mRNA_S-ischiensis_contig85.20167.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig85.20167.1
Unique NamemRNA_S-ischiensis_contig85.20167.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
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BLAST of mRNA_S-ischiensis_contig85.20167.1 vs. uniprot
Match: A0A836CJ98_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ98_9STRA)

HSP 1 Score: 474 bits (1219), Expect = 1.720e-167
Identity = 242/261 (92.72%), Postives = 255/261 (97.70%), Query Frame = 1 
Query:    1 LVLQLTKPEQREGALLELSKKREAFSDLAPILWHSFGTISALLQEIVAIYPLLSPPTLTPHASNRVCNALALLQCVASHPETRALFLNAHIPLYLYPFLNTVSKNRPFEYLRLTSLGVIGALVKMDDSDVINFLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLDEMGLNYICATAERFYAVSTVLSNMVSVLVESPSVRLLKHIVRCYLRLSDNVRAREALRQCLPDALRDSTFTNVLKDDQSVKRWLTQLLFNITD 783
            LV QLT PEQREGALLELSKKREAFSDLAPILWHSFGTISALLQEIVAIYP+LSPPTLTPHASNRVCNALALLQCVASHPETRA+FLNAHIPLYLYPFLNTVSK+RPFEYLRLTSLGVIGALVKMDDSDVI FLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLDE+GLNYICATAERFYAVSTVLSNMV+VLVE+PSVRLLKHIVRCYLRLSDN+RAREALRQCLPDALRD+TF + LKDD SVKRWL+QLL+NI++
Sbjct:   30 LVGQLTNPEQREGALLELSKKREAFSDLAPILWHSFGTISALLQEIVAIYPMLSPPTLTPHASNRVCNALALLQCVASHPETRAVFLNAHIPLYLYPFLNTVSKSRPFEYLRLTSLGVIGALVKMDDSDVITFLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLDELGLNYICATAERFYAVSTVLSNMVAVLVEAPSVRLLKHIVRCYLRLSDNLRAREALRQCLPDALRDATFASALKDDVSVKRWLSQLLYNISE 290
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BLAST of mRNA_S-ischiensis_contig85.20167.1 vs. uniprot
Match: A0A6H5JUJ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUJ5_9PHAE)

HSP 1 Score: 471 bits (1211), Expect = 1.380e-166
Identity = 239/261 (91.57%), Postives = 253/261 (96.93%), Query Frame = 1 
Query:    1 LVLQLTKPEQREGALLELSKKREAFSDLAPILWHSFGTISALLQEIVAIYPLLSPPTLTPHASNRVCNALALLQCVASHPETRALFLNAHIPLYLYPFLNTVSKNRPFEYLRLTSLGVIGALVKMDDSDVINFLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLDEMGLNYICATAERFYAVSTVLSNMVSVLVESPSVRLLKHIVRCYLRLSDNVRAREALRQCLPDALRDSTFTNVLKDDQSVKRWLTQLLFNITD 783
            LVLQLT P+QREGALLELSKKREAF+DLAPILWHS+GTISALLQE+VAIYPLLSPPTLTPHASNRVCNALALLQCVASHPETRALFL AHIPLYLYPFLNTVSKNRPFEYLRLTSLGVIGALVKMDD++VINFLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLDE GL YIC TAERFYAVSTVL NMV+VLVESPSVRLLKH+VRCYLRLSDN+RAREALRQCLPD+LR++TFTNVLKDD SVKRWLT LLFN+T+
Sbjct:   14 LVLQLTNPDQREGALLELSKKREAFTDLAPILWHSYGTISALLQEMVAIYPLLSPPTLTPHASNRVCNALALLQCVASHPETRALFLKAHIPLYLYPFLNTVSKNRPFEYLRLTSLGVIGALVKMDDAEVINFLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLDEHGLEYICQTAERFYAVSTVLGNMVAVLVESPSVRLLKHVVRCYLRLSDNLRAREALRQCLPDSLRNNTFTNVLKDDVSVKRWLTSLLFNLTE 274
