mRNA_S-ischiensis_contig85.20122.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig85.20122.1
Unique NamemRNA_S-ischiensis_contig85.20122.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
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BLAST of mRNA_S-ischiensis_contig85.20122.1 vs. uniprot
Match: A0A8D1A7H5_PIG (40S ribosomal protein S7 n=1 Tax=Sus scrofa TaxID=9823 RepID=A0A8D1A7H5_PIG)

HSP 1 Score: 314 bits (804), Expect = 3.540e-107
Identity = 158/191 (82.72%), Postives = 178/191 (93.19%), Query Frame = 1 
Query:    1 MFTGATKIRKPAGQEPDEFEQSVAQELFNVEMSAVEIKADLRDLYIISAKQVDVGGNKKAVIISVPYKLLRAYHKIQARLVRELEKKFSGRHVVIIAHRTILGKSYARSTKTKGPRPYSRTLTAVQEAILEDLVYPTEIVGKRTRCRMDGTKLLKVQLDPKDQVNVETKLDTFSSVYKKMTSKDVVFEFPV 573
            MFTGA KI KP GQE DEFEQ+VAQELFN+EMSA +IK+++RDLYI  AKQVDVGG KKA+II VPY+LLR+YHKIQ RLVRELEKKFSGRHVVIIA RTILGKSYARSTKT+G RP SRTLTAVQ+A+LEDLV+PTEIVGKRTRC++DG+K+LKVQLDPKDQVNVETKLDTFSSVYKK+T+KDVVFEFP+
Sbjct:    1 MFTGAIKIVKPEGQEADEFEQTVAQELFNLEMSAADIKSEIRDLYITGAKQVDVGGGKKAIIIFVPYRLLRSYHKIQTRLVRELEKKFSGRHVVIIATRTILGKSYARSTKTQGTRPRSRTLTAVQDAMLEDLVFPTEIVGKRTRCKVDGSKILKVQLDPKDQVNVETKLDTFSSVYKKITNKDVVFEFPL 191
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BLAST of mRNA_S-ischiensis_contig85.20122.1 vs. uniprot
Match: D7G463_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G463_ECTSI)

HSP 1 Score: 326 bits (836), Expect = 3.470e-105
Identity = 166/194 (85.57%), Postives = 181/194 (93.30%), Query Frame = 1 
Query:    1 MFTGATKIRKPAGQEPDEFEQSVAQELFNVEMSAVEIKADLRDLYIISAKQVDVGGNKKAVIISVPYKLLRAYHKIQARLVRELEKKFSGRHVVIIAHRTILGKSYARSTKTKGPRPYSRTLTAVQEAILEDLVYPTEIVGKRTRCRMDGTKLLKVQLDPKDQVNVETKLDTFSSVYKKMTSKDVVFEFPVQEP 582
            MFTGATKI KP GQE DEFEQ VAQELFN+EMSA +IKAD+RDLYI  AKQVDVGG KKA+II VPY+LLR+YHKIQ RLVRELEKKFSGRHVVIIA RTILGKSYARSTKT+G RP SRTLTAVQ+A+LEDLV+PTEIVGKRTRC++DG+KLLKVQLDPKDQVNVETKLDTFSSVYKK+T+KDVVFEFPVQEP
Sbjct:  519 MFTGATKIVKPEGQEADEFEQQVAQELFNLEMSAADIKADIRDLYITGAKQVDVGGGKKAIIIFVPYRLLRSYHKIQTRLVRELEKKFSGRHVVIIATRTILGKSYARSTKTQGIRPRSRTLTAVQDAMLEDLVFPTEIVGKRTRCKIDGSKLLKVQLDPKDQVNVETKLDTFSSVYKKITNKDVVFEFPVQEP 712
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BLAST of mRNA_S-ischiensis_contig85.20122.1 vs. uniprot
Match: A0A7S2XZE0_9STRA (40S ribosomal protein S7 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZE0_9STRA)

HSP 1 Score: 306 bits (785), Expect = 6.840e-104
Identity = 154/192 (80.21%), Postives = 175/192 (91.15%), Query Frame = 1 
Query:    4 FTGATKIRKPAGQEPDEFEQSVAQELFNVEMSAVEIKADLRDLYIISAKQVDVGGNKKAVIISVPYKLLRAYHKIQARLVRELEKKFSGRHVVIIAHRTILGKSYARSTKTKGPRPYSRTLTAVQEAILEDLVYPTEIVGKRTRCRMDGTKLLKVQLDPKDQVNVETKLDTFSSVYKKMTSKDVVFEFPVQE 579
            FTGA KI KPAGQE D+FE+SVAQEL+N+EMSA E+KA+LRDLYI +AK+V+VGG KKA+II VPY  LRA+HKIQ RLVRELEKKFSGRHVV+IA RTILGKSY RSTKTKGPRP SRTLT VQE ILEDLVYPTEIVGKRT+C++DG+K+LKV LDPKDQVNVETKLDTFS VYKK+T+KDVVF+FP+QE
Sbjct:   25 FTGAKKIVKPAGQEIDDFEKSVAQELYNLEMSAAELKAELRDLYITAAKEVEVGGGKKAIIIVVPYVKLRAFHKIQLRLVRELEKKFSGRHVVVIAQRTILGKSYTRSTKTKGPRPRSRTLTHVQEQILEDLVYPTEIVGKRTKCKLDGSKILKVLLDPKDQVNVETKLDTFSFVYKKLTNKDVVFQFPIQE 216
