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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | hypothetical protein |
| Ec32 ortholog | Ec-06_001750.1 |
| Exons | 2 |
| Model size | 372 |
| Cds size | 369 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817349.2894564-CDS-S-ischiensis_contig87:261921..262003 | 1622817349.2894564-CDS-S-ischiensis_contig87:261921..262003 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig87 261922..262003 - |
| 1695741047.0980337-CDS-S-ischiensis_contig87:261921..262003 | 1695741047.0980337-CDS-S-ischiensis_contig87:261921..262003 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig87 261922..262003 - |
| 1622817349.300155-CDS-S-ischiensis_contig87:263755..264042 | 1622817349.300155-CDS-S-ischiensis_contig87:263755..264042 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig87 263756..264042 - |
| 1695741047.1078534-CDS-S-ischiensis_contig87:263755..264042 | 1695741047.1078534-CDS-S-ischiensis_contig87:263755..264042 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig87 263756..264042 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig87.20251.1 >prot_S-ischiensis_contig87.20251.1 ID=prot_S-ischiensis_contig87.20251.1|Name=mRNA_S-ischiensis_contig87.20251.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=123bp
EASASALFRCPVALVQMQLDPNRARRGLSLSQYKAKHQQTQPLVGPVGPD
GQGDGCPDLEKLLRQCSLSRASVDAMAQWIITHESRVRIGLETILRYMRA
WSAVLRGEGATAAAGMAKAGKSD back to topmRNA from alignment at S-ischiensis_contig87:261920..264042- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig87.20251.1 ID=mRNA_S-ischiensis_contig87.20251.1|Name=mRNA_S-ischiensis_contig87.20251.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=2123bp|location=Sequence derived from alignment at S-ischiensis_contig87:261920..264042- (Schizocladia ischiensis KU_0333)
GAGGCATCTGCATCTGCTCTTTTCAGGTGTCCTGTTGCTCTAGTACAGAT
GCAGCTCGACCCGAATCGCGCGAGGAGAGGACTGTCCTTAAGCCAGTACA
AAGCCAAGCACCAGCAGACGCAGCCCCTCGTGGGGCCGGTTGGGCCCGAT
GGCCAGGGCGATGGATGCCCTGATCTCGAGAAACTTCTCCGACAATGCTC
CCTCTCCCGCGCGAGCGTGGATGCCATGGCGCAGTGGATCATAACCCACG
AGTCGCGTGTCCGAATTGGACTCGAGACGATCCTGCGGTGAGCACGTGCC
GTACGTTACCGCCCTCGGTCTGCCCGCTGCTTGTCGTACAATCCTTGGCT
GGGCCGCGCGATATGTTGTGCGCGTTCGTGCTCGTTCAAGAACGTTTGCG
GAGCAGTAGCGTTTTTGTCCCCATTCACGCATCCCTCGCGGGGAATGCGC
CGCGTACAGCAGACCTTGTAAACACGGTGCGGGGGGGAGGTGGGCAGTAG
GAGGAGGAGGAGCGAGCGACCCCCGGGGGCTGCCAATCGTGTGTGGCCTC
TGCCGATGTCCGTGGCGCTCCACCATACGTTCGTTTCAAACATTCGTGCC
AGCTGCGGATGGGCAAGTACTTTGAACAGAGTGTCCACGGCGGCCCCGCT
TGCCCCGCATGCTGGATACACCCTTCACCCCCCCTGCCCCCAGCACCCAC
CTCAGTGTATGAGAAATCTTTCACTCCGCCGTCCCAGGACCGGTTCACGG
