mRNA_S-ischiensis_contig87.20234.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig87.20234.1 vs. uniprot
Match: D8LF54_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF54_ECTSI) HSP 1 Score: 110 bits (275), Expect = 4.100e-26 Identity = 57/105 (54.29%), Postives = 73/105 (69.52%), Query Frame = 2
Query: 35 VLATKEHEASAAAASGDVELKVLLDLDMAVLGGERGAYADYAAKIREEYIHVPAETYCEKRAQVLRGFLRTETIFATSAYREGREQAARANIAWEVSVLEQGSIP 349
++ATK H S S D +L+ +DLDMAV+G ER Y YA++IREEYIHVPA+TYC+KRA++LR FL T +IFAT Y+ E AR N+A EV +L G IP
Sbjct: 116 IIATKRHSVSG---SDDQDLRAFIDLDMAVVGRERSGYLTYASQIREEYIHVPADTYCKKRAEILREFLSTGSIFATDEYQRTFEAKARENVAAEVEMLNAGVIP 217
BLAST of mRNA_S-ischiensis_contig87.20234.1 vs. uniprot
Match: A0A1Z5KJ21_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KJ21_FISSO) HSP 1 Score: 92.4 bits (228), Expect = 2.850e-19 Identity = 51/109 (46.79%), Postives = 69/109 (63.30%), Query Frame = 2
Query: 32 LVLATKEHEASAAAASGDVE----LKVLLDLDMAVLGGERGAYADYAAKIREEYIHVPAETYCEKRAQVLRGFLRTETIFATSAYREGREQAARANIAWEVSVLEQGSI 346
++LATK H SGD+ + LDLD++VLG AY YA IR+EY HVP ETYC+KRA +L FL+ + I+ TS +RE E+ AR+N+A E+ +L QG I
Sbjct: 126 MILATKSHH------SGDLSDTSAVAFFLDLDLSVLGKTEEAYQQYAILIRKEYSHVPQETYCQKRADILETFLQQQNIYKTSLFREMFEERARSNLAAEIRLLRQGVI 228
BLAST of mRNA_S-ischiensis_contig87.20234.1 vs. uniprot
Match: A0A1Z5KTL6_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KTL6_FISSO) HSP 1 Score: 87.0 bits (214), Expect = 3.160e-17 Identity = 46/105 (43.81%), Postives = 65/105 (61.90%), Query Frame = 2
Query: 32 LVLATKEHEASAAAASGDVELKVLLDLDMAVLGGERGAYADYAAKIREEYIHVPAETYCEKRAQVLRGFLRTETIFATSAYREGREQAARANIAWEVSVLEQGSI 346
++LATK H + + LDLD++VLG AY YA I++EY HVP ETYC+KRA +L FL+ + I+ T+ +RE E+ AR+N+A E+ L QG I
Sbjct: 126 MILATKSHHSVDPNMKDTSVIAFFLDLDLSVLGKTEEAYQRYAILIQKEYSHVPHETYCQKRADILETFLQQQNIYKTALFREMFEERARSNLAAEIRCLRQGII 230
BLAST of mRNA_S-ischiensis_contig87.20234.1 vs. uniprot
Match: A0A6J7C5B1_9ZZZZ (Unannotated protein n=1 Tax=freshwater metagenome TaxID=449393 RepID=A0A6J7C5B1_9ZZZZ) HSP 1 Score: 82.0 bits (201), Expect = 9.900e-17 Identity = 42/86 (48.84%), Postives = 55/86 (63.95%), Query Frame = 2
Query: 83 DVELKVLLDLDMAVLGGERGAYADYAAKIREEYIHVPAETYCEKRAQVLRGFLRTETIFATSAYREGREQAARANIAWEVSVLEQG 340
DV+ VL+D D+AVLGGE G YA Y +R+EY HVP +T+ RA VL GFL+ + IF T RE ARAN+ E++ L +G
Sbjct: 11 DVDSAVLIDADLAVLGGEPGVYAAYVRGVRDEYAHVPNDTWRSGRAAVLEGFLQRDAIFTTPFMHAQREARARANLTAELTTLSRG 96
BLAST of mRNA_S-ischiensis_contig87.20234.1 vs. uniprot