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BLAST of mRNA_S-ischiensis_contig85.20122.1 vs. uniprot
Match: A0A836C8B1_9STRA (40S ribosomal protein S7 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8B1_9STRA)

HSP 1 Score: 300 bits (769), Expect = 7.610e-102
Identity = 152/186 (81.72%), Postives = 172/186 (92.47%), Query Frame = 1 
Query:   22 IRKPAGQEPDEFEQSVAQELFNVEMSAVEIKADLRDLYIISAKQVDVGGNKKAVIISVPYKLLRAYHKIQARLVRELEKKFSGRHVVIIAHRTILGKSYARSTKTKGPRPYSRTLTAVQEAILEDLVYPTEIVGKRTRCRMDGTKLLKVQLDPKDQVNVETKLDTFSSVYKKMTSKDVVFEFPVQE 579
            I KP GQ  DEFEQ+VAQEL+N++MSA EIKADL+DLYI SAKQV++ G KKA+I+ VPY+LLRA+HKIQARLV ELEKKFSGRHVVIIA RTILGK++AR++KTKGPRP SRTLTAVQ+AILEDLVYPTEIVGKRTRCR+DGTKLLKV LDPKDQVNVETKLDTFS VYKK+T+K+VVFEFPVQE
Sbjct:    6 IVKPEGQAADEFEQTVAQELYNLQMSAAEIKADLKDLYITSAKQVELAGGKKAIILFVPYRLLRAFHKIQARLVPELEKKFSGRHVVIIAQRTILGKNFARNSKTKGPRPRSRTLTAVQDAILEDLVYPTEIVGKRTRCRVDGTKLLKVHLDPKDQVNVETKLDTFSYVYKKLTNKEVVFEFPVQE 191
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BLAST of mRNA_S-ischiensis_contig85.20122.1 vs. uniprot
Match: A0A6T5NXM7_HETAK (40S ribosomal protein S7 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5NXM7_HETAK)

HSP 1 Score: 300 bits (768), Expect = 2.840e-101
Identity = 155/193 (80.31%), Postives = 171/193 (88.60%), Query Frame = 1 
Query:    1 MFTGATKIRKPAGQEPDEFEQSVAQELFNVEMSAVEIKADLRDLYIISAKQVDVGGNKKAVIISVPYKLLRAYHKIQARLVRELEKKFSGRHVVIIAHRTILGKSYARSTKTKGPRPYSRTLTAVQEAILEDLVYPTEIVGKRTRCRMDGTKLLKVQLDPKDQVNVETKLDTFSSVYKKMTSKDVVFEFPVQE 579
            M  G+ KI KP GQEPDEFE  VAQELFN+EMSAVEIKADLRDLYI +AK+VDVG  KKA+I+ VPYKLLR +++IQ RLVRELEKKFSGRHVVIIA RTILGKSYARSTKTKG RP SRTLTAVQ++ILEDLVYPTEIVGKRTRC + G KLLKV LDPKDQVNVETKLDTF+ VYKK+T+KDV F+FPVQE
Sbjct:   26 MSLGSKKIVKPPGQEPDEFEAQVAQELFNLEMSAVEIKADLRDLYITAAKEVDVGPGKKAIIVVVPYKLLRKFNRIQIRLVRELEKKFSGRHVVIIAQRTILGKSYARSTKTKGLRPRSRTLTAVQDSILEDLVYPTEIVGKRTRCAVSGEKLLKVYLDPKDQVNVETKLDTFAYVYKKLTNKDVSFQFPVQE 218
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BLAST of mRNA_S-ischiensis_contig85.20122.1 vs. uniprot
Match: A0A662XBL9_9STRA (40S ribosomal protein S7 n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XBL9_9STRA)

HSP 1 Score: 288 bits (738), Expect = 4.440e-97
Identity = 144/193 (74.61%), Postives = 169/193 (87.56%), Query Frame = 1 
Query:    1 MFTGATKIRKPAGQEPDEFEQSVAQELFNVEMSAVEIKADLRDLYIISAKQVDVGGNKKAVIISVPYKLLRAYHKIQARLVRELEKKFSGRHVVIIAHRTILGKSYARSTKTKGPRPYSRTLTAVQEAILEDLVYPTEIVGKRTRCRMDGTKLLKVQLDPKDQVNVETKLDTFSSVYKKMTSKDVVFEFPVQE 579
            MFTG +KI KP GQ PDEFEQ VAQEL+N+E+SA EIK DL+DLYI +AKQVD+   +KA++I VP++L  ++ KIQARLVRELEKKFSGRHV+IIA RTILGK +AR+ KT GPRP SRTLTAVQEAIL+DLVYPTEIVGKRTR R+D +KLLKV LDPKDQVNVETKLDTF++VYKK+T+KDVVFEFPV +
Sbjct:    1 MFTGRSKIVKPEGQTPDEFEQQVAQELYNLELSAAEIKNDLKDLYITAAKQVDISSGRKAIVIFVPFRLHASFKKIQARLVRELEKKFSGRHVIIIAQRTILGKGFARANKTSGPRPRSRTLTAVQEAILDDLVYPTEIVGKRTRVRLDSSKLLKVFLDPKDQVNVETKLDTFATVYKKLTNKDVVFEFPVHQ 193
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BLAST of mRNA_S-ischiensis_contig85.20122.1 vs. uniprot
Match: A0A2D4C6D5_PYTIN (40S ribosomal protein S7 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C6D5_PYTIN)

HSP 1 Score: 287 bits (735), Expect = 1.270e-96
