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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 320 |
| Cds size | 318 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817345.4678607-CDS-S-ischiensis_contig86:108628..108691 | 1622817345.4678607-CDS-S-ischiensis_contig86:108628..108691 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig86 108629..108691 - |
| 1695741044.2051175-CDS-S-ischiensis_contig86:108628..108691 | 1695741044.2051175-CDS-S-ischiensis_contig86:108628..108691 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig86 108629..108691 - |
| 1622817345.4806802-CDS-S-ischiensis_contig86:109339..109537 | 1622817345.4806802-CDS-S-ischiensis_contig86:109339..109537 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig86 109340..109537 - |
| 1695741044.2151368-CDS-S-ischiensis_contig86:109339..109537 | 1695741044.2151368-CDS-S-ischiensis_contig86:109339..109537 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig86 109340..109537 - |
| 1622817345.4933472-CDS-S-ischiensis_contig86:110587..110644 | 1622817345.4933472-CDS-S-ischiensis_contig86:110587..110644 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig86 110588..110644 - |
| 1695741044.2283907-CDS-S-ischiensis_contig86:110587..110644 | 1695741044.2283907-CDS-S-ischiensis_contig86:110587..110644 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig86 110588..110644 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig86.20185.1 >prot_S-ischiensis_contig86.20185.1 ID=prot_S-ischiensis_contig86.20185.1|Name=mRNA_S-ischiensis_contig86.20185.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=106bp
GSSEGHRVGEQSWVLWRPEVEDPPLATLSLHPWEATSVSTAHPGKKRPCS
PPTTHTLLPQRAPGARPPTTATVAAAAATTTIGEEVERKGAVAAAETDAR
EAASLR back to topmRNA from alignment at S-ischiensis_contig86:108628..110644- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig86.20185.1 ID=mRNA_S-ischiensis_contig86.20185.1|Name=mRNA_S-ischiensis_contig86.20185.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=2017bp|location=Sequence derived from alignment at S-ischiensis_contig86:108628..110644- (Schizocladia ischiensis KU_0333)
GGTAGCAGTGAAGGCCACCGCGTGGGAGAGCAGAGCTGGGTGTTGTGGAG
GCCTGAGGTGAGTACTCCGTATACACTATGTACCGTAATCGTCGGAGAGA
TTTTGCCCCCACGGGGCAATTTTCGGGGCAAATGTTTCTGGCCGGGAAGG
TCCTGAATTGTCCCGAGAGCTCTCGGAGAAGTTCCCCCAGGTCCTGAGGG
AGATTTTCCGAGTTTTCCCTGCGTGAAGAATCCGACCAGTATTCGGCGAG
AAAAGCTCTCCCGAAATTGGCATGGGGGGGCAAGATCTCTCTGATGATTG
TGGTACTACGTAGTATGTGTGCTCATGCTGTGCCGGCCGCATTCCCGAGA
CCATTGTCCCCGCGCCTCGACCGAGACGGAGCAGGCCCCCTCCCTCCCCC
GGCAGAGCCAGGGTGGTATGGCGGTACATATATACTCGAGTATATATATA
TATATATATATATGTGTACTCACGTGGTGCTTGCCGTAGTCCCGAGACCA
TTGACCCCGCGCCTCGTTCGAGGCGCCTCGTTCGAGGCGGAGCATTCGAG
TTATGCATACACGAGTATGTACTTGTATTGTGTGTGAGTTTTACATGTGC
TTCAAAGTACTCACTTCGAGTACATACTGCGTAGCATATACGACTTATTT
ATGCACGAGTATGTACCTATATTGCACGTGAGTTTTGCACGTGCTTCAAA
GTACTCGCTACGAGTACATATGTATATACGAGGTATGTACAAACGAGTAT
GTGCCTATATTGCATGTTAGTTTTATACGTGCTCCAAAGTACTCACTACG
AGTACATGTGTGTACGAGTGATGTATACACAAATAATGTACTTGTATTGC
CTGTGCGTTTTACACGTGCTTCAAAGTACTCACTGTCATTTTGTAACTGT
TGCCCCCCTCACCAATGATGCAACTGTCAATTTTGTAACTGTTGCCCCCC
TCACCAATTATGGAACTGTCAATGATGTACTCGAGCAACTGTCATTATGC
AACGGTGGCCCCCCTCACCAATTATGTAGCTGTCAATTGTGTAGCTGTTG
CCCCCCTCACCAATATGTAACTGTCAATTCTGCAACTGTCGTTTTTAACT
GTTCAAGGTGGAGGACCCTCCTCTGGCCACCCTGTCCCTGCACCCCTGGG
AGGCCACCAGCGTGTCCACCGCCCACCCTGGAAAAAAACGGCCCTGCAGC
CCTCCGACAACACACACGCTCCTCCCGCAAAGGGCTCCGGGCGCCCGCCC
CCCCACCACCGCCACCGTCGCCGCCGCCGCCGCCACAACCACCATCGGAG
AGGAGGTAAAGTACGGCCCCTGCCATAAGTGCTGGGAGTATCTGAGCAAA
TCAACCTATTTATCGAAGTGGTGATCTATTTTGAGTGGTAGATAAGCGGC
GAGTTCCAGGCCCTGTGCCAAAAGGCGCGTCATTAAACAGGACTCGCCGA
AGCCCTTGCCGAAGCCCTTCCTTCCCTCGCAGGGCAAGGAGAAAACAGAA
AATAGATCTATCGATAGTCGATATTCGATAGTTTGACCCACACTAAATCC
AAGTACTGTATGATAAGGAACAACACGGGGCGCGGTGCGGGCCACGTCAC
TAGAGACCTCAGCAGTGGCCCTTCCTTAGCTCTCCAAGTACTGTAGCTAG
TAGCGCCGCCCACAAATTCAGTAATCGAGCCTGATAACTATCTACTGATG
GATATTCCATCACTGCCTGATGTCGGCGCTGCTTGGGCCGCCACAGGGGC
CGGGTCCCGGGCCTCCTGCGTGTGACACTTGGGGAGATTCAGAGGCGTTT
GCTGCGGCCGTGAAGCCACAGGTGTATAGAGTTCTGCATTCATGCCGAAA
AGCGTCCATATCAAGTGTTCAGTATTTCCAGCGATTTTCAATCAATATTC
AATATTTCATCGATCGGATGATCAATATTTTTTATCAATGCTGAACTCTA
CAGGTGGAGCGGAAGGGGGCGGTGGCGGCAGCGGAGACGGATGCGAGGGA
GGCTGCGTCGCTGCGGG back to topCoding sequence (CDS) from alignment at S-ischiensis_contig86:108628..110644- >mRNA_S-ischiensis_contig86.20185.1 ID=mRNA_S-ischiensis_contig86.20185.1|Name=mRNA_S-ischiensis_contig86.20185.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=636bp|location=Sequence derived from alignment at S-ischiensis_contig86:108628..110644- (Schizocladia ischiensis KU_0333)
GGTAGCAGTGAAGGCCACCGCGTGGGAGAGCAGAGCTGGGTGTTGTGGAG
GCCTGAGGGTAGCAGTGAAGGCCACCGCGTGGGAGAGCAGAGCTGGGTGT
TGTGGAGGCCTGAGGTGGAGGACCCTCCTCTGGCCACCCTGTCCCTGCAC
CCCTGGGAGGCCACCAGCGTGTCCACCGCCCACCCTGGAAAAAAACGGCC
CTGCAGCCCTCCGACAACACACACGCTCCTCCCGCAAAGGGCTCCGGGCG
CCCGCCCCCCCACCACCGCCACCGTCGCCGCCGCCGCCGCCACAACCACC
ATCGGAGAGGAGGTGGAGGACCCTCCTCTGGCCACCCTGTCCCTGCACCC
CTGGGAGGCCACCAGCGTGTCCACCGCCCACCCTGGAAAAAAACGGCCCT
GCAGCCCTCCGACAACACACACGCTCCTCCCGCAAAGGGCTCCGGGCGCC
CGCCCCCCCACCACCGCCACCGTCGCCGCCGCCGCCGCCACAACCACCAT
CGGAGAGGAGGTGGAGCGGAAGGGGGCGGTGGCGGCAGCGGAGACGGATG
CGAGGGAGGCTGCGTCGCTGCGGGTGGAGCGGAAGGGGGCGGTGGCGGCA
GCGGAGACGGATGCGAGGGAGGCTGCGTCGCTGCGG back to top
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