mRNA_S-ischiensis_contig85.20161.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig85.20161.1
Unique NamemRNA_S-ischiensis_contig85.20161.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
BLAST of mRNA_S-ischiensis_contig85.20161.1 vs. uniprot
Match: A0A2P6VKT9_9CHLO (O-acetyl-ADP-ribose deacetylase MACROD2 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VKT9_9CHLO)

HSP 1 Score: 218 bits (555), Expect = 1.650e-63
Identity = 108/167 (64.67%), Postives = 126/167 (75.45%), Query Frame = 1
Query:  442 LAISKGDLTKWEGDAIVNAANERMLDGGGVDGAIHRAAGRELLSACLEEPEVEEGVRCPTGQARITPGFRLPAKHVIHTVGPVYDSPEESAPLLRSAYQASLTLARDKKLRRIAFPAISCGIFGYPLKEAAEIAVMACKDHVGDLEMVEFLMFDNKAYWAWVNTAQE 942
            LAI +GDLTK++G AIVNAANERML GGGVDGAIHRAAG  LL AC + PEV  GVRCP G+AR+TPG  LPA+HVIHTVGPVY SP  SAPLL  AY +SL LA + KL R+AFPAISCG+FGYPL E+AEIAV   +   G L+ + F +F  K   AW+  A+E
Sbjct:   15 LAIRRGDLTKFDGCAIVNAANERMLGGGGVDGAIHRAAGPALLEACKQVPEVRRGVRCPRGEARVTPGGDLPARHVIHTVGPVYSSPATSAPLLEGAYASSLRLANEHKLERVAFPAISCGVFGYPLDESAEIAVRTSQREAGSLQEIHFFLFGQKELDAWLAAARE 181          
BLAST of mRNA_S-ischiensis_contig85.20161.1 vs. uniprot
Match: A0A7N0RIW2_KALFE (Macro domain-containing protein n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0RIW2_KALFE)

HSP 1 Score: 218 bits (555), Expect = 8.750e-63
Identity = 125/247 (50.61%), Postives = 159/247 (64.37%), Query Frame = 1
Query:  229 GVSRAGSYWAALLALGPSHRLLSVGSGPIMAPGR---GSKRLPVEARGARKMSRDADDHSNVRREFQLNADGALLAISKGDLTKW----EGDAIVNAANERMLDGGGVDGAIHRAAGRELLSACLEEPEVEEGVRCPTGQARITPGFRLPAKHVIHTVGPVYDSPEESAPLLRSAYQASLTLARDKKLRRIAFPAISCGIFGYPLKEAAEIAVMACKDHVGDLEMVEFLMFDNKAYWAWVNTAQEML 948
            GVSR+ ++ +  L+ GP+ RLL     P   P +    S  + V +RGA  MS D +    +  EF L+   AL  I KGD+TKW      DAIVN ANERML GGG DGAIHRAAG EL  AC + PEV  GVRCPTG+ARITPGF+LPA HVIHTVGPVYD   +    LR+AY  SL +A++  +  IAFPAISCG++ YP  EAA +A+ + KD  GD + V F++F ++ Y AW+  A E+L
Sbjct:    8 GVSRS-AFVSGFLS-GPNPRLLPKFFAPRRLPSQPASSSVTISVISRGASTMSMDGNGSRQLV-EFTLSPTSALK-IQKGDITKWFVDGSSDAIVNPANERMLGGGGADGAIHRAAGPELRDACYKVPEVRRGVRCPTGEARITPGFKLPASHVIHTVGPVYDEDPDPETSLRNAYTNSLRVAKENNINYIAFPAISCGVYRYPYDEAAAVAISSIKDFNGDFKEVHFVLFSDEIYNAWLKKASELL 250          
BLAST of mRNA_S-ischiensis_contig85.20161.1 vs. uniprot
Match: E1ZEJ1_CHLVA (Macro domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZEJ1_CHLVA)

HSP 1 Score: 216 bits (549), Expect = 1.020e-62
Identity = 106/168 (63.10%), Postives = 126/168 (75.00%), Query Frame = 1
Query:  439 LLAISKGDLTKWEGDAIVNAANERMLDGGGVDGAIHRAAGRELLSACLEEPEVEEGVRCPTGQARITPGFRLPAKHVIHTVGPVYDSPEESAPLLRSAYQASLTLARDKKLRRIAFPAISCGIFGYPLKEAAEIAVMACKDHVGDLEMVEFLMFDNKAYWAWVNTAQE 942
            LL + +GDLTK+ GDAIVNAANERML GGGVDGAIHRAAG  LL AC + PEV +GVRCPTG+AR+T G  LPA++VIHTVGPVY + E SAPLL SAY++SL LA    L+ +AFPAISCGIFGYP  EAAEIAV  C+   G L+ + F +F      AW+  A+E
Sbjct:   15 LLVLRRGDLTKFAGDAIVNAANERMLGGGGVDGAIHRAAGPSLLEACRQVPEVRQGVRCPTGEARMTTGAGLPARNVIHTVGPVYHNAEASAPLLESAYRSSLQLANQHGLKTVAFPAISCGIFGYPFDEAAEIAVRTCQQEAGQLQEIHFFLFGQPILDAWLQAAEE 182          
BLAST of mRNA_S-ischiensis_contig85.20161.1 vs. uniprot
Match: A0A1R3J5B3_9ROSI (Appr-1-p processing n=1 Tax=Corchorus olitorius TaxID=93759 RepID=A0A1R3J5B3_9ROSI)

HSP 1 Score: 214 bits (546), Expect = 2.790e-62
Identity = 99/175 (56.57%), Postives = 134/175 (76.57%), Query Frame = 1
Query:  436 ALLAISKGDLTKW----EGDAIVNAANERMLDGGGVDGAIHRAAGRELLSACLEEPEVEEGVRCPTGQARITPGFRLPAKHVIHTVGPVYDSPEESAPLLRSAYQASLTLARDKKLRRIAFPAISCGIFGYPLKEAAEIAVMACKDHVGDLEMVEFLMFDNKAYWAWVNTAQEML 948
            +LL I+KGD+TKW      DAIVN AN++ML GGG DGAIHRAAG EL  AC E PEV+ G+RCPTG+ARITPGF+LPA HVIHTVGP+YD  ++    LR+AY+ SLT+A++  ++ IAFPAISCG++GYP +EAA +A+   K+   D++ V F++F+++ Y  W+N A+E+L
Sbjct:   18 SLLKINKGDITKWFVDGSSDAIVNPANQKMLGGGGADGAIHRAAGPELRDACYEVPEVQPGIRCPTGEARITPGFKLPASHVIHTVGPIYDYDKDPKASLRNAYKNSLTVAKENNIQYIAFPAISCGVYGYPFEEAATVAISTVKEFANDIKEVHFVLFEDEIYNIWLNKAKELL 192          
BLAST of mRNA_S-ischiensis_contig85.20161.1 vs. uniprot
Match: A0A250XK20_9CHLO (Macro domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XK20_9CHLO)

HSP 1 Score: 216 bits (549), Expect = 4.620e-62
Identity = 105/178 (58.99%), Postives = 136/178 (76.40%), Query Frame = 1
Query:  415 FQLNADGALLAISKGDLTKWEGDAIVNAANERMLDGGGVDGAIHRAAGRELLSACLEEPEVEEGVRCPTGQARITPGFRLPAKHVIHTVGPVYDSPEESAPLLRSAYQASLTLARDKKLRRIAFPAISCGIFGYPLKEAAEIAVMACKDHVGDLEMVEFLMFDNKAYWAWVNTAQEML 948
            F  N   + L + +GDLT+++GDAIVNAANERML GGGVDGAIHRAAGREL   CL+ PEVEEGVRCPTGQARIT G++LPAK+VIHTVGP+Y+S  ESAPLL +AY++SL LA +  L+ +AFPAIS G+FGYP  +AAE+++ A  D +G++  V F++F +    A+   A  +L
Sbjct:   42 FPNNHHESTLVLVQGDLTEFQGDAIVNAANERMLGGGGVDGAIHRAAGRELYEECLKVPEVEEGVRCPTGQARITKGYKLPAKYVIHTVGPIYESDAESAPLLANAYKSSLQLANEHNLKTVAFPAISTGVFGYPKYKAAEVSLKAVADAIGEVREVHFILFGSDMLAAYQKAANSLL 219          
BLAST of mRNA_S-ischiensis_contig85.20161.1 vs. uniprot
Match: A0A8B8PZY6_9MYRT (uncharacterized protein LOC115748117 n=1 Tax=Rhodamnia argentea TaxID=178133 RepID=A0A8B8PZY6_9MYRT)

HSP 1 Score: 213 bits (543), Expect = 3.140e-61
Identity = 110/204 (53.92%), Postives = 139/204 (68.14%), Query Frame = 1
Query:  349 VEARGARKMSRDADDHSNVRREFQLNADGALLAISKGDLTKWE----GDAIVNAANERMLDGGGVDGAIHRAAGRELLSACLEEPEVEEGVRCPTGQARITPGFRLPAKHVIHTVGPVYDSPEESAPLLRSAYQASLTLARDKKLRRIAFPAISCGIFGYPLKEAAEIAVMACKDHVGDLEMVEFLMFDNKAYWAWVNTAQEML 948
              A+ AR  S+ AD  +     F L+   A L I KGD+T+W      DAIVN ANERML GGG DGAIHRAAG ELL AC + PEV  G+RCPTG+ARITPGFR+PA HVIH VGP+YD    S   LR+AY+ SL +A++K+L+ +AFPAISCG+FGYP  EAA IA+   K+    L+ V F++F +  Y  WV+ A+E+L
Sbjct:   34 TRAKFARMSSQGADAEAQKLISFSLSP-AAALVIQKGDITEWSVDGSSDAIVNPANERMLGGGGADGAIHRAAGPELLEACYKVPEVLPGIRCPTGEARITPGFRVPASHVIHAVGPIYDGGSNSQASLRNAYRNSLMVAKEKELQYVAFPAISCGVFGYPYDEAATIAISTIKESSDGLKEVHFVLFSDDIYNVWVSKAKELL 236          
BLAST of mRNA_S-ischiensis_contig85.20161.1 vs. uniprot
Match: UPI001CB9B184 (macro domain-containing protein VPA0103 isoform X1 n=2 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB9B184)

HSP 1 Score: 213 bits (541), Expect = 5.580e-61
Identity = 104/194 (53.61%), Postives = 134/194 (69.07%), Query Frame = 1
Query:  379 RDADDHSNVRREFQLNADGALLAISKGDLTKW----EGDAIVNAANERMLDGGGVDGAIHRAAGRELLSACLEEPEVEEGVRCPTGQARITPGFRLPAKHVIHTVGPVYDSPEESAPLLRSAYQASLTLARDKKLRRIAFPAISCGIFGYPLKEAAEIAVMACKDHVGDLEMVEFLMFDNKAYWAWVNTAQEML 948
            R A + SN        +  + L I KGD+T+W      DAIVN ANERML GGG DGAIHRAAG EL +AC + PEV  GVRCPTG+ARITPGF+LPA HVIHTVGPVYD+    A  L +AY+ SL +A++  ++ +AFPAISCG+FGYP  EAA +A+   K+H  D++ V F++F++  Y  WV  A+E+L
Sbjct:   40 RAASNMSNSHAAHFTLSPTSTLKIQKGDITRWFVNGSSDAIVNPANERMLGGGGADGAIHRAAGPELRTACYDVPEVRPGVRCPTGEARITPGFKLPASHVIHTVGPVYDADSNVAVFLSNAYRNSLRVAKEHNIQYVAFPAISCGVFGYPFDEAATVAISTIKEHCSDIKEVHFVLFEDNIYNVWVKKAEELL 233          
BLAST of mRNA_S-ischiensis_contig85.20161.1 vs. uniprot
Match: UPI0005FB6297 (macro domain-containing protein VPA0103 isoform X1 n=2 Tax=Jatropha curcas TaxID=180498 RepID=UPI0005FB6297)

HSP 1 Score: 213 bits (541), Expect = 2.190e-60
Identity = 102/184 (55.43%), Postives = 137/184 (74.46%), Query Frame = 1
Query:  415 FQLNADGALLAISKGDLTKW----EGDAIVNAANERMLDGGGVDGAIHRAAGRELLSACLEEPEVEEGVRCPTGQARITPGFRLPAKHVIHTVGPVYDSPEESAPLLRSAYQASLTLARDKKLRRIAFPAISCGIFGYPLKEAAEIAVMACKDHVGDLEMVEFLMFDNKAYWAWVNTAQEMLPP 954
            F L++  ++L I+KGD+TKW      DAIVN ANERML GGG DGAIHRAAG ELL AC + PEV+ G+RCPTG+ARITPGF+LPA HVI+TVGP+YD+    A  L++AY+ SLT+A+D  ++ IAFPAISCG++GYP +EAA +++   K+   DL+ V F++F +  Y  W+  A+E+L P
Sbjct:   97 FPLSS-SSVLKINKGDITKWFVDGSSDAIVNPANERMLGGGGADGAIHRAAGPELLDACYKVPEVQPGIRCPTGEARITPGFKLPASHVIYTVGPIYDTDSNPAASLKNAYRNSLTVAKDNNIKYIAFPAISCGVYGYPYEEAAAVSISTIKEFKDDLKEVHFVLFSDDIYNVWLKKAKELLLP 279          
BLAST of mRNA_S-ischiensis_contig85.20161.1 vs. uniprot
Match: A0A5C7GZP7_9ROSI (Macro domain-containing protein n=1 Tax=Acer yangbiense TaxID=1000413 RepID=A0A5C7GZP7_9ROSI)

HSP 1 Score: 209 bits (533), Expect = 2.740e-60
Identity = 102/182 (56.04%), Postives = 133/182 (73.08%), Query Frame = 1
Query:  415 FQLNADGALLAISKGDLTKW----EGDAIVNAANERMLDGGGVDGAIHRAAGRELLSACLEEPEVEEGVRCPTGQARITPGFRLPAKHVIHTVGPVYDSPEESAPLLRSAYQASLTLARDKKLRRIAFPAISCGIFGYPLKEAAEIAVMACKDHVGDLEMVEFLMFDNKAYWAWVNTAQEML 948
            F+L+ D  LL IS+GD+++W      DAIVN ANERML GGG DGAIHRAAG +L  AC + PEV  GVRCPTG+ARITPGF+LPA HVIHTVGP+YD     A LLRS+Y+ SL++A++  ++ IAFPAISCG+FGYP +EAA +A+   K+   D + V F++F +  Y  W+  A+E+L
Sbjct:   17 FKLS-DCCLLKISEGDISQWFINGSSDAIVNPANERMLGGGGADGAIHRAAGPQLREACYKVPEVRSGVRCPTGEARITPGFKLPASHVIHTVGPIYDVHSNPAALLRSSYKNSLSVAKENNIQYIAFPAISCGVFGYPFEEAATVAISTIKEFANDFKEVHFVLFADDIYSVWLKKAKELL 197          
BLAST of mRNA_S-ischiensis_contig85.20161.1 vs. uniprot
Match: UPI0011D2ACB0 (uncharacterized protein LOC115663435 n=1 Tax=Syzygium oleosum TaxID=219896 RepID=UPI0011D2ACB0)

HSP 1 Score: 211 bits (538), Expect = 3.430e-60
Identity = 105/182 (57.69%), Postives = 132/182 (72.53%), Query Frame = 1
Query:  415 FQLNADGALLAISKGDLTKWE----GDAIVNAANERMLDGGGVDGAIHRAAGRELLSACLEEPEVEEGVRCPTGQARITPGFRLPAKHVIHTVGPVYDSPEESAPLLRSAYQASLTLARDKKLRRIAFPAISCGIFGYPLKEAAEIAVMACKDHVGDLEMVEFLMFDNKAYWAWVNTAQEML 948
            F L+   AL+ I KGD+TKW      DAIVN ANERML GGG DGAIHRAAG ELL AC + PEV  G+RCPTG+ARIT GFRLPA HVIHTVGP+YD+       LR+AY+ SL +A++KKL+ +AFPAISCG++GYP  EAA IA+   K+    L+ V F++F +  Y AW++ A+E+L
Sbjct:   79 FSLSPTSALV-IQKGDITKWSVDGSSDAIVNPANERMLGGGGADGAIHRAAGPELLEACYKVPEVRPGIRCPTGEARITAGFRLPASHVIHTVGPIYDADSNPQASLRNAYRNSLMVAKEKKLQHVAFPAISCGVYGYPYDEAATIAISTLKESSDGLKEVHFVLFSDDIYNAWLSKAKELL 259          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig85.20161.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2P6VKT9_9CHLO1.650e-6364.67O-acetyl-ADP-ribose deacetylase MACROD2 n=1 Tax=Mi... [more]
A0A7N0RIW2_KALFE8.750e-6350.61Macro domain-containing protein n=1 Tax=Kalanchoe ... [more]
E1ZEJ1_CHLVA1.020e-6263.10Macro domain-containing protein n=1 Tax=Chlorella ... [more]
A0A1R3J5B3_9ROSI2.790e-6256.57Appr-1-p processing n=1 Tax=Corchorus olitorius Ta... [more]
A0A250XK20_9CHLO4.620e-6258.99Macro domain-containing protein n=1 Tax=Chlamydomo... [more]
A0A8B8PZY6_9MYRT3.140e-6153.92uncharacterized protein LOC115748117 n=1 Tax=Rhoda... [more]
UPI001CB9B1845.580e-6153.61macro domain-containing protein VPA0103 isoform X1... [more]
UPI0005FB62972.190e-6055.43macro domain-containing protein VPA0103 isoform X1... [more]
A0A5C7GZP7_9ROSI2.740e-6056.04Macro domain-containing protein n=1 Tax=Acer yangb... [more]
UPI0011D2ACB03.430e-6057.69uncharacterized protein LOC115663435 n=1 Tax=Syzyg... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig85contigS-ischiensis_contig85:504540..514502 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score216.9
Seed ortholog evalue2.4e-53
Seed eggNOG ortholog2880.D7G8R1
EggNOG free text desc.ADP-D-ribose binding
EggNOG OGsCOG2110@1,KOG2633@2759
COG Functional cat.KLT
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionMacro domain
Ec32 orthologEc-22_002680.1
Exons10
Model size1978
Cds size1599
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig85.20161.1prot_S-ischiensis_contig85.20161.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig85 504747..514330 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817343.366335-UTR-S-ischiensis_contig85:504539..5047461622817343.366335-UTR-S-ischiensis_contig85:504539..504746Schizocladia ischiensis KU_0333UTRS-ischiensis_contig85 504540..504746 +
1695741042.5574574-UTR-S-ischiensis_contig85:504539..5047461695741042.5574574-UTR-S-ischiensis_contig85:504539..504746Schizocladia ischiensis KU_0333UTRS-ischiensis_contig85 504540..504746 +
1622817343.4974265-UTR-S-ischiensis_contig85:514330..5145021622817343.4974265-UTR-S-ischiensis_contig85:514330..514502Schizocladia ischiensis KU_0333UTRS-ischiensis_contig85 514331..514502 +
1695741042.6963744-UTR-S-ischiensis_contig85:514330..5145021695741042.6963744-UTR-S-ischiensis_contig85:514330..514502Schizocladia ischiensis KU_0333UTRS-ischiensis_contig85 514331..514502 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817343.3799078-CDS-S-ischiensis_contig85:504746..5047671622817343.3799078-CDS-S-ischiensis_contig85:504746..504767Schizocladia ischiensis KU_0333CDSS-ischiensis_contig85 504747..504767 +
1695741042.5801175-CDS-S-ischiensis_contig85:504746..5047671695741042.5801175-CDS-S-ischiensis_contig85:504746..504767Schizocladia ischiensis KU_0333CDSS-ischiensis_contig85 504747..504767 +
1622817343.3916953-CDS-S-ischiensis_contig85:504956..5050531622817343.3916953-CDS-S-ischiensis_contig85:504956..505053Schizocladia ischiensis KU_0333CDSS-ischiensis_contig85 504957..505053 +
1695741042.591044-CDS-S-ischiensis_contig85:504956..5050531695741042.591044-CDS-S-ischiensis_contig85:504956..505053Schizocladia ischiensis KU_0333CDSS-ischiensis_contig85 504957..505053 +
1622817343.4031355-CDS-S-ischiensis_contig85:505787..5059191622817343.4031355-CDS-S-ischiensis_contig85:505787..505919Schizocladia ischiensis KU_0333CDSS-ischiensis_contig85 505788..505919 +
1695741042.6054683-CDS-S-ischiensis_contig85:505787..5059191695741042.6054683-CDS-S-ischiensis_contig85:505787..505919Schizocladia ischiensis KU_0333CDSS-ischiensis_contig85 505788..505919 +
1622817343.4155266-CDS-S-ischiensis_contig85:506588..5066411622817343.4155266-CDS-S-ischiensis_contig85:506588..506641Schizocladia ischiensis KU_0333CDSS-ischiensis_contig85 506589..506641 +
1695741042.6156418-CDS-S-ischiensis_contig85:506588..5066411695741042.6156418-CDS-S-ischiensis_contig85:506588..506641Schizocladia ischiensis KU_0333CDSS-ischiensis_contig85 506589..506641 +
1622817343.4265723-CDS-S-ischiensis_contig85:507361..5074151622817343.4265723-CDS-S-ischiensis_contig85:507361..507415Schizocladia ischiensis KU_0333CDSS-ischiensis_contig85 507362..507415 +
1695741042.626137-CDS-S-ischiensis_contig85:507361..5074151695741042.626137-CDS-S-ischiensis_contig85:507361..507415Schizocladia ischiensis KU_0333CDSS-ischiensis_contig85 507362..507415 +
1622817343.4374382-CDS-S-ischiensis_contig85:508476..5085231622817343.4374382-CDS-S-ischiensis_contig85:508476..508523Schizocladia ischiensis KU_0333CDSS-ischiensis_contig85 508477..508523 +
1695741042.6367316-CDS-S-ischiensis_contig85:508476..5085231695741042.6367316-CDS-S-ischiensis_contig85:508476..508523Schizocladia ischiensis KU_0333CDSS-ischiensis_contig85 508477..508523 +
1622817343.448699-CDS-S-ischiensis_contig85:509700..5097581622817343.448699-CDS-S-ischiensis_contig85:509700..509758Schizocladia ischiensis KU_0333CDSS-ischiensis_contig85 509701..509758 +
1695741042.6472535-CDS-S-ischiensis_contig85:509700..5097581695741042.6472535-CDS-S-ischiensis_contig85:509700..509758Schizocladia ischiensis KU_0333CDSS-ischiensis_contig85 509701..509758 +
1622817343.4612637-CDS-S-ischiensis_contig85:510564..5106331622817343.4612637-CDS-S-ischiensis_contig85:510564..510633Schizocladia ischiensis KU_0333CDSS-ischiensis_contig85 510565..510633 +
1695741042.6578708-CDS-S-ischiensis_contig85:510564..5106331695741042.6578708-CDS-S-ischiensis_contig85:510564..510633Schizocladia ischiensis KU_0333CDSS-ischiensis_contig85 510565..510633 +
1622817343.4727652-CDS-S-ischiensis_contig85:512353..5124521622817343.4727652-CDS-S-ischiensis_contig85:512353..512452Schizocladia ischiensis KU_0333CDSS-ischiensis_contig85 512354..512452 +
1695741042.668949-CDS-S-ischiensis_contig85:512353..5124521695741042.668949-CDS-S-ischiensis_contig85:512353..512452Schizocladia ischiensis KU_0333CDSS-ischiensis_contig85 512354..512452 +
1622817343.4849603-CDS-S-ischiensis_contig85:513361..5143301622817343.4849603-CDS-S-ischiensis_contig85:513361..514330Schizocladia ischiensis KU_0333CDSS-ischiensis_contig85 513362..514330 +
1695741042.6831303-CDS-S-ischiensis_contig85:513361..5143301695741042.6831303-CDS-S-ischiensis_contig85:513361..514330Schizocladia ischiensis KU_0333CDSS-ischiensis_contig85 513362..514330 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig85.20161.1

>prot_S-ischiensis_contig85.20161.1 ID=prot_S-ischiensis_contig85.20161.1|Name=mRNA_S-ischiensis_contig85.20161.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=533bp
MRLFYSVGVSRAGSYWAALLALGPSHRLLSVGSGPIMAPGRGSKRLPVEA
RGARKMSRDADDHSNVRREFQLNADGALLAISKGDLTKWEGDAIVNAANE
RMLDGGGVDGAIHRAAGRELLSACLEEPEVEEGVRCPTGQARITPGFRLP
AKHVIHTVGPVYDSPEESAPLLRSAYQASLTLARDKKLRRIAFPAISCGI
FGYPLKEAAEIAVMACKDHVGDLEMVEFLMFDNKAYWAWVNTAQEMLPPG
LHAPGAKSGPETATDTPATEEPAEASPAQAQAGGHEPANEVKASAEADAR
TGREAMDTDTTRDGAAAVAAAAPATAAAAAAAAAATGVGEPMETDADTEA
GPSKQSDSETQPHPASTSASTSTCAAPSPSMATAAHAAGPAPVAPAAATA
ECKQARPGWAAPVTDAEAEPSPGSQPGVAGVAPPAGAQAQKPVEPETGVE
NGPLAQETERALLPSLATQANDARSRCEPEGPGPASSEPETGGTDDSEGV
AGHGATGDAAAAAEATAATEPRLPSGSDGGKA*
back to top

mRNA from alignment at S-ischiensis_contig85:504540..514502+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig85.20161.1 ID=mRNA_S-ischiensis_contig85.20161.1|Name=mRNA_S-ischiensis_contig85.20161.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=9963bp|location=Sequence derived from alignment at S-ischiensis_contig85:504540..514502+ (Schizocladia ischiensis KU_0333)
CAAGTGGCAAGTGCTCAAAAGGTGCAGCTACCTGCAGCTGCAAGGCCGGC ACTCCAGGGCGGGCGCTGTCCAGTTTTGCACGCCCCGGGTGTGCAGTGAA GACAACCTGAAGGGGGAACAACTTTCCACAGGCCGGGGGTGTTTCTGCGC TTTCTTGTCCAGCGTCTGTTCTCCTCCGTGGTGGGTGCGCCAGGGAGGAG CCTGTACATGCGTCTGTTCTACTCCGTGGTGGGTGGACGGCCACGCGATT AGTGCTGCTTTCTTCTCACTGCGAAGTACTAGTACATTTAGATAGTCCTG TTTTCTTCTCACTACGAATCACTAGTACGTTTAGGTAGGGCGTTCCCATG TCGCGCAAGGTGGCGAGGGGACCTGAAGTTCGCGCCCGCCTCCCCCTTGA ACGCACCGTCGCTGCAGGGTGTCTCACGCGCCGGGAGTTATTGGGCTGCT TTGTTGGCTCTTGGGCCTTCCCACAGGCTGCTGAGTGTGGGCTCAGGCCC GATAATGGCGCCGGGTGAGCTCCGTTCAAACATTTTTTTGGTCGCGTAGA CTTTGCAATGAGTCGTTTTGGGTTTAGCCAATCCTGGAGCCTGCCTTCCC AATGCTCGGCGCCTGTTGAATTGGCTCTCACGTCTGGCAAAATAGGCTTT CGCCGGCTGCACCTGAGGCACTTGCATGCCCATTCTACCACATGCGGTGT ACTAAAGGGGAGGGGCCCTCACGACGGTCCCTCCCTTGCCTGCAAGCAGG CTGGGGATTTAGCGGTTAACCGGTCAGCGCGGTGTCGACTTGACCCCGAG GTAAAGATTTGGACAGCTCAGGCAACATGACCTTACTTGTACTCATGCCA CGCTGCACTGCAAAGCGCGTATCAACTTATGAAAGGTGCCGCTAGTTTGG TCTACCAGTCGGCGCGGGACGCGCTGCGAACGGTGCTGCGCAGCGGGAGA AATCCCTGCCAAGACATGCCACAACCGCCAAACAGCGTCACGACATGCAG ATATCCGATCCTGTTCGGCACCCCCGTGGCTGATGCCCACACGCCATTGC AGTACAGGACTGTACAGTACAGTAAAGTACAGAACTGCACCGGCTTGTGT TGCTTCTTTGCTTGGTTTCTATGCCCTGCGGGTGAAAAGAAGGGCTTCTC ATGAGGTCCCCACCTCAGGCTGTTGGGACGGGGCCCGGAACTCGCATTCA ATCAAAAGTAGTTTGCACAATAAGCGCGAACGTATCCGGATCTCGCAGGC AGGGGAAGCAAGAGATTGCCGGTGGAGGCACGCGGCGCCCGGAAAATGTC GCGTGATGCAGACGACCACAGCAACGTACGAAGGGAGTTCCAACTGAACG CCGACGGGGCCCTCCTGGCAATCTCCAAAGGTAAGCCATTTACCTAGTGT TGTGAACTGGTGCCGGTTCTTACCGGTCGGTACCAGCTACATGGTTTATC CGGTTAGCCGACCGGCGGCCAATCAATCGTAGCCAGAGCGGGTGACATGA TCGTTGTTCGTTGATTTTGGCAATATGTTATTCGCCGTTACCGGCAACCG GTTATAAACTGGTAGGCCTTGCCAGTTCACAACTCTAGCCATTCCTATCG TGCTGGGTACGGACCTGGTCCCTCCCTCCCGCCTTGAGCGGAGGGGTGGT CCCTCCCTCCCGCACCTAATATGGCTTGCGAGGGGCGGGAGGGAGGGTGT TGCGGGAGCTGTGATCTGTGTGTGCGTGGTCAAAGGTCTCCTAATTACTT GGGTGTTTTGGAACCAAGTCTGCCTACTGTAGCTGCTTGGGCCCGTGAAC CTCCTTCTCCCTAACTACTTGGACGTTTTGAAAGAAGGGTCTCAGGACTA CTTGCGCAGCAAGTATATGTGTATATGTACTCACGTTGTGCTTGCCATAG TCCCGAGACCGTTGATCACGCACCTCGATCGAGGCGGAGCCCCCACGTGT ACATCGCACACCTGCCGATTCACCAAACAACTTGGGATAGCCGTGCAACT CTGTGCGACTGTCACTGTGACTGTTGTGTGGTGTGGTGTGGTTCATCAGG CGACCTCACCAAGTGGGAGGGAGACGCCATCGTCAACGCCGCCAACGAAC GGGTGAGTGCAGGCAAAGGCGGGGAGGGAGGGGGGGAGGGAGAGAGAGAG AGAGAGAGAGAGAGAGAGAGAGGGAGAGATGGAGGAAGGGAGGGAGGGAG GGAGGGAGAGAGAGAGAGGTGTGGCTTACCAGAAAGTACATGAAGCACTG TACATGGTACTAGGTACAGCAGTAGAGTTCCTGACAGCACGAGCCCATGG CTGTACTGTAGGTAGTGTAGAGTGCTCTCGAGTACGTGTACTACTGTACT TCGAAGTACGAAGTATATCTCTCGCTTCGTTTTTTATCCTACTGTACCCG TGTAATCGTGCGTGTCTGAACGCTGCCGCAGAACACCGGCGACGCCTGTA CTGCGAAGTACATACTTTCTGTGGGTGCGGGCCACGTTACTAAAGACCTC AACAGTGGCCTGCCTTGGCATGACTACTTTCAAAACTGCTTCGAAATGCT TGACCTAGAACAACTAACGGCATGTCATCCTTCCCGTCGGTACGTAGCCG GGCTATTGCGCATACTCGTACAGATTACTGACTGCCCCCATCCTTGGGCC CCGATGCCTGGATCCCCGCCCTTTCCACCCGGCTATGCATCTGACCAACC GCATGACTTGACATGCATGTAGCATGTGACACCTCTGTTTGTTGTGTGCG TACTGACCGGGTCGGGGCGGAACGCCGCGCTTGCGTGCATGGCATGGTGA TGATGGTGATGTATGTCGTCAGATGCTCGACGGAGGAGGTGTGGATGGGG CTATTCACCGCGCTGCTGGGAGAGAGGTGAGCTGAGCTTGCATGGACATC CGCACATCTGCAGCACAGGCGTCTTGCTTGGGTGTACAACTTCCAAGTCA GCTACGGTACACTACTGTAGTACTACATATATGTACTCACGTTGTGCTTG CCGTAGTCCCGAGACCATTGACGCCTCGGTCGAGACGGAGCAGGACCCCT CCCTTCCCTGGCAGAGCCAGGATGGGAGGAGGTGGCCACCCCCCCGCCAG AAGCGGAGGGGTGGCCAAGTCCATACCCCCCCCATCCCCAATTCCTGAGA GTCCGGGTTGGGGGGGGGCCTCCCCTACTAGGCCGGTATTTATGTATTTG CTGTTCGTTTCATGAAGTACACTGAATTGCCGGGGAGGGAGGGGGGATGG GGGGGGCGGGGTTATGAGATACCCGAGTTCACCTGTCTGTTGCGTCGCAG TTCCTGAGTGTCGTGGCGTGGGAGTGATTTGCTACCCACAGTACGGTAGC GTGCATGTGTTGCTGCAGCTACCGTACTGCACTGTACTGCTCTGAGTACA GCTGCAGCTTAGCACCACTTGCGATTTGCTAGCCACTGTACGGTAGCGTA CGTGTGTTGCTGCAGCTACTGTACTGTAATGCTTTGAATACAGTTGCAGC TCAACACCACTTGCGATTTGCTAGCCACTCTACGGTAGCGTACATGCGTT GCTGCAGCTACTGTACCGTACTGTGCCATACTGCTTCGAGTACAGTTGCA GCTTAGCATCATTTCACGGTGATACAGTGATGCGATGCCATGTGATGTAC CCACCGTACTGTACTACTGTAACACTTACACACGCAGTTCTCCGGCTGTA ATATGGCTGTGCAGGGCCTCCGAGTGATGTGCAAATGAAACACTGACGGG ATGATCAGCCTGCGCCGGCTGTGTTGATGCTCGAGCACACACACACACAC GCGCGCGCGCGGGCATGTATCCGCATATGAGCAGGCACATACAGTGCTTT GCACCTTCTGTTATACTTGCACGTAACACGGCGGGGCTTAACCCATTATT GTGATGCCGGCCCTGCGTCTGTGACGTGATGTGACAGCTCCTGTCTGCGT GCCTGGAAGAACCGGAGGTGGAAGAAGGCGTGAGGTGAGCAGATTATCTA CTGGTAGAGCAAGTACTGTAAGTGGTTTCGGAACAAACTGACGTATTGAT TGGCCGAACATGTGGAGACGGCCGTCTGCTGTTGGAAGTGTGTGGTTTGC CATCTCAAGTACTTGGTACTCTGTAGTATTATCAGTTTGTCCCCCCCGAT GAACAATAATCGACACTGGCCGATACGTTGGTGTTCACTTACAGTACAGT ATCTGTATTGTCGTCCTATGCTTTGCCACTGGGGGTGAGTGCAGAACCTC TCTTCGCCCTCCCACTCCTCGATTGTCTCATTCGTGTCCCATCTCCCCTC CCCTCCCCTCCCTGTCCCGTTCCCTTTGCCGATGTCACCGCTCCCCTCTC CTCTCCTCTGCTCTGCTCCCTCCCTCTCTCTGTCACCTCAGCATTGTATT CCTCCCCTTGAGCTACAAGTCCTTCCAAGTACCTCGCAGCACTTGCTGCA GTGCGTGCATCTACAGTATTGCATTGCTGCTCTGCCCCCTCGGGTATTTG ATGTTTGTTGTGTGCTGTAGCCTACTTGTAAAGTACATTGCAGTACAGTT TGGAAGAAGCACTGTACTGCACTGTACTGTCCTGTCCTGCTTGCTTATTT CCCGTCGAACGACTGTAGTTTGCATGCACTGCAGTAGCGACAATCTGTAT CGCTGTATCGCATGTCCTACATATAACATAGTACTTCGAAGTACGCTACA TTAGACGAGAACACCCACAGAGCTAGCACCGAGTTAGGCTTTTGGAACAC AGTACTTTCAAGTACTGCTTACACACGCACGAAGCACAGCACTACCGTAC CAATACCTACTGCTGCACCTACTTGGAAGTACTTGAAAATATTTGCAATG ACATGGAATGGCATGGTCATCCCCTCTTGCGGCCAGCCAAGTGACTCACA ATGACCATCGCCCACTCCCCTCCCTCGGTCTGCCCTCTGTTTTTAATTCT TTGATGTGATAACCACCAATAGAGTACGAGAACACTCAATTCTTAACGGG ACAACCACTACTCTAGCACGAGAACACTCAATCTCACACGCTTACGTTTG TACCTCTTTACTTGTACAATTCATGTGAATAGCCGCCCTCTGCTCCCCTG TCATGTCGCCCCGTCCCCTCTTGGTCCCTGCTCGCCTCCTGCAATGCATG GCAATGCACAGGTGCCCAACGGGACAGGCGCGCATCACTCCTGGCTTCCG CCTGCCTGCCAAGCATGTGGTACGTGTCATGGCCGACCTACTGTAGTACT TCTTCGACGTGGTTGAGGAGCTATTTCCAAAAACCTGATTTTTCGCCCGA ATTTCAGCGGCTACCTCATCCAAGTATGGCTAGAGTACAGGAAGCACAAA ATCTTTCTGCTTTCGGGGCTACAGCTTCCGTCGCTTCATCGCGCCCCGCT GCGTGGCATACCAGTGTGCCCCCGTTGCTCCCTTGGTTATCCCTGTCCTC ATACTGTGCTCAAAATATATAAGTACAGTGGCTGGGAGAATTGAGTTTCC AATAGTGCAAGTAGTTAGGAGACTTCATTCCGAATGTCCAAGCAGAGCTC TACTAGTAGTTAGGAGACAATCGGAAGATTGCATATATACTTCGAAGTAT ATACTTCAAGTATGTGTATACCTGGAATGGTCTCGGGACTACGGCAAGCG CTTTTGGGTGTGAGTACATATTTTGAAGTATACGGTACTTCCAAGTATAA TATCAGTACACGTACTTACCGTAATCGTCGGAGAGATCTTGCCCTCCCAT GCCAATTTTCGGGAGAAGGTTTCTCGCCGAATACTGGTCGGATTCGCGCA GGAGCACTCCGAAAATTTCCCTCAAGACCTGGGGGACCGTTTCGGAGAGT TTTCGGGACCATTCAGGACCTTCCTGGTCAGAAATATTCCCCCGAAAATT GGCCCGTGGGGGCAAAATCTCTCTGACGATTTCGGTACATATAGTAGCAT GTACAGGGGCTGGGTTGACATCCCCCCTCCCCCTCAGAATCGCCCCCCCT TTGCCTGCTGCTACTTGTATGTCAGATCCACACGGTGGGCCCTGTCTACG ACAGCCCGGAGGAGTCAGCCCCGCTGCTTAGGAGCGCATACCAGGTCGGT TGCTGTAGTATATATACCTACAGTACTACTATGTACTGACGTTGTGCTTG CCATAGTCCCGAGACCATGGACCACGCGCCTCGGTCGAGACGGAGGAAGA TCCTTTCCTCCCCTGGCAGATAGTGATGGCTAGTGTACTCTACCTACGCC AGGAACTGCAATCAGAGCGCTGCTACGACGGGGCGGGGTCTTGTCACACT ATATTTCAAGGATATACCTCGAAATATATGCATACCCCTCACGCACAAAA CGTTGTGTCCCGTCCCCGAGAATGGCTTGCCAACCGGGACAAGCTTGGGT GTTTCCTTGCGCAGAGGCGTGCGCCATGTTTCATTCGGGAAGATTCTGAC CACTTTGAGGGCACTGAAACAGGCGGTGCTTCGGTCGTAGCGCGGGGGTA CTTCACTGCAATTTATGGTATGCCGTTTGACGAGAAAAGCCTTCGTTGCC CCTGTGTGCTGCTTCTGTTGTCTGTCGGTTTTTGTGGCCCGCACGTGAAA AGAAGGGTAGCTCTTCCCACCTTGGGGTTTGGGACGGGGCCTGGAACTCA CATGCCATCACAATATTTGAAAAAGGGCGAATTCCCGCCTCCCGATCGTA GCAGGACTCATTACTTCCAGAAGTACTACCTACAGTAGATTAGGGCATAT ACGAGTGCTCGTACCTCCTCCTCCTCCTCTTCCTCCTCCTTCTCCCCCGC CCCTTCCCCCCACACGCCCCCCTCCCCTGGCGAGCTAAGGAAGGGCCACT GTTGCAGTCTTTAGTGATGTAGGCTGCACCTAGTATAGCCTTGTGTTGTC ATTGTCCTGTTAACACTCGTAACTATGCACAGTACTACTTCGAAGTACAT GTATACTTGTGTACTTCCAAGTGTTATGTGTACACGAGTCAATGGTCGTG GGACTACGGCAAGCACAGCACGAGTACAAATGACTTGCTTACTGACATTC GAGTACAGACTGTAGGTGTACAGACACGGTCGGTTGGTTACGAGCATCCA GGGGGAGTGTTGGCGGCATGTCTATGTGACAGAGCTGTTGCGTACAATAC AGGCAAGGTGAGTATTGAGTGTTCCAGTATGTTGTGTGTATGTAGAGAGT GTGTACTACTGTACAGTGCGCTACTTCCAGTAGTTGTTGTACTCGAGTAC TTGACGTTTACTGATTGTGCCTCACCCGGTGTAGTATAGCTTGCAAGGCG TTTTCAGCGAATGGAAATCAGTACATGTGCACGTACAGAGTGCCGCTGCT ACAAACTACTGTACTGTACAGTATCTAGGCGGACGCTGCAGGGGACTGGC GGGCCCAGAGGAGTACATCTGTACAGTAGCAAGCATACAGTACGGCATGC GACATACAGTTCCTAGTACAGTAGTACTGGCAATGTTGACTGTTTACCGT GGGCTGTGGGTGTGCCTCCACAAACCGCGTTTGTTTTTCGCACGTTCCAT TGCCAGGTGTGGATTGCTGTCGGCAAAGCACGCAAGGTTCTGTCGCAAGA CAAGCCAATGAGTACACATAATTTGAGTGGTAGATAAGCCGCGGCTCGTC CCGGAGCGGGACTGAACGAAGCCCTTCCTTCCCTCGCAGGGCAAGAAGAA AACAAAAATAAAGAAGCAAAGGGGCGGGGCGGGGAAAGGGGAGGGGTGGG GAAGGGGAGTCACATATACACCACTAACGTGCTGTGACGATGACGGTGAT GATGACCATGGCAGGCGTCTCTCACCCTGGCCCGGGACAAGAAGCTGCGG CGCATTGCTTTCCCAGCCATATCCTGCGGCATTTTCGGGTACCCCTTGAA AGAGGCTGCCGAGGTGAGAGCCCGTGCCACCGCCACGAGACGTACCCGCT CTTTACAATACCAGCTAGAGGCCAATTGTACTTCTACCTATGTGTGTGTG TGGACTTTGTACCTAGTAGTAGGTACTCACTCTGCGTTGAGCGCCCAACT ACTACAGTACAGTAGTACTGCACTGTGGTACTGTAGATAACGTTTTGTGC ACTTTTGTACTGTACGGCCCAGTAGGATCGGGGGACGGTATGGAAATGGC TACCCCTTCCCCCCTGGCTGAGGTGTGCCCCCCTCCTCCCATCCTGGCTC TTGCTACGGGAGGGAGGGGTCCCTGCTCCGTCTCGGTCGAGGCGTGGGGT CAATGATCTCGGGACTACGACGAGCACGGCGTGAGGGCATGTAAAACAAT CCAAGTACTACTGTCAATACTTCGAAGTGCTTCCCAAGCACTGACGACTG TAGCAAATGCTCTCGGGGGGGGCTTGAGTTTGGCTTCGAGACAGTGGTTG CAAGCCAACCTCCTTAACACCTTTACCTTGCCCTACACTTTTCACCTGCT GTGTACTGCTACTGTAGTACCTGCGGTACTTTGGACTGTCCTCAAGACCT CCATCTTTCGTTGTTGATTTCGGTCCCACGGCCACCCCATGGCTACAGGT ACGCTGCGGTGCGACGGTGATGGCGTGTGTGTGCACGCGGGACAACGCCC CCACAGTCCACATCCATGTGCACTCACTCAAGACTGCAGACAAAAACGCA CGCCCGCGTGCTCTTGCGCGCTCGCACACACACACACACACACAGCATAT GCACGTGCCCGTGTACTGCGCACGCATGCCCATTGATCCCCCCGCACCCG TGCCCTTCTACTTGCCGCACTGCCGCATATTGCTGCATGGACATGGACGT GAAACACTGCATGCCTTGTCAGATTGCCGTGATGGCGTGCAAGGACCACG TCGGCGACCTGGAGATGGTTGAATTTCTCATGTTCGACAACAAGGCCTAC TGGGCGTGGGTGAACACCGCTCAGGAGATGCTCCCTCCTGGGCTCCACGC GCCCGGGGCCAAGTCTGGGCCCGAGACCGCTACCGATACTCCCGCCACCG AAGAACCGGCTGAGGCATCGCCAGCCCAAGCGCAGGCTGGAGGGCACGAG CCTGCAAACGAGGTCAAAGCTTCTGCGGAGGCCGATGCCAGGACCGGGCG TGAGGCAATGGACACGGACACCACTCGTGATGGAGCGGCGGCGGTGGCGG CAGCCGCGCCAGCAACGGCGGCGGCGGCAGCGGCGGCGGCGGCGGCGACT GGCGTGGGTGAGCCCATGGAGACAGATGCTGATACGGAGGCTGGTCCATC CAAGCAGTCCGACTCAGAGACGCAGCCCCATCCTGCTTCTACGAGCGCAA GCACTTCTACGTGCGCAGCCCCAAGTCCAAGCATGGCTACAGCTGCGCAC GCGGCCGGCCCAGCCCCGGTGGCCCCAGCGGCGGCGACCGCGGAGTGCAA GCAAGCGAGGCCTGGCTGGGCGGCGCCGGTGACGGACGCGGAGGCCGAGC CATCGCCCGGTTCCCAACCCGGCGTTGCCGGCGTCGCCCCTCCGGCTGGG GCTCAAGCTCAGAAGCCGGTGGAGCCCGAGACCGGTGTGGAGAACGGCCC GCTGGCGCAGGAAACGGAGCGTGCCTTGCTGCCCTCACTGGCAACTCAAG CGAATGACGCTCGGAGTCGCTGTGAGCCTGAGGGGCCCGGCCCGGCGTCC TCAGAGCCTGAGACTGGTGGCACTGATGACTCGGAGGGTGTGGCCGGCCA TGGTGCTACCGGTGATGCGGCGGCGGCGGCAGAGGCAACCGCCGCGACCG AGCCGCGCCTCCCCAGTGGGAGTGATGGCGGGAAAGCCTGACCCGAGGAG CCTGGTGTTTTGTCACGGGGAATTCGAGGGGCTGGGGGACTCGGAGATCT CGCCAGGTCGCGGTCTGGTTGGTCAACAACTGTTACAGTCCTGAGGATTA GGGTTGGCGATAGGGAACATGCCGTACAGGCATTCATTGCAAACCGGCTG TCCCTGGAGGTGT
back to top

Coding sequence (CDS) from alignment at S-ischiensis_contig85:504540..514502+

>mRNA_S-ischiensis_contig85.20161.1 ID=mRNA_S-ischiensis_contig85.20161.1|Name=mRNA_S-ischiensis_contig85.20161.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=3198bp|location=Sequence derived from alignment at S-ischiensis_contig85:504540..514502+ (Schizocladia ischiensis KU_0333)
ATGCGTCTGTTCTACTCCGTGATGCGTCTGTTCTACTCCGTGGGTGTCTC
ACGCGCCGGGAGTTATTGGGCTGCTTTGTTGGCTCTTGGGCCTTCCCACA
GGCTGCTGAGTGTGGGCTCAGGCCCGATAATGGCGCCGGGGTGTCTCACG
CGCCGGGAGTTATTGGGCTGCTTTGTTGGCTCTTGGGCCTTCCCACAGGC
TGCTGAGTGTGGGCTCAGGCCCGATAATGGCGCCGGGCAGGGGAAGCAAG
AGATTGCCGGTGGAGGCACGCGGCGCCCGGAAAATGTCGCGTGATGCAGA
CGACCACAGCAACGTACGAAGGGAGTTCCAACTGAACGCCGACGGGGCCC
TCCTGGCAATCTCCAAAGGCAGGGGAAGCAAGAGATTGCCGGTGGAGGCA
CGCGGCGCCCGGAAAATGTCGCGTGATGCAGACGACCACAGCAACGTACG
AAGGGAGTTCCAACTGAACGCCGACGGGGCCCTCCTGGCAATCTCCAAAG
GCGACCTCACCAAGTGGGAGGGAGACGCCATCGTCAACGCCGCCAACGAA
CGGGCGACCTCACCAAGTGGGAGGGAGACGCCATCGTCAACGCCGCCAAC
GAACGGATGCTCGACGGAGGAGGTGTGGATGGGGCTATTCACCGCGCTGC
TGGGAGAGAGATGCTCGACGGAGGAGGTGTGGATGGGGCTATTCACCGCG
CTGCTGGGAGAGAGCTCCTGTCTGCGTGCCTGGAAGAACCGGAGGTGGAA
GAAGGCGTGAGCTCCTGTCTGCGTGCCTGGAAGAACCGGAGGTGGAAGAA
GGCGTGAGGTGCCCAACGGGACAGGCGCGCATCACTCCTGGCTTCCGCCT
GCCTGCCAAGCATGTGGTGCCCAACGGGACAGGCGCGCATCACTCCTGGC
TTCCGCCTGCCTGCCAAGCATGTGATCCACACGGTGGGCCCTGTCTACGA
CAGCCCGGAGGAGTCAGCCCCGCTGCTTAGGAGCGCATACCAGATCCACA
CGGTGGGCCCTGTCTACGACAGCCCGGAGGAGTCAGCCCCGCTGCTTAGG
AGCGCATACCAGGCGTCTCTCACCCTGGCCCGGGACAAGAAGCTGCGGCG
CATTGCTTTCCCAGCCATATCCTGCGGCATTTTCGGGTACCCCTTGAAAG
AGGCTGCCGAGGCGTCTCTCACCCTGGCCCGGGACAAGAAGCTGCGGCGC
ATTGCTTTCCCAGCCATATCCTGCGGCATTTTCGGGTACCCCTTGAAAGA
GGCTGCCGAGATTGCCGTGATGGCGTGCAAGGACCACGTCGGCGACCTGG
AGATGGTTGAATTTCTCATGTTCGACAACAAGGCCTACTGGGCGTGGGTG
AACACCGCTCAGGAGATGCTCCCTCCTGGGCTCCACGCGCCCGGGGCCAA
GTCTGGGCCCGAGACCGCTACCGATACTCCCGCCACCGAAGAACCGGCTG
AGGCATCGCCAGCCCAAGCGCAGGCTGGAGGGCACGAGCCTGCAAACGAG
GTCAAAGCTTCTGCGGAGGCCGATGCCAGGACCGGGCGTGAGGCAATGGA
CACGGACACCACTCGTGATGGAGCGGCGGCGGTGGCGGCAGCCGCGCCAG
CAACGGCGGCGGCGGCAGCGGCGGCGGCGGCGGCGACTGGCGTGGGTGAG
CCCATGGAGACAGATGCTGATACGGAGGCTGGTCCATCCAAGCAGTCCGA
CTCAGAGACGCAGCCCCATCCTGCTTCTACGAGCGCAAGCACTTCTACGT
GCGCAGCCCCAAGTCCAAGCATGGCTACAGCTGCGCACGCGGCCGGCCCA
GCCCCGGTGGCCCCAGCGGCGGCGACCGCGGAGTGCAAGCAAGCGAGGCC
TGGCTGGGCGGCGCCGGTGACGGACGCGGAGGCCGAGCCATCGCCCGGTT
CCCAACCCGGCGTTGCCGGCGTCGCCCCTCCGGCTGGGGCTCAAGCTCAG
AAGCCGGTGGAGCCCGAGACCGGTGTGGAGAACGGCCCGCTGGCGCAGGA
AACGGAGCGTGCCTTGCTGCCCTCACTGGCAACTCAAGCGAATGACGCTC
GGAGTCGCTGTGAGCCTGAGGGGCCCGGCCCGGCGTCCTCAGAGCCTGAG
ACTGGTGGCACTGATGACTCGGAGGGTGTGGCCGGCCATGGTGCTACCGG
TGATGCGGCGGCGGCGGCAGAGGCAACCGCCGCGACCGAGCCGCGCCTCC
CCAGTGGGAGTGATGGCGGGAAAGCCTGAATTGCCGTGATGGCGTGCAAG
GACCACGTCGGCGACCTGGAGATGGTTGAATTTCTCATGTTCGACAACAA
GGCCTACTGGGCGTGGGTGAACACCGCTCAGGAGATGCTCCCTCCTGGGC
TCCACGCGCCCGGGGCCAAGTCTGGGCCCGAGACCGCTACCGATACTCCC
GCCACCGAAGAACCGGCTGAGGCATCGCCAGCCCAAGCGCAGGCTGGAGG
GCACGAGCCTGCAAACGAGGTCAAAGCTTCTGCGGAGGCCGATGCCAGGA
CCGGGCGTGAGGCAATGGACACGGACACCACTCGTGATGGAGCGGCGGCG
GTGGCGGCAGCCGCGCCAGCAACGGCGGCGGCGGCAGCGGCGGCGGCGGC
GGCGACTGGCGTGGGTGAGCCCATGGAGACAGATGCTGATACGGAGGCTG
GTCCATCCAAGCAGTCCGACTCAGAGACGCAGCCCCATCCTGCTTCTACG
AGCGCAAGCACTTCTACGTGCGCAGCCCCAAGTCCAAGCATGGCTACAGC
TGCGCACGCGGCCGGCCCAGCCCCGGTGGCCCCAGCGGCGGCGACCGCGG
AGTGCAAGCAAGCGAGGCCTGGCTGGGCGGCGCCGGTGACGGACGCGGAG
GCCGAGCCATCGCCCGGTTCCCAACCCGGCGTTGCCGGCGTCGCCCCTCC
GGCTGGGGCTCAAGCTCAGAAGCCGGTGGAGCCCGAGACCGGTGTGGAGA
ACGGCCCGCTGGCGCAGGAAACGGAGCGTGCCTTGCTGCCCTCACTGGCA
ACTCAAGCGAATGACGCTCGGAGTCGCTGTGAGCCTGAGGGGCCCGGCCC
GGCGTCCTCAGAGCCTGAGACTGGTGGCACTGATGACTCGGAGGGTGTGG
CCGGCCATGGTGCTACCGGTGATGCGGCGGCGGCGGCAGAGGCAACCGCC
GCGACCGAGCCGCGCCTCCCCAGTGGGAGTGATGGCGGGAAAGCCTGA
back to top