Identity = 143/193 (74.09%), Postives = 167/193 (86.53%), Query Frame = 1 
Query:    1 MFTGATKIRKPAGQEPDEFEQSVAQELFNVEMSAVEIKADLRDLYIISAKQVDVGGNKKAVIISVPYKLLRAYHKIQARLVRELEKKFSGRHVVIIAHRTILGKSYARSTKTKGPRPYSRTLTAVQEAILEDLVYPTEIVGKRTRCRMDGTKLLKVQLDPKDQVNVETKLDTFSSVYKKMTSKDVVFEFPVQE 579
            MFTGA KI+KP GQ  DEFEQ VAQELFN+E SA E+K +L+DLYI +AKQVDV   +KA++I VPY+L +A++KIQARL RELEKKFSGRHVV I  RTILGK +AR+ K  GPRP SRTLTAVQEAIL+D+VYPTEIVGKRTR R+DG+KLLKV LDPKDQVNVETKLDTF++VYKK+T+KDVVFEFPV +
Sbjct:    1 MFTGAAKIKKPEGQTADEFEQQVAQELFNLEASAAELKNELKDLYITAAKQVDVASGRKAIVIFVPYRLHKAFNKIQARLTRELEKKFSGRHVVFITQRTILGKGFARANKATGPRPRSRTLTAVQEAILDDIVYPTEIVGKRTRVRLDGSKLLKVYLDPKDQVNVETKLDTFATVYKKLTNKDVVFEFPVHQ 193
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BLAST of mRNA_S-ischiensis_contig85.20122.1 vs. uniprot
Match: K3XAM7_GLOUD (40S ribosomal protein S7 n=3 Tax=Pythiaceae TaxID=4782 RepID=K3XAM7_GLOUD)

HSP 1 Score: 277 bits (709), Expect = 1.040e-92
Identity = 143/189 (75.66%), Postives = 162/189 (85.71%), Query Frame = 1 
Query:   13 ATKIRKPAGQEPDEFEQSVAQELFNVEMSAVEIKADLRDLYIISAKQVDVGGNKKAVIISVPYKLLRAYHKIQARLVRELEKKFSGRHVVIIAHRTILGKSYARSTKTKGPRPYSRTLTAVQEAILEDLVYPTEIVGKRTRCRMDGTKLLKVQLDPKDQVNVETKLDTFSSVYKKMTSKDVVFEFPVQE 579
            + KI KP GQ  DEFE  VAQEL N++ SA EIK DL+DLYI +AKQVDV   +KA++I VPY+L  A+ KIQARLVRELEKKFSGRHVVIIA RTILGK Y+RS KT GPRP SRTL AVQEAIL+DLVYPTEIVGKRTR R+DG+KLLKV LDPKDQVNVETKLDTF++VYKK+T+KDVVFEFPVQ+
Sbjct:    2 SAKIVKPEGQTADEFELQVAQELANLQQSAAEIKNDLKDLYITAAKQVDVASGRKAIVIFVPYRLHSAFKKIQARLVRELEKKFSGRHVVIIAQRTILGKGYSRSNKTNGPRPRSRTLVAVQEAILDDLVYPTEIVGKRTRVRLDGSKLLKVFLDPKDQVNVETKLDTFATVYKKLTNKDVVFEFPVQQ 190
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BLAST of mRNA_S-ischiensis_contig85.20122.1 vs. uniprot
Match: H3G9W8_PHYRM (40S ribosomal protein S7 n=21 Tax=Peronosporaceae TaxID=4777 RepID=H3G9W8_PHYRM)

HSP 1 Score: 276 bits (707), Expect = 2.030e-92
Identity = 140/189 (74.07%), Postives = 162/189 (85.71%), Query Frame = 1 
Query:   13 ATKIRKPAGQEPDEFEQSVAQELFNVEMSAVEIKADLRDLYIISAKQVDVGGNKKAVIISVPYKLLRAYHKIQARLVRELEKKFSGRHVVIIAHRTILGKSYARSTKTKGPRPYSRTLTAVQEAILEDLVYPTEIVGKRTRCRMDGTKLLKVQLDPKDQVNVETKLDTFSSVYKKMTSKDVVFEFPVQE 579
            A+KI KP GQ  DEFE  VAQELFN+E SA EIK DL+DLYI +AKQVD+   +KA++I VP++L  ++ KIQARLVRELEKKFSGRHVVIIA RTILGK Y+R+    GPRP SRTLT VQE IL+DLV+PTEIVGKRTRCR+DG+KLLKV LDPKDQVNVETKLDTF++VYKK+T+KDVVFEFPVQE
Sbjct:    2 ASKIVKPEGQTADEFELQVAQELFNLEQSAAEIKTDLKDLYITAAKQVDISSGRKAIVIFVPFRLHASFKKIQARLVRELEKKFSGRHVVIIAQRTILGKGYSRANHGAGPRPRSRTLTHVQEQILDDLVFPTEIVGKRTRCRLDGSKLLKVHLDPKDQVNVETKLDTFATVYKKLTNKDVVFEFPVQE 190
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BLAST of mRNA_S-ischiensis_contig85.20122.1 vs. uniprot
Match: A0A7S2C777_9STRA (40S ribosomal protein S7 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C777_9STRA)

HSP 1 Score: 275 bits (703), Expect = 1.090e-91
Identity = 141/196 (71.94%), Postives = 167/196 (85.20%), Query Frame = 1 
Query:    1 MFTGATKIRKPAGQEPDEFEQSVAQELFNVEMSAVEIKADLRDLYIISAKQVDVG---GNKKAVIISVPYKLLRAYHKIQARLVRELEKKFSGRHVVIIAHRTILGKSYARSTKTKGPRPYSRTLTAVQEAILEDLVYPTEIVGKRTRCRMDGTKLLKVQLDPKDQVNVETKLDTFSSVYKKMTSKDVVFEFPVQE 579
