mRNA_S-ischiensis_contig85.20124.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig85.20124.1
Unique NamemRNA_S-ischiensis_contig85.20124.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
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BLAST of mRNA_S-ischiensis_contig85.20124.1 vs. uniprot
Match: A0A5J6VIN5_9VIRU (Uncharacterized protein n=1 Tax=Megaviridae environmental sample TaxID=1737588 RepID=A0A5J6VIN5_9VIRU)

HSP 1 Score: 153 bits (386), Expect = 8.400e-41
Identity = 85/188 (45.21%), Postives = 113/188 (60.11%), Query Frame = 1 
Query:    7 CVCVYAGPS-CQNPECYTYRKEHWYYCRVCHLWEDAEKQIYHCDKCGICRAGDRNAYRXXXXXXXXVLKEGEHHCSMSSKDFCCPVCMEALFDSRKAISYGKCSHMFHGTCLSQLLRT-DYRCPLCKKCLVDMSEQWAMMDHLMETVQVPEEYRSWRVRIFCNECETLSNVNFTVE-AYKCPSCGGYN 561
            C+C+    S C NP CY++ K H YYCR+C LW++A   IYHCDKCG+CR G +  Y XXXXXXXXV     H C  S+ D  C VC++ L DSR   ++ +C+H+ H  C  +LL   +YRCP+CKK  +DM EQW + D +  T+  P EY +W     CN+C   S   F +E  Y+C  C  YN
Sbjct:   88 CMCIQKKASVCGNPICYSFNKPHKYYCRICSLWQNAPGDIYHCDKCGMCRIGRQEDYEXXXXXXXXVKDIQNHACISSAIDAKCSVCLDGLHDSRLPSTFMQCNHIIHALCFQKLLLGGEYRCPICKKSAIDMKEQWKIYDQI--TLHSPPEY-NWMQAYTCNDCGKKSKKRFNLENLYRC-ECNSYN 271
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BLAST of mRNA_S-ischiensis_contig85.20124.1 vs. uniprot
Match: A0A8C5MW14_9ANUR (Cyclin dependent kinase like 2 n=3 Tax=Leptobrachium leishanense TaxID=445787 RepID=A0A8C5MW14_9ANUR)

HSP 1 Score: 140 bits (354), Expect = 7.370e-36
Identity = 66/170 (38.82%), Postives = 92/170 (54.12%), Query Frame = 1 
Query:   76 YYCRVCHLWEDAEKQIYHCDKCGICRAGDRNAYRXXXXXXXXV--LKEGEHHCSMSSKDFCCPVCMEALFDSRKAISYGKCSHMFHGTCLSQLLRTDYRCPLCKKCLVDMSEQWAMMDHLMETVQVPEEYRSWRVRIFCNECETLSNVNFTVEAYKCPSCGGYNAVPQGR 579
            YYC VCHL+ D +K+ YHCD CGICR G +  Y         +    +G H C  +     CP+C+E +  SR       C H+ H TC   +L+  YRCPLC + ++DMS+QW ++D  +    +P +Y++  V I CN+C T S   F V   KC SC  YN   +GR
Sbjct:  130 YYCSVCHLY-DKDKKQYHCDGCGICRIGPKEDYEHCLKCNLCLPLSLKGNHKCIENVSRQNCPICLEDMHTSRIGTRILPCGHLLHSTCYKAMLQQGYRCPLCMRSVLDMSDQWQLLDDEVARTPMPLDYQNMMVEILCNDCSTRSTAPFHVLGMKCESCNSYNTTQEGR 298
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BLAST of mRNA_S-ischiensis_contig85.20124.1 vs. uniprot
Match: A0A6P7WTL4_9AMPH (RING finger and CHY zinc finger domain-containing protein 1 n=4 Tax=Gymnophiona TaxID=8445 RepID=A0A6P7WTL4_9AMPH)

HSP 1 Score: 138 bits (348), Expect = 1.540e-35
Identity = 71/170 (41.76%), Postives = 97/170 (57.06%), Query Frame = 1 
Query:   76 YYCRVCHLWEDAEKQIYHCDKCGICRAGDRNAY--RXXXXXXXXVLKEGEHHCSMSSKDFCCPVCMEALFDSRKAISYGKCSHMFHGTCLSQLLRTDYRCPLCKKCLVDMSEQWAMMDHLMETVQVPEEYRSWRVRIFCNECETLSNVNFTVEAYKCPSCGGYNAVPQGR 579
            YYC VCHL+ DA+K+ YHCDKCGICR G +  +   XXXXXX  +  +G H C  +     CP+C+E +  SR       C H+ H TC  ++L+  YRCPLC +  +DM+  W  +D  +    +P EY++  V I CN+C   SNV F +   KC SC  YN    G+
Sbjct:   73 YYCDVCHLF-DADKKQYHCDKCGICRIGPKEDFFXXXXXXXXLGLNLQGNHKCIENVSRQNCPICLEDIHTSRIGAHVLPCGHLLHRTCYEEMLKKGYRCPLCMRSALDMTNYWRQLDDEVAQTPMPTEYQNMTVEILCNDCSARSNVQFHILGMKCQSCESYNTALDGK 241