CACGACCGAAAATAGCCTTGATGAGATGGGGTATTGGCATGGGAGACACC
TGCTCCAAAGTCCAAATCGAAGAGTTGAACATGGCACAAACACACACACA
CACACGTGCACGCGTGCGCGTCGGACGGTGCCTCCTCTGCCCTGGCGAGC
ACTGCGTGAGCAAAACTCCTGTGTACAGTAGTAAATTACTCGGAAGTGCG
TGCAGGTAGGGCGCGTGCACTGTACGACTGTAATCTACCGTACTGTGCGC
AAGGGCAACCAAGTGAGGGTGCAGGAGTTAGGTGCAATGCCGTCGCCCCT
TAGCTCTTTACACGACCACGGTACACCGAGCTCTAGGATTTTGCGAGGAG
CTAGCAGTGTCCTGTAAGGGTAGAAATCTTCGAATGTCAACGGCAGTATC
GGCGTGCTGGGGCATGTTACACACAGTGATGGAATACCGACACGATTTGA
TGTATCGAAGAATGCATCGATATTTCCTTTTTTTGGTATGTATCCATGTA
TCGACGTCCTGGGAAGGCATGTGGGGGAACCGTGGTTTGTGAATGCCAGG
GTACTTGTTTCTGGCACTGGGGGAGGGGCAGGCCGGGTCGATACATGGTC
GATACGTCAATGTATCGACCCACCGTGGGTGTATATATACTCGAGTACGA
GTATATATGTTCTCACGCTGTGCTTGCCGTAGTACCGAGACCATGGACCA
CGCGCCTCTGCCGAGACGGAGCATTTATTTGATATTAGAGTACGTATTGA
TGTGGCATGCGCCCCACTGCTCAAGATTGCATGCCTCTGTAAGTAGCCTT
TGGCATCTGTACCGCTTTGACTTTGTGCTTTTACATGCATGCTATCATTA
AACGCGCCTCACATGATCGTGTGGGTGATGGTACCGGATATTGATGTTTG
CATTTTGTGTATTCCATATGCCATCGCTTTTCCAAGCGTGTTCGACGATT
GCGGCTGAAGTTGGTTTTTCTTTCGTTTTGGCGGCAGTACATAATGTACA
TACACATCCTGTGCACATACTGCACGTGCGCGTACACGGTACTGTAGTAC
TTGTAGCGTGTGAATCGTGTATGCCCTCTGCTGCACAGGTTAGTCGTACA
GTACAGTACACATTCCAGTACAGTAGGTACAGTCTGTTCAATACTTGCAA
GTATCCTCGAGTACAATAGCTGCAACCCCACCGCTGCCCCTCCGCCACTC
CCCCCCATTCCCCCCCGGCCGCTGCGGCCCCCCTCACCTCCCCCAACCAC
CCCTTGTTTGTACTGCACTGTATGCTACTGCATGAGTAGGTATATGCGCG
CCTGGTCCGCAGTCCTCCGGGGCGAGGGCGCCACCGCCGCAGCAGGCATG
GCCAAAGCCGGCAAAAGCGACAG back to topCoding sequence (CDS) from alignment at S-ischiensis_contig87:261920..264042- >mRNA_S-ischiensis_contig87.20251.1 ID=mRNA_S-ischiensis_contig87.20251.1|Name=mRNA_S-ischiensis_contig87.20251.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=738bp|location=Sequence derived from alignment at S-ischiensis_contig87:261920..264042- (Schizocladia ischiensis KU_0333)
GAGGCATCTGCATCTGCTCTTTTCAGGTGTCCTGTTGCTCTAGTACAGAT
GCAGCTCGACCCGAATCGCGCGAGGAGAGGACTGTCCTTAAGCCAGTACA
AAGCCAAGCACCAGCAGACGCAGCCCCTCGTGGGGCCGGTTGGGCCCGAT
GGCCAGGGCGATGGATGCCCTGATCTCGAGAAACTTCTCCGACAATGCTC
CCTCTCCCGCGCGAGCGTGGATGCCATGGCGCAGTGGATCATAACCCACG
AGTCGCGTGTCCGAATTGGACTCGAGACGATCCTGCGGAGGCATCTGCAT
CTGCTCTTTTCAGGTGTCCTGTTGCTCTAGTACAGATGCAGCTCGACCCG
AATCGCGCGAGGAGAGGACTGTCCTTAAGCCAGTACAAAGCCAAGCACCA
GCAGACGCAGCCCCTCGTGGGGCCGGTTGGGCCCGATGGCCAGGGCGATG
GATGCCCTGATCTCGAGAAACTTCTCCGACAATGCTCCCTCTCCCGCGCG
AGCGTGGATGCCATGGCGCAGTGGATCATAACCCACGAGTCGCGTGTCCG
AATTGGACTCGAGACGATCCTGCGGTATATGCGCGCCTGGTCCGCAGTCC
TCCGGGGCGAGGGCGCCACCGCCGCAGCAGGCATGGCCAAAGCCGGCAAA
AGCGACGTATATGCGCGCCTGGTCCGCAGTCCTCCGGGGCGAGGGCGCCA
CCGCCGCAGCAGGCATGGCCAAAGCCGGCAAAAGCGAC back to top
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