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BLAST of mRNA_S-ischiensis_contig85.20167.1 vs. uniprot
Match: D7FW54_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW54_ECTSI)

HSP 1 Score: 472 bits (1214), Expect = 7.150e-166
Identity = 240/261 (91.95%), Postives = 253/261 (96.93%), Query Frame = 1 
Query:    1 LVLQLTKPEQREGALLELSKKREAFSDLAPILWHSFGTISALLQEIVAIYPLLSPPTLTPHASNRVCNALALLQCVASHPETRALFLNAHIPLYLYPFLNTVSKNRPFEYLRLTSLGVIGALVKMDDSDVINFLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLDEMGLNYICATAERFYAVSTVLSNMVSVLVESPSVRLLKHIVRCYLRLSDNVRAREALRQCLPDALRDSTFTNVLKDDQSVKRWLTQLLFNITD 783
            LVLQLT P+QREGALLELSKKREAF+DLAPILWHS+GTISALLQE+VAIYPLLSPPTLTPHASNRVCNALALLQCVASHPETRALFL AHIPLYLYPFLNTVSKNRPFEYLRLTSLGVIGALVKMDD++VINFLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLDE GL YIC TAERFYAVSTVL NMV+VLVESPSVRLLKH+VRCYLRLSDN+RAREALRQCLPDALR++TFTNVLKDD SVKRWLT LLFN+T+
Sbjct:   71 LVLQLTNPDQREGALLELSKKREAFTDLAPILWHSYGTISALLQEMVAIYPLLSPPTLTPHASNRVCNALALLQCVASHPETRALFLKAHIPLYLYPFLNTVSKNRPFEYLRLTSLGVIGALVKMDDAEVINFLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLDEHGLEYICQTAERFYAVSTVLGNMVAVLVESPSVRLLKHVVRCYLRLSDNLRAREALRQCLPDALRNNTFTNVLKDDVSVKRWLTSLLFNLTE 331
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BLAST of mRNA_S-ischiensis_contig85.20167.1 vs. uniprot
Match: A0A7S2V242_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V242_9STRA)

HSP 1 Score: 465 bits (1196), Expect = 7.050e-164
Identity = 240/267 (89.89%), Postives = 254/267 (95.13%), Query Frame = 1 
Query:    1 LVLQLTKPEQREGALLELSKKREAFSDLAPILWHSFGTISALLQEIVAIYPLLSPPTLTPHASNRVCNALALLQCVASHPETRALFLNAHIPLYLYPFLNTVSKNRPFEYLRLTSLGVIGALVKMDDSDVINFLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLDEMGLNYICATAERFYAVSTVLSNMVSVLVESPSVRLLKHIVRCYLRLSDNVRAREALRQCLPDALRDSTFTNVLKDDQSVKRWLTQLLFNITDTSTQQQ 801
            LV+QLT P+QRE ALLELSKKREAF+DLAPILWHSFGTISALLQEIVAIYPLLSPPTL+  ASNRVCNALALLQCVASH ETRALFLNAH+PLYLYPFLNTVSKNRPFEYLRLTSLGVIGALVKMDDSDVI+FLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLDEMGLNYICATAERFYAVSTVLSNMV+VL E+PSVRLLKHIVRCYLRLSDN+RAREALRQCLP+ LRDSTFT VLKDD +V+RWL QLLFNI + + QQQ
Sbjct:   25 LVVQLTDPDQRETALLELSKKREAFADLAPILWHSFGTISALLQEIVAIYPLLSPPTLSAQASNRVCNALALLQCVASHQETRALFLNAHVPLYLYPFLNTVSKNRPFEYLRLTSLGVIGALVKMDDSDVIHFLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLDEMGLNYICATAERFYAVSTVLSNMVAVLAEAPSVRLLKHIVRCYLRLSDNLRAREALRQCLPEGLRDSTFTGVLKDDVTVRRWLAQLLFNINEGAGQQQ 291
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BLAST of mRNA_S-ischiensis_contig85.20167.1 vs. uniprot