            MFTG  KI KP GQE  EFE +VAQELFN+EMSA EIK++LRDLYI +AK+V+VG     K+A+II VP+KLL+ +HKIQARLVRELEKKFSG+HV I+A RTILGKSY+RSTKTKGPRP SRTLTAVQ+AILEDLV+PTEIVGKRTRC++DGTK L V LD KD VNVETKL+TF+ VYK +T+K+V F FP ++
Sbjct:    1 MFTGFKKIVKPEGQESTEFENTVAQELFNLEMSAAEIKSELRDLYITAAKEVNVGPASAGKQAIIIFVPFKLLKQFHKIQARLVRELEKKFSGKHVTIVAQRTILGKSYSRSTKTKGPRPRSRTLTAVQDAILEDLVFPTEIVGKRTRCKLDGTKQLNVFLDAKDIVNVETKLETFADVYKHLTNKEVEFAFPTEQ 196
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig85.20122.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8D1A7H5_PIG3.540e-10782.7240S ribosomal protein S7 n=1 Tax=Sus scrofa TaxID=... [more]
D7G463_ECTSI3.470e-10585.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2XZE0_9STRA6.840e-10480.2140S ribosomal protein S7 n=1 Tax=Fibrocapsa japoni... [more]
A0A836C8B1_9STRA7.610e-10281.7240S ribosomal protein S7 n=1 Tax=Tribonema minus T... [more]
A0A6T5NXM7_HETAK2.840e-10180.3140S ribosomal protein S7 n=1 Tax=Heterosigma akash... [more]
A0A662XBL9_9STRA4.440e-9774.6140S ribosomal protein S7 n=2 Tax=Nothophytophthora... [more]
A0A2D4C6D5_PYTIN1.270e-9674.0940S ribosomal protein S7 n=1 Tax=Pythium insidiosu... [more]
K3XAM7_GLOUD1.040e-9275.6640S ribosomal protein S7 n=3 Tax=Pythiaceae TaxID=... [more]
H3G9W8_PHYRM2.030e-9274.0740S ribosomal protein S7 n=21 Tax=Peronosporaceae ... [more]
A0A7S2C777_9STRA1.090e-9171.9440S ribosomal protein S7 n=1 Tax=Dictyocha speculu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig85contigS-ischiensis_contig85:170645..176811 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score327.4
Seed ortholog evalue4.5e-87
Seed eggNOG ortholog2880.D7G463
Preferred nameRPS7
KEGG koko:K02993,ko:K11592
KEGG Pathwayko03010,ko05206,map03010,map05206
KEGG ModuleM00177
GOsGO:0000184,GO:0000956,GO:0001838,GO:0001841,GO:0001843,GO:0002009,GO:0002181,GO:0002376,GO:0002520,GO:0003674,GO:0003676,GO:0003723,GO:0003727,GO:0003729,GO:0003730,GO:0003735,GO:0004857,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006401,GO:0006402,GO:0006412,GO:0006413,GO:0006518,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0007275,GO:0007399,GO:0008104,GO:0008150,GO:0008152,GO:0008187,GO:0008266,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009653,GO:0009790,GO:0009792,GO:0009888,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009966,GO:0009967,GO:0009987,GO:0010467,GO:0010468,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010646,GO:0010647,GO:0010941,GO:0010942,GO:0014020,GO:0015031,GO:0015833,GO:0015935,GO:0016070,GO:0016071,GO:0016072,GO:0016331,GO:0019222,GO:0019439,GO:0019538,GO:0019899,GO:0019900,GO:0019901,GO:0021915,GO:0022613,GO:0022626,GO:0022627,GO:0023051,GO:0023056,GO:0030097,GO:0030154,GO:0030162,GO:0030234,GO:0030684,GO:0030686,GO:0031323,GO:0031324,GO:0031329,GO:0031330,GO:0031396,GO:0031397,GO:0031399,GO:0031400,GO:0031647,GO:0031974,GO:0031981,GO:0032040,GO:0032268,GO:0032269,GO:0032501,GO:0032502,GO:0032991,GO:0033036,GO:0033365,GO:0034470,GO:0034613,GO:0034641,GO:0034645,GO:0034655,GO:0034660,GO:0035148,GO:0035239,GO:0035295,GO:0042176,GO:0042177,GO:0042254,GO:0042274,GO:0042886,GO:0042981,GO:0043009,GO:0043043,GO:0043065,GO:0043067,GO:0043068,GO:0043086,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043603,GO:0043604,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045047,GO:0045184,GO:0045861,GO:0046483,GO:0046700,GO:0046907,GO:0048027,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048583,GO:0048584,GO:0048598,GO:0048646,GO:0048729,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0050821,GO:0051171,GO:0051172,GO:0051179,GO:0051234,GO:0051246,GO:0051248,GO:0051338,GO:0051348,GO:0051438,GO:0051444,GO:0051641,GO:0051649,GO:0051726,GO:0055105,GO:0055106,GO:0060255,GO:0060429,GO:0060562,GO:0060606,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070727,GO:0070972,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072175,GO:0072594,GO:0072599,GO:0072657,GO:0080090,GO:0090150,GO:0090304,GO:0097159,GO:0098772,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901796,GO:1901798,GO:1902253,GO:1902255,GO:1902531,GO:1902533,GO:1903050,GO:1903051,GO:1903320,GO:1903321,GO:1903362,GO:1903363,GO:1904666,GO:1904667,GO:1990904,GO:1990948,GO:2000058,GO:2000059,GO:2001233,GO:2001235,GO:2001242,GO:2001244
EggNOG free text desc.structural constituent of ribosome
EggNOG OGsKOG3320@1,KOG3320@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko01000,ko03011,ko03036
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-02_001435.1
Exons5
Model size585
Cds size585
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig85.20122.1prot_S-ischiensis_contig85.20122.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig85 170645..176811 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817341.3705194-CDS-S-ischiensis_contig85:170644..1707401622817341.3705194-CDS-S-ischiensis_contig85:170644..170740Schizocladia ischiensis KU_0333CDSS-ischiensis_contig85 170645..170740 -
1695741040.8843317-CDS-S-ischiensis_contig85:170644..1707401695741040.8843317-CDS-S-ischiensis_contig85:170644..170740Schizocladia ischiensis KU_0333CDSS-ischiensis_contig85 170645..170740 -
1622817341.3819466-CDS-S-ischiensis_contig85:172280..1723761622817341.3819466-CDS-S-ischiensis_contig85:172280..172376Schizocladia ischiensis KU_0333CDSS-ischiensis_contig85 172281..172376 -
1695741040.90061-CDS-S-ischiensis_contig85:172280..1723761695741040.90061-CDS-S-ischiensis_contig85:172280..172376Schizocladia ischiensis KU_0333CDSS-ischiensis_contig85 172281..172376 -
1622817341.3947313-CDS-S-ischiensis_contig85:173494..1736211622817341.3947313-CDS-S-ischiensis_contig85:173494..173621Schizocladia ischiensis KU_0333CDSS-ischiensis_contig85 173495..173621 -
1695741040.910918-CDS-S-ischiensis_contig85:173494..1736211695741040.910918-CDS-S-ischiensis_contig85:173494..173621Schizocladia ischiensis KU_0333CDSS-ischiensis_contig85 173495..173621 -
1622817341.4114027-CDS-S-ischiensis_contig85:174376..1745491622817341.4114027-CDS-S-ischiensis_contig85:174376..174549Schizocladia ischiensis KU_0333CDSS-ischiensis_contig85 174377..174549 -
