ACCCCGTGGACCTGATCAACTAGGGGTAATTGGACATAAAAAATTAGGCT AGTTAGGCCCTAATTAGCCTCTAAGTGCCAACCCTGGCCACCACCGCCTC TGGGTGTGTGTACATCTTCCCTGGGCAGGCGTGTGTCTGGTGCTGGTGGG ACACCCCCTGGACCTGATCAAGGTCAAGCTGCAGACCGGGTCGGCGTACA CGGGTATGGTGGACGCCATCGTCAAGACCTTTCAGAGGGAAGGGGTGAGA TGTGTTTAGGTACTCATGTTCGGACGAGTTTCCTCGTCTTGGTCCATCTC TCTCTCCCTCTTTTCCCTCTCTCTCCTCTCTCCCTCGAGCTACTTACGCA CGCTCGCACACTCACAAACCCAGTCGCTGTTCCTCTCTCTCCCTCCGTCC TTGCCTCCCCCCCTCTGTCCCTCCGCGCCTGCTTGCTCCGAACACGGTAA CACGCACACGCAAACATCGCACACGTACTATCTCTTAAACACAATAGCTG TCCCTCCCTCTCCCTCCCTCCCTCCCTGCCTCCCTCCCTCCCTCCCTCCG CCCCTGCTTGCTCCGACCGCAGTCACACACACAAACACACACACACGTCA CACACGTACTCTTATCTCACACACGCTCAAGCACAACACAGTCTGCATAG CCACTAATACGAGAACACTCAATCTCTCACACGTGCGACTGTACCTAGCT ATGAGGTACAATTTTTAATTATTTTGATGGCGTGCGAGTTCCAATTCATG TGAATCACCGCACATACTGCGCTCTCTCGCTCTCGCACACCCACCAGCCC TCCCCCCGGGCCCTTCTTCCTTCCCTCCCCGTCGCTTTCTGTCGCTCCCT TCCTCCCTGCCTCCCCCCCCCCCTCTCTGACACGCACACATATACACACG CTCACAAACACGCGCACACACACACACATGCGCACACGCGCACATACACA CGCACGCGCACGACACGCACATGCGCGCGCGCGCACACACACACGCACAC GCACACACACACACACGCACACACGCACGCACACACACCCCGATGGCACA CGGTGATGTGATGTGATGTCAAACTACTGTTCTTTTGTGTGCACATCACA TCACATCACATCGCACACATCACATCACACGGATGACACGATGTGATGTG ATGTGATGTGGTGTCAAACTACTGTGCTTTTGTGCGCACCTCACATCACA TCACATCACACACACACACGCCGTCTTGCTGGCCTCCATCACATGACACG GATGACACAATGCGATGTGATGTGATGTGATGTCAAACTACTGTGCTTTT GTGTGCGCATCACATCACATCACACCACATCACATCGTTCGGAGCAGCTG CGAGGCTTCTACCGGGGCGTCTCCGGGCCGCTCACGGGCGATGTGATGCG ATGTCTAACTACTGTGCTTTTGTGTGCACATCACATCACGTCGCACACAC ACACACACACACACACACACACACACACACACACCCACACCGATGGCACC ATGTGATGTGATGTGATGTGCAACTGCTGTGCTTTTGATGTGATGTGATG TCCAACTACTGTGCTTTTGTGTGCACATCACATCACATCATTCGGAGCAG CTGCGGGGTTTCTACCGAGGCGTCTCCGCTCCACTCACGGGCATCACCCC CATATTCGCTACCTGCTTTTGGGGCTACGACATGGGTCAGAAGCTCGTTA GGTGAGCACTTGGAGGTTAATCAGGGCCTAGTTAGCCTTCATCTTATGTC TAGTTACCCCCATACTTGCCACCTGCTTTTGGGGCTACGGCATGGGCCAG AAGCTCGCTAGGTGAGCCTAGCTAGCCGTCATTTTCGGTCTAACTACCCC TAATTTTCTCTAAATAAGGGCCTAGAAGGGCATCACCCCCATATTTGCCA CGTGCTTTTGGGGATACGACATGGGCCAGAAGCTCGTTAGGTGAGCATTC CCTGGCCTGTCCCGATCGTGCCCCGACCGGCACCTCGACCGCTCGGCCCT GCGATCTGGCGGCATTTCTCACCACTGTAGTGTGGGTATTCGTAGGTAGT TTTGAACCTACAGTTACTACAAAGTACATTGAGCAGTATGTGCATAGTTC AGCCACAACGGTCATTGCGTCGGGTAGTGTTAAACGTATAGGTGGGCAAG CCCAATCCTTTGTTGGCAACACGCACGTCTGCTGCCTCGGCAACACGCAC CGCATTCTGCCGGAGAGTTGAAGATTTTGCCCTGCCGGGACGATTTTCGG GAGGATGTTTCTCGCCGCACAAGGCGACGAATTGTTCCGAACGTCCCTCG GACTACAGTAGTAGTCCTCCAGGCCGCGAGGGAATTTTTTCCCATGGACA TAGACCGATCGATCACTGATCAGTTTGACCGGCCACCCCGCCCTTGACCG GAATAAAAATCGGCTCGGACATGATCGTGAGTGATGGTATATATAAGCAA ATCAACCTATTTATCGGCAGTATTGATCTACTGTCTATGTCTATCGATAC GCGATATTCGATAGTTTGACCCACACTGAATCCAAGTAGTTACCTAGGAA TGCCACCCACAAAATCAGTCGAGCCCGATGGCTATCTACTGATTGATATT CCGTCACTGATCATCGTCAGGATGGCCAGCGGGGACGAACACTCTACACA GCCCTTGACCCTGGGCGAGAAGGTGGCAGCAGGGGCATTCGCTTCGACCT AAAATGAGGGCAAAATTAAGTTAAACTGACGGCAAAATTAAGGTAAAAAT TATCCTCGAAGTGCCAAGTCTGGTCAGGATGGCCAACGGGGGCGAGCTAG CCAGCCCCTGAGTTGGACACATACCGATCGATCGCTGATCGGTTTGACCG GCCACCCCGCCCGACCCAAATACAATCAACCACTAGCACGAGAACACTCA ATCTCACACGCGCGATACAACTGATATGAATCACCATCACTGATGATGGT CAGGATGGCCAACGGGGACGAGCACTCTAGCCAGCCCCTGACCCTGGGTG AGAAGATGGCCGCAGGCTTCTTCAATTAGACCTAGAGTGAAGGCTAATTA GGCCCTAGTTTACGCTGATTAGGGCCTAATTTACGCTAATTAGGCCCTAA TTAACCTCTAAGTGCCAACTCTGGTCAGGATGGCCAACGGGGATGAGCAC GGCAGTAAGACCCTGACCCTGGGCGCGAAGATGCCGGGGGCGCCTTCAAT CAGAAGACGTAAATGAAGGCCAGTTAGACCTAAAATGAAGGCTAATTAAG CCCTGATTAAACTCTAATCTTCAGGATGGCCAATGGGGACAAGCACGGCA GTCAACCCATGACCCTGGGCGAGAAGATGGCGACCGATCGATCACTTATC AGTTTGACCGGCCACCCCGCCCGACCCACGCACAACTCGGCTCGGACCAC CATTGTTCAGAATGGCCAACGGAGATGAGCACGGTAGCCAGCCCCTGACC CTGGGCGAGAAGATGGGGGCGGGCGCCTTCTCCGCCGTACCCACCACCGC TCTAACGGCACCAGTGGAGCGCGTCAAGTGCCTCCTGCAGATCCAGGGGG AGCAGGTGAGTACGTCAGTCACGTATGTGGCAGCGATGGAATATCTAAGC AAATCAACCTATTTATCAGCAAATCAACCTATTTGTCAACGGTACTGATA CATATTGTATCTATCGATAGTCGATATTCGATAGTTTGACAAATCAACCT ATTTATCATGGAATTTCTAAGCAAATCAACCTACTTCCAAGGAAGTACTT ATTGACAGCACTGATGTATGTATCTGCCGATAGTCGATGTTCGGCCCTCA TGGCACCGGTGGAGTGCGTCAAGTGCCTCCTGCAGATACAGGGGGGGCAG GTGAGTACGTCAGTCACGTTTGTGGCCAGGGTTGGCACTTACAGTAGAGG TTAACTAGGGCCGAATTGGTCTTCATTTTAGGTCTGATTACCCCTAATTT CCTCTAATTAAGGGCCCCACCACCGCCCTCATGGCACCGGTGGAGAGTGT CAAGTGCCTGCTGCAGATACAGGGGGAGCAGGTGTGTGTGTACTCACGTT CGGACGAGGTTTATCGTCTCTGTGCATGCCCTGGAACCGATCGATCCTCG TCTTTGCTCCCTCTCGCGATGCATCACGTTTGTGGGCGTGCGAAGGTACA AACAACGTCGGTCTGGTTCGCGTTGGGCGTGTCAGGGGAAGACCAGTGAT GGGATATCTAAGCAAATCAACCTATTTATCGACAGTTCTGATATATATAT ATATCGATAGTTGATAGTCGATATTCGGCCCTCGTGGCCCCGGTGGAGCG CGTCAAGTGCCTGCAGATACAGGGGGAGCAGGTGAGTACGTCACGTTTTG TGGCAGCGATGGAATTTCTAAGCAAATCAACCTATTTATCGACAATACTG ATCTATATATTCTACTGATAGTCAGAGTGTCCAGTGCCTCCTGCAGATAC AGGGGGAGCAGGCAAGTACGTAACGTTTGTGGGCAGGGTTGGCACCTAGG GGCCAACTGGGGCAAATTAGCCTTCATTTTAGGTCTGATTACCCCTAATT ACTTTGGAGTACCTCCAATTAAGGTCCCCACCACCGCCCTCATGGCACCG GTGGAGCGCGTCAAATGCCTCCTGCAGTTACAGGGGGAGCAGGTGAGTGC GTCACGTTTGTGGCAGCGATGAAATTTCTAGCAAATCAACCTATTTATTG ACAGTACTGATCTATTTTGAGTGGTAGATAAGCGGCGAGTTCCAGGCCCC GGGCCAAAAGGCGCATCCCGAAACGGGACTCAACGAAGCCCTTCTTCCCC TCGCAGGGCAAAAAGAAAACGAAATATATAGAAGGAACGGGGCGGGACAG GGAAAAGGAAGGGGCGGGGAAGTGCTCTGTATATCTACGGATAGCCGATG TTCGGCCCTCATGGCCCCGGTGGAGCGCATCAAGTGCCTCCTGCAGATAC AGGGGGAGCAGGTACGTCAGTCACGTTTGTGGGCATGCGAAGGTCCATCT CAAGGGCCGTTCTGTACAGTTCTCATGAGAATCCGTCCAATACTTGAGGA GCTCGTGAATGTTCAGAGCTGCAAGTTTTGTTAAACTACTGTATTTCTTT CTGTGGAGTACCGTTATCGTCGGAGAGATTTTGTCCCCGCGGGCCAATTT TCGGGGGAATACTTCTAGCCGGGAAGGTCCCGAATTGTCCCAAAAGCTCT TGAAACAGTCCCCTCAGGTCCTGAGGGAGATTTTCCGAAAATTCCCGTAC GAATCCGGCCAGTATTCGACGAGAAATGCCCTCCTGAATATTGGCATGGG GGGGCAAGATCTCTCCGACGATTACGACAGATGCCTAGCGAGCGGCCCGT CATCCGGCTTGCCAACGCCAAGGCATAATCTCATTCCAGGCTTGGCCAGT GCGCGGCCTGGCCGGTGCAAACCCGGCATGCTCCATCCCGGCCTATTTGG GATGCGAGAGTCCGTGGCTACGGTAAATAGCTACTCTTGTCGGAGGACAA ACCCGAAGCTCCGACTTAGGGCTGTCGGCATTGCACGCAGGGCTTTGTCG CAACACAAGCCAATGAGTACAGAGAGAGAGAGAGAGAGAGAGTAGCGCTA CGGGTTGCGTCCCCGCCCCTTTCCGTCTTTATTTGTTGTTTTCTTCTTGC CCTGCGACGGAAGGAAGGTTTCCGTTGAGTCCTGTTTTGGGACGAGCGTT TTGGCACTGGGCCTGGAAGTCGCCGCTTGTCTACCACTTAAATAAGGGTT GCGTCCTGGTCGCGCTGGCAGGTGGCGTGCGGGGGCAGCGCCCAGGACCA AGGCGTGGTGTACTGTGCGGGAAAGTTCTGTCGATACCCGATATTCGATA GTTTGACCCACACTAAATCCAAGTAGTCACAGTAGTAGCGCCACCCGCAC AATCAGTCGAGCCCGGCAACTATCTACTGATCGATATTCCATTACTTGTA GGGTCACCCCTGCGATGTTGATGTGATGTGATGTGATGTGATGTCAAACT AAACTAGAGTGCACATCACATCACATCGCATCATTGCTGCATCGATATCC CATCATCACTGGCAGGTGGCGCGCGGGGGCAGCGCCCAGTACAAAGGCAT GGTGGACTGCGCGGGGAAGCTCTACCGGGCGGGGGGGCTGGGAAGCGTGT TCAAGGGGTGGGAGATCACTCTCATCAGGGACGTTCCTGGGTGAGTGAGA GAGTTTTTACCAGTGATGGGATATTGATCAGTAGATAGTTATCGGGCTCG ACTGATTTTGTGGGTGGCGTTACAAACTACTTCCGGAAGTACTTGGAATT GGTGTGGGTCAAACTATCGAATATCGACTATGGATAGATATATAGACCAG TACTGTTGACAAATAGGTTGATTTGCGTAGGTATTCCTTCACTGGTTTTG ACGGCGTAGGAGGGCGTTCCTGTTGTTTGTGTGGAACTGGGGCAGGCGTT TTGAGGCTGGGGGTGTGTGTTCAAGGGGTGGGAGATCACACTAATCAGGG ACATTCGTCCAGGGGTGAGTAAGAGTGTTTTGACGGTGCACTACGTAGTA TGCATATATATATGTATCGTGGCGCGATTATTTCCTTCATTCACAGTTTT CGGGAAAGCTTGTCAAGGCAGGGCCTAGGTGTGCCATACAAGTACGCCAC CAGTGCATTGACCCTGGCTCGTTGTTTGTAGTTCTTTGATGATGTGTCAA TCACTACAGTAGTACGAGAACGCTCAATTCTTAAATGGGACAACCACTAA CACGAGAACACTCAATCTCACACACGTGCGTATTGCGCCTCGTTGCAATT TATATGAATCGCAACCCTCACTCGGCCTCCACACGCCACACGCCTCTTTG CCGCGGAAAACCGCGCCAAAAAGGTCCGTTGCTTACTTTGGCATATACTA GGGCCTCAAGGTATCCTTCGCCTCTTTGCCACGGAACCACACCAAAACTT TAGGTCCATTGCGTATTTTGGCGTTTACGAGGGCCTCAAGATATCATTTG CCGGCAAGGACGGGAAGGCCTCTGACGCCGCCATCCTGGCCGCGGGAGGA TTTGCAGGTGAGTGGTGTTGTGAACTGGTGTCGGTTTTTACCGGTCGGTA CCAGTTAACTGGTTCAACCGGCTAGCCGACCGGTGGCCAATTGTGTAGCC GGAGCCGGTGACATGACCGGTACTACTGTACGAGTACTTGATTTTGGCAA TGCGTTCGCCGCTATCCACAACCGGTTAAAACCGACCGGTGCACACGACC GGTTAACAGTTCAACTGGTACTCGTAGGCCATGCCAGTTCACAACTCTAC AGGTGAGGGTGGGAGGCAGTTGGGGGGTGTGCAGGTGGGACGGGAGGCAT TTTTTTGCCTTTTCCTTTGCCGGCAAGGACGGGAAGGCCTCGGACCAATC CTGGCCTGGCCGCAGGAGGCTTTGCAGGTGAGGGTGGGAGGCGGTTGTGG TGGTAGAACATCTGTATCCATGATGTTAGAACGACACACATGGCCTCTTG TCTCCTACATATACAAGACTCTTTACAGCCCCTTGTGGCACTGTCACTCT AGGCGATATCTCTAGCTCTCCTAATTGCACCTTAGGTATTTCTGCTATTT CTGCCATTGTCAGCACAGGCCCCCAGGCCTCACTGCCCTATCTAATGGCG CTAATGAACAGCGTGTTGCTGTGAGACGAAGTACTGCGACAGCCACATCC CTCACCCCCCCCCCTCTTTCCTCACCTTCCTCCGCCCAGGCATGGCGAAC TGGTCGGTGTCCATCCCCCCGGATGTGGTCAAGTCTAGGTGGTAGTTAGG GGTAATTAGACCTAAAATGAAGGCTAATTTGGCCCAAATGAACCTCGAAG TGCCAACCCTGTTCCTCTGATAAGGCATTGCGAACTGGAGTGCCAACCCT GTTCCTCCGATCAGGCATTGGCGAACTGGACGCCGTCCAGTTCGCCAATG CCTGATCGGAGGAACAGGGTTGGCACTTTGAGTGGCCGGTGTCCCATCCC CCCACACGTGGTCAAGTCGAGGTGGTAATTAGGGGTAATTAGAGGCAATT AGGGGTAATTAGACCTAAAATGAAGGCTAAATAGGCCAAAATTGACCTCT AAGTGCTAAATAACCTCTGATCAGGCATGGCGAACTGGACGGTGTCCATC CGCCGGGATGTGGTCAAGTCTAGGTGGCAGACCCTCAACTAGAGGTAATT AGGGGTAACTACAGTAGACCTAAAATGAAGGGCAGTTATGGGTAATTAGG CCTAGAATGAAGGCAAAATTAGGCAAAATTAACCTCTGAAAGCCAATTCT GCTCTGATCAGGCGGGGCGAACTGGACGGTGTCCATCCCCCCGGATGTGG TCAAGTCTAGTGACAGACTGCTCTTACTTAGAGGTAATTGGGGGTACTTG GACCTAAAATGAAGGCCATATTAGGCAAAATTAACCTCTAAGTGCAAATT CTGCTCTGATCAGGCATGGCGAACTGGACGGTGGCCATCCCCCCGGATGT GGTCAAGTCTAGGTGGCAGACCGCTCCAGAGGGGACGTACAGCGGGATAG CTGACCTTACAAGGTGTGTGCCATCACCAGTGAACAAACATAAAATTTCT TTCTCTTCGGTGTGAGAGAACGGAAACCCAGGAGAGGTGCACGCAGTCCA CTTGAACCCTTTTGCCCCTGGAGTCCGTACTGTCTTAGGGTTGTGCTGTG TAAGTCCAATTTGCCAGGGGTAGAAGGGTTATGAACCTCAACAGCGGCCT GTCCTTTCTCCCAAGGCCTAAGGCAAATCAGTGGGGGAAGGAATTGGGGA GGGGGAGGGGAAGGGAGGGGGAGGAAAGGGGGGGGGGGGGCTTGGAGGAG GAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGCCGGAGGAGGAGGAGGA GGAGCAGCAGCAGCAGCAAAGTGGAGAGGAAGGCGAGGAGGAGGAGGAGG AGAAGGAGGAAGAGGAGGAGGAGGAGGACGAGGAGAAGGAGGAAGAGAGG GGGTTTCTGGCATGTATCTGCCGTGGTCCGTACCTCGCCCCTTGTCCTTC CTGTTCATTCCTTGCTCGGGAAAACGGGCCCGGAACTCGCAAGCCATCGA CAAGGATCAGTACTTGCAAGTACGAGATACTGTACTCGTACTCGTGCTCG TAGGTATTTAGCATGGGATCAGCGCACCACAGCTAACAGAGGTGATCCAT ATAAATTGTGGCGAGGTACAGTCCCACGTGCATGAGATTTAATGTTCTCG TATGAGTACTAGTGGCTATCCCATTTAAGAATCGAGATCCTTTTTCCGCC CCCTATCTGCCCTGCGAGTGAAGGCGGGTGAAAAGACGGGCTTCTGGGGG TGGGGGCCCTGAACTCGCGTAAGTAGGGGCACCTCTTCTTTCCACTCGCT TGTCTATATTCATGCCAAAATTGAGACTGCTTGTTCTCGTATACTCCATG TAGTTATCAAGTCAAAGAATTAAAAACAAAACGGACCTTGACGGGGTTGA GGAGGGGGCGCGGTGCACCGGCGCTGCCTCCTCTTCGCACCGACTGCCAC CATCACCGCCACAACCACGTCCATTTCCACCGCCTCCACCACCACCGCCG CCGCCTCTACCACCACCACCTCCTCCACCACAACCACCGCCTCCACCATG GCCACCACCACCACCACAACCACATCCACAACCACCGCCTCCACCAACAC CGCCACCGCCTCCACCACCACCACCGCCTCCACCACAACCACCGCCTCCA CCATCGCCACCACAACCAGCACCATCACCACCATCACCGCCGCCACCACC ACCACCACCACCACCACCAACACCGCTGCCGCCGCCACCGCCACACCGCC ACCGCCACCACCACCACCACCACCACCACATCCACAACCACCGCCTCCAC CACCACCACCGCAACCACATCCACAACCACCGCCTCCACCACAACCACTG CCTCCACCATCGACACCACCACCAGCACCACCACCACCATCACCTCCACC ACCACCACCACCACCACCACCACCACCACCACCACAACCACCACCACCAC AGCCGCCGCCACCCCCACACTGCCGGCGCCACCACCACCACCACCACCAC ATCCGCAACCACCGCCTCACCACCACCACCACAACCACATCCACAACCAC CACCACCACCGCCACCACCACCGCCTTCCCCACCACCAGCACCACCACCA CTTCCACTACCACCTCCCCCACCCCGCCGCCGCCACACCACCGCCACACC GCCGCCACCGCCATCGCCCTCGCCGCCGCCGGCGCCGCGGCCACCGCAAC CACCACCATCACCTCGAGAACACTCAATTTAACACACGTGCGATCGTACC TAGTTACAATTTATTTGAGTCACCACCATCACCTCCCCCACCACGCCGCC GCCGCCACCACGGCGTGCAGGGCGCTGCTGCGGGAGGAAGGAGTCGGGGC GCTGTACCGCGGCATAGGGCCGGCCATGGTGCGGGCTTTCCCGGCCAACG CGGCGTGCTTCTTCGGCGTGGATGTGGCCAAGCGCGTGCTCACCAAGGCC GGCATGTCATGA
back to top

Coding sequence (CDS) from alignment at S-ischiensis_contig88:527582..539343-

>mRNA_S-ischiensis_contig88.20333.1 ID=mRNA_S-ischiensis_contig88.20333.1|Name=mRNA_S-ischiensis_contig88.20333.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1722bp|location=Sequence derived from alignment at S-ischiensis_contig88:527582..539343- (Schizocladia ischiensis KU_0333)
ATGAACTTCCTGGCGGGAGGGTTTGGAGATGAACTTCCTGGCGGGAGGGT
TTGGAGGCGTGTGTCTGGTGCTGGTGGGACACCCCCTGGACCTGATCAAG
GTCAAGCTGCAGACCGGGTCGGCGTACACGGGTATGGTGGACGCCATCGT
CAAGACCTTTCAGAGGGAAGGGGCGTGTGTCTGGTGCTGGTGGGACACCC
CCTGGACCTGATCAAGGTCAAGCTGCAGACCGGGTCGGCGTACACGGGTA
TGGTGGACGCCATCGTCAAGACCTTTCAGAGGGAAGGGCTGCGGGGTTTC
TACCGAGGCGTCTCCGCTCCACTCACGGGCATCACCCCCATATTCGCTAC
CTGCTTTTGGGGCTACGACATGGGTCAGAAGCTCGTTAGCTGCGGGGTTT
CTACCGAGGCGTCTCCGCTCCACTCACGGGCATCACCCCCATATTCGCTA
CCTGCTTTTGGGGCTACGACATGGGTCAGAAGCTCGTTAGAATGGCCAAC
GGAGATGAGCACGGTAGCCAGCCCCTGACCCTGGGCGAGAAGATGGGGGC
GGGCGCCTTCTCCGCCGTACCCACCACCGCTCTAACGGCACCAGTGGAGC
GCGTCAAGTGCCTCCTGCAGATCCAGGGGGAGCAGAATGGCCAACGGAGA
TGAGCACGGTAGCCAGCCCCTGACCCTGGGCGAGAAGATGGGGGCGGGCG
CCTTCTCCGCCGTACCCACCACCGCTCTAACGGCACCAGTGGAGCGCGTC
AAGTGCCTCCTGCAGATCCAGGGGGAGCAGGTGGCGCGCGGGGGCAGCGC
CCAGTACAAAGGCATGGTGGACTGCGCGGGGAAGCTCTACCGGGCGGGGG
GGCTGGGAAGCGTGTTCAAGGGGTGGGAGATCACTCTCATCAGGGACGTT
CCTGGGTGGCGCGCGGGGGCAGCGCCCAGTACAAAGGCATGGTGGACTGC
GCGGGGAAGCTCTACCGGGCGGGGGGGCTGGGAAGCGTGTTCAAGGGGTG
GGAGATCACTCTCATCAGGGACGTTCCTGGGTCCATTGCGTATTTTGGCG
TTTACGAGGGCCTCAAGATATCATTTGCCGGCAAGGACGGGAAGGCCTCT
GACGCCGCCATCCTGGCCGCGGGAGGATTTGCAGGTCCATTGCGTATTTT
GGCGTTTACGAGGGCCTCAAGATATCATTTGCCGGCAAGGACGGGAAGGC
CTCTGACGCCGCCATCCTGGCCGCGGGAGGATTTGCAGGCATGGCGAACT
GGACGGTGGCCATCCCCCCGGATGTGGTCAAGTCTAGGTGGCAGACCGCT
CCAGAGGGGACGTACAGCGGGATAGCTGACCTTACAAGGCATGGCGAACT
GGACGGTGGCCATCCCCCCGGATGTGGTCAAGTCTAGGTGGCAGACCGCT
CCAGAGGGGACGTACAGCGGGATAGCTGACCTTACAAGGGCGCTGCTGCG
GGAGGAAGGAGTCGGGGCGCTGTACCGCGGCATAGGGCCGGCCATGGTGC
GGGCTTTCCCGGCCAACGCGGCGTGCTTCTTCGGCGTGGATGTGGCCAAG
CGCGTGCTCACCAAGGCCGGCATGTCATGAGGCGCTGCTGCGGGAGGAAG
GAGTCGGGGCGCTGTACCGCGGCATAGGGCCGGCCATGGTGCGGGCTTTC
CCGGCCAACGCGGCGTGCTTCTTCGGCGTGGATGTGGCCAAGCGCGTGCT
CACCAAGGCCGGCATGTCATGA
back to top