Match: A0A7S2S6Y0_9STRA (Hypothetical protein n=2 Tax=Dictyochophyceae TaxID=39119 RepID=A0A7S2S6Y0_9STRA)

HSP 1 Score: 457 bits (1176), Expect = 4.400e-161
Identity = 235/263 (89.35%), Postives = 250/263 (95.06%), Query Frame = 1 
Query:    1 LVLQLTKPEQREGALLELSKKREAFSDLAPILWHSFGTISALLQEIVAIYPLLSPPTLTPHASNRVCNALALLQCVASHPETRALFLNAHIPLYLYPFLNTVSKNRPFEYLRLTSLGVIGALVKMDDSDVINFLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLDEMGLNYICATAERFYAVSTVLSNMVSVLVESPSVRLLKHIVRCYLRLSDNVRAREALRQCLPDALRDSTFTNVLKDDQSVKRWLTQLLFNITDTS 789
            LVLQLT PEQRE ALLELSKKREAFSDLAPILWHSFGTISALLQEI++IYP+LSPP L   ASNRVCNALALLQCVASHPETR+LFL+AHIPLYLYPFLNTVSKNRPFEYLRLTSLGVIGALVKMDDS+VINFLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLDEMGLNYICATAERFYAVSTVLSNMV+VLVE PSVRLLKHIVRCYLRLSDN+RAREALRQCLPD+LRD+TF   L+DD +VKRWL+QLL NI++ S
Sbjct:   15 LVLQLTNPEQRESALLELSKKREAFSDLAPILWHSFGTISALLQEIMSIYPMLSPPNLPHGASNRVCNALALLQCVASHPETRSLFLSAHIPLYLYPFLNTVSKNRPFEYLRLTSLGVIGALVKMDDSEVINFLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLDEMGLNYICATAERFYAVSTVLSNMVAVLVEQPSVRLLKHIVRCYLRLSDNLRAREALRQCLPDSLRDATFNVALRDDVTVKRWLSQLLINISENS 277
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BLAST of mRNA_S-ischiensis_contig85.20167.1 vs. uniprot
Match: F0Y9A1_AURAN (Uncharacterized protein n=3 Tax=Pelagomonadales TaxID=54409 RepID=F0Y9A1_AURAN)

HSP 1 Score: 443 bits (1140), Expect = 1.850e-155
Identity = 224/264 (84.85%), Postives = 243/264 (92.05%), Query Frame = 1 
Query:    1 LVLQLT---KPEQREGALLELSKKREAFSDLAPILWHSFGTISALLQEIVAIYPLLSPPTLTPHASNRVCNALALLQCVASHPETRALFLNAHIPLYLYPFLNTVSKNRPFEYLRLTSLGVIGALVKMDDSDVINFLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLDEMGLNYICATAERFYAVSTVLSNMVSVLVESPSVRLLKHIVRCYLRLSDNVRAREALRQCLPDALRDSTFTNVLKDDQSVKRWLTQLLFNITD 783
            LVLQLT    PE RE ALLELSKKRE F+DLAPILWHSFGT+  LLQEIV+IYP+LSPP LT HASNRVCNALALLQCVASHPETR LFLNAH+PLYLYPFLNTVSKNRPFEYLRLTSLGV+GALVKMDDSDVINFLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLD+MGLNY+CATAERFYAVSTVL+NMV  LVE PS+RLLKHIVRCYLRLSDN+RAREALRQCLP++LRD TF   +KDD +VKRWL+ LL+NI++
Sbjct:   12 LVLQLTVPDSPEHRESALLELSKKRETFTDLAPILWHSFGTMGTLLQEIVSIYPMLSPPNLTAHASNRVCNALALLQCVASHPETRGLFLNAHVPLYLYPFLNTVSKNRPFEYLRLTSLGVVGALVKMDDSDVINFLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLDDMGLNYVCATAERFYAVSTVLANMVLTLVEQPSIRLLKHIVRCYLRLSDNLRAREALRQCLPESLRDHTFAGHIKDDLTVKRWLSSLLYNISE 275
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BLAST of mRNA_S-ischiensis_contig85.20167.1 vs. uniprot
Match: A0A8J5XC94_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XC94_DIALT)

