mRNA_S-ischiensis_contig85.20170.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig85.20170.1 vs. uniprot
Match: D7FQS8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQS8_ECTSI) HSP 1 Score: 752 bits (1941), Expect = 8.410e-256 Identity = 392/800 (49.00%), Postives = 540/800 (67.50%), Query Frame = 3
Query: 312 MDLHLRSLYACFEGAEKDAVDYRDIVCCVRFLQHHRGLRENPRRLLTRWIDMFSV-AGQWIARRDALRLVRMGAVTDADVRETSGRLDRYLTEAAPEQGLKPNFQRVSVSVLMEILENNPSLTESFRTQLWQLLPGEWRLDLLHAKEEQRFQKVGHNLIAMKHKRAMAWHAKAVCKRHFQAWLAFWDVAKRQKEQRRTVSDRSRRITLRRWCTWAGQASAARRKSAAAAEFAKNLVLRRYLTRIRQHVTSAKKVRALTWRSSKHGKQVMAGVGVLRSVLRVRSQRAALRHWRETASLLSAWDFAESLAAEKMSRRAFNELRDLVQALAAQRRADREAEERAEQLAAAVQFAEEEKRMLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKVLARQRQARRRRVYEERVQVQKDFEEAWDVRVREMADREMAVCRAGLDSNDQVTQLRIEKELKVVKRKFFAAPSPETADLERALQDPANVIFAHMAHKLYEKGLTLKQFFHQFDQGGDGYLAYDEFKVMVTSLGIKLTGEQIRAVLRSIDLDGGGFIDFPEFEAALSRHEEVCGVAGSPWKMYVNPVHAVMTFHNVITDEEIWDYKAKDADLVNVIKDNIVGVEGIRARELGKEQQAQAWEDLQLHRAATVLQRQYRVWAARRKRSLVRWKAEAEAAKVKSKAANLSATTMQCWWRGMRAKWRALALLDVTIETLCDPGSRTRYYFNHCTKDAAWKPPFMLRRWKGAGTHLQGVPGWIYIIRAYGEAFYFNTKSGDRQEDKPTGYMRCMACNIQLATK 2708
MD LRSLY C+EGA AVDYRDI+CC L+ + +R+NPR+L I ++S G+ + R+DALR++R+GA+ + +TS RLD+YL E A +GLKP F+ + ++ LM+ +E NPS+ +FRTQLWQ +P WRL +L A E F+K +AMK +RA+ W+ K + +R W F + AK+ + QR + + RR TLR W A R++ A ++ + LRRY I ++V K++ A+ W+ SK GK VMAGVG+LR VLR RS R AL+ W ETASL++AW FA LA E++ RR F LRD V+A RRA+ EAE RA LA +++ AE E+ +LA +VL RQR+ARRRRVYE RV+V+ DF+ AW+V++RE +REM + + L + D +++KE+K++KRKF+AAP PETA+LERAL+DPAN IFAHMA+ +Y++ TL+ FF+QFD+ GDGYL ++EFK MV+SL +KL+ EQIR+V+R+IDLDGGGFIDFPEFEAA+ RHE+VCG AGS WKMYV+PVHA+MTFHNV T+E +WDYKA D DL+ V+KDNIVG+EGI A++ E + + WE+L +RAAT +QRQY WAAR++R+L+RWK + E A+ K++ L AT +QCWWR +RAKW AL LL +TIE L DPG +YYFNH + AAW+ P MLRRW+G G + VP W+ I R +G+++++NT+S RQ++KP GY+RC +C QLA++
Sbjct: 1 MDTRLRSLYECYEGARAGAVDYRDILCCTIVLRRFKDIRDNPRKLFRDLILLYSDDEGEVVRRQDALRVMRIGALHGGHILQTSTRLDKYLAEEARPRGLKPTFRDLDITFLMDTIEANPSILVAFRTQLWQRIPEAWRLGVLQAVEAMGFEKASSGAMAMKERRAVRWYTKTLSRRIIVGWKVFRNRAKQIRAQRERIQNVRRRQTLRAWHASAAIHVLRRKRRGVADQYGRICTLRRYFYSIVKYVEVNKRLAAVAWKFSKQGKLVMAGVGLLRGVLRKRSMRLALQAWCETASLMNAWGFAVDLAGERLCRRVFAALRDTVRAAVVARRAEDEAEMRAAALAESIEEAERERVLLAELAEERKKRQKAEEKAALMARRAAEHVEKIEAARAGSVARDAEVLQRQREARRRRVYENRVKVKNDFDAAWEVKLRETVEREMELAKEWL-ATDPEAPFKVQKEMKILKRKFYAAPLPETAELERALRDPANYIFAHMANLIYKENKTLQMFFNQFDKEGDGYLTHEEFKGMVSSLNVKLSREQIRSVIRTIDLDGGGFIDFPEFEAAVKRHEDVCGQAGSVWKMYVSPVHAIMTFHNVETNEILWDYKATDKDLLRVVKDNIVGLEGIEAKKRAVEDREKEWEELLRNRAATTMQRQYHAWAARKRRALLRWKWDVEKARAKNRETTLMATRIQCWWRILRAKWLALQLLQITIEVLWDPGLNQQYYFNHGLEQAAWEVPSMLRRWRGRGAKMPSVPEWVLISRLFGQSYFYNTRSRLRQDEKPAGYLRCSSCQTQLASR 799
