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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 1210 |
| Cds size | 666 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817346.6826441-UTR-S-ischiensis_contig86:452321..452584 | 1622817346.6826441-UTR-S-ischiensis_contig86:452321..452584 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig86 452322..452584 + |
| 1695741045.0211208-UTR-S-ischiensis_contig86:452321..452584 | 1695741045.0211208-UTR-S-ischiensis_contig86:452321..452584 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig86 452322..452584 + |
| 1622817346.7076783-UTR-S-ischiensis_contig86:453250..453531 | 1622817346.7076783-UTR-S-ischiensis_contig86:453250..453531 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig86 453251..453531 + |
| 1695741045.0482972-UTR-S-ischiensis_contig86:453250..453531 | 1695741045.0482972-UTR-S-ischiensis_contig86:453250..453531 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig86 453251..453531 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817346.6955354-CDS-S-ischiensis_contig86:452584..453250 | 1622817346.6955354-CDS-S-ischiensis_contig86:452584..453250 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig86 452585..453250 + |
| 1695741045.032112-CDS-S-ischiensis_contig86:452584..453250 | 1695741045.032112-CDS-S-ischiensis_contig86:452584..453250 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig86 452585..453250 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig86.20206.1 >prot_S-ischiensis_contig86.20206.1 ID=prot_S-ischiensis_contig86.20206.1|Name=mRNA_S-ischiensis_contig86.20206.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=222bp
MAREARGPLSVHTHSSSVYCCCCTVQYGTHCTSNLKTLVQHFFSPATVLT
SLRRGQRRAVNRDARDYSERKVTAHFTNCIHTTLYIHTYYTIHTYFEVLL
VHSLASKHVSQHLSSTVQSTWAGRPRPPIQSVSRAPRPTQAVYAQATPRH
GPGRRSCASRSKHSTLHKKGWPPLLGTSAAYSPGRTAAARCCCTVTRSAT
GTRVLYSTSTYNVRPATWRKS* back to topmRNA from alignment at S-ischiensis_contig86:452322..453531+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig86.20206.1 ID=mRNA_S-ischiensis_contig86.20206.1|Name=mRNA_S-ischiensis_contig86.20206.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1210bp|location=Sequence derived from alignment at S-ischiensis_contig86:452322..453531+ (Schizocladia ischiensis KU_0333)
CCGGTATATTACTCACACTGTGCTTGCTGTAGTCCCGATACCATTAACCA
CGCGCCGTTGAGGACGGAGCATTCTCCTCCCGCCCCTGGCAAGCCAGGGC
GCAAGCCAGGGTGGGAGGGAGGGACCATCCCCCAGTGCATGGTGGGGGAG
TGGTTGGGTGCGTACTCTAACTCTAGTGCTTCCGGAAGTACTCTACAACA
ACTCTATAGGGAAAAACGGCCAGATGCACGCCGAGCCAAAGGGGGGTCGC
GGTCTTCTACACAATGGCGCGCGAGGCTCGAGGCCCCTTATCGGTCCATA
CACACTCGAGTAGTGTGTATTGCTGCTGCTGTACAGTACAATACGGCACA