Match: A0A6I3ENT5_9ACTN (Metal-dependent phosphohydrolase n=2 Tax=root TaxID=1 RepID=A0A6I3ENT5_9ACTN) HSP 1 Score: 84.3 bits (207), Expect = 2.220e-16 Identity = 47/103 (45.63%), Postives = 61/103 (59.22%), Query Frame = 2
Query: 32 LVLATKEHEASAAAASGDVELKVLLDLDMAVLGGERGAYADYAAKIREEYIHVPAETYCEKRAQVLRGFLRTETIFATSAYREGREQAARANIAWEVSVLEQG 340
LV AT +H DV+ VL+D D+AVLGGE G YA Y +R+EY HVP +T+ RA VL GFL+ + IF T RE ARAN+ E++ L +G
Sbjct: 118 LVFATADHSVF------DVDSAVLIDADLAVLGGEPGVYAAYVRGVRDEYAHVPNDTWRSGRAAVLEGFLQRDAIFTTPFMHAQREARARANLTAELTTLSRG 214
BLAST of mRNA_S-ischiensis_contig87.20234.1 vs. uniprot
Match: A0A399DUA4_9DEIN (Uncharacterized protein n=2 Tax=Calidithermus TaxID=2747271 RepID=A0A399DUA4_9DEIN) HSP 1 Score: 83.6 bits (205), Expect = 4.940e-16 Identity = 47/106 (44.34%), Postives = 62/106 (58.49%), Query Frame = 2
Query: 20 RVVALVLATKEHEASAAAASGDVELKVLLDLDMAVLGGERGAYADYAAKIREEYIHVPAETYCEKRAQVLRGFLRTETIFATSAYREGREQAARANIAWEVSVLEQ 337
RV +VLATK H S D ++LLD D+++LG E Y Y+ IR+EY VP E Y E R +VL FL ++ T A+ G E+AARAN+ WE+ LEQ
Sbjct: 114 RVSGMVLATKHHR------SDDPTTRLLLDADLSILGAEEAVYRRYSRAIRQEYAWVPPEAYREGRLRVLHAFLSRPQVYVTPAF-AGLEEAARANLRWEIGWLEQ 212
BLAST of mRNA_S-ischiensis_contig87.20234.1 vs. uniprot
Match: UPI000A35EE9E (hypothetical protein n=1 Tax=Oceanospirillum sanctuarii TaxID=1434821 RepID=UPI000A35EE9E) HSP 1 Score: 81.3 bits (199), Expect = 3.550e-15 Identity = 46/114 (40.35%), Postives = 68/114 (59.65%), Query Frame = 2
Query: 17 ERVVALVLATKEHEA---SAAAASGDVELKVLLDLDMAVLGGERGAYADYAAKIREEYIHVPAETYCEKRAQVLRGFLRTETIFATSAYREGREQAARANIAWEVSVLEQGSIP 349
ERV L++AT H A + A+ + +LD+D+A+LG Y Y IR EY VP YC+KRA++L+GFL+ +++ T +R REQ AR N++W + L QG+IP
Sbjct: 106 ERVYQLIMATC-HGALPDTDLQAASHPDQNWMLDIDLAILGAPFDGYRAYEQAIRNEYREVPLAIYCQKRAELLKGFLQEASLYQTEVFRIEREQQARDNLSWAIESLVQGAIP 218
BLAST of mRNA_S-ischiensis_contig87.20234.1 vs. uniprot
Match: UPI00191940B5 (N-methyl-D-aspartate receptor NMDAR2C subunit n=1 Tax=Ramlibacter alkalitolerans TaxID=2039631 RepID=UPI00191940B5) HSP 1 Score: 80.9 bits (198), Expect = 3.790e-15 Identity = 46/111 (41.44%), Postives = 66/111 (59.46%), Query Frame = 2
Query: 5 GEDI-ERVVALVLATKEHEASAAAASGDVELKVLLDLDMAVLGGERGAYADYAAKIREEYIHVPAETYCEKRAQVLRGFLRTETIFATSAYREGREQAARANIAWEVSVLE 334
GED+ +RV ALVLAT+ H A S D + ++LLD+D+A+LG + DY +IR EY HVP + +RAQVL FL I+ T A+ + E AR N+ ++ L+
Sbjct: 100 GEDVAQRVQALVLATRGH-----AESDDADTRLLLDIDLAILGAAPARFDDYEDQIRAEYAHVPGPEFRARRAQVLESFLERPRIYLTPAFHDALEHRARENLGRSLAALQ 205