BLAST of mRNA_S-ischiensis_contig85.20170.1 vs. uniprot
Match: A0A836CKE2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKE2_9STRA) HSP 1 Score: 320 bits (820), Expect = 1.090e-88 Identity = 245/655 (37.40%), Postives = 351/655 (53.59%), Query Frame = 3
Query: 309 KMDLHLRSLYACFEGAEKDAVDYRDIVCCVRFLQHHRGLRENPRRLLTRWIDMFSV-AGQWIARRDALRLVRMGAVTDADVRETSGRLDRYLTEAAPEQGLKPNFQR--------------VSVSVLMEILENNPSLTESFRTQLWQLLPGEWRLDLLHAKEEQRFQKVGHNLIAMKHKRAMAWHAKAVCKRHFQAWLAFWDVAKRQKEQRRTV---------------------------------SDRSRRITLRRWCTWAGQASAARRKSAAAAEFAKNLVLRRYLTRIRQHVTSAKKVRALTWRSSKHGKQVMAGVGVLRSVLRVRSQRAALRHWRETASLLSAWDFAESLAAEKMSRRAFNELRDLVQALAAQRRADREAEERAEQLAAAVQFAEEEKRMLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKVLARQRQARRRRVYEERVQVQKDFEEAWDVRVREM-ADREMAVCRAGLDSNDQVTQLRIEKELKVVKRKFFAAPSPETADLERALQDPANVIFAHMAHKLYEKGLTLKQFFHQFDQGGDGYLAYDEFKVMVTSLGIKLTGEQIRAVLRSIDLDGGGFIDFPEFEAALSRHEEVCGVAGSPWKMYVNPVHAVMTFHNVITDEEIWD 2126
+ + LR+LY +GA + AVD R+I L+ HR +RE+PR+LL ++F+ G+ +AR DAL++V + A T DV T+G++DR+L E A LKP F+ VS+ + +++L+ + +L + + +W +P +WRL L E+ ++ L A+K RA A +A+ H++AW F + + ++ QR TV + R R+ L + +A+ R+ A A + R L R + ++ +V W SS GK+V+ GV R+V R QR+ALR W ETASL+SAWDFA + + E+ RRAF LR V +QRR + E XXXXXXXXXXXXXXXXXXXXXXXXX VL Q+ ARR+RV ++ + + W V E+ A C + +EK + ++R+F AAPSPETA LERAL DPAN++FA +A +L+ + +TL+ FF++FD DGYLA EF+ +V SLGI+L GE++RA+ RSID DGGG ID EF+AA++RHE+VCG AGSPWKMYV+PVH VMT H++ T E+ D
Sbjct: 468 RAEQRLRALYRAHDGAAQGAVDLREIAAGALLLRQHRLIRESPRQLLVALCELFTKDGGELLARSDALKVVSLAATTATDVYLTAGKMDRHLEEMAASYNLKPTFKMLPVSPAGRGARDAAVSLDLFLDVLDTHTALLSAIASTMWARVPAQWRLTCLQEAEDAGIGRLSAALSAIKAARAAAHRRRALVGAHWRAWRRFAERCRVERHQRETVLRCRCAXXXXXXXXXXXXXXXXXXXXNAAAAMGAGRILRLRLAQLRAATAEAAQRLRRGALAVSDTE-----RCLRRCGRAASARHRVTRALWTSSAAGKRVLLGVARWRAVERRARQRSALRRWCETASLMSAWDFAVATSGERPRRRAFRALRAYVAHALSQRRLETEXXXXXXXXXXXXXXXXXXXXXXXLAEEAQERARXXXXXXXXXXXXXXXXXXXXXXXXXAGVARERAVLQEQQAARRQRVRDQAAAALEQHKAYWAVHTEELVAAARRRRCEWLSGGGGDAARYEVEKGVAALRRRFLAAPSPETAQLERALADPANIVFAFVASRLWSRHVTLRDFFNEFDVEHDGYLAPAEFETLVASLGIQLDGEKVRAMTRSIDADGGGLIDCDEFQAAMARHEQVCGHAGSPWKMYVSPVHGVMTLHSIETGEQRLD 1117
BLAST of mRNA_S-ischiensis_contig85.20170.1 vs. uniprot
Match: F0YL46_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YL46_AURAN) HSP 1 Score: 258 bits (658), Expect = 2.170e-68 Identity = 225/893 (25.20%), Postives = 387/893 (43.34%), Query Frame = 3