CATTGTACTTCAAACTTGAAAACGCTGGTACAGCACTTCTTTTCGCCGGC
TACCGTGCTCACAAGTTTACGTCGGGGCCAGAGGCGCGCGGTCAATCGTG
ACGCTAGGGACTACAGCGAGCGCAAGGTGACTGCACACTTTACAAATTGT
ATACATACTACACTATACATACATACATACTACACTATACATACATACTT
CGAAGTACTGCTCGTACACAGTCTTGCTTCCAAGCATGTGTCGCAGCACC
TGAGCTCTACCGTACAAAGTACCTGGGCCGGCCGCCCCCGGCCGCCGATT
CAATCCGTTTCGCGAGCGCCCCGTCCCACCCAGGCTGTGTACGCACAAGC
CACGCCCCGACACGGCCCAGGGCGCCGTTCGTGTGCGTCTCGTTCTAAAC
ACAGTACACTACACAAAAAGGGGTGGCCGCCCCTCCTCGGAACTTCGGCA
GCCTATAGCCCTGGCAGGACGGCGGCAGCACGCTGCTGCTGTACAGTGAC
TCGGAGCGCCACAGGTACTCGTGTACTGTACAGTACGAGCACGTATAACG
TGCGTCCGGCTACGTGGCGCAAGTCTTAGAGCCGCCCCTCTCCGCGTAGT
TTCTCTTTGTGCTTTTTCCAACCCTGCGGGTGAAAGGGGGGGCTTCTTCT
GGTGGGGTGCGGCGTTTGGGACAGGGCCCCACAGCTCGCCCCACGCGTGT
TTCCACTTCCGAGCTACAGTCGCATGACAGCACAACGGCCTGAGTCCACC
GCTAAACTCCTCAGGCCATACATAGTTAAGCGGGTCGATACGGAGGTCCT
CAAACGGGATACTTGTACAACTGAGTTCGCTCCTCTCGGGGGCCCCTTGC
GCCCACCCAC back to topCoding sequence (CDS) from alignment at S-ischiensis_contig86:452322..453531+ >mRNA_S-ischiensis_contig86.20206.1 ID=mRNA_S-ischiensis_contig86.20206.1|Name=mRNA_S-ischiensis_contig86.20206.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1332bp|location=Sequence derived from alignment at S-ischiensis_contig86:452322..453531+ (Schizocladia ischiensis KU_0333)
ATGGCGCGCGAGGCTCGAGGCCCCTTATCGGTCCATACACACTCGAGTAG
TGTGTATTGCTGCTGCTGTACAGTACAATACGGCACACATTGTACTTCAA
ACTTGAAAACGCTGGTACAGCACTTCTTTTCGCCGGCTACCGTGCTCACA
AGTTTACGTCGGGGCCAGAGGCGCGCGGTCAATCGTGACGCTAGGGACTA
CAGCGAGCGCAAGGTGACTGCACACTTTACAAATTGTATACATACTACAC
TATACATACATACATACTACACTATACATACATACTTCGAAGTACTGCTC
GTACACAGTCTTGCTTCCAAGCATGTGTCGCAGCACCTGAGCTCTACCGT
ACAAAGTACCTGGGCCGGCCGCCCCCGGCCGCCGATTCAATCCGTTTCGC
GAGCGCCCCGTCCCACCCAGGCTGTGTACGCACAAGCCACGCCCCGACAC
GGCCCAGGGCGCCGTTCGTGTGCGTCTCGTTCTAAACACAGTACACTACA
CAAAAAGGGGTGGCCGCCCCTCCTCGGAACTTCGGCAGCCTATAGCCCTG
GCAGGACGGCGGCAGCACGCTGCTGCTGTACAGTGACTCGGAGCGCCACA
GGTACTCGTGTACTGTACAGTACGAGCACGTATAACGTGCGTCCGGCTAC
GTGGCGCAAGTCTTAGATGGCGCGCGAGGCTCGAGGCCCCTTATCGGTCC
ATACACACTCGAGTAGTGTGTATTGCTGCTGCTGTACAGTACAATACGGC
ACACATTGTACTTCAAACTTGAAAACGCTGGTACAGCACTTCTTTTCGCC
GGCTACCGTGCTCACAAGTTTACGTCGGGGCCAGAGGCGCGCGGTCAATC
GTGACGCTAGGGACTACAGCGAGCGCAAGGTGACTGCACACTTTACAAAT
TGTATACATACTACACTATACATACATACATACTACACTATACATACATA
CTTCGAAGTACTGCTCGTACACAGTCTTGCTTCCAAGCATGTGTCGCAGC
ACCTGAGCTCTACCGTACAAAGTACCTGGGCCGGCCGCCCCCGGCCGCCG
ATTCAATCCGTTTCGCGAGCGCCCCGTCCCACCCAGGCTGTGTACGCACA
AGCCACGCCCCGACACGGCCCAGGGCGCCGTTCGTGTGCGTCTCGTTCTA
AACACAGTACACTACACAAAAAGGGGTGGCCGCCCCTCCTCGGAACTTCG
GCAGCCTATAGCCCTGGCAGGACGGCGGCAGCACGCTGCTGCTGTACAGT
GACTCGGAGCGCCACAGGTACTCGTGTACTGTACAGTACGAGCACGTATA
ACGTGCGTCCGGCTACGTGGCGCAAGTCTTAG back to top
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