1695741040.9243941-CDS-S-ischiensis_contig85:174376..1745491695741040.9243941-CDS-S-ischiensis_contig85:174376..174549Schizocladia ischiensis KU_0333CDSS-ischiensis_contig85 174377..174549 -
1622817341.4263194-CDS-S-ischiensis_contig85:176718..1768111622817341.4263194-CDS-S-ischiensis_contig85:176718..176811Schizocladia ischiensis KU_0333CDSS-ischiensis_contig85 176719..176811 -
1695741040.934121-CDS-S-ischiensis_contig85:176718..1768111695741040.934121-CDS-S-ischiensis_contig85:176718..176811Schizocladia ischiensis KU_0333CDSS-ischiensis_contig85 176719..176811 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig85.20122.1

>prot_S-ischiensis_contig85.20122.1 ID=prot_S-ischiensis_contig85.20122.1|Name=mRNA_S-ischiensis_contig85.20122.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=195bp
MFTGATKIRKPAGQEPDEFEQSVAQELFNVEMSAVEIKADLRDLYIISAK
QVDVGGNKKAVIISVPYKLLRAYHKIQARLVRELEKKFSGRHVVIIAHRT
ILGKSYARSTKTKGPRPYSRTLTAVQEAILEDLVYPTEIVGKRTRCRMDG
TKLLKVQLDPKDQVNVETKLDTFSSVYKKMTSKDVVFEFPVQEP*
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mRNA from alignment at S-ischiensis_contig85:170645..176811-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig85.20122.1 ID=mRNA_S-ischiensis_contig85.20122.1|Name=mRNA_S-ischiensis_contig85.20122.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=6167bp|location=Sequence derived from alignment at S-ischiensis_contig85:170645..176811- (Schizocladia ischiensis KU_0333)
ATGTTCACGGGCGCAACGAAGATCCGCAAGCCTGCGGGCCAGGAGCCGGA
TGAGTTTGAGCAGTCAGTTGCCCAGGAGCTCTTCAATGTGGAGGTGTGTC
ATGGTAGTGTGGTCAGCAGCGGGCCCTCTTTTGCCTTTGCGTGGCTTTGA
CGAGGCTAGAAGGTTACAGCTGGGTCGGCTTGGCCCCCCCTGCCCCCCCA
CCCCCTCCCTCGAGCACTCTTCCCGATGGCTGCGTGCGAGGCCGTTCCAT
ACATGGGCTTGCCGTACTTGTCTCGCGACGTGAGAGTTAAAGTTGCGTTC
TTGGTCGATAGCCCACATGAACCTCGGTTTTGGCCTCCGATAGGAGCCAG
GGTTCGAGGGAGGGAGTAGGCGGAGGTGTGGCCACTCCCATACCTCCCCG
TCCCAAACTCGCGAGGGTCAGGGCGGAGGGGGGGGTGCTCCCTGCTAGGG
CGGTCTTACGGGACCTGTTTTGCGTGTACTGCCCGCTGTGCCTACTCGTA
CTACTGTATTACTTGTACTCGTACTGGTAATTGTACTTGACTTGTGCACT
GCTGTGAGCTGTGTGTGTCGTGTAGCCAACCCAATATTTCTGATTTCTCA
AACGCATCCTTGATTATATCTGTTGTCACCAACGGCTCAGTATTCCGCAC
GCACTCTCAATGAGCACAATCGATTTCACGCAGGTGAGACTGTAAGTTAA
GTTTTGTGATGTGATGTGAGGGGAGGTGAGGTTTACTCTCATGTACGGTA
GTTTGACATCACGTCGCATCACATTCTACATCGCATCACATTCTAGCTGA
TGTTATGTGATGCGATGTGATGTGAACATATATTTACTCTCATGTCCTGT
AGTTTTGAGGTCTCTAGTGACATGGCGTGGCCCGCTCCTCGCCCCGTGTT
GTTCCTGTTAATACTTTCTGCCGAAGAATACTGGCGGTCATTACCAACTA
CAGTACTGCAGGGAGGGGGTTCGGGCCTGTAGTGCCCAAGCCTTGCAGGC
CGGCCGGCCGGCGGCACGTCCTTCCGTCCGTCCTGTGGACTCCGATACCT
GGCATTTGTCACGCATTCGGGGCCTACTGAACTCTTTCCTCCCTGGGCCC
GTTTATCATAGAGTTTTAGTGGGCAAGTCCAATTTCGCAGGGGTAAAAGG
GTCAACTCCTGCACTCGCTTGATCATGTCATGCAGGTGACGATCAACACT
CGTCGGAGTGCACGCGATTGATTATTATGTACCTCCAAGTGTTTGGTGCC
GATTGACCCTCCCGCACCACGAGTATCATGCGTGAGAAGGGATAACTCTT
CCTTCTGGTGAGGTGATTCAAAGAGTTGAATTGTAGCGAGATACAATCGC
ACGTGTGTTAGTTTGAGTTTTCTCGTGTTGGTGGTTGCAGGCATCACATT
TAAGAATTCAGTGTTGTCGTATTAGTGGTTTTCTGGCAAGGTGCCGATTT
TGGTGCAATTTGATGTGTATGTGGTGGCGCACTAGAGTAGATTAGTGTGC
GTATCACATCGCGTCACACCGTGGAACAAATCGAGTGTCCCAACGAGAGA
AAGAAGGGCTTCCTTCTCGTTAGGTCTCCAGTTTGATGTTTTGCCAGGTG
ATGTGATGTATTAACAGGAACAACACAGGGCGAGGTGCAGGCCACGTCAC
TCAAGACCTCAGCAATGGCCCTTCCTTATAGCTCGCCAGGGGAAATTTGT
GATGTGATGTAATGTCAAACTACGGTAAAATAAGAGTAAACATCACGTCA
CAGTAAATTGGAGTACACGTCACATCATATCACAGCACACTGTACACAGC
GAGGTAGGTCCCCGGGGCCCGCAACTGGCATGCCATGGTCGAAAATAGCC
CAAGCAATACGCGTACAGTGCGAGAACACTCAATCTCACACACGTGCGAT
TGTACCTAGTCACAATTTATATGAATCAACGCGTACGATGCGTGTCTGCA
GATGTCGGTGGTAGAGATCAAGGCAGACCTGCGGGACCCGTACATACACT
GTACTTGGAAGAAATGCACTAGTACCGACAGTTTGAAGCTCCTCCTCAAC
TACTTGGACATTGTGCAATGAAGTGCCCTAACTACTTGGGCTCTTTGACA
CTCATACTCATTAACTACTTGGACATTATGAAATGAAGTGCCCTAACTAC
TTGGGCTCTTTCACGCTCATCCTCATTAACTACTTGGATATTTTGAAATG
AAGCGCACTAACTGCTTGGGCTCTTTAAAACTCATCCTCCTTAACTACTT
GGGCGCATGCAGATGTCTGCGGTGGAGATCAAGGCAGACCTGCGGGACCT
GTACATCATCTCTGCGAAGCAGGTGGACGTGGGCGGCAACAAGAAGGCCG
TTATCATCTCCGTACCCTACAAGCTGCTCAGGGCCTACCACAAGATTCAG
GCACGGCTCGTGCGGGAACTCGAGAAGAAGTTCAGGTGAGGGTGTTGTTC
GCAGTGGTGGAATATCGATCAGCAGATAGTTATCGGGCTCGACTGATTTG
TGGGTGGCGTAGCTAACTACTTGGGTTTAGTGTGGGTCGAATTGTCGAAT
GTCGGCTATCGACAGATATAGAGATCAGTAATGTCGATAAGTAGGTTGAT
TTTGCTTAGATATTCCGTCACTGGTTGTGTGGGTCACGGTTGCTGTACAG
AAGAAGTTCGGTGAGGGTGTTGTTTGGGTTACGGTTGTGGGCGGTTGCAT
GTGCTTCATGTGACTTTCACGGTCACAAACTGTCGGTACTACTGTACTGC
ATTTCTTCCAAGTACAGTGTATGTATATGTGCCCACTCTGTGCTTGCCGT
GGTCCCGAGACCGTTTGTTCAAAGTGTCCCAAGTAGTTAAGGAGGATTTT
CCAATGTCCCTAGTGGTTAGGAGACTTCGTTTCGTATCAGCCGAGTAGTC
ACGACGCTTAAATTGTACCATATATATGTAGAGTATATATATCCCAATTC
GCATTACATGACCGACATGAGTATATACACACAACAATACTTTATACAGT
ACTGTACCTGCTGCCGTAGCTCACCATCGACCTGTACTGTATATGCTGGT
GATATATTGTTTTGCAGCGGGCGCCACGTGGCGATCATTTAGTATATATC
GTATATACACACTACAGTACTTTACAGTACTGTACCTGCTGCCGTAACTC
ACCATGGACCTGTATATGCTGATGATGTATTGTTTTGCAGCGGGCGCCAC
GTGGTGATCATTGCCCACCGCACCATCCTGGGCAAGAGCTACGCGCGCTC
AACCAAGACCAAGGGGCCGCGCCCGTACTCCCGCACTCTCACCGCCGTGC
AGGAGGCTATCCTCGAGGTAAGATGCAGCAGTGTAGTGGGGGTTGTTGAT
TCATATAAATTGTAACGAGGTACAATCGCACGTGTGTGAGATTGAGTGTT
CTCTTGTTATCTTAGTGGTTATCCCATTTAAGAATTGAGCGTTCTCGTAT
TAATGGTTATCACATCAAAGAATTAAAACAAAAGGGGGCGGGGCGCTAGT
GCAGTGGGGGCATACAGTACGCGACACTGAGTTGGGAGCTGTGAAGTTGT
ACAGTATGTCTTCCTGGCGCAGTTTTCTGGTGCTTGGAAGTATTTTGGCT
CGGCTGTTGTAGCCTCTTTTGCTGTGTGACGTCTTGCAAGTACGCAATGA
CCCCAAGTGTCAAGTGATGTCTTGGAATGTGGTACAGTACAGTGCAGTAG
AGCACCGTAGTGTGATCTGTGTTGCGGTGTGGTGTGCTGCCAAGGTGGTT
TTTGTGGGGGGGGGTCATCCCTTTCCCCCCCGGGGTGGTTCCAGCACCGC
TTGCTGCCATAGAGTATAGTGACCCCGCATATCATTTCACCCCTACTTTT
TTATAGAGTACAACAATTCGGGCCCTACTACTGTACATAACTCCTTCCCC
GCTCAAGCTGCTTTTCTAGAGCCCTACAGTACTTAGCGACCATAGTATTC
ACAGGGAGAACACAGTAGTTTAGAAGCGCCGTACCTCAGCTGCTCGAGGG
GTTAGTAGATCAATGCGAATTTGGCTAAATACTTTGCCCGAATGGGAGTA
GCTCTGTCCCTTTTTCTGTTTGTGTTTTTACGTTGGCCTTCCATATGACG
TACAGCAGTTGATGCGCGATGCGGCTACCTATTGTGCTCATTTGCTTCGT
TGCCTTGCGACATAGCCTCGCGTGCTTGTTCTACGGTCCGCAGCTGAGAG
GTAAACTTGGGGTTGGCCCTCCTGCAGGAGCAAGCATCCGGCCATCAGCG
CTCAACTGTAGCGTGCTTTGTTACTGTACATACATTTTTTTTACGGCATG
CGAGTTCCGGGCCCCGTCCCACCAACCTAGGCGGGGACCTCATAAGAAGC
CCTTCGTTTCGCCCGCAGGGCATAGAAACCAAGCAAAGAAGCAACACTTA
ATAATGCGTGTTTGTTCTGTACGTTCCTTTGTCAGGACCTTGTGTACCCG
ACGGAGATTGTGGGCAAGCGCACACGCTGCCGGATGGACGGGACCAAGCT
GCTCAAGGTGCAGCTCGACCCTAAGGACCAGGTGAGATAGGGACAGAGAG
GTAGGGGTAGCCCTCAGAGTACTGGTACACGCTACTCGAGTACTCGTACA
TACATTACAGTTGGTGCTTTCGACACAGTAGTGCGCTGTACAGTAGGCGC
AGCGCAGTACTGCATACTGCAGAGTTGCTCACGGTGTAGCTCGACCCTAA
GGACCAGATATGCGCGTGCGTGTGAGAGACAGAGAGAGATCGGGGTAGCC
CTCAGAGTTACTCAAGGTGCAGCTCGACCCTAAGGACCAGGTGGGTGGGT
GTGGGTGAGAGAGAGAGATAGGGGTAGCCCTCAGAGTTTCTCAAGATGCA
GCTCAACCCTAAGGACCATGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG
AGAGAGAGAGAGGGGGAGAGAGATGGGGGTAGCCCTCGGAGTATTGGTAC
AGTAGCGGACTAGTGTGTGAGAGAGAGTGACAGAGATGTATATACTTCCG
GAAGTATATATATATATACGGATAGCCCTCACAGTACTGGTACACGCTAC
TGTACATCAGGCGGTACTTCTTGCCATACAGTACTGCACTGTACAGTAGG
CACAGCGCAGTACTGCATACTTGTACAACAGTCACAGCAGGTACGAGTAT
ATCGGATATGACCGGAACATCATACAGAAAGCCCTCTAGCAGTGGAGCAG
ACCGCCGGGAAGGGGTACTGTACTGTAAAGTACAGTGCCGTACATCTGCG
CTGCTGTGCGGCAAAGGCCTACGGCGCCTTCTTTTTCTGTGCCTGTGTAC
TTGGAAGCATTTGCACAACGGAGGCACAAGGGTCCACCCTTGCTGCCCGC
CTCTGTTTGGTGCGAGGGACGTGAAACCTTTGACCCTCTGCTGTGAGCGC
GCGACTCTTTGCCCTCGCTGTACATGCAGTAGATTTTTGCATGAAGACAA
ACGAGCGAGTGGGAACAACCAAGCGAGTGGGAAAGAAGAGGTGTCCACAA
CCAAGCGAGTGGGAAAGAAGAGGTGTCCCTACTTACACGGGTTCAGGGCC
CCACCCCAGGAAGCCCTGCCTTTCACTCGCCTTCACTCGCAGGGCATGCA
GAGCAGAAAAATAAAGAAAACAAGGAAGGAAGGGGGCAGGAGGGAATAAC
AGTGGAGGAGGGTTCTCAGTAGTTGTTGTGGTGACGGTAGCACGGTTTGC
CTGTTTGCTGGGTGTGGTGCACAAGGAGGCGTTTGGCAGGGTGCCTGACC
ACATCATCGGTACTTACATATCGGTACTTAGCTTGTCTTCCGTGACAACC
TCTGTGTGTGCTGGGTTGGCACTCAACCCCTACTCTAAGTGGTCCCTTCT
AGGGCCTTAACTAGAGATCATTGGGGGTAACTAGACCTAAAACGAAGACT
AATGAGGCCCTATATAGCCTCGAAGTGGACTTAACCCTTAAGTGGTGCCC
TTTTAGGCCCTTAACTAGAGGCAACTAGGGGTAATTAGACCTAAAATCAA
GGCTAATTAGGCCCTAGCTAATCTCTATGTGCCAACCCTGTCCGTGACAA
ACCTCTGTGTGTGTCTTTCAGGTGAACGTGGAGACCAAGCTGGACACCTT
CTCATCCGTGTACAAGAAGATGACCAGCAAGGACGTCGTCTTCGAGTTCC
CCGTGCAGGAGCCTTAG
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Coding sequence (CDS) from alignment at S-ischiensis_contig85:170645..176811-

>mRNA_S-ischiensis_contig85.20122.1 ID=mRNA_S-ischiensis_contig85.20122.1|Name=mRNA_S-ischiensis_contig85.20122.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1170bp|location=Sequence derived from alignment at S-ischiensis_contig85:170645..176811- (Schizocladia ischiensis KU_0333)
ATGTTCACGGGCGCAACGAAGATCCGCAAGCCTGCGGGCCAGGAGCCGGA
TGAGTTTGAGCAGTCAGTTGCCCAGGAGCTCTTCAATGTGGAGATGTTCA
CGGGCGCAACGAAGATCCGCAAGCCTGCGGGCCAGGAGCCGGATGAGTTT
GAGCAGTCAGTTGCCCAGGAGCTCTTCAATGTGGAGATGTCTGCGGTGGA
GATCAAGGCAGACCTGCGGGACCTGTACATCATCTCTGCGAAGCAGGTGG
ACGTGGGCGGCAACAAGAAGGCCGTTATCATCTCCGTACCCTACAAGCTG
CTCAGGGCCTACCACAAGATTCAGGCACGGCTCGTGCGGGAACTCGAGAA
GAAGTTCAGATGTCTGCGGTGGAGATCAAGGCAGACCTGCGGGACCTGTA
CATCATCTCTGCGAAGCAGGTGGACGTGGGCGGCAACAAGAAGGCCGTTA
TCATCTCCGTACCCTACAAGCTGCTCAGGGCCTACCACAAGATTCAGGCA
CGGCTCGTGCGGGAACTCGAGAAGAAGTTCAGCGGGCGCCACGTGGTGAT
CATTGCCCACCGCACCATCCTGGGCAAGAGCTACGCGCGCTCAACCAAGA
CCAAGGGGCCGCGCCCGTACTCCCGCACTCTCACCGCCGTGCAGGAGGCT
ATCCTCGAGCGGGCGCCACGTGGTGATCATTGCCCACCGCACCATCCTGG
GCAAGAGCTACGCGCGCTCAACCAAGACCAAGGGGCCGCGCCCGTACTCC
CGCACTCTCACCGCCGTGCAGGAGGCTATCCTCGAGGACCTTGTGTACCC
GACGGAGATTGTGGGCAAGCGCACACGCTGCCGGATGGACGGGACCAAGC
TGCTCAAGGTGCAGCTCGACCCTAAGGACCAGGACCTTGTGTACCCGACG
GAGATTGTGGGCAAGCGCACACGCTGCCGGATGGACGGGACCAAGCTGCT
CAAGGTGCAGCTCGACCCTAAGGACCAGGTGAACGTGGAGACCAAGCTGG
ACACCTTCTCATCCGTGTACAAGAAGATGACCAGCAAGGACGTCGTCTTC
GAGTTCCCCGTGCAGGAGCCTTAGGTGAACGTGGAGACCAAGCTGGACAC
CTTCTCATCCGTGTACAAGAAGATGACCAGCAAGGACGTCGTCTTCGAGT
TCCCCGTGCAGGAGCCTTAG
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