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BLAST of mRNA_S-ischiensis_contig85.20124.1 vs. uniprot
Match: A0A3S1AGG8_ELYCH (Uncharacterized protein n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A3S1AGG8_ELYCH)

HSP 1 Score: 137 bits (344), Expect = 1.270e-34
Identity = 71/167 (42.51%), Postives = 104/167 (62.28%), Query Frame = 1 
Query:   76 YYCRVCHLWEDAEKQIYHCDKCGICRAGDRNAYRXXXXXXXXVLKE--GEHHCSMSSKDFCCPVCMEALFDSRKAISYGKCSHMFHGTCLSQLLRT-DYRCPLCKKCLVDMSEQWAMMDHLMETVQVPEEYRSWRVRIFCNECETLSNVNFTVEAYKCPSCGGYNAV 567
            Y+C  C L++   KQ +HCDKCG+CR G +  + XXXXXXXX++KE  G+H C +++    CP+C+E L  SR  +   +C HM H  CL +  ++ ++ CPLCK+ L+DMS+ W  MD    +V++PEE RS ++ I C +C      +F  E  KC +CG YN V
Sbjct:  114 YFCSKCRLYDRDRKQ-FHCDKCGLCRVGPKEKFXXXXXXXXXLMKELEGKHKCVVNAAKSSCPICLEYLHTSRTGLQIPRCGHMMHLKCLEEYFKSGNFTCPLCKESLLDMSKCWDRMDEACASVEMPEELRSIKLGILCQDCHKECKQHFNTEGLKCMNCGSYNTV 279
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BLAST of mRNA_S-ischiensis_contig85.20124.1 vs. uniprot
Match: A0A2P6QGR8_ROSCH (Putative aminoacyltransferase, E1 ubiquitin-activating enzyme n=2 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6QGR8_ROSCH)

HSP 1 Score: 135 bits (341), Expect = 4.640e-34
Identity = 73/165 (44.24%), Postives = 95/165 (57.58%), Query Frame = 1 
Query:   76 YYCRVCHLWED-AEKQIYHCDKCGICR-AGDRNAYRXXXXXXXXVLKEGEHHCSMSSKDFCCPVCMEALFDSRKAISYGKCSHMFHGTCLSQL-LRTDYRCPLCKKCLVDMSEQWAMMDHLMETVQVPEEYRSWRVRIFCNECETLSNVNFTVEAYKCPSCGGYN 561
            Y+C +C+ ++D   K IYHCDKCGICR  G  N   XXXXXXX      +H C   +    CPVC E LFDSR+ IS  +C H  H  CL ++ L   Y CP+C K + DMS  W  +D L+ +  +P  YR+  V I CN+C     V+F + A+KC SC  YN
Sbjct:  107 YFCAICNFYDDDVSKDIYHCDKCGICRIGGGENXXXXXXXXXXYPKSVKDHRCIERAMHHNCPVCFEFLFDSRRDISILRCGHTIHCECLKEMRLHAQYSCPICSKSVYDMSNLWKKLDELVASTPMPHAYRTKMVGILCNDCGAKGEVSFHIVAHKCLSCNSYN 271
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BLAST of mRNA_S-ischiensis_contig85.20124.1 vs. uniprot
Match: UPI000854AFEE (RING finger and CHY zinc finger domain-containing protein 1 isoform X1 n=5 Tax=Ranoidea TaxID=30352 RepID=UPI000854AFEE)

HSP 1 Score: 134 bits (336), Expect = 1.040e-33
Identity = 65/173 (37.57%), Postives = 93/173 (53.76%), Query Frame = 1 
Query:   76 YYCRVCHLWEDAEKQIYHCDKCGICRAGDRNAYRXXXXXXXXVLKE--GEHHC--SMSSKDFCCPVCMEALFDSRKAISYGKCSHMFHGTCLSQLLRTDYRCPLCKKCLVDMSEQWAMMDHLMETVQVPEEYRSWRVRIFCNECETLSNVNFTVEAYKCPSCGGYNAVPQGRI 582
            YYC VCHL+ D +K+ YHCD CGICR G +  +         +     G H C  ++S +D  CP+C+E +  SR       C H+ H  C   +L+  YRCPLC + ++DMS+ W  +D  +    +P EY++  V I CN+C   S V F V   KC SC  YN   +G++
Sbjct:   81 YYCDVCHLF-DKDKKQYHCDGCGICRIGPKEQFEHCAKCNLCLPLSFRGNHKCIENVSRQD--CPICLEDIHTSRVGARVLPCGHLLHSPCYENMLKQGYRCPLCMRSVLDMSQYWRRLDEEVAQTPMPTEYQNMTVNILCNDCSHRSTVPFHVLGMKCESCKSYNTTQEGKL 250
[Close]
BLAST of mRNA_S-ischiensis_contig85.20124.1 vs. uniprot
Match: A0A8C5MUQ6_9ANUR (Cyclin dependent kinase like 2 n=2 Tax=Leptobrachium leishanense TaxID=445787 RepID=A0A8C5MUQ6_9ANUR)

HSP 1 Score: 140 bits (354), Expect = 1.620e-33
Identity = 66/170 (38.82%), Postives = 92/170 (54.12%), Query Frame = 1 
Query:   76 YYCRVCHLWEDAEKQIYHCDKCGICRAGDRNAYRXXXXXXXXV--LKEGEHHCSMSSKDFCCPVCMEALFDSRKAISYGKCSHMFHGTCLSQLLRTDYRCPLCKKCLVDMSEQWAMMDHLMETVQVPEEYRSWRVRIFCNECETLSNVNFTVEAYKCPSCGGYNAVPQGR 579
            YYC VCHL+ D +K+ YHCD CGICR G +  Y         +    +G H C  +     CP+C+E +  SR       C H+ H TC   +L+  YRCPLC + ++DMS+QW ++D  +    +P +Y++  V I CN+C T S   F V   KC SC  YN   +GR
Sbjct:  605 YYCSVCHLY-DKDKKQYHCDGCGICRIGPKEDYEHCLKCNLCLPLSLKGNHKCIENVSRQNCPICLEDMHTSRIGTRILPCGHLLHSTCYKAMLQQGYRCPLCMRSVLDMSDQWQLLDDEVARTPMPLDYQNMMVEILCNDCSTRSTAPFHVLGMKCESCNSYNTTQEGR 773
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BLAST of mRNA_S-ischiensis_contig85.20124.1 vs. uniprot
Match: UPI0011C3E785 (RING finger and CHY zinc finger domain-containing protein 1 n=1 Tax=Calypte anna TaxID=9244 RepID=UPI0011C3E785)

HSP 1 Score: 132 bits (331), Expect = 3.860e-33
Identity = 62/172 (36.05%), Postives = 94/172 (54.65%), Query Frame = 1 
Query:   76 YYCRVCHLWEDAEKQIYHCDKCGICRAGDRNAYRXXXXXXXXVLK--EGEHHC--SMSSKDFCCPVCMEALFDSRKAISYGKCSHMFHGTCLSQLLRTDYRCPLCKKCLVDMSEQWAMMDHLMETVQVPEEYRSWRVRIFCNECETLSNVNFTVEAYKCPSCGGYNAVPQGR 579
            YYC +CHL+ D +K+ YHC++CGICR G +  +         +     G+H C  ++S +D  CP+C+E +  SR       C H+ H TC   +L+ DYRCPLC + ++DM+ +W  +D  +    +P EY++  V I CN+C   S V F     KC +C  YN    G+
Sbjct:   74 YYCDICHLF-DRDKKQYHCEECGICRIGPKEDFFHCSKCNMCLRLGLRGKHKCIENVSRQD--CPICLEDIHTSRIGAHVLPCGHLLHRTCYEDMLKGDYRCPLCMRSMLDMTREWRQLDDKVAQTPMPTEYQNRMVEILCNDCSARSTVQFHFLGMKCQNCDSYNTAQDGK 242
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BLAST of mRNA_S-ischiensis_contig85.20124.1 vs. uniprot
Match: UPI00148A2372 (RING finger and CHY zinc finger domain-containing protein 1-like isoform X1 n=2 Tax=Crassostrea gigas TaxID=29159 RepID=UPI00148A2372)

HSP 1 Score: 134 bits (336), Expect = 4.360e-33
Identity = 72/189 (38.10%), Postives = 101/189 (53.44%), Query Frame = 1 
Query:   76 YYCRVCHLWEDAEKQIYHCDKCGICRAGDRNAY--RXXXXXXXXVLKEGEHHCSMSSKDFCCPVCMEALFDSRKAISYGKCSHMFHGTCLSQLLRT-DYRCPLCKKCLVDMSEQWAMMDHLMETVQVPEEYRSWRVRIFCNECETLSNVNFTVEAYKCPSCGGYNAV----PQGRIDPGCGQVGDRADT 621
            Y+C +C L++D +KQ +HCD CG+CR G R  +   XXXXX   +  +  H C   S    CPVC+E L  SR A     C H+ H  C   +L+T +Y CP+C + ++DM E W  +D  +    +PEEY+++ V+I C +C   S V F V   KC  CG YN      P+G  +  C   G  A T
Sbjct:   74 YFCEICRLYDDEDKQQFHCDGCGLCRVGGRENFYXXXXXXXCLSISMKDNHKCIEKSSHSNCPVCLEDLHTSRIAAHIPPCGHLIHYKCFKDMLKTGNYACPICGQSMLDMKEVWQNVDEEVSQCPMPEEYQNYYVQILCKDCHEESRVLFHVLGLKCQQCGSYNTCRTQEPEGAEESECTPPGVNAST 262
[Close]
BLAST of mRNA_S-ischiensis_contig85.20124.1 vs. uniprot
Match: A0A1V0SCX5_9VIRU (Zinc-finger and zinc-ribbon domain protein n=1 Tax=Indivirus ILV1 TaxID=1977633 RepID=A0A1V0SCX5_9VIRU)

HSP 1 Score: 130 bits (328), Expect = 1.060e-32
Identity = 58/163 (35.58%), Postives = 94/163 (57.67%), Query Frame = 1 
Query:   76 YYCRVCHLWEDAEKQIYHCDKCGICRAGDRNAYRXXXXXXXXVLKEG-EHHCSMSSKDFCCPVCMEALFDSRKAISYGKCSHMFHGTCLSQLLRTDYRCPLCKKCLVDMSEQWAMMDHLMETVQVPEEYRSWRVRIFCNECETLSNVNFTVEAYKCPSCGGYN 561
            YYC +CHL+++ +K  YHC +CG CR G ++ +         V K+  ++H  +  KD  CP+CM  +F S   I+   C H  H  C+++ ++T+Y+CP+C   +++       +D  +E  Q+PEEY + +  I CN+C   S VNF + A KC +CGG+N
Sbjct:   76 YYCDICHLFDNTDKDQYHCIECGFCRVGGKDNFIHCKKCNMCVRKDVFDNHKCIQLKDSLCPICMTDMFTSTTMITQMICGHYIHIDCVTEYIKTNYKCPVCSISIINTELLNKYLDQEIENTQMPEEYNNIKFNILCNDCHKESIVNFHIVALKCQNCGGFN 238
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig85.20124.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5J6VIN5_9VIRU8.400e-4145.21Uncharacterized protein n=1 Tax=Megaviridae enviro... [more]
A0A8C5MW14_9ANUR7.370e-3638.82Cyclin dependent kinase like 2 n=3 Tax=Leptobrachi... [more]
A0A6P7WTL4_9AMPH1.540e-3541.76RING finger and CHY zinc finger domain-containing ... [more]
A0A3S1AGG8_ELYCH1.270e-3442.51Uncharacterized protein n=1 Tax=Elysia chlorotica ... [more]
A0A2P6QGR8_ROSCH4.640e-3444.24Putative aminoacyltransferase, E1 ubiquitin-activa... [more]
UPI000854AFEE1.040e-3337.57RING finger and CHY zinc finger domain-containing ... [more]
A0A8C5MUQ6_9ANUR1.620e-3338.82Cyclin dependent kinase like 2 n=2 Tax=Leptobrachi... [more]
UPI0011C3E7853.860e-3336.05RING finger and CHY zinc finger domain-containing ... [more]
UPI00148A23724.360e-3338.10RING finger and CHY zinc finger domain-containing ... [more]
A0A1V0SCX5_9VIRU1.060e-3235.58Zinc-finger and zinc-ribbon domain protein n=1 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig85contigS-ischiensis_contig85:182613..188938 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score139.8
Seed ortholog evalue2.3e-30
Seed eggNOG ortholog244447.XP_008333937.1
Preferred nameRCHY1
KEGG koko:K10144
KEGG Pathwayko04115,ko04120,ko05162,map04115,map04120,map05162
GOsGO:0000151,GO:0000731,GO:0002039,GO:0003674,GO:0003824,GO:0004842,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006301,GO:0006464,GO:0006508,GO:0006511,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008270,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009893,GO:0009894,GO:0009896,GO:0009987,GO:0010604,GO:0016567,GO:0016604,GO:0016607,GO:0016740,GO:0018130,GO:0019222,GO:0019438,GO:0019538,GO:0019787,GO:0019941,GO:0019985,GO:0030162,GO:0030163,GO:0031323,GO:0031325,GO:0031329,GO:0031331,GO:0031396,GO:0031398,GO:0031399,GO:0031401,GO:0031974,GO:0031981,GO:0032268,GO:0032270,GO:0032434,GO:0032436,GO:0032446,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0036211,GO:0042176,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0045732,GO:0045862,GO:0046483,GO:0046872,GO:0046914,GO:0046983,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0051603,GO:0051716,GO:0051865,GO:0060255,GO:0061136,GO:0065007,GO:0070013,GO:0070647,GO:0070987,GO:0071704,GO:0071897,GO:0080090,GO:0090304,GO:0140096,GO:1901360,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901800,GO:1902494,GO:1903050,GO:1903052,GO:1903320,GO:1903322,GO:1903362,GO:1903364,GO:1990234,GO:2000058,GO:2000060
EggNOG free text desc.RING finger and CHY zinc finger
EggNOG OGs3920W@33154,3BGEA@33208,3CUF4@33213,4865H@7711,4940J@7742,49X4D@7898,KOG1940@1,KOG1940@2759
EC2.3.2.27
COG Functional cat.O
Best tax levelActinopterygii
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko04121
Hectar predicted targeting categoryother localisation
Exons5
Model size985
Cds size984
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig85.20124.1prot_S-ischiensis_contig85.20124.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig85 182613..188938 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817341.4649334-CDS-S-ischiensis_contig85:182612..1827941622817341.4649334-CDS-S-ischiensis_contig85:182612..182794Schizocladia ischiensis KU_0333CDSS-ischiensis_contig85 182613..182794 +
1695741040.9450498-CDS-S-ischiensis_contig85:182612..1827941695741040.9450498-CDS-S-ischiensis_contig85:182612..182794Schizocladia ischiensis KU_0333CDSS-ischiensis_contig85 182613..182794 +
1622817341.4798305-CDS-S-ischiensis_contig85:183559..1836811622817341.4798305-CDS-S-ischiensis_contig85:183559..183681Schizocladia ischiensis KU_0333CDSS-ischiensis_contig85 183560..183681 +
1695741040.9591556-CDS-S-ischiensis_contig85:183559..1836811695741040.9591556-CDS-S-ischiensis_contig85:183559..183681Schizocladia ischiensis KU_0333CDSS-ischiensis_contig85 183560..183681 +
1622817341.4944248-CDS-S-ischiensis_contig85:185844..1859841622817341.4944248-CDS-S-ischiensis_contig85:185844..185984Schizocladia ischiensis KU_0333CDSS-ischiensis_contig85 185845..185984 +
1695741040.969888-CDS-S-ischiensis_contig85:185844..1859841695741040.969888-CDS-S-ischiensis_contig85:185844..185984Schizocladia ischiensis KU_0333CDSS-ischiensis_contig85 185845..185984 +
1622817341.507265-CDS-S-ischiensis_contig85:186832..1869881622817341.507265-CDS-S-ischiensis_contig85:186832..186988Schizocladia ischiensis KU_0333CDSS-ischiensis_contig85 186833..186988 +
1695741041.0238667-CDS-S-ischiensis_contig85:186832..1869881695741041.0238667-CDS-S-ischiensis_contig85:186832..186988Schizocladia ischiensis KU_0333CDSS-ischiensis_contig85 186833..186988 +
1622817341.5215573-CDS-S-ischiensis_contig85:188554..1889381622817341.5215573-CDS-S-ischiensis_contig85:188554..188938Schizocladia ischiensis KU_0333CDSS-ischiensis_contig85 188555..188938 +
1695741041.0891798-CDS-S-ischiensis_contig85:188554..1889381695741041.0891798-CDS-S-ischiensis_contig85:188554..188938Schizocladia ischiensis KU_0333CDSS-ischiensis_contig85 188555..188938 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig85.20124.1

>prot_S-ischiensis_contig85.20124.1 ID=prot_S-ischiensis_contig85.20124.1|Name=mRNA_S-ischiensis_contig85.20124.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=328bp
MVCVCVYAGPSCQNPECYTYRKEHWYYCRVCHLWEDAEKQIYHCDKCGIC
RAGDRNAYRHCDRCSLCVLKEGEHHCSMSSKDFCCPVCMEALFDSRKAIS
YGKCSHMFHGTCLSQLLRTDYRCPLCKKCLVDMSEQWAMMDHLMETVQVP
EEYRSWRVRIFCNECETLSNVNFTVEAYKCPSCGGYNAVPQGRIDPGCGQ
VGDRADTATEPGGHATALATAGDGDGDGNGPGRDVGAPGRETTSETLADG
HLRSGNAAQGASTSTSTSSGGSSGTSGDSELDASGASSGSSSSGSQPGTG
SGSGSGGATDASDPDTDSSVAGSPQSTE
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mRNA from alignment at S-ischiensis_contig85:182613..188938+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig85.20124.1 ID=mRNA_S-ischiensis_contig85.20124.1|Name=mRNA_S-ischiensis_contig85.20124.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=6326bp|location=Sequence derived from alignment at S-ischiensis_contig85:182613..188938+ (Schizocladia ischiensis KU_0333)
ATGGTGTGTGTGTGTGTGTACGCAGGGCCGTCCTGCCAGAACCCGGAGTG
CTACACGTACAGGAAGGAGCACTGGTACTACTGCCGCGTGTGCCACCTGT
GGGAGGACGCGGAGAAGCAGATCTACCACTGCGACAAGTGCGGCATATGC
AGGGCGGGGGACCGCAACGCGTATCGCCACTGGTGAGCTTGCAGAAACAC
TTTTGTCGGGAGTCACATTCCGGAATACTTACTTAGCCGATCTACCACTG
CGACAAGTGCGGCATCTGCAGGGCGGGGGACCGCAACGCGTATCGCCACT
GGTGAGCTTGCAGAAACATTTTTGTCAGGAGTCGCACATTCCAAAAACAT
TTACTTAGCAGATCTACCACTGCGACAAGTGCGGCATCTGCAGGGCGGGG
GACCGCAACGCGTACCGCCACTGGTGAGCTCAGGGTTGGCACTTACCCCC
CAACGGGTGCCCTTTTAGGCCCTTAGTTGTAGGTAATCAGGGGTAATTAG
ACCTACAATGAAGGCTAGTTATTAGTCCCTAGTTAACATCTACTGTACGT
GCCAACCCTGGGTGAGCTTGCACTCTCCCCGAATGTTACGGCAGCGCTCG
CGCTACGTGCTGGTGCTGTAAGCTACGATACCAGGTAGTCTGTACAGTAC
TCTGTACAGTAGACTGTACAGTAGGCTACGATCTAGTAGACTGTATGTAG
AAGATTTCCGATCCAGGTCCCTCCCAAGGGAAAGTATTCCTACGAAACTT
TTCCGGGGCACGCGTCCGAAGAGTTGGTTAAACCAGTGTACGAGTAGGGA
ACGAGTGTGCGTGTACCCCCTCCTGGGCCACACAAGTCAAAGCGTGCTTT
GTACCGAGTACGTGAATCGCTTGTTGTGTCACCCTGCGCAAGCCAACCCC
CTGCCCTCTGCCCCCCCTGGCTAACTCTTGCGATGCGTGCTTTGCAGCGA
CCGGTGCAGTCTGTGCGTGCTAAAGGAGGGGGAGCACCACTGCAGCATGT
CCAGCAAGGACTTCTGCTGCCCCGTGTGCATGGAGGCATTGTTTGACTCC
CGCAAGGCCATCAGCTATGGTGAGAGAACCGTACATATTAGTGTAGTAGT
GTAGTGCACTATGTAGTGTAGATGTAGTCGTACTAGTACTAGTGTAGTGC
TTGTTTCACTCACGCAATGCCACCAGCTATGGTGAGATGGACTACTGTAC
TACTACTAGTGTACTAGTGTAGATGTACTACCTACTGTATGTGTTAGATG
TACTAGTGTAGTGTAATGTGTAGTGTAGATGTACAGTAGGTGGTACTAGT
TAGTTCCTTAGGCCTTCAAGAGCAATAATTGAGTATGCTCTCTCCTAAGT
TTTGTTCAACTCACCGAATTATTGGCCGCTTCATCTGAAGGTATCACGTC
AAAACCTTGTACCTCAGCCTTCAGAACAAATCTCAAGTTGAAGGTCAGCA
CGTTGAAGTTGAAGGTTTTTCGGAACTTGCTGGTGGCCCCGACTGTACTA
GTGTAGCGTACTCGTGTGTCTCTCGCAGGGCCATCAGCTACGGTGAGATG
GACTGTGTAGTGTAGTGTACTAGTGTGGATGTGAGATGCACTAGTATACG
AGTAGTGTACTACTGTTTGAGTACATGTGAGATGTGCCAGTGTACTAGTG
CAGTAGTGAACTCGTACTGGTGTGGTGCACTAGTGTATATGTGAGATGTG
GTGTGAACACACTCCACATCCCTTGCGCCGATATGATGTGATGTGAGTTG
AACACACTCCACATCCCTTGTGCCGATGTGATGTGATGTGAACACACTCC
ACAACGCTTGTGCCGATGTGATGTGATGTGATGTGAACACACTCCATAAC
CCTTGTGCCGATGTAACGTATGTGATGTGATGTGAACACACTCCACGTCC
CTTGTGCCGATGTCATACGATGCGATGTGATTTGAACACACTCCACATCG
CTTGTGCCAATGTGACGTATGTGATGTGATGTGATGTGCACACAATCCAC
ATCCCTTGTGCCGATGTGACGTATGTGATGTGATATGAACACACTTCACA
TCCCCTGTGCCGATGCGATGCGATGTGATGTGATGGTGATGTGGTGTGAT
GTGATGTGATCTGATGTGAACACACTCCACGTCCCTTGTGCCGATGTGAT
GTGATGCGATGTGATGTGAACACACTCCACATCGCTTGTGCAGATGCGAT
GTGATGTGATGTGAACACAGTCCACATCCCTTGTGCCGATGTGGCGTATG
TGATGTGATATGAACACACTTCCCATCCCCTGTGCCGATGCGATGCGATG
TGATGTGATGGTGATGTGGTGTGATGTGATGTGATCTGATGTGAACACAC
TCCACGTCCCTTGTGCCGATGTGATGTGATGCGATGTGATGTGAACACAC
TCCACGTCCCTTGTGCCGATGTGATGTGATGCGATGTGATGTGAACATAC
TCCACATCGCTTGTGCAGATGCGATGTGATGTGATGTGAACACAGTCCAC
ATCCCTTGTGCCGATGTGGCGTATGTGATGTGATATGAACACACTTCCCA
TCCCCTGTGCCGATGCGATGCGATGTGATGTGATGGTGATGTGGTGTGAT
GTGATGTGATCTGGTGTGAACACACTCCACGTCCCTTGTGCCGATGTGGT
GTGATGCGATGTGATGTGAACACACTCCACATCGCTTGTGCCGATGCGAT
GTGATGTGATGTGAACACAGTCCACATCCCTTGTGCCGATGTGGCGTATG
TGATGTGATATGAACACACTTCACATCCCCTGCGCCGATGCGATGCGATG
TGATGTGATGGCGATGTGGTGTGATGTGATGTTATGTGATGTGATGTGAA
CACACTCCACATCGCTTGTGCCGATGTGACGTATGTGATGTGATATGAAC
ACACTTCACATCCCCTGTGCCGATGCGATGCGATGTGATGTGAGGTGATG
TAATGTGATCTGATGTGAAACACTCCACGTCGCTTGTGCCGATGTGATGT
GATGTGATGTGAACACGCTCCACATCCCTTGTGCCGATGTAACGTATGTG
ATGTGATATGAACGCACTTCACATCCCCTGTGCCGATGCGATGCGATGTC
ATGTGATGTGATGTGATGGTGATCTGATGTGAGCACACTCCACATGGCTT
GTGCCGATGCGATGTGATGTGATGTGAACACACTCCACATCCCTTGTGCC
GATTTGATGTGATGTGATGTGATGCGATGCAGGCAAGTGCTCCCACATGT
TCCACGGCACGTGCCTGTCGCAGCTGTTGCGAACAGACTACCGCTGCCCC
CTGTGCAAGAAGTGCCTGGTGGATATGTCAGAGCAGTGGGCCATGATGGA
CCATCTCATGGAGACCGTGCAGGTATGTATATTTGCATGTGTGTGTGTGT
GTGTGTACTTATGCCGTGCTTGCCTTAGAGTAGTCCGAGAACATTTTGCT
CGAAACTCCCAAGTAGTTAAAGAAAAGGATTGTCAAAGAGCCCAAGTAGT
TAGGGCACTTCATTTCACAGTGTCCTGCCGCATGACTGACACGCACGCGC
CTGCGAGGAGGTCCCGGACGAATACCACAGTTGGCGCATATGATGTGATG
TGCAGTAGTGTGACACCATAGTCATCGCATCACATGATGTGATGTGTACT
CATATGTACTGTAGTGTACAGTAGTTGGATACCATAACCGGATATCACAG
CACAGAACATCACATCGCATTCATAGGTTGAGGCAAATGTCCACGCGCAC
ATGCACCTATGAGCAAGTCCCGGAGGAGTACCGCAGCTGGCGCGTATGAT
GTGAGGCGATGTGTACTTGGACACCATAGTCATATCCAGTGTTTCCCAAT
AAACCATTTTTCGGGGCGCAGCGCCCCAAATATCGGAATGTGGGCCAAAC
GTGCCCCCCAAAAAAGGAGCGTGGGCGCCGCAGGCGCCACAAGAAATGCA
CTTGGTGCCCCAGAAATGGAGCTGAGAAGTCCCTTTGCCTAGTGGAGCGC
CCCAAATTTCGCCCTGCGGGGCTCAAGGGCCCCCCGAGGTGTCAGATATC
GGGTTGGTGCGCCCAACCCCGATGCGCCCGCGGGCGCCCATGGGCCCCCT
GGCGCCCCGCTACTACTGGGTGTCTGGGAAACGTTGATCGTGTCACATCA
CGTCACGTTCGTACTTTGAGTGAGGTAGTGTCCCGCCGCATTCATGACGC
GCACATGCACCTGCAAGCAGGTCCCGGAGGAGTACCGTAGCTGGCGCGTG
CGCATCTTCTGCAACGAGTGCGAGACGCTTAGCAATGTCAACTTCACTGT
GGAGGCGTACAAGTGCCCCTCTTGTGGCGGCTACAACGCCGTACCTCAGG
GACGCATCGACCCCGGATGCGGGCAGGTGGGTTTGTTGGCACTTGTTTTT
TTCGTTCTCTTTTCCGACGCCCCCGACTGCGTAGGTCGATTTTATTCCAC
TACTTGGAAGCAGTATAATTTGTATTAAACTGCTCCGTCTCGACCGAGGC
GCGTGGTCTATGGTCTCGGGGACTACGGCAAGCACAACGTGAGTAGATAT
ATTGACAGGAACAGCACAGGGCTCATGTGTAGTAGTGTGGTACAGTACTT
GCTGTAGTCCAGTAGGCCCAAATTCAATACGTACGGCGATGATGATCATT
GTTATGATTGTTTGGGGGGGGGGGGGCTATTCGCCGAACGCTTGAACGCT
GGCCGGCCCGCAGTTTTGTGACGCGCCGTTTGAAGAGCGCCGAGTTCACG
AGAGCACTCATTCTTAGCACCACTAGGTCCCCTCGAAATCAGGGGGACCC
GACGAAAAAATCGGCGACCACAAGCAAAAAAACAATATGGTGGACGGGAG
GCGATGATTTTCTCAGCGGCACGTATCGGGCTTCCCAACGCGTTTTTGAT
ATCCCGATGCTTTTAGTTAGTTCTGGGCCCCAACACGGAGAAGCCCTTCC
TTCACCCACCTTCACTAGCAAGGCAAATACTCGTACATGGCGAAAGCTGG
GGGAAAGGGAGAAGCGAGAAGGGGGCAGTGGGCAACAGAGATCTGGAATT
GCTCTATGCAGCGTGAGGTACCAGCCACGTTGGTTGCTTGGCCAGCTAAG
GCTATGCTTCCGGGCACCTCACAAAGCACTTGCTGTAAGTCATGTCAGTT
GTACTGCCAAGTATGTAGTGCTATAAAGTACTTGGAAGTACTGAAGTACA
GTATTCACAAAGACCTTGGCATAGACCTCTCCATTTTGAGGCGCTCTTTG
TTCAGCCGCAAACGTCCCGAAACGATGCTCGTTCTTGAGCCCGCTTGCCA
GCGCCGCTGGGTCCCGTTTGGTCTGTGAGGTCACAGTCTCCAAGGCTGCA
GACTTTACAGGGCCCGGCCTGTACCTTTGCCCCGGGGCGCTGATGCCCCA
AGAGATCTGATACACAATGGTGAAAATCCATCAAATAGGTCGTACTTCGA
AGTATTTATTTACAGTAGAAGCAACGAAGCCCTGTAATGCAATATGGTGG
TGAACACGCCAAAAAATTCGTCGCCTCCCCTGCATGCCGACACGAAAGTT
TTGTTCCACACCCTAGTTTTTGGGGTCCTGTTTCTGGTCATTCCCGCGTT
GGTTGGTTAAGGTCGAGGGCGACGCTGGATAAAGTCATCGTACCGCGAAA
ATCTTGGCGGGTTTCACAGGCCCGAACGCAAACCCAACGAAAAAAATGGC
GAGCGTTCCTAATGGTGTTGAATGGGATAGCCACTATTGCGAGAACACTG
AACCTCACACACGTGCTGTTGTACCTCGTTGCAACTTTTGTGTGGAAAGA
CAAGAAGCGGGTGGAAAATAGAGGTGATCCTACTTTTGCGAGTTCTGGGC
CCCAAGCGGTTACCATTTTTGAATTATTGGGATGGCACGCGAGTTTTTGT
TAATCAGCATTGAGTTCACACGGGAATAAACGCCTTTGACAGGTGGGCGA
CAGAGCCGACACGGCGACCGAACCCGGCGGCCACGCTACTGCCCTCGCCA
CCGCTGGAGACGGAGACGGAGACGGAAATGGGCCCGGCAGGGACGTGGGC
GCCCCGGGCAGGGAGACGACCAGCGAGACCCTCGCCGACGGCCACCTCCG
CAGCGGCAATGCCGCCCAAGGCGCCTCTACAAGTACCAGTACCAGCAGCG
GCGGCAGCAGCGGAACCTCTGGGGACTCGGAGTTGGATGCCAGCGGTGCC
AGCAGCGGGAGCAGCAGTTCCGGCAGCCAGCCCGGCACCGGCAGCGGCAG
CGGCAGCGGCGGCGCCACGGATGCCTCCGACCCGGACACGGACAGTAGCG
TCGCCGGCAGCCCGCAGTCGACAGAG
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Coding sequence (CDS) from alignment at S-ischiensis_contig85:182613..188938+

>mRNA_S-ischiensis_contig85.20124.1 ID=mRNA_S-ischiensis_contig85.20124.1|Name=mRNA_S-ischiensis_contig85.20124.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1968bp|location=Sequence derived from alignment at S-ischiensis_contig85:182613..188938+ (Schizocladia ischiensis KU_0333)
ATGGTGTGTGTGTGTGTGTACGCAGGGCCGTCCTGCCAGAACCCGGAGTG
CTACACGTACAGGAAGGAGCACTGGTACTACTGCCGCGTGTGCCACCTGT
GGGAGGACGCGGAGAAGCAGATCTACCACTGCGACAAGTGCGGCATATGC
AGGGCGGGGGACCGCAACGCGTATCGCCACTGATGGTGTGTGTGTGTGTG
TACGCAGGGCCGTCCTGCCAGAACCCGGAGTGCTACACGTACAGGAAGGA
GCACTGGTACTACTGCCGCGTGTGCCACCTGTGGGAGGACGCGGAGAAGC
AGATCTACCACTGCGACAAGTGCGGCATATGCAGGGCGGGGGACCGCAAC
GCGTATCGCCACTGCGACCGGTGCAGTCTGTGCGTGCTAAAGGAGGGGGA
GCACCACTGCAGCATGTCCAGCAAGGACTTCTGCTGCCCCGTGTGCATGG
AGGCATTGTTTGACTCCCGCAAGGCCATCAGCTATGCGACCGGTGCAGTC
TGTGCGTGCTAAAGGAGGGGGAGCACCACTGCAGCATGTCCAGCAAGGAC
TTCTGCTGCCCCGTGTGCATGGAGGCATTGTTTGACTCCCGCAAGGCCAT
CAGCTATGGCAAGTGCTCCCACATGTTCCACGGCACGTGCCTGTCGCAGC
TGTTGCGAACAGACTACCGCTGCCCCCTGTGCAAGAAGTGCCTGGTGGAT
ATGTCAGAGCAGTGGGCCATGATGGACCATCTCATGGAGACCGTGCAGGC
AAGTGCTCCCACATGTTCCACGGCACGTGCCTGTCGCAGCTGTTGCGAAC
AGACTACCGCTGCCCCCTGTGCAAGAAGTGCCTGGTGGATATGTCAGAGC
AGTGGGCCATGATGGACCATCTCATGGAGACCGTGCAGGTCCCGGAGGAG
TACCGTAGCTGGCGCGTGCGCATCTTCTGCAACGAGTGCGAGACGCTTAG
CAATGTCAACTTCACTGTGGAGGCGTACAAGTGCCCCTCTTGTGGCGGCT
ACAACGCCGTACCTCAGGGACGCATCGACCCCGGATGCGGGCAGGTCCCG
GAGGAGTACCGTAGCTGGCGCGTGCGCATCTTCTGCAACGAGTGCGAGAC
GCTTAGCAATGTCAACTTCACTGTGGAGGCGTACAAGTGCCCCTCTTGTG
GCGGCTACAACGCCGTACCTCAGGGACGCATCGACCCCGGATGCGGGCAG
GTGGGCGACAGAGCCGACACGGCGACCGAACCCGGCGGCCACGCTACTGC
CCTCGCCACCGCTGGAGACGGAGACGGAGACGGAAATGGGCCCGGCAGGG
ACGTGGGCGCCCCGGGCAGGGAGACGACCAGCGAGACCCTCGCCGACGGC
CACCTCCGCAGCGGCAATGCCGCCCAAGGCGCCTCTACAAGTACCAGTAC
CAGCAGCGGCGGCAGCAGCGGAACCTCTGGGGACTCGGAGTTGGATGCCA
GCGGTGCCAGCAGCGGGAGCAGCAGTTCCGGCAGCCAGCCCGGCACCGGC
AGCGGCAGCGGCAGCGGCGGCGCCACGGATGCCTCCGACCCGGACACGGA
CAGTAGCGTCGCCGGCAGCCCGCAGTCGACAGAGGTGGGCGACAGAGCCG
ACACGGCGACCGAACCCGGCGGCCACGCTACTGCCCTCGCCACCGCTGGA
GACGGAGACGGAGACGGAAATGGGCCCGGCAGGGACGTGGGCGCCCCGGG
CAGGGAGACGACCAGCGAGACCCTCGCCGACGGCCACCTCCGCAGCGGCA
ATGCCGCCCAAGGCGCCTCTACAAGTACCAGTACCAGCAGCGGCGGCAGC
AGCGGAACCTCTGGGGACTCGGAGTTGGATGCCAGCGGTGCCAGCAGCGG
GAGCAGCAGTTCCGGCAGCCAGCCCGGCACCGGCAGCGGCAGCGGCAGCG
GCGGCGCCACGGATGCCTCCGACCCGGACACGGACAGTAGCGTCGCCGGC
AGCCCGCAGTCGACAGAG
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