BLAST of mRNA_S-ischiensis_contig87.20234.1 vs. uniprot
Match: A0A2W6ZWF3_9CYAN (N-methyl-D-aspartate receptor NMDAR2C subunit n=1 Tax=Leptolyngbya sp. TaxID=47254 RepID=A0A2W6ZWF3_9CYAN) HSP 1 Score: 80.9 bits (198), Expect = 4.500e-15 Identity = 43/117 (36.75%), Postives = 76/117 (64.96%), Query Frame = 2
Query: 2 GGEDI--ERVVALVLATKEHEASAAAASGDVELKVLLDLDMAVLGGERGAYADYAAKIREEYIHVPAETYCEKRAQVLRGFLRTETIFATSAYREGREQAARANIAWEVSVLEQGSI 346
GGE+ + V A++LAT+ AAA +++++++D+D+A+LG +A Y A+IR+EY+ VP +C++RA++L+G+L TIF +RE E A+ N+ +++L+QG I
Sbjct: 98 GGENSLQQSVHAMILATQH-----AAAPTTLDMRLVVDIDLAILGAAGDRFAQYEAQIRQEYLWVPGPVFCQRRAEMLQGWLNRPTIFTVDCFRERLEHQAQQNLRRSLTLLKQGPI 209
BLAST of mRNA_S-ischiensis_contig87.20234.1 vs. uniprot
Match: A0A8J6UWF7_9CYAN (N-methyl-D-aspartate receptor NMDAR2C subunit n=1 Tax=Nodosilinea sp. FACHB-131 TaxID=2692832 RepID=A0A8J6UWF7_9CYAN) HSP 1 Score: 80.5 bits (197), Expect = 1.040e-14 Identity = 47/116 (40.52%), Postives = 74/116 (63.79%), Query Frame = 2
Query: 2 GGEDI--ERVVALVLATKEHEASAAAASGDVELKVLLDLDMAVLGGERGAYADYAAKIREEYIHVPAETYCEKRAQVLRGFLRTETIFATSAYREGREQAARANIAWEVSVLEQGS 343
GGED+ V L+LATK H+A V++ +++D+D+AVLG E +A Y A+IR+EY VP + +C+KRA++L+ FL IF T+ ++E E A+ N+ ++VL +GS
Sbjct: 133 GGEDLLQRSVHDLILATK-HDAI----PSTVDMGLVVDIDLAVLGAEVDRFAQYDAQIRQEYAWVPEDVFCQKRAEILQSFLNRPAIFTTNFFQERLEHQAQRNLHRSLTVLMKGS 243 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig87.20234.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig87.20234.1 >prot_S-ischiensis_contig87.20234.1 ID=prot_S-ischiensis_contig87.20234.1|Name=mRNA_S-ischiensis_contig87.20234.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=87bp MAVLGGERGAYADYAAKIREEYIHVPAETYCEKRAQVLRGFLRTETIFATback to top mRNA from alignment at S-ischiensis_contig87:129440..131340+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig87.20234.1 ID=mRNA_S-ischiensis_contig87.20234.1|Name=mRNA_S-ischiensis_contig87.20234.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1901bp|location=Sequence derived from alignment at S-ischiensis_contig87:129440..131340+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig87:129440..131340+ >mRNA_S-ischiensis_contig87.20234.1 ID=mRNA_S-ischiensis_contig87.20234.1|Name=mRNA_S-ischiensis_contig87.20234.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=522bp|location=Sequence derived from alignment at S-ischiensis_contig87:129440..131340+ (Schizocladia ischiensis KU_0333)back to top |