HSP 1 Score: 442 bits (1136), Expect = 3.940e-155
Identity = 223/260 (85.77%), Postives = 243/260 (93.46%), Query Frame = 1 
Query:    1 LVLQLTKPEQREGALLELSKKREAFSDLAPILWHSFGTISALLQEIVAIYPLLSPPTLTPHASNRVCNALALLQCVASHPETRALFLNAHIPLYLYPFLNTVSKNRPFEYLRLTSLGVIGALVKMDDSDVINFLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLDEMGLNYICATAERFYAVSTVLSNMVSVLVESPSVRLLKHIVRCYLRLSDNVRAREALRQCLPDALRDSTFTNVLKDDQSVKRWLTQLLFNIT 780
            LV  LT PEQREGALLELSK+REAF+DLAPILWHSFGTI+ALLQEIVAIYPLLSPP+LT HASNRVCNALALLQCVASHPETR LFLNAHIPL+LYPFLNTVSK RPFEYLRLTSLGVIGALVK+DD++VI+FLL TEIIPLCLRIMETGSELSKTVATFIVQKILLD+MGL+YICA AERFYAVSTVL+NM+ VL E PS RLLKHIVRCYLRLS+N RAREALRQCLPD+LRD+TF+  LKDD S KRWL+QLL+N+T
Sbjct:   12 LVADLTSPEQREGALLELSKRREAFADLAPILWHSFGTIAALLQEIVAIYPLLSPPSLTAHASNRVCNALALLQCVASHPETRTLFLNAHIPLFLYPFLNTVSKTRPFEYLRLTSLGVIGALVKVDDAEVISFLLSTEIIPLCLRIMETGSELSKTVATFIVQKILLDDMGLSYICAIAERFYAVSTVLANMMQVLAEQPSARLLKHIVRCYLRLSENPRAREALRQCLPDSLRDATFSTALKDDVSTKRWLSQLLYNLT 271
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BLAST of mRNA_S-ischiensis_contig85.20167.1 vs. uniprot
Match: A0A7S3AUU1_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AUU1_9EUKA)

HSP 1 Score: 441 bits (1135), Expect = 9.940e-155
Identity = 226/261 (86.59%), Postives = 238/261 (91.19%), Query Frame = 1 
Query:    1 LVLQLTKPEQREGALLELSKKREAFSDLAPILWHSFGTISALLQEIVAIYPLLSPPTLTPHASNRVCNALALLQCVASHPETRALFLNAHIPLYLYPFLNTVSKNRPFEYLRLTSLGVIGALVKMDDSDVINFLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLDEMGLNYICATAERFYAVSTVLSNMVSVLVESPSVRLLKHIVRCYLRLSDNVRAREALRQCLPDALRDSTFTNVLKDDQSVKRWLTQLLFNITD 783
            LVL+LT P+QRE ALLELSK+RE F+DLAPILWHSFGT+SALLQEIVAIYPLL+PP+LT  ASNRVCNALALLQCVASHPETR LFLNAHIPL+LYPFLNTVSK RPFEYLRLTSLGVIGALVK+DD+DVINFLL TEIIPLCLRIMETGSELSKTVATFIVQKILLDE GL YICATAERFYAVSTVL N+V  LVE PS RLLKHIVRCYLRLSDN RAREALRQCLPDALRD+TF   LKDD   KRWLTQLLFNI D
Sbjct:   29 LVLELTNPDQRESALLELSKRRETFADLAPILWHSFGTVSALLQEIVAIYPLLAPPSLTAQASNRVCNALALLQCVASHPETRTLFLNAHIPLFLYPFLNTVSKTRPFEYLRLTSLGVIGALVKVDDADVINFLLSTEIIPLCLRIMETGSELSKTVATFIVQKILLDETGLAYICATAERFYAVSTVLGNLVGSLVEQPSARLLKHIVRCYLRLSDNPRAREALRQCLPDALRDATFQGCLKDDVITKRWLTQLLFNIND 289
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BLAST of mRNA_S-ischiensis_contig85.20167.1 vs. uniprot
Match: R1C1A7_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1C1A7_EMIHU)

HSP 1 Score: 441 bits (1134), Expect = 1.180e-154
Identity = 226/263 (85.93%), Postives = 240/263 (91.25%), Query Frame = 1 
Query:    1 LVLQLTKPEQREGALLELSKKREAFSDLAPILWHSFGTISALLQEIVAIYPLLSPPTLTPHASNRVCNALALLQCVASHPETRALFLNAHIPLYLYPFLNTVSKNRPFEYLRLTSLGVIGALVKMDDSDVINFLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLDEMGLNYICATAERFYAVSTVLSNMVSVLVESPSVRLLKHIVRCYLRLSDNVRAREALRQCLPDALRDSTFTNVLKDDQSVKRWLTQLLFNITDTS 789
            LVL+LT PEQRE ALLELSK+RE F DLAPILWHSFGTISALLQEIVAIYPLLSPP+LT  ASNRVCNALALLQCVASHPETR LFLNAHIPL+LYPFLNT+SK RPFEYLRLTSLGVIGALVK+DD DVINFLL TEIIPLCLRIMETGSELSKTVATFIVQKILLDE GL YICATAERFYAVSTVL N+V  LV+ PS RLLKHIVRCYLRLSDN RAREALRQCLPD LRD+TF+  LKDD + KRWLTQLLFNIT+++
Sbjct:   23 LVLELTNPEQREAALLELSKRRETFIDLAPILWHSFGTISALLQEIVAIYPLLSPPSLTAQASNRVCNALALLQCVASHPETRTLFLNAHIPLFLYPFLNTISKTRPFEYLRLTSLGVIGALVKVDDPDVINFLLSTEIIPLCLRIMETGSELSKTVATFIVQKILLDETGLAYICATAERFYAVSTVLGNLVGSLVDQPSARLLKHIVRCYLRLSDNPRAREALRQCLPDVLRDATFSACLKDDVTTKRWLTQLLFNITEST 285
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BLAST of mRNA_S-ischiensis_contig85.20167.1 vs. uniprot
Match: A0A7S0DZ44_9EUKA (Hypothetical protein n=3 Tax=Prymnesiophyceae TaxID=2608131 RepID=A0A7S0DZ44_9EUKA)

HSP 1 Score: 439 bits (1130), Expect = 8.810e-154
Identity = 225/263 (85.55%), Postives = 240/263 (91.25%), Query Frame = 1 
Query:    1 LVLQLTKPEQREGALLELSKKREAFSDLAPILWHSFGTISALLQEIVAIYPLLSPPTLTPHASNRVCNALALLQCVASHPETRALFLNAHIPLYLYPFLNTVSKNRPFEYLRLTSLGVIGALVKMDDSDVINFLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLDEMGLNYICATAERFYAVSTVLSNMVSVLVESPSVRLLKHIVRCYLRLSDNVRAREALRQCLPDALRDSTFTNVLKDDQSVKRWLTQLLFNITDTS 789
            LV +LT PEQRE ALLELSK+RE F DLAPILWHSFGTISALLQEIVAIYPLLSPP+LT  ASNRVCNALALLQCVASHPETR LFLNAHIPL+LYPFLNTVSK RPFEYLRLTSLGVIGALVK+DD+DVINFLL TEIIPLCLRIMETGSELSKTVATFIVQKILLDE GL YICATAERFYAVSTVL N+V  LVE PS RLLKHIVRCYLRLSDN RAREALRQCLP+ LRD+TF+  LKDD + KRWLTQLLFNI++++
Sbjct:   40 LVAELTNPEQRESALLELSKRRETFVDLAPILWHSFGTISALLQEIVAIYPLLSPPSLTAQASNRVCNALALLQCVASHPETRTLFLNAHIPLFLYPFLNTVSKTRPFEYLRLTSLGVIGALVKVDDADVINFLLSTEIIPLCLRIMETGSELSKTVATFIVQKILLDETGLAYICATAERFYAVSTVLGNLVGTLVEQPSARLLKHIVRCYLRLSDNPRAREALRQCLPEPLRDATFSGCLKDDVTTKRWLTQLLFNISESA 302
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig85.20167.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CJ98_9STRA1.720e-16792.72Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5JUJ5_9PHAE1.380e-16691.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FW54_ECTSI7.150e-16691.95Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2V242_9STRA7.050e-16489.89Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2S6Y0_9STRA4.400e-16189.35Hypothetical protein n=2 Tax=Dictyochophyceae TaxI... [more]
F0Y9A1_AURAN1.850e-15584.85Uncharacterized protein n=3 Tax=Pelagomonadales Ta... [more]
A0A8J5XC94_DIALT3.940e-15585.77Uncharacterized protein n=2 Tax=Diacronema lutheri... [more]
A0A7S3AUU1_9EUKA9.940e-15586.59Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
R1C1A7_EMIHU1.180e-15485.93Hypothetical protein n=1 Tax=Emiliania huxleyi Tax... [more]
A0A7S0DZ44_9EUKA8.810e-15485.55Hypothetical protein n=3 Tax=Prymnesiophyceae TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig85contigS-ischiensis_contig85:560175..560981 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score473.0
Seed ortholog evalue9.2e-131
Seed eggNOG ortholog2880.D7FW54
Preferred nameRQCD1
KEGG koko:K12606,ko:K13754
KEGG TC2.A.19.4.4
KEGG Pathwayko03018,map03018
GOsGO:0000003,GO:0000075,GO:0000077,GO:0000278,GO:0000288,GO:0000289,GO:0000932,GO:0000956,GO:0001932,GO:0001934,GO:0003006,GO:0003674,GO:0003676,GO:0003723,GO:0005102,GO:0005154,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006139,GO:0006355,GO:0006357,GO:0006401,GO:0006402,GO:0006417,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006977,GO:0007044,GO:0007049,GO:0007093,GO:0007154,GO:0007165,GO:0007166,GO:0007276,GO:0007283,GO:0007346,GO:0007548,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0010033,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010562,GO:0010564,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0010646,GO:0010647,GO:0010648,GO:0010948,GO:0016043,GO:0016070,GO:0016071,GO:0017148,GO:0019219,GO:0019220,GO:0019221,GO:0019222,GO:0019439,GO:0019899,GO:0019900,GO:0019904,GO:0019953,GO:0022402,GO:0022414,GO:0022607,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030014,GO:0030015,GO:0030330,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031399,GO:0031401,GO:0031570,GO:0031571,GO:0031581,GO:0032268,GO:0032269,GO:0032270,GO:0032501,GO:0032502,GO:0032504,GO:0032784,GO:0032786,GO:0032968,GO:0032991,GO:0033135,GO:0033138,GO:0033143,GO:0033144,GO:0033146,GO:0033147,GO:0033554,GO:0034097,GO:0034243,GO:0034248,GO:0034249,GO:0034329,GO:0034330,GO:0034641,GO:0034655,GO:0035556,GO:0035770,GO:0036464,GO:0042058,GO:0042221,GO:0042325,GO:0042327,GO:0042770,GO:0042802,GO:0042803,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0044703,GO:0044773,GO:0044774,GO:0044783,GO:0044819,GO:0045742,GO:0045786,GO:0045787,GO:0045893,GO:0045930,GO:0045935,GO:0045937,GO:0045944,GO:0046483,GO:0046700,GO:0046983,GO:0048232,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0048609,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0051254,GO:0051704,GO:0051716,GO:0051726,GO:0060255,GO:0065007,GO:0065009,GO:0070851,GO:0070887,GO:0071156,GO:0071158,GO:0071310,GO:0071345,GO:0071704,GO:0071840,GO:0072331,GO:0072395,GO:0072401,GO:0072413,GO:0072422,GO:0072431,GO:0080090,GO:0090068,GO:0090304,GO:0097159,GO:1901184,GO:1901186,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902400,GO:1902402,GO:1902403,GO:1902680,GO:1902806,GO:1902807,GO:1903047,GO:1903506,GO:1903508,GO:1990904,GO:2000045,GO:2000112,GO:2000113,GO:2000134,GO:2000325,GO:2000327,GO:2001141
EggNOG free text desc.positive regulation of nuclear receptor transcription coactivator activity
EggNOG OGsCOG5209@1,KOG3036@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02000,ko03019
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionArmadillo-like helical
Ec32 orthologEc-01_003420.1
Exons1
Model size807
Cds size807
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817344.2424002-CDS-S-ischiensis_contig85:560174..5609811622817344.2424002-CDS-S-ischiensis_contig85:560174..560981Schizocladia ischiensis KU_0333CDSS-ischiensis_contig85 560175..560981 -
1695741043.2744656-CDS-S-ischiensis_contig85:560174..5609811695741043.2744656-CDS-S-ischiensis_contig85:560174..560981Schizocladia ischiensis KU_0333CDSS-ischiensis_contig85 560175..560981 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig85.20167.1prot_S-ischiensis_contig85.20167.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig85 560175..560981 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig85.20167.1

>prot_S-ischiensis_contig85.20167.1 ID=prot_S-ischiensis_contig85.20167.1|Name=mRNA_S-ischiensis_contig85.20167.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=269bp
LVLQLTKPEQREGALLELSKKREAFSDLAPILWHSFGTISALLQEIVAIY
PLLSPPTLTPHASNRVCNALALLQCVASHPETRALFLNAHIPLYLYPFLN
TVSKNRPFEYLRLTSLGVIGALVKMDDSDVINFLLQTEIIPLCLRIMETG
SELSKTVATFIVQKILLDEMGLNYICATAERFYAVSTVLSNMVSVLVESP
SVRLLKHIVRCYLRLSDNVRAREALRQCLPDALRDSTFTNVLKDDQSVKR
WLTQLLFNITDTSTQQQT*
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mRNA from alignment at S-ischiensis_contig85:560175..560981-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig85.20167.1 ID=mRNA_S-ischiensis_contig85.20167.1|Name=mRNA_S-ischiensis_contig85.20167.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=807bp|location=Sequence derived from alignment at S-ischiensis_contig85:560175..560981- (Schizocladia ischiensis KU_0333)
TTGGTTCTTCAGCTGACCAAGCCGGAACAGCGCGAAGGGGCCTTGTTAGA
GCTTAGCAAGAAGCGAGAGGCATTCTCGGATTTAGCGCCCATCCTGTGGC
ACTCGTTTGGGACCATCTCGGCCCTGCTGCAGGAGATCGTGGCGATATAC
CCGCTGCTGTCCCCCCCGACGCTGACGCCGCATGCGAGCAACCGTGTGTG
CAACGCGCTGGCGCTGCTGCAGTGCGTGGCGTCGCACCCCGAGACGCGCG
CGCTCTTCTTGAACGCGCACATCCCGCTGTACCTGTACCCGTTCCTCAAC
ACGGTCAGCAAGAACAGGCCGTTTGAGTACCTGCGGCTTACGAGCCTGGG
CGTCATCGGGGCCCTGGTCAAGATGGACGACTCGGACGTGATCAATTTCC
TCCTCCAGACAGAGATAATACCCCTGTGCCTGCGCATAATGGAGACGGGG
AGCGAGCTGTCAAAGACAGTGGCCACCTTCATCGTGCAGAAGATCCTGCT
GGACGAAATGGGGCTCAACTACATCTGCGCCACGGCGGAGCGCTTCTACG
CAGTGAGCACGGTGCTGAGCAACATGGTGTCTGTGCTGGTAGAGAGCCCG
TCTGTGCGGTTACTCAAGCATATCGTGCGGTGCTACCTCCGGCTGTCGGA
CAATGTCCGCGCCCGTGAGGCCCTGCGTCAATGTCTGCCTGATGCCTTGC
GCGACAGCACCTTCACCAACGTGCTCAAGGACGACCAGTCCGTCAAGCGC
TGGCTGACGCAGCTGTTGTTCAATATCACAGATACTAGTACACAGCAGCA
GACATGA
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Coding sequence (CDS) from alignment at S-ischiensis_contig85:560175..560981-

>mRNA_S-ischiensis_contig85.20167.1 ID=mRNA_S-ischiensis_contig85.20167.1|Name=mRNA_S-ischiensis_contig85.20167.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1614bp|location=Sequence derived from alignment at S-ischiensis_contig85:560175..560981- (Schizocladia ischiensis KU_0333)
TTGGTTCTTCAGCTGACCAAGCCGGAACAGCGCGAAGGGGCCTTGTTAGA
GCTTAGCAAGAAGCGAGAGGCATTCTCGGATTTAGCGCCCATCCTGTGGC
ACTCGTTTGGGACCATCTCGGCCCTGCTGCAGGAGATCGTGGCGATATAC
CCGCTGCTGTCCCCCCCGACGCTGACGCCGCATGCGAGCAACCGTGTGTG
CAACGCGCTGGCGCTGCTGCAGTGCGTGGCGTCGCACCCCGAGACGCGCG
CGCTCTTCTTGAACGCGCACATCCCGCTGTACCTGTACCCGTTCCTCAAC
ACGGTCAGCAAGAACAGGCCGTTTGAGTACCTGCGGCTTACGAGCCTGGG
CGTCATCGGGGCCCTGGTCAAGATGGACGACTCGGACGTGATCAATTTCC
TCCTCCAGACAGAGATAATACCCCTGTGCCTGCGCATAATGGAGACGGGG
AGCGAGCTGTCAAAGACAGTGGCCACCTTCATCGTGCAGAAGATCCTGCT
GGACGAAATGGGGCTCAACTACATCTGCGCCACGGCGGAGCGCTTCTACG
CAGTGAGCACGGTGCTGAGCAACATGGTGTCTGTGCTGGTAGAGAGCCCG
TCTGTGCGGTTACTCAAGCATATCGTGCGGTGCTACCTCCGGCTGTCGGA
CAATGTCCGCGCCCGTGAGGCCCTGCGTCAATGTCTGCCTGATGCCTTGC
GCGACAGCACCTTCACCAACGTGCTCAAGGACGACCAGTCCGTCAAGCGC
TGGCTGACGCAGCTGTTGTTCAATATCACAGATACTAGTACACAGCAGCA
GACATGATTGGTTCTTCAGCTGACCAAGCCGGAACAGCGCGAAGGGGCCT
TGTTAGAGCTTAGCAAGAAGCGAGAGGCATTCTCGGATTTAGCGCCCATC
CTGTGGCACTCGTTTGGGACCATCTCGGCCCTGCTGCAGGAGATCGTGGC
GATATACCCGCTGCTGTCCCCCCCGACGCTGACGCCGCATGCGAGCAACC
GTGTGTGCAACGCGCTGGCGCTGCTGCAGTGCGTGGCGTCGCACCCCGAG
ACGCGCGCGCTCTTCTTGAACGCGCACATCCCGCTGTACCTGTACCCGTT
CCTCAACACGGTCAGCAAGAACAGGCCGTTTGAGTACCTGCGGCTTACGA
GCCTGGGCGTCATCGGGGCCCTGGTCAAGATGGACGACTCGGACGTGATC
AATTTCCTCCTCCAGACAGAGATAATACCCCTGTGCCTGCGCATAATGGA
GACGGGGAGCGAGCTGTCAAAGACAGTGGCCACCTTCATCGTGCAGAAGA
TCCTGCTGGACGAAATGGGGCTCAACTACATCTGCGCCACGGCGGAGCGC
TTCTACGCAGTGAGCACGGTGCTGAGCAACATGGTGTCTGTGCTGGTAGA
GAGCCCGTCTGTGCGGTTACTCAAGCATATCGTGCGGTGCTACCTCCGGC
TGTCGGACAATGTCCGCGCCCGTGAGGCCCTGCGTCAATGTCTGCCTGAT
GCCTTGCGCGACAGCACCTTCACCAACGTGCTCAAGGACGACCAGTCCGT
CAAGCGCTGGCTGACGCAGCTGTTGTTCAATATCACAGATACTAGTACAC
AGCAGCAGACATGA
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