mRNA_S-ischiensis_contig85.20118.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig85.20118.1
Unique NamemRNA_S-ischiensis_contig85.20118.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig85.20118.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig85contigS-ischiensis_contig85:131248..136444 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-02_002110.1
Hectar predicted targeting categoryother localisation
Exons5
Model size643
Cds size642
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig85.20118.1prot_S-ischiensis_contig85.20118.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig85 131248..136444 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817339.3606517-CDS-S-ischiensis_contig85:131247..1315431622817339.3606517-CDS-S-ischiensis_contig85:131247..131543Schizocladia ischiensis KU_0333CDSS-ischiensis_contig85 131248..131543 +
1695741039.573635-CDS-S-ischiensis_contig85:131247..1315431695741039.573635-CDS-S-ischiensis_contig85:131247..131543Schizocladia ischiensis KU_0333CDSS-ischiensis_contig85 131248..131543 +
1622817339.371588-CDS-S-ischiensis_contig85:131910..1319821622817339.371588-CDS-S-ischiensis_contig85:131910..131982Schizocladia ischiensis KU_0333CDSS-ischiensis_contig85 131911..131982 +
1695741039.5898986-CDS-S-ischiensis_contig85:131910..1319821695741039.5898986-CDS-S-ischiensis_contig85:131910..131982Schizocladia ischiensis KU_0333CDSS-ischiensis_contig85 131911..131982 +
1622817339.3821962-CDS-S-ischiensis_contig85:132829..1329321622817339.3821962-CDS-S-ischiensis_contig85:132829..132932Schizocladia ischiensis KU_0333CDSS-ischiensis_contig85 132830..132932 +
1695741039.6032362-CDS-S-ischiensis_contig85:132829..1329321695741039.6032362-CDS-S-ischiensis_contig85:132829..132932Schizocladia ischiensis KU_0333CDSS-ischiensis_contig85 132830..132932 +
1622817339.392964-CDS-S-ischiensis_contig85:133649..1337601622817339.392964-CDS-S-ischiensis_contig85:133649..133760Schizocladia ischiensis KU_0333CDSS-ischiensis_contig85 133650..133760 +
1695741039.6127253-CDS-S-ischiensis_contig85:133649..1337601695741039.6127253-CDS-S-ischiensis_contig85:133649..133760Schizocladia ischiensis KU_0333CDSS-ischiensis_contig85 133650..133760 +
1622817339.4035697-CDS-S-ischiensis_contig85:136384..1364441622817339.4035697-CDS-S-ischiensis_contig85:136384..136444Schizocladia ischiensis KU_0333CDSS-ischiensis_contig85 136385..136444 +
1695741039.6221938-CDS-S-ischiensis_contig85:136384..1364441695741039.6221938-CDS-S-ischiensis_contig85:136384..136444Schizocladia ischiensis KU_0333CDSS-ischiensis_contig85 136385..136444 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig85.20118.1

>prot_S-ischiensis_contig85.20118.1 ID=prot_S-ischiensis_contig85.20118.1|Name=mRNA_S-ischiensis_contig85.20118.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=214bp
AEGYPRALHACVTGRSPVRHWVARHFPHRPVPRVSFTRCSFSALAMQHLA
PPMMQPPVGRGSGAYDDEMISAAMQISAQRQDIKQLGAQLAERQNDISRL
QGRLNVAEAEAQASRADNEALRVRIRQHQSELEDQRRKEQTLANELAQLK
QQLTNLPRESREEVAQLQRLVREHQAEKEDLLKAEKQAIATTQDTYKLLV
ERDRQVSALKAQLD
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mRNA from alignment at S-ischiensis_contig85:131248..136444+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig85.20118.1 ID=mRNA_S-ischiensis_contig85.20118.1|Name=mRNA_S-ischiensis_contig85.20118.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=5197bp|location=Sequence derived from alignment at S-ischiensis_contig85:131248..136444+ (Schizocladia ischiensis KU_0333)
GCAGAGGGGTATCCGCGCGCACTACACGCTTGTGTGACCGGTCGCTCGCC
CGTTCGACACTGGGTGGCGCGACACTTTCCCCACCGTCCCGTTCCCAGGG
TATCATTTACCCGCTGTTCGTTTTCGGCCCTTGCAATGCAGCACCTTGCC
CCTCCCATGATGCAGCCCCCCGTGGGCCGTGGCTCTGGGGCCTACGACGA
CGAGATGATATCGGCCGCCATGCAGATATCGGCACAGCGCCAAGACATCA
AGCAACTCGGGGCGCAGCTCGCTGAGCGCCAGAATGACATCTCCAGGTGT
GTGCTATCATCCACCCCGTACCCGCCCTAAATTGGTGTGCATCTGGTCCA
CGGCCCCGGTTGCAGCGCCGGATGGCCAGCGTTTCTTACAAGGACGGGTA
ATGGTATGGGTTGGAGCGCTGTAGCCCTGGCGGTTCCCTCAGGTCTGGTC
TCCCAACACGCTTTTGGGGGGAAGGGGGCACTTGGGGCCCTCCCTCCCTC
GTCCACTACAAGTAACCTGGCGGGCTTGACGGACAACCCTGCCGACTTTC
TTCTGACCAGCATCTTGCCCCAGCACTGGGGGCCCTCTGCCATGAGTTTG
GTCAGCTCGGATCCTGCTCGCTCTGAGCTGACCATGCCGTGTCCTTGCCC
TCGTGCGGAGCAGGTTGCAGGGGCGCTTGAACGTGGCGGAGGCGGAGGCT
CAGGCGTCCCGAGCGGACAATGAAGCTCTCAGGGTGTGAGTGTCCTAGCT
CTGTACTCTTGCTCAGAGGCTGTCTGCGAGTGTGAGTGCTGCTGTCTCTG
CATGTGGCTTTTGTTGGGGTTGCCGTTTATTGCCTGATCGCCGTGGCCCG
TGGTTGTGAGCGGCCAAGTAACGCTTTTACCCCTCCTAAATTGGACTTAC
ACACTAAAACCCTATGGTTATACGAACCTCAGGGTTAAAAGGGTTAAATC
CTACAGTTCAGACATTTAACTATGTGGATTAGTGCACCGTCAACCTCCAA
GGGCTGCAAGGACTTGCTCTGCATCGGGGCTGTTCGGCCTTTACTATGTT
GTACGGCGTGTGGTGGGTAGGCAGCCCACCGGCAGGCAGCTCGTTCGAGT
ACTCGTACCTGGCCGCTTCCCTCCGAAGGATTTAGTTGTCTGTCTTCACT
TTCATGGCCATTTTTTAAGAAGCGAGGGACACGAGACGAGTCATCTCTTG
ATCGACGAGCCCCGGGAGCGCCTTCATTCTGTAAGGGAAGCGGCGGCGAG
TTTTCACTCCCCGGCGCTAGATTCATTTCGGCCTCGTCCTGTTTTCCTGT
CTGATGTGCCTTACTGTACTGCTCTATGCCTTATTCAGGCGCATCCGGCA
GCAGCAGTCTGAGTTGGAGGACTTGGCAAATGTCATGCGGCCTCGTCCTG
TTTTCCTGTCTGCTGTGCTTTACTGTACTGTACTGCTCTGTGCCTTTTTT
CAGGCGCATCCGGCAGCATCAGTCTGAGTTGGAGGACTGTTTTCCTGTCT
GATGTGCCAAATGTCACGCGGCCTCGTCCTGTTTTCCTGTGTGATGCGCT
TTGCTGTACTGCTCTACTTCTGCCTTTTTCAGGCGCATCCGGCAGCACCA
GTCTGAACTGGAGGACCAGCGGCGGAAGGAGCAGACCCTGGCGAACGAGC
TGGCACAGCTCAAGCAGCAGCTCACAAACCTACCGGTGAGCAGGGTTGGC
ACTTAGAGGTTAGTTAGGGCCGAATTAGCCTTCATTTTAGGTCTAATTTC
CCCTGATTGCCTCAAATTAAGGGCCTAAGAGGGCACCACTTAGGGGCCAA
GTGCCAACCCTACCGGCAGAGTGCAGCGCACCCGCAACAAGTGAACAGGC
GTCTGCAAGCCCGGATGCTACGTATGTAGTACATATGTACTCATTGGCTT
GTCTTGCGACATAAACCTGGCATGCAATGCCGATAGCCCTAAGTGGAAAC
ATCGGGTTTGCCCTCCGACAGGAGCAGCTATTTAGCCATGGACTCTCACT
GCTCCGTCTCGCACGAGGCGCAGGGTCAATGGTCTCGGGACTACGGCAAG
CGCAACGCGAGTACATATACTTCGTATATGTGTTTATGCACTGTATAGTT
TTTTTTGCCGGGTTTGGGCCTCCTTGGCCAGGCCGCTGTGTGCTGCACAC
TGCCACACGAATATATACTGTACACTATGTGACATACACTGTGTGTGTAT
TGTCGCAGTGATGTAATATCCAAGCAAATCAACCTATTTATTGAGAGTAC
TGATCTTCAATCGATCGATAGTCGATATTCGATAGTTTAGCCAACACGAA
ATCCAAGTACGTCGAAGTAGTGAGTAACCACAAAACCAGTCGAGCCCGAT
AACGATCTACTGATCGATATCCCATCTCTGATTTGCGTGTGCATGCTTGC
AGCGGGAGTCCCGGGAAGAGGTGGCGCAGCTTCAACGGCTTGTGAGGGAG
CACCAGGCGGAGAAGGAAGATCTTCTCAAGGCTGAGAAGCAGGCCATCGC
CACCACCCAGGATGTGAGTCAGGCAGGGGAGGAGGAGGGGGTGGAGGAGG
AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGAGGAGGAGGAGGAGGA
GGAGGGGGAGGGGAAGACGATGGGGGTGGGGCGGTTACTCAAACATGGAG
AGCACGGCTGCTGTGTGATACCTAACCTTAGCTCCCCTACTCAACATGTT
GTACTACGTGGTATGTGACTAGGCGCCGGTTTCGACCGGTGAGGGCCAGT
TAACCGGCCATAGCCGATGGGATAACCGACGGGTGAGGCGGCCATTTCAC
CCTTGTTTTCACCCCTCGATTTCACTGGTTTTTGGACCTCCGCTATAGCA
GTTCCTCTATGAATGAAGTGTATTCACGAGTACATGTAGAAATATACTGG
TACTACATAGTATGTACCCACCATGTGCTTGCCTTGGTCCCGGAGACGTG
TTTGAAACTCTTTCGCAAACTATAGGGCTTAAAGTACTTCGAGTACTGAC
GTTTTTTGGTAccccccCCCCCACCCACCCAACCGACCAGCACGCCTACC
CAAACCAACACGAAAACAGCCCACCCACCATAAAGCCGTCAGATGAAACC
GTCAGTATTTTCGTCTGTCCCTATACACTTGTAGTTTGCGAAGAGATTCC
AACACTATGTACTGTAGCACTATACGAGTACACATACACGCTATACGGTA
GTCCCGGGACCGCCGCCCAGTTGATTTAAAGAATTGGAACCCCTGCCCAG
GATGGGGGGGTCCAGCACGGTCGGGCCTCGGGATACGGGCCGGGTCGCGC
CGGTACACATAGCCCGACGTGCCTGGTCCCCACGCCACGGCGTGCTGACG
TCCCCCCGCGGCCCAGGCACGGCCGCCATCCGATGGTCGAGTGAAGAGGT
CGAGGGCTCTCGTGTCCCGGTTCTCGGGACCGAGTAGTGTCGCCAGGGAG
CATCTTCCCCCCGCAGACTTAGGGTTTGGGTTAGGGTTCGCCAGGATCCG
TCAATTAGGTTTAGGTGTCACGGTGAGGTGGTGTCGCGTCGCGATTTCGA
CCACAAATTAGGCGGTAGACAGGCCTACCGGTCGGACCTTGGCGATATGC
TCCCGCAGTAACTTGCGACGGAGGGCCGGCTATGGCGGTTGCACTAGCCT
CAACCGCTGAACAGACTTCGGTTCAGGCTTCCGCTCTTCGCGGATGGGCC
TTCCGGACACACACACACACACACACACACACACAGACAGATGCATTTCC
ACAGCGGAAATCTTGTGGCGTGCCGAAACTACCACGGTCGTGGATTGGTT
TGTGCTTGCCTGGCCAGTGCAGACTCCGCATGCTCCCTGTGCCCTGGCGT
AGTAGGGAAGCGAGGGCCGACGATGGCCCAAGTGCTACTTATGATATGCA
CAGCGTGCGGAGTAGTGGAGACCATGTGCGCGAACCATGAGTAGGTACAG
TAGTGTACGCGAGTATGAGTCCACACTTTTGCGAACTACTTGGGTATATA
GAACCTCAGCCTCCTTAACTACTTGGGTACGTTGAAAACTCATTCTGCTG
GTATGGCGCGAGGGTCCATGATGGCCCAAGTGCTACTCTGAGTATGCACA
GCGTGCGGCGACAAGTTGAGTCCATGAACATGAATCAGGAGTATGTGTAT
GTACTCACGCTGTGCTTGCTGTAGTCCCGAGACTGTAGTCCCGAGATCAT
TGACCACGCGCCTGGATCAGAAAGAGCAGCCCCCCTCCCTCGCCTGGCAG
AGCCATGCATCATGAGCGCGCTCGCGCACGCGCACACACACACACACGTG
TACACATACACATACTACGAAGTATGTATACCCACTTGCACGTGTATCCT
TTGATGAAGCATATATGTCTGTCCGTCTTCCCTCTGTATCCCTCCTACAG
AGTACATCCTGCACAGTACGTAGCCTATACCCTCCGAAGAACATGTACGT
CGGACTATATGCAGTAGCCATGGCCGCCCCCCCTTGCCTGGGTCCCGCTG
TTTCACCCCGAGTCCCCTATTTCGGTTGAAAGCGCGCCCGTACTTCGAAG
CACCTGCGAGCAATCCTAATCAATCGACCTTTACCTTCTCGAAGCACGCC
TGGCATGACGATCTTACTGCAGACATACAAGCTTAGGCCCGTATTTCGAA
GCTCTTGCGAGCAGTATATGTACTCACGTTGTGCTTGCCGTAGTCGCGAG
ACCATTGACCACGCGCCTCGGTCGAGACGGAGCAGTGCCAATTGTAACGT
TTACCTTTTCAAAATAACGTTTACCTTTTCAAAATACACGTGACTTGGCG
TGACATGTGGCAGACGTACAAGCTGCTGGTGGAGCGGGACCGCCAGGGGA
CCGCCTTTCGAGAAAGAAAATATTCGAGAACAAAAAACTCCCAAGAATTG
TTTTCAACAAAAAGCACAATACTTCTGCATTCTAATGCAAGTTTCAAAAA
ATATACGAAGTAGCTACGAAGTATAGGGAAGGGCCACTGCTGAGGTCTCT
AGTGACGTGGCCCGCGCCTCGCCCCGTGTTGTTCCTGTTAATACGTAGTA
CAAAATAACAAAAGGTCAGAAACACCTGCGAGCAATCCTAATCGTACAAG
TAGCATGAAACACACGTGACGCGGCGACATGTGGCAGACGTACAAGCTGC
TGGTGGAGCGGGACCGCCAGGTTTCCGCCCTCAAGGCACAGCTCGAC
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Coding sequence (CDS) from alignment at S-ischiensis_contig85:131248..136444+

>mRNA_S-ischiensis_contig85.20118.1 ID=mRNA_S-ischiensis_contig85.20118.1|Name=mRNA_S-ischiensis_contig85.20118.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1284bp|location=Sequence derived from alignment at S-ischiensis_contig85:131248..136444+ (Schizocladia ischiensis KU_0333)
GCAGAGGGGTATCCGCGCGCACTACACGCTTGTGTGACCGGTCGCTCGCC
CGTTCGACACTGGGTGGCGCGACACTTTCCCCACCGTCCCGTTCCCAGGG
TATCATTTACCCGCTGTTCGTTTTCGGCCCTTGCAATGCAGCACCTTGCC
CCTCCCATGATGCAGCCCCCCGTGGGCCGTGGCTCTGGGGCCTACGACGA
CGAGATGATATCGGCCGCCATGCAGATATCGGCACAGCGCCAAGACATCA
AGCAACTCGGGGCGCAGCTCGCTGAGCGCCAGAATGACATCTCCAGGCAG
AGGGGTATCCGCGCGCACTACACGCTTGTGTGACCGGTCGCTCGCCCGTT
CGACACTGGGTGGCGCGACACTTTCCCCACCGTCCCGTTCCCAGGGTATC
ATTTACCCGCTGTTCGTTTTCGGCCCTTGCAATGCAGCACCTTGCCCCTC
CCATGATGCAGCCCCCCGTGGGCCGTGGCTCTGGGGCCTACGACGACGAG
ATGATATCGGCCGCCATGCAGATATCGGCACAGCGCCAAGACATCAAGCA
ACTCGGGGCGCAGCTCGCTGAGCGCCAGAATGACATCTCCAGGTTGCAGG
GGCGCTTGAACGTGGCGGAGGCGGAGGCTCAGGCGTCCCGAGCGGACAAT
GAAGCTCTCAGGGTGTTGCAGGGGCGCTTGAACGTGGCGGAGGCGGAGGC
TCAGGCGTCCCGAGCGGACAATGAAGCTCTCAGGGTGCGCATCCGGCAGC
ACCAGTCTGAACTGGAGGACCAGCGGCGGAAGGAGCAGACCCTGGCGAAC
GAGCTGGCACAGCTCAAGCAGCAGCTCACAAACCTACCGGCGCATCCGGC
AGCACCAGTCTGAACTGGAGGACCAGCGGCGGAAGGAGCAGACCCTGGCG
AACGAGCTGGCACAGCTCAAGCAGCAGCTCACAAACCTACCGCGGGAGTC
CCGGGAAGAGGTGGCGCAGCTTCAACGGCTTGTGAGGGAGCACCAGGCGG
AGAAGGAAGATCTTCTCAAGGCTGAGAAGCAGGCCATCGCCACCACCCAG
GATCGGGAGTCCCGGGAAGAGGTGGCGCAGCTTCAACGGCTTGTGAGGGA
GCACCAGGCGGAGAAGGAAGATCTTCTCAAGGCTGAGAAGCAGGCCATCG
CCACCACCCAGGATