mRNA_S-ischiensis_contig88.20326.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig88.20326.1
Unique NamemRNA_S-ischiensis_contig88.20326.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
BLAST of mRNA_S-ischiensis_contig88.20326.1 vs. uniprot
Match: D7G301_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G301_ECTSI)

HSP 1 Score: 274 bits (700), Expect = 3.830e-80
Identity = 155/305 (50.82%), Postives = 194/305 (63.61%), Query Frame = 1
Query:    1 QFTSVANVSYPAAYEHFLGALDVINLDLSWVLSAGCFARLDYHARLLALRRTLSPA-GLAALARTVAAAVMAKKTPPEIEERLKRVRHKHMTLLLLLTFVLYSSVSTTVFEAFSCEELEDGGNYLRVDYSISCDTELHAAYRFYAALMILVYPVGIPVLYGSLLFRHRRALNPPSPMNATGATVGGGAGEVEGLPLRREDNPRVDYFSDLWDPYRPERYWYELVECFRRILLTGFIVFIFPDTAGQVAVVCFFTVVFMLVFEVLSPYESRAEAMLARGGAVVVFCSMYLALLLKVDVSNEEDSSQ 912
            QFTSVANV+YP  Y+ FL  LDV N DLSWVLSAGC   +D+H RLLA   T+SP  GL  LA T AAAV   +   E    L+ + +KH++L+LLLTF++YSSVS T+F+AF CEELEDG NYLR DY+I CD+  H A++ YA  M++VY VGIP LY  LLFR R  L                          RE   R    SDLW PY+P  ++YE++EC RR+LL G +VFIFP+TA Q+A+       F++V E L+P+ S+ +A L R G  VVF SMY+ALLLKVDVS E   SQ
Sbjct:  928 QFTSVANVTYPDVYKRFLDGLDVFNFDLSWVLSAGCIFDIDFHDRLLA--STVSPVIGLLFLAGTYAAAVSMNRGKAE---SLQVIWNKHVSLVLLLTFLIYSSVSATLFKAFVCEELEDGTNYLRADYTIDCDSSKHKAFQVYAGFMVVVYVVGIPALYAFLLFRDRHVLKDHH--------------------ADREQTARTTSTSDLWKPYKPSVFYYEVIECGRRVLLAGVVVFIFPNTAAQIAITLMMAFAFVMVSEGLAPFASKWDAWLNRTGHTVVFVSMYIALLLKVDVSGERAGSQ 1207          
BLAST of mRNA_S-ischiensis_contig88.20326.1 vs. uniprot
Match: A0A6H5JY65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY65_9PHAE)

HSP 1 Score: 270 bits (691), Expect = 1.270e-78
Identity = 143/307 (46.58%), Postives = 201/307 (65.47%), Query Frame = 1
Query:    1 QFTSVANVSYPAAYEHFLGALDVINLDLSWVLSAGCFARLDYHARLLALRRTLSPAGLAALARTVAAAVMAKKTPPEIEERLKRVRHKHMTLLLLLTFVLYSSVSTTVFEAFSCEELEDGGNYLRVDYSISCDTELHAAYRFYAALMILVYPVGIPVLYGSLLFRHRRALNPPSPMNATGATVGGGAGEVEGLPLRREDNPRVDYFSDLWDPYRPERYWYELVECFRRILLTGFIVFIFPDTAGQVAVVCFFTVVFMLVFEVLSPYESRAEAMLARGGAVVVFCSMYLALLLKVDVSNEEDSSQVRF 921
            QF+SVANV+YP  Y+ FL  ++++N D+ W+ SAGC   +D+H RLL    T+ P  L ALA       +AK+     E  L+++RHKHM+++LL+TF++YSSVS TVF++F+CE+L+D   YLR DY I CD+  H A++ +A +MILVYPVGIP+ YG LL++HRR L                  E  G   +R+ +P+V   SDLW PY+P R++YE++EC RR+ LTG +VFI+P+TA QVAV       F++   VL+PY S+ +A ++  G V+VF SMY ALL KVDVS+E   SQ  F
Sbjct: 1447 QFSSVANVTYPDVYQRFLDGVNILNFDVLWIPSAGCLVEVDFHGRLLVA--TIGP--LVALALLAITYTVAKRRSSGSEAALQKIRHKHMSMVLLITFLVYSSVSATVFQSFACEDLDDHKKYLRADYRIECDSSEHQAFQVFAGIMILVYPVGIPLFYGYLLYKHRRVLK----------------SEDAG---KRQTSPQVQPISDLWFPYKPGRFYYEVIECVRRMSLTGVVVFIYPNTAAQVAVTLMIAFSFVVTSVVLAPYVSKWDASISLVGHVIVFTSMYTALLSKVDVSDERADSQEVF 1730          
BLAST of mRNA_S-ischiensis_contig88.20326.1 vs. uniprot
Match: D7FHH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH1_ECTSI)

HSP 1 Score: 264 bits (675), Expect = 2.360e-77
Identity = 149/308 (48.38%), Postives = 189/308 (61.36%), Query Frame = 1
Query:    1 QFTSVANVSYPAAYEHFLGALDVINLDLSWVLSAGCFARLDYHARLLALRRTLSPA-GLAALARTVAAAVMAKKTPPEIEERLKRVRHKHMTLLLLLTFVLYSSVSTTVFEAFSCEELEDGGNYLRVDYSISCDTELHAAYRFYAALMILVYPVGIPVLYGSLLFRHRRALNPPSPMNATGATVGGGAGEVEGLPLRREDNPRVDYFSDLWDPYRPERYWYELVECFRRILLTGFIVFIFPDTAGQVAVVCFFTVVFMLVFEVLSPYESRAEAMLARGGAVVVFCSMYLALLLKVDVSNEEDSSQVRF 921
            QFTS ANV+YP  Y+ FL  LDV N D+SWVLSAGC   LD+H RLL    T+ P   L  LA T  A     +        L+ V  +H++++LLL F++YS VS+ VF+ F+C++LE GG YLR DY I CD+  H  +R YA  MIL+YPVGIP  YG+LL R R  L                    E  P  RED PRV   S+LW PYRP  Y+YE++EC RRILLTG +VFI+P+TA Q+A+    TVVF ++ E L PY    +  ++R    VVF S+Y+ALLLKVDVSNE+ SSQ  F
Sbjct:  689 QFTSAANVTYPDVYQRFLNGLDVFNFDISWVLSAGCVMDLDFHDRLLL--STIGPIMALLFLAATYRAGSRINRGNAAT---LQLVWDRHVSMVLLLVFLVYSGVSSVVFQTFACDQLEGGGEYLRADYRIECDSSKHQGFRVYAGFMILLYPVGIPAFYGALLLRDRDVL--------------------EKDPDGREDPPRVASISNLWQPYRPSVYYYEVIECGRRILLTGLVVFIYPNTAAQIAITLIMTVVFAVLSEALRPYAQAWDTWVSRVSHAVVFMSVYVALLLKVDVSNEKGSSQKVF 971          
BLAST of mRNA_S-ischiensis_contig88.20326.1 vs. uniprot
Match: A0A6H5K0E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0E9_9PHAE)

HSP 1 Score: 266 bits (679), Expect = 4.800e-77
Identity = 147/308 (47.73%), Postives = 196/308 (63.64%), Query Frame = 1
Query:    1 QFTSVANVSYPAAYEHFLGALDVINLDLSWVLSAGCFARLDYHARLLALRRTLSP-AGLAALARTVAAAVMAKKTPPEIEERLKRVRHKHMTLLLLLTFVLYSSVSTTVFEAFSCEELEDGGNYLRVDYSISCDTELHAAYRFYAALMILVYPVGIPVLYGSLLFRHRRALNPPSPMNATGATVGGGAGEVEGLPLRREDNPRVDYFSDLWDPYRPERYWYELVECFRRILLTGFIVFIFPDTAGQVAVVCFFTVVFMLVFEVLSPYESRAEAMLARGGAVVVFCSMYLALLLKVDVSNEEDSSQVRF 921
            QFTSVANV+YP  Y+  L  LDV N DLSW+LSAGC   +++H RLL    T+SP   L  LA T AAA    +  PE   +L  + +KH+T++LLLTF +YSSVS+T+F AF+C++L+   +YLR DYSI C++  H   + YA  MI++Y VGIP LY  LLF+ R  L    P                     RE+ PRV   S+LW+PY+P  ++YE++ECFRR+LL G +VFI+P+TA Q+AV       F L+ E L+PY SR +  ++R G +VVF SMY+ALLLKVDVS+E  SSQ  F
Sbjct: 1184 QFTSVANVTYPDVYQDLLDVLDVFNFDLSWLLSAGCVVDMNFHGRLLV--STISPIVALLLLACTYAAAARINRGEPE---KLNIIWNKHVTVVLLLTFFVYSSVSSTLFRAFACDDLDYSKDYLRADYSIECNSSEHRGIQVYAGFMIVIYTVGIPALYAELLFKSRDVLKDEDP--------------------DREEPPRVKSISNLWEPYKPAVFYYEVIECFRRVLLAGVVVFIYPNTAAQIAVTLLIAFAFALLSEGLAPYASRWDTWISRVGHIVVFLSMYVALLLKVDVSDERASSQEVF 1466          
BLAST of mRNA_S-ischiensis_contig88.20326.1 vs. uniprot
Match: D7FHG7_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHG7_ECTSI)

HSP 1 Score: 265 bits (678), Expect = 7.430e-77
Identity = 148/307 (48.21%), Postives = 189/307 (61.56%), Query Frame = 1
Query:    4 FTSVANVSYPAAYEHFLGALDVINLDLSWVLSAGCFARLDYHARLLALRRTLSPA-GLAALARTVAAAVMAKKTPPEIEERLKRVRHKHMTLLLLLTFVLYSSVSTTVFEAFSCEELEDGGNYLRVDYSISCDTELHAAYRFYAALMILVYPVGIPVLYGSLLFRHRRALNPPSPMNATGATVGGGAGEVEGLPLRREDNPRVDYFSDLWDPYRPERYWYELVECFRRILLTGFIVFIFPDTAGQVAVVCFFTVVFMLVFEVLSPYESRAEAMLARGGAVVVFCSMYLALLLKVDVSNEEDSSQVRF 921
            FTS ANV+YP  Y+  L  LDV N D+SW++SAGC   LD+H RLL    T+ P   L  LA T  A     +        L+ V  +H++++LLL FV+YSSVS+ VF+ F+C++LE GG YLR DY I CD+  H  +R YA  MIL+YPVGIP  YG+LLFR R  L                    E  P  RED PRV   S+LW PYRP  Y+YE++EC RRILLTG +VFI+P+TA Q+A+    TVVF ++ E L PY    +  ++R    VVF S+Y+ALLLKVDVSNE+ SSQ  F
Sbjct: 2428 FTSAANVTYPDVYQRLLNGLDVFNFDISWIISAGCVMNLDFHDRLLL--STIGPIMALLCLAATYRAGSRINRGNAAT---LQLVWDRHVSMVLLLVFVVYSSVSSVVFQTFACDQLEGGGEYLRADYRIECDSSKHQGFRVYAGFMILLYPVGIPAFYGALLFRDRDVL--------------------EKDPDGREDPPRVASISNLWQPYRPSVYYYEVIECGRRILLTGLVVFIYPNTAAQIAITLIMTVVFAVLSEALRPYAQAWDTWVSRVSHAVVFMSVYVALLLKVDVSNEKGSSQKVF 2709          
BLAST of mRNA_S-ischiensis_contig88.20326.1 vs. uniprot
Match: D7G2Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z8_ECTSI)

HSP 1 Score: 262 bits (669), Expect = 1.660e-76
Identity = 147/305 (48.20%), Postives = 192/305 (62.95%), Query Frame = 1
Query:    1 QFTSVANVSYPAAYEHFLGALDVINLDLSWVLSAGCFARLDYHARLLALRRTLSP-AGLAALARTVAAAVMAKKTPPEIEERLKRVRHKHMTLLLLLTFVLYSSVSTTVFEAFSCEELEDGGNYLRVDYSISCDTELHAAYRFYAALMILVYPVGIPVLYGSLLFRHRRALNPPSPMNATGATVGGGAGEVEGLPLRREDNPRVDYFSDLWDPYRPERYWYELVECFRRILLTGFIVFIFPDTAGQVAVVCFFTVVFMLVFEVLSPYESRAEAMLARGGAVVVFCSMYLALLLKVDVSNEEDSSQ 912
            QFTSVAN+ +P  Y+ FL AL++ N DL WVLSAGC   +D+H RLL    T++P  GL  LA   AAA    +      E L+RV HKH++L+LLLTF++Y+SVS  +F+ F+CEEL+D  NYLR DY I CD+  H+A++ YA  MI++Y VGIP LYG  LFR    L                  E +     RE   R+   +DLW PYRP  ++YE++EC RR+LL G +VFI+P+TA Q+AV     VVF ++ E L+PY SR +  L R G  VV  SMY+ALLLKVDVS+E  SSQ
Sbjct:  649 QFTSVANIRFPHVYQRFLDALELFNFDLGWVLSAGCVFDVDFHDRLLV--STIAPIVGLLFLAAVYAAAA---RNSHRSSEDLQRVWHKHVSLVLLLTFLVYASVSAVLFQTFACEELDDRKNYLRADYRIECDSPKHSAFQVYAGFMIVLYTVGIPALYGGFLFRDSDVLR---------------RDEAD-----REQLARIAPTADLWKPYRPSVFYYEVIECARRVLLAGVVVFIYPNTAAQIAVALLIAVVFAMISEALAPYASRWDTWLCRMGHAVVAVSMYVALLLKVDVSDERASSQ 928          
BLAST of mRNA_S-ischiensis_contig88.20326.1 vs. uniprot
Match: D7G3S0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3S0_ECTSI)

HSP 1 Score: 260 bits (664), Expect = 5.260e-75
Identity = 143/308 (46.43%), Postives = 192/308 (62.34%), Query Frame = 1
Query:    1 QFTSVANVSYPAAYEHFLGALDVINLDLSWVLSAGC-FARLDYHARLLALRRTLSPAGLAALARTVAAAVMAKKTPPEIEERLKRVRHKHMTLLLLLTFVLYSSVSTTVFEAFSCEELEDGGNYLRVDYSISCDTELHAAYRFYAALMILVYPVGIPVLYGSLLFRHRRALNPPSPMNATGATVGGGAGEVEGLPLRREDNPRVDYFSDLWDPYRPERYWYELVECFRRILLTGFIVFIFPDTAGQVAVVCFFTVVFMLVFEVLSPYESRAEAMLARGGAVVVFCSMYLALLLKVDVSNEEDSSQVRF 921
            QF   ANV++P  Y+ FL A+DVIN D+  VL+AGC ++ +D+H RLL    T+ P  +A         V+ + +       L+++ HKH T LL LTFV+YSSVS+TVF+ F+CE L+D   YLR DY I C    H A++ YAA+MI+VYPVGIP+LY  LLF+ R  L               GA +   L +           S LW+PYRPER++YE+VEC RR++LTG +VFIFP+ A Q+A+    T  F L+FE+LSPYES ++  L+RGG V+VF SM+  LLLKVDVS E + SQ  F
Sbjct: 1313 QFADAANVTFPGLYQDFLSAIDVINFDIGSVLAAGCLWSDMDFHDRLLV--NTIGPLVVAGFLAMTYGIVIRRHSASADTGGLEKIYHKHQTALLFLTFVVYSSVSSTVFQTFACETLDDDVEYLRADYRIHCTDAKHKAFKVYAAIMIVVYPVGIPLLYALLLFQRRHVL------------ADAGADKTVALSI-----------SGLWEPYRPERFYYEVVECGRRVMLTGVVVFIFPNDAAQIAITMLITSFFSLLFEILSPYESESDMWLSRGGHVIVFLSMFDLLLLKVDVSGESNHSQAIF 1595          
BLAST of mRNA_S-ischiensis_contig88.20326.1 vs. uniprot
Match: D7G1E0_ECTSI (EsV-1-12 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1E0_ECTSI)

HSP 1 Score: 259 bits (663), Expect = 5.750e-75
Identity = 142/308 (46.10%), Postives = 193/308 (62.66%), Query Frame = 1
Query:    1 QFTSVANVSYPAAYEHFLGALDVINLDLSWVLSAGC-FARLDYHARLLALRRTLSPAGLAALARTVAAAVMAKKTPPEIEERLKRVRHKHMTLLLLLTFVLYSSVSTTVFEAFSCEELEDGGNYLRVDYSISCDTELHAAYRFYAALMILVYPVGIPVLYGSLLFRHRRALNPPSPMNATGATVGGGAGEVEGLPLRREDNPRVDYFSDLWDPYRPERYWYELVECFRRILLTGFIVFIFPDTAGQVAVVCFFTVVFMLVFEVLSPYESRAEAMLARGGAVVVFCSMYLALLLKVDVSNEEDSSQVRF 921
            QF   ANV+YP  Y+ FL A+DVIN D+  VL+AGC ++ +D+H RLL    T+ P  +          V+ + +       ++++ HKH T LLLLTF++YSSVS+TVF+ F+CE L+D   YLR DY I C    H A++ YAA+MI+VYPVGIP+LY +LLF+ R  L               GA +   L +           S LW+PYRPER++YE+VEC RR++LTG +VFIFP+ A Q+A+    T+ F  +FE+LSPYES ++  L+RGG V+VF SM+  LLLKVDVS E D SQ  F
Sbjct:  988 QFADAANVTYPGVYQDFLSAIDVINFDIGSVLAAGCLWSDMDFHDRLLVT--TIGPLVVVGFLAMTYGIVLRRHSASGDTGGVEKIYHKHQTALLLLTFLVYSSVSSTVFQTFACEILDDDVEYLRADYRIHCTDAKHQAFKVYAAIMIVVYPVGIPLLYAALLFQRRHVL------------ADAGADKTVALSI-----------SGLWEPYRPERFYYEVVECGRRVMLTGVVVFIFPNDAAQIAITMLLTLFFSSLFEILSPYESESDMWLSRGGHVIVFLSMFDLLLLKVDVSCESDQSQAVF 1270          
BLAST of mRNA_S-ischiensis_contig88.20326.1 vs. uniprot
Match: A0A6H5L324_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L324_9PHAE)

HSP 1 Score: 257 bits (657), Expect = 4.670e-74
Identity = 137/307 (44.63%), Postives = 190/307 (61.89%), Query Frame = 1
Query:    1 QFTSVANVSYPAAYEHFLGALDVINLDLSWVLSAGCFARLDYHARLLALRRTLSPAGLAALARTVAAAVMAKKTPPEIEERLKRVRHKHMTLLLLLTFVLYSSVSTTVFEAFSCEELEDGGNYLRVDYSISCDTELHAAYRFYAALMILVYPVGIPVLYGSLLFRHRRALNPPSPMNATGATVGGGAGEVEGLPLRREDNPRVDYFSDLWDPYRPERYWYELVECFRRILLTGFIVFIFPDTAGQVAVVCFFTVVFMLVFEVLSPYESRAEAMLARGGAVVVFCSMYLALLLKVDVSNEEDSSQVRF 921
            Q++ VA + YP AY+ FL  +DV+NLDL ++LS  C    +++ RLL    T+ P  +  L       V+A++     EE ++ V+ +H+++ L + FV+Y++VS T+FE F C+ L+DG +YLR DYS++CDT LH AYR YA L +LVYPVGIP ++G  LF++R  L                          RE    +   +DLW+PY+P  Y+YE+VECFRRI LTGF VFI+PD++ QVA+V     VFM+V E+LSP+    E  L R G  VVF SMYLALLL+VDVS+E D SQ  F
Sbjct:  713 QYSDVAGIEYPGAYQDFLSVVDVVNLDLGFILSFACVYDTNFYDRLL--MATIGP--VLVLGLLGCTYVVARRRNRHCEEAMRDVQRRHLSVTLFVMFVIYAAVSYTIFETFVCDTLDDGNSYLRADYSLTCDTPLHTAYRVYAGLAVLVYPVGIPCIFGWWLFKNRHELKQED----------------------REGQAELRPAADLWEPYKPSAYYYEVVECFRRIALTGFAVFIYPDSSAQVAIVLLLAAVFMVVSEILSPFARPVEMWLYRAGHYVVFASMYLALLLRVDVSDERDQSQEVF 993          
BLAST of mRNA_S-ischiensis_contig88.20326.1 vs. uniprot
Match: A0A6H5J7J9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7J9_9PHAE)

HSP 1 Score: 255 bits (652), Expect = 6.100e-74
Identity = 144/306 (47.06%), Postives = 190/306 (62.09%), Query Frame = 1
Query:    1 QFTSVANVSYPAAYEHFLGALDVINLDLSWVLSAGC-FARLDYHARLLALRRTLSP-AGLAALARTVAAAVMAKKTPPEIEERLKRVRHKHMTLLLLLTFVLYSSVSTTVFEAFSCEELEDGGNYLRVDYSISCDTELHAAYRFYAALMILVYPVGIPVLYGSLLFRHRRALNPPSPMNATGATVGGGAGEVEGLPLRREDNPRVDYFSDLWDPYRPERYWYELVECFRRILLTGFIVFIFPDTAGQVAVVCFFTVVFMLVFEVLSPYESRAEAMLARGGAVVVFCSMYLALLLKVDVSNEEDSSQ 912
            QF  VAN++YP AY+ FL A+DV+N DL   L+AGC +  +D+H RLL    TL P   +  L  T   AV    T    +      RHKH++ LLLLTF++YSSVS+TVF+ F+CE L+DG  YLRVDY+I C    H A+  YA +M++VYPVGIP+LY  LLF+ R  L                 G+       R D       + LW+PYRPER++YE++EC RRI+LTG + FIFP+ A Q+A+       F LVFEV+SPY S ++  L+RGG V+VF SM+ ALLLKVDVS+E + SQ
Sbjct:  728 QFADVANITYPQAYQDFLSAIDVVNFDLGSALAAGCLWPDIDFHDRLLL--GTLGPLVAVGFLVMTYRVAVRRNGTAGG-QTPADNTRHKHLSALLLLTFLIYSSVSSTVFQTFACETLDDGIEYLRVDYTIHCTDAKHKAFEVYAGIMVVVYPVGIPLLYAILLFQRRDVL-----------------GDA------RADKTVAQPIAGLWEPYRPERFYYEVIECGRRIMLTGVVAFIFPNDAAQIAITMLVAFFFSLVFEVMSPYTSESDTWLSRGGHVIVFLSMFDALLLKVDVSSESEQSQ 1007          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig88.20326.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G301_ECTSI3.830e-8050.82Polymorphic Outer membrane protein G/I family n=1 ... [more]
A0A6H5JY65_9PHAE1.270e-7846.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FHH1_ECTSI2.360e-7748.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K0E9_9PHAE4.800e-7747.73Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FHG7_ECTSI7.430e-7748.21LNR domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G2Z8_ECTSI1.660e-7648.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G3S0_ECTSI5.260e-7546.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G1E0_ECTSI5.750e-7546.10EsV-1-12 n=1 Tax=Ectocarpus siliculosus TaxID=2880... [more]
A0A6H5L324_9PHAE4.670e-7444.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J7J9_9PHAE6.100e-7447.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig88contigS-ischiensis_contig88:438272..443560 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score274.6
Seed ortholog evalue5.5e-71
Seed eggNOG ortholog2880.D7G301
EggNOG OGs2BFIX@1,2S176@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons6
Model size921
Cds size921
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig88.20326.1prot_S-ischiensis_contig88.20326.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig88 438272..443560 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817358.4687521-CDS-S-ischiensis_contig88:438271..4384571622817358.4687521-CDS-S-ischiensis_contig88:438271..438457Schizocladia ischiensis KU_0333CDSS-ischiensis_contig88 438272..438457 -
1695741054.2783701-CDS-S-ischiensis_contig88:438271..4384571695741054.2783701-CDS-S-ischiensis_contig88:438271..438457Schizocladia ischiensis KU_0333CDSS-ischiensis_contig88 438272..438457 -
1622817358.479828-CDS-S-ischiensis_contig88:440094..4401791622817358.479828-CDS-S-ischiensis_contig88:440094..440179Schizocladia ischiensis KU_0333CDSS-ischiensis_contig88 440095..440179 -
1695741054.2930262-CDS-S-ischiensis_contig88:440094..4401791695741054.2930262-CDS-S-ischiensis_contig88:440094..440179Schizocladia ischiensis KU_0333CDSS-ischiensis_contig88 440095..440179 -
1622817358.4906168-CDS-S-ischiensis_contig88:440848..4411121622817358.4906168-CDS-S-ischiensis_contig88:440848..441112Schizocladia ischiensis KU_0333CDSS-ischiensis_contig88 440849..441112 -
1695741054.3079417-CDS-S-ischiensis_contig88:440848..4411121695741054.3079417-CDS-S-ischiensis_contig88:440848..441112Schizocladia ischiensis KU_0333CDSS-ischiensis_contig88 440849..441112 -
1622817358.5014315-CDS-S-ischiensis_contig88:441527..4416611622817358.5014315-CDS-S-ischiensis_contig88:441527..441661Schizocladia ischiensis KU_0333CDSS-ischiensis_contig88 441528..441661 -
1695741054.3229053-CDS-S-ischiensis_contig88:441527..4416611695741054.3229053-CDS-S-ischiensis_contig88:441527..441661Schizocladia ischiensis KU_0333CDSS-ischiensis_contig88 441528..441661 -
1622817358.512079-CDS-S-ischiensis_contig88:442528..4426391622817358.512079-CDS-S-ischiensis_contig88:442528..442639Schizocladia ischiensis KU_0333CDSS-ischiensis_contig88 442529..442639 -
1695741054.3343613-CDS-S-ischiensis_contig88:442528..4426391695741054.3343613-CDS-S-ischiensis_contig88:442528..442639Schizocladia ischiensis KU_0333CDSS-ischiensis_contig88 442529..442639 -
1622817358.5227296-CDS-S-ischiensis_contig88:443419..4435601622817358.5227296-CDS-S-ischiensis_contig88:443419..443560Schizocladia ischiensis KU_0333CDSS-ischiensis_contig88 443420..443560 -
1695741054.3462863-CDS-S-ischiensis_contig88:443419..4435601695741054.3462863-CDS-S-ischiensis_contig88:443419..443560Schizocladia ischiensis KU_0333CDSS-ischiensis_contig88 443420..443560 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig88.20326.1

>prot_S-ischiensis_contig88.20326.1 ID=prot_S-ischiensis_contig88.20326.1|Name=mRNA_S-ischiensis_contig88.20326.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=307bp
QFTSVANVSYPAAYEHFLGALDVINLDLSWVLSAGCFARLDYHARLLALR
RTLSPAGLAALARTVAAAVMAKKTPPEIEERLKRVRHKHMTLLLLLTFVL
YSSVSTTVFEAFSCEELEDGGNYLRVDYSISCDTELHAAYRFYAALMILV
YPVGIPVLYGSLLFRHRRALNPPSPMNATGATVGGGAGEVEGLPLRREDN
PRVDYFSDLWDPYRPERYWYELVECFRRILLTGFIVFIFPDTAGQVAVVC
FFTVVFMLVFEVLSPYESRAEAMLARGGAVVVFCSMYLALLLKVDVSNEE
DSSQVRF
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mRNA from alignment at S-ischiensis_contig88:438272..443560-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig88.20326.1 ID=mRNA_S-ischiensis_contig88.20326.1|Name=mRNA_S-ischiensis_contig88.20326.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=5289bp|location=Sequence derived from alignment at S-ischiensis_contig88:438272..443560- (Schizocladia ischiensis KU_0333)
CAGTTCACCTCGGTGGCCAACGTCTCCTACCCGGCCGCCTATGAGCACTT CCTCGGCGCGCTCGACGTCATCAACCTCGACCTCTCCTGGGTCCTCTCGG CCGGCTGCTTCGCCCGCCTCGACTACCACGCGCGCCTCCTCGTCGCCACA GCCTCCCCCCTCGCCTTCGCCGCCGCCCTCGCCGCCTCCTACGCCTTCGC CAAGCGCCGGAACTCCCACCCCATCCCCACCGACAAGGGCTACTATGACC GCAAGCCCCCCGCCGGAGGCACCAATGCCTTCCCAGACTCCGCACACACC CTCCCCGCCGGGACCGCCGGGGCTGCCGCATTCCAAGGTACGAACCAGAG CGCCCCGTGGGAGCAGGAGGCGGGGGCGGCATCGGCGGCGGCGGCAGGGG CGGGGGTTTCGCCCGGAACGGGCCGTGTTGGCGGCGGCGGCGGCGGTGTG GGTGAGGTCGGGACGGTGGGTGGCGGCGGCGGCGGCGGCGGCGGCGGCCC GGCGGCGGCGGGATTGGGCGCCTCGCGAACCCTCAAGCCGCTGTTTGAGA CGTACGCCGCCGGCGTGAGCGCGCTGGAGGCGGACGACGACAGCACGCTG GGGGGGAGCAACCGTCACGCCCTCACCCTCAGCGGCGGCACGAGCCAGCG GGGGGAGGACGACGATGACGGCGGCGGCAGCGGCGGCAGCGGCGGAGCGG GGCGCTACGAGGTCGGCTCCCTCCCCTCTCCCCTCCGCTCTACGTTCCGC GACAGTGACGACGCCGGCGGCGGCGGCGGGGGGGGACGGGGCGGGGCGGG GCACGAGGAGGAGGAGGAGAAGTCTCCTGGCGGGTCGACGGCGGTGAAGG CAGGGACGGCGGCGGCGGCGGCGGCGGCGGGGGCGACGTCTCCGTTGTCG TCTACGCTTTCGCCTGGGCAGGCGTTGAGGAGGACGTTGTCTCCGGCAGG GCTGGCGGCTCTGGCACGGACGGTGGCGGCGGCTGTGATGGCTAAGAAGA CGCCCCCTGAGATTGAAGAGCGGCTGAAACGGGTGCGTGTATGGGTGATG CATATACTTCGAAGTATACTGTAATGAGATACAATCGCACGTGTGTGAGA TTGAGTGTTCTCATAGTAGTGGTTGTCCCATTGAAGGATTGTGTGAAGGC GCTTCTGATCCTCGCAGGACGACCCGATCGATTCGTTAGTACTTTGAAGT ATGTGCGTGTAAGAGTACTCACGCTATTTGAAGCGGACTAAACTACAGTA CTGACAATAGGTGTACCGGTAGCGCTGTACCCGTTGTGTACTGTACGGTA CAGTACTGGTACATCGCGGCAACGGTACCACAGTACTGCACTGCGCTTCT TGGGATGTACTCCAAGTGCCACAGTATACGATCTGTTGACACCTTTGCAT GTGCATGGGCTGATAGCGCCTGCCATGGCAAGCCGGGCGAGACTCAAGAG CTCCAATCATTACAGCACACACACTTGTACAGCAGTACAGTGACTGCCAA CTCACCGCAATGCCCCCCTTTCTGGCTTGCGGCGGCAGTCACTGTGCCAT TGTACGAGTGTGTGTGCTGTACTCGTAATGTTTGGAGTGTCGCCCGCTTA TACTGTTGTACGAGTGTAAGCTTATTGTATGAGTTGGAGTTACCGTACCT TATGCAACGGCACGGTAACTGCCAACTCACTGCCATGCACCCCCCCCCCC CCCCCCTGGAACCACCACCACCACCACCACCACCACCACCGCCACCACGA CCACCACCACCACCACCTCCACCTCCACCACCACCACCACCACCTCCACG TCCACCACCACCACCTCCACCACCACCACCACCACCACCACCACCACCAC CACCACCAACACCAACACCACCACCAACACCACCACCACCACCCCGCAGG TGAGACACAAGCACATGACGTTGCTGCTCCTCCTGACGTTCGTGCTCTAC TCCTCGGTGTCGACCACGGTCTTTGAGGCATTTTCCTGCGAGGAGCTGGA GGACGGCGGCAACTACCTCCGTGTGGACTACAGGTGCTAACTACTTGGAT ATCTTCGAAGTGTTTTGAAACGAAGTCTCTTAACTACTTGGACATTGTGA AACGAAGTCTCTTAGCTACTTGAGTTCTTGTGCTCTACTCCTCGGTGTCC ACCACTGTGTTCGAGGCCTTCTCGTGTGAGGAGCTCAAAGATGGCGGCAA CTACCTCCGCCTGGACTGCAGGTAGGTGCTCGCAGGCAGTGATGGAATGT CTAAGCAAATCAACCTATTTATCGACAGTACTGATCTATACATCTACGGA TAGTCTAATTTCGATAGTTTGACCCACACAAAATCCAAGCACAGTAGTCA GTAACCCCACCAACAAAACCAGTCGAGCCCGATAACATATCTGCTGATCG ATATCCCACCACTGACCCTCTCCCCCCATCCCCCCCCCCGCCCCGCAGCA TATCTTGCGACACGGAGCTCCACGCAGCCTACCGCTTCTACGCGGCGCTC ATGATACTGGTGTATCCCGTGGGCATCCCTGTCCTGTACGGCTCTCTGCT CTTCCGCCACCGCCGGGCCCTGAACCCGCCCTCGCCCATGAATGCCACGG GGGCGACGGTGGGGGGCGGGGCGGGGGAGGTGGAAGGGCTGCCCCTCCGG AGGGAGGACAACCCACGGGTGGATTATTTCTCCGACCTGTGGGACCCCTA CAGGCCCGAGAGGTTTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTTG TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGATGTGA TGTGATGTGATGTGGTGCGAAGCGATATGTCGAGCTAGTTGAAGCACCGC ACAGAAAAGCAAGCACATGCCACATCGTGAAAACAACGACATCGACAGCA GCAGCAGCAGCTGCAGCAGCTGCGGCGGCGGCATCAACAACAACAGGAAC AACAACAGCAACAGCAGCAGCAGCACCAACAACCGCAACAACCACAACCA TCACAATAACAACAACGGCAACAACAATAACAACGACAACAACAACAACA ACAATATGCCCTGCGAGTGAAGGCGAGTGAAAGGAAGGGCTTCCGGGGGC GGGGCCCTGAACTCGCGTATGTAGGAACAGCTCATCTTTCCCACTCGCTT GTTTGTCTTCTTGCAAAAAACAACCACAACAGCAGCAACAACAACAACAA CTACGAGTAGAACAAGAACAACAGCAACATCAACAACGACAACAACACCA CCACCACCAGTACCATCACCTGCCATCACCACACCACCACCACCAACAAC AGCAACAACAACAACAACAGCCACAACAACAAAAACCGAGCAAAACAACA TGGTCGTGCCTGCCTCTTTTGCGTGTGGCAGGTACTGGTACGAGCTGGTA GAGTGCTTCCGGCGCATCCTTCTCACGGGCTTCATCGTCTTCATATTCCC CGACACCGCGGGACAGGTAGGCCCACAAAACCCTGTTTCATCACTCTCTA ACGTCGAGATCTAGACAGCGCCTTCCGGCGCACCCTTCTCACGGGCTTCA TTGTATCATATTCCCCGACACCGCGGGCCAGGTGGGCTCACGCGGCGTAA CCGAAATGTACCCAACGCGTAACCGACGAAACGTACCCGAAACGTAGCCG AAACGTAGCCGTAACATTGCCGAAACGTAGATCGTCTTCTATAGCAACTG AGAAACATCTTTCTTGATGTTCCCCGACACCGCGGGACAGGTGGGCCCAC GCGCCGTAACCGACTGACGCAAACCGAAAAGTAACCGAAACACAGTGATG GAATACGTATCGATCAGCAGATAGCTTTCGGGGTCGACTGATTTTGTGGG TGGCGTTGCTGACTACTTGGATTCAGTGTGGGTCGAACTATCGAATATCG ACTGGAGCTATTGATAGATATATTTTGTGTTTTCTTTTTGCCTTGCGAGG GGAAGAAGGGCTTCGTTGATTCCTGTTTGTCGGGCTAGCCTTTTGGCACG GGGCCTGGAACTCGCCGCTACCACTCAAAATAGATCGGTACTGTCGACAA ATAGGCTGATTTGCTTAGATATTCCATCACCGCAGAAACGTAACCGAAAC GTAGCCGAAACACGTCGGCAGTAATTTTGCCGTAGCTGAAAACCGACCTA CGCGTAACCGAAACTCAACGGAAACGCGCGCGACGAACATTTCAAAACAG CCGAAGCATACCGTCTTCAACGTGATATGGCTACGCTACCGTTCCAATCC CCTCGGAAAGGGGCCGCTCGGCGTTAGCGGTCGGGGAAACCTTCCGATGC GACCTCGGCGGGACGGCGTCCGGCCGGAGGCCATATTAACCAATAGCGCG AGATACACCCGGGCACCTGGGACCAGACCGGGGAAAGATCCGATCTTTTG CGAATACTTCTGCCCGCCGGGGGGACCGGCCCGATGTGTGGCCCAATGGC AAGGCACCCGTGAACCAGCAACGCCTGCTCGGTGGGGACACCCCGGCCCG TTCCCGGCTCAGGTTTGAACCGTAGCGGACGGCAAGCAACTCACGAGTAC CCCTCCCCTGCCAGGTTGCGGTGGTGTGCTTTTTCACGGTGGTGTTCATG CTGGCGTTTGAGGTGCTGAGCCCGCACGAGTCCCGCAACTGACAATCTTT GTAACCAGTTGGGTTCTTTGACACTTGCTGTCCTTCAAAACTAGGGTTCT TTGAAACTGCTTCTCCTTAGCTATTTGGGTTCTTCGAAACTTGTTCTCCT TAACTACATGGGTTCTTTGAAACTTGTTCTCCTCAACTACTGTACTTGGG TTCTTCGGAACTTGTTTTCCTTTCTGCTGGGGTTCTTTGAAACTTGTTCT CCTTAGCTACATGGCTTCTTTGAAAATTGTTCTCCTTCGCTACTTGGGTT CTTTGAAACTTGTTCTCGTTAACTACTTGGGTTCTTTGAAACTTGTTCTC CTTAACTGCAGTACTTGGGTTCTTTGAAACTGGTTCTCCCTAACTACTTG GGGGTTCTTCGAAACTTGTTCTCTTATCTACTTGGGCTCTTTGAAACTTG TTCTCCTTAGCTACTTGGGTTCTTCGGAACTTTTTCTCCTTAACTACTCG CAGGTGGCGGTGGTGTGCTTCTTCACGGTGGTGTTCATGCTGGTTTTCGA GGTGCTGAGCCCGTACGAGTCCCGCGCCGAGGCGATGCTGGCCCGCGGCG GCGCCGTGGTGGTCTTCTGCAGCATGTACCTCGCCCTCCTGCTGAAAGTG GACGTCTCCAACGAAGAGGACTCTTCTCAGGTCAGATTC
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Coding sequence (CDS) from alignment at S-ischiensis_contig88:438272..443560-

>mRNA_S-ischiensis_contig88.20326.1 ID=mRNA_S-ischiensis_contig88.20326.1|Name=mRNA_S-ischiensis_contig88.20326.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1842bp|location=Sequence derived from alignment at S-ischiensis_contig88:438272..443560- (Schizocladia ischiensis KU_0333)
CAGTTCACCTCGGTGGCCAACGTCTCCTACCCGGCCGCCTATGAGCACTT
CCTCGGCGCGCTCGACGTCATCAACCTCGACCTCTCCTGGGTCCTCTCGG
CCGGCTGCTTCGCCCGCCTCGACTACCACGCGCGCCTCCTCCAGTTCACC
TCGGTGGCCAACGTCTCCTACCCGGCCGCCTATGAGCACTTCCTCGGCGC
GCTCGACGTCATCAACCTCGACCTCTCCTGGGTCCTCTCGGCCGGCTGCT
TCGCCCGCCTCGACTACCACGCGCGCCTCCTCGCGTTGAGGAGGACGTTG
TCTCCGGCAGGGCTGGCGGCTCTGGCACGGACGGTGGCGGCGGCTGTGAT
GGCTAAGAAGACGCCCCCTGAGATTGAAGAGCGGCTGAAACGGGCGTTGA
GGAGGACGTTGTCTCCGGCAGGGCTGGCGGCTCTGGCACGGACGGTGGCG
GCGGCTGTGATGGCTAAGAAGACGCCCCCTGAGATTGAAGAGCGGCTGAA
ACGGGTGAGACACAAGCACATGACGTTGCTGCTCCTCCTGACGTTCGTGC
TCTACTCCTCGGTGTCGACCACGGTCTTTGAGGCATTTTCCTGCGAGGAG
CTGGAGGACGGCGGCAACTACCTCCGTGTGGACTACAGGTGAGACACAAG
CACATGACGTTGCTGCTCCTCCTGACGTTCGTGCTCTACTCCTCGGTGTC
GACCACGGTCTTTGAGGCATTTTCCTGCGAGGAGCTGGAGGACGGCGGCA
ACTACCTCCGTGTGGACTACAGCATATCTTGCGACACGGAGCTCCACGCA
GCCTACCGCTTCTACGCGGCGCTCATGATACTGGTGTATCCCGTGGGCAT
CCCTGTCCTGTACGGCTCTCTGCTCTTCCGCCACCGCCGGGCCCTGAACC
CGCCCTCGCCCATGAATGCCACGGGGGCGACGGTGGGGGGCGGGGCGGGG
GAGGTGGAAGGGCTGCCCCTCCGGAGGGAGGACAACCCACGGGTGGATTA
TTTCTCCGACCTGTGGGACCCCTACAGGCCCGAGAGCATATCTTGCGACA
CGGAGCTCCACGCAGCCTACCGCTTCTACGCGGCGCTCATGATACTGGTG
TATCCCGTGGGCATCCCTGTCCTGTACGGCTCTCTGCTCTTCCGCCACCG
CCGGGCCCTGAACCCGCCCTCGCCCATGAATGCCACGGGGGCGACGGTGG
GGGGCGGGGCGGGGGAGGTGGAAGGGCTGCCCCTCCGGAGGGAGGACAAC
CCACGGGTGGATTATTTCTCCGACCTGTGGGACCCCTACAGGCCCGAGAG
GTACTGGTACGAGCTGGTAGAGTGCTTCCGGCGCATCCTTCTCACGGGCT
TCATCGTCTTCATATTCCCCGACACCGCGGGACAGGTACTGGTACGAGCT
GGTAGAGTGCTTCCGGCGCATCCTTCTCACGGGCTTCATCGTCTTCATAT
TCCCCGACACCGCGGGACAGGTGGCGGTGGTGTGCTTCTTCACGGTGGTG
TTCATGCTGGTTTTCGAGGTGCTGAGCCCGTACGAGTCCCGCGCCGAGGC
GATGCTGGCCCGCGGCGGCGCCGTGGTGGTCTTCTGCAGCATGTACCTCG
CCCTCCTGCTGAAAGTGGACGTCTCCAACGAAGAGGACTCTTCTCAGGTC
AGATTCGTGGCGGTGGTGTGCTTCTTCACGGTGGTGTTCATGCTGGTTTT
CGAGGTGCTGAGCCCGTACGAGTCCCGCGCCGAGGCGATGCTGGCCCGCG
GCGGCGCCGTGGTGGTCTTCTGCAGCATGTACCTCGCCCTCCTGCTGAAA
GTGGACGTCTCCAACGAAGAGGACTCTTCTCAGGTCAGATTC
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