Query: 123 EEERRIRKWWAVKLLHHVVSDEAYRYHSLERAMDSVAGAGF-----VVSQAELVAGMMGQYQFDRALKMDLHLRSLYACFEGAEKDAVDYRDIVCCVRFLQHHRGLRENPRRLLTRWIDMFSVA---GQWIARRDALRLVRMGAVTDADVRETSGRLDRYLTEAAPEQGLKPNFQRVSVSVLMEILENNPSLTESFRTQLWQLLPGEWRLDLLHAKEEQRFQKVGHNLIAMKHKRAMAWHAKAVCKRHFQAWLAFWDVAKRQKEQRRTVSDRSRRITLRRWCTWAGQASAA-RRKSAAAAEFAKNLVLRRYLTRIRQHVTSAKKVRALTWRSSKHGKQVMAGVGVLRSVLRVRSQRAALRHWRETASLLSAWDFAESLAAEKMSRRAFNELRDLVQALAAQRRADREAEERAEQLAAAVQFAEEEKRMLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKVLARQRQARRRRVYEERVQVQKDFEEAWDVRVREMADREMAVCRAGLDSNDQVTQLRIEKELKVVKRKFFAAPSPETADLERALQDPANVIFAHMAHKLYEKGLTLKQFFHQFDQGGDGYLAYDEFKVMVTSLGIKLTGEQIRAVLRSIDLDGGGFIDFPEFEAALSRHEEVCGVAGSPWKMYVNPVHAVMTFHNVITDEEIWDYKAKDADLVNVIKDNIVGVEGIRARELGKEQQAQAWEDLQLHRAATVLQRQYRVWAARRKRSLVRWKAEAEAAKVKSKAANLSATTMQCWWRGMRAKWRALALLDVTIETLCDPGSRTRYYFNHCTKDAAWKPPFMLRRWKGAGTHLQGVPGWI-YIIRAYGEAFYFNTKSGDRQED------KPTGYMRCMACNIQLATKVCETEGRALCFPCYR 2753
+E R KW ++ LH + A+R +E + ++ F + V+ + + F+R + + L LY CF+GAE++ VD+R++VC + + +P +LLT + ++S+ + R D +R++ + A T A+ S ++ +L + V ++ E L P +TE+FR+QLW+ LP +L L +E+ + + K+A+ +++ R F+ W + K QRR V R R + W +A + A+ R+ AA + LV R + R + + ++VR ++ + V G ++R + +R A++ W + S D A L + +++R F V + R A+ ++ L A +Q A +E LA Q+ AR +R+ E + F AW R+ + + R LDS ++ + KE K +KR+F+ P+P + + ER L+ ++++ M L++KG+ ++ F Q+D+ G+L+++EF+ +V L I L+ EQIR V+ ++D D G++ E E AL GV+ SPW+MYV+P V+ +HN+ TDE I++++ D L+ V K N + + A AW ++ + A+ VL R YR + +RR+ + WK +A K + AT +QCWWR + A L D+ + D P RR LQ G I Y++ YF S ++ KP GY RC +C LA C T CF C+R
Sbjct: 5 DEWRHEEKWRLLRYLHSLRQHAAHRCVCVENILWKISPGHFKEHHETIGADLFVSALANGFGFERRVPVHHQLMQLYHCFDGAEENRVDWREVVCSLYAFDSTGHVHSHPIKLLTSFFRLYSLPTTNANIVPRVDVIRMISLAATTHAEFTAVS-QIGHHLPDM------------VKLTAFREALIGTPQVTEAFRSQLWKRLPDLSKLTYLQLQEDATARWFEGYIHQQNMKKAVKLRKQSLLCRSFRGWCQLSKKMRIVKIQRRIVLLRKCRALISWWNLYAVERRASFERRQVAAVLGHRALVRRVVILRWHRWSCNERRVRHISGAFRRRAVDVSHGSFLVRRAMACVYRRDAIQRWSDWIKAASQADGATKLMRKLLAKRFFAGWHSHVHFVKLARTAEEDSIRNQIYLTAMIQGAGQELAATIMADEQNQRSKREDGKQRALSDKLHTLAWKTRRRQAEHAADDRVKLAVQQDARAKRIAENKEDRAASFHAAWAAIERQYIEEQRLATRRWLDSG--ASKNHVSKEFKRIKREFYRPPTPRSMERERNLKALSSIVLIKMEAILFQKGIVMEHFIRQYDEDSSGFLSHNEFRSLVKDLPIDLSAEQIRLVIHTLDSDHDGYVGLKELEKALDIVHAHNGVSASPWRMYVDPAQDVICYHNLATDELIFEHRMSDRKLMEVTKSNFLAETELEAIN-------HAWTRVRENYASVVLARMYRGFKSRRELGRLMWKIQARRQKKDTDRCEKQATRLQCWWRSILA----CQLYDIKLR-----------------HDVEIVPDLFERR-----LCLQRHRGSIDYVLAVEQNQMYFVKWSTSQERAHLRTWAKPPGYQRCTSCLRNLALLECTTTPGVFCFRCFR 849
BLAST of mRNA_S-ischiensis_contig85.20170.1 vs. uniprot
Match: A0A453LS70_AEGTS (Uncharacterized protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453LS70_AEGTS) HSP 1 Score: 57.0 bits (136), Expect = 2.790e-6 Identity = 24/72 (33.33%), Postives = 45/72 (62.50%), Query Frame = 3
Query: 1815 EKGLTLKQFFHQFDQGGDGYLAYDEFKVMVTSLGIKLTGEQIRAVLRSIDLDGGGFIDFPEFEAALSRHEEV 2030
E+ + ++ F FD+ GDG ++ +E + SLG+ T +++ ++R +D+DG G IDF EF + ++R +V
Sbjct: 8 EQMVAFQEAFSLFDKNGDGCISLEELAAVTRSLGLDPTNQELNDMMREVDMDGNGTIDFQEFLSLIARKMQV 79
BLAST of mRNA_S-ischiensis_contig85.20170.1 vs. uniprot
Match: A0A2P1AAW6_9CNID (Calmodulin-like protein n=2 Tax=Scleractinia TaxID=6125 RepID=A0A2P1AAW6_9CNID) HSP 1 Score: 58.9 bits (141), Expect = 3.060e-6 Identity = 28/63 (44.44%), Postives = 42/63 (66.67%), Query Frame = 3
Query: 1830 LKQFFHQFDQGGDGYLAYDEFKVMVTSLGIKLTGEQIRAVLRSIDLDGGGFIDFPEFEAALSR 2018
+++ F FD+ GDG ++ E + ++TSLG KLT E+I ++R DLDG GFID+ EF +S
Sbjct: 87 MREAFRVFDRNGDGQISPMELRNVMTSLGEKLTEEEISEMMREADLDGDGFIDYEEFVHMVSN 149
BLAST of mRNA_S-ischiensis_contig85.20170.1 vs. uniprot
Match: K3ZA12_SETIT (Uncharacterized protein n=14 Tax=Panicoideae TaxID=147369 RepID=K3ZA12_SETIT) HSP 1 Score: 59.3 bits (142), Expect = 3.210e-6 Identity = 26/62 (41.94%), Postives = 41/62 (66.13%), Query Frame = 3
Query: 1830 LKQFFHQFDQGGDGYLAYDEFKVMVTSLGIKLTGEQIRAVLRSIDLDGGGFIDFPEFEAALS 2015
L++ F +FD GDG L E ++ SLG++ TGE++RA+L +D DG G ++F E AA++
Sbjct: 36 LREIFRRFDMDGDGSLTQLELAALLRSLGLRPTGEEVRALLAGMDADGNGAVEFEELAAAIA 97
BLAST of mRNA_S-ischiensis_contig85.20170.1 vs. uniprot
Match: A0A843UH47_COLES (Uncharacterized protein n=1 Tax=Colocasia esculenta TaxID=4460 RepID=A0A843UH47_COLES) HSP 1 Score: 58.5 bits (140), Expect = 4.150e-6 Identity = 26/62 (41.94%), Postives = 41/62 (66.13%), Query Frame = 3
Query: 1830 LKQFFHQFDQGGDGYLAYDEFKVMVTSLGIKLTGEQIRAVLRSIDLDGGGFIDFPEFEAALS 2015
LK+ F +FD DG L + E ++ SLG+K TG+Q+RA+L +D +G G ++F E AA++
Sbjct: 15 LKEIFDRFDMDADGSLTHLELAALLRSLGVKPTGDQVRALLSEMDANGNGAVEFEELAAAIA 76
BLAST of mRNA_S-ischiensis_contig85.20170.1 vs. uniprot
Match: I1GNF7_BRADI (Uncharacterized protein n=7 Tax=BOP clade TaxID=359160 RepID=I1GNF7_BRADI) HSP 1 Score: 57.8 bits (138), Expect = 6.090e-6 Identity = 35/124 (28.23%), Postives = 64/124 (51.61%), Query Frame = 3
Query: 1815 EKGLTLKQFFHQFDQGGDGYLAYDEFKVMVTSLGIKLTGEQIRAVLRSIDLDGGGFIDFPEFEAALSRH----------EEVCGVAGSPWKMYVNPVHAVMTFHNV---ITDEEIWDYKAKDAD 2147
E+ + K+ F FD+ GDG ++ +E + SLG++ T +++ ++R +D DG G IDF EF + ++R +E V +++PV N+ +TDEE+ + ++AD
Sbjct: 7 EQMVAFKEAFSLFDKNGDGCISLEELAAVTRSLGLEPTEQELSDMMREVDTDGNGTIDFQEFLSLIARKMKDGDGDEELKEAFEVLDKDQNGFISPVELRTVMINLGEKMTDEEV-EQMIREAD 129
BLAST of mRNA_S-ischiensis_contig85.20170.1 vs. uniprot
Match: UPI000C6E26FE (calmodulin-alpha-like isoform X1 n=2 Tax=Centruroides sculpturatus TaxID=218467 RepID=UPI000C6E26FE) HSP 1 Score: 58.2 bits (139), Expect = 7.700e-6 Identity = 27/75 (36.00%), Postives = 48/75 (64.00%), Query Frame = 3
Query: 1797 MAHKLYEKGLT-LKQFFHQFDQGGDGYLAYDEFKVMVTSLGIKLTGEQIRAVLRSIDLDGGGFIDFPEFEAALSR 2018
MA++L E+ + L++ F FD+ GDGY+ +E ++ SLG T ++ +++ +D+DG G IDFPEF +++
Sbjct: 33 MANELTEEQIAELREAFSVFDKDGDGYVTTEELGTVMRSLGQNPTDAELHDMIKEVDIDGSGSIDFPEFLTLMAK 107
BLAST of mRNA_S-ischiensis_contig85.20170.1 vs. uniprot
Match: A0A3B6KLR2_WHEAT (Calmodulin n=11 Tax=Triticeae TaxID=147389 RepID=A0A3B6KLR2_WHEAT) HSP 1 Score: 57.4 bits (137), Expect = 8.460e-6 Identity = 34/124 (27.42%), Postives = 64/124 (51.61%), Query Frame = 3
Query: 1815 EKGLTLKQFFHQFDQGGDGYLAYDEFKVMVTSLGIKLTGEQIRAVLRSIDLDGGGFIDFPEFEAALSRH----------EEVCGVAGSPWKMYVNPVHAVMTFHNV---ITDEEIWDYKAKDAD 2147
E+ + ++ F FD+ GDG ++ +E + SLG+ T +++ ++R +D+DG G IDF EF + ++R +E V +++PV N+ +TDEE+ + ++AD
Sbjct: 8 EQMVAFQEAFSLFDKNGDGCISLEELAAVTRSLGLDPTNQELNDMMREVDMDGNGTIDFQEFLSLIARKMQDGDGDEELKEAFEVLDKDRNGFISPVELRTVMINLGEKMTDEEV-EQMIREAD 130 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig85.20170.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig85.20170.1 >prot_S-ischiensis_contig85.20170.1 ID=prot_S-ischiensis_contig85.20170.1|Name=mRNA_S-ischiensis_contig85.20170.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=984bp MEEEERRIRKWWAVKLLHHVVSDEAYRYHSLERAMDSVAGAGFVVSQAELback to top mRNA from alignment at S-ischiensis_contig85:571723..576711+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig85.20170.1 ID=mRNA_S-ischiensis_contig85.20170.1|Name=mRNA_S-ischiensis_contig85.20170.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=4989bp|location=Sequence derived from alignment at S-ischiensis_contig85:571723..576711+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig85:571723..576711+ >mRNA_S-ischiensis_contig85.20170.1 ID=mRNA_S-ischiensis_contig85.20170.1|Name=mRNA_S-ischiensis_contig85.20170.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=5904bp|location=Sequence derived from alignment at S-ischiensis_contig85:571723..576711+ (Schizocladia ischiensis KU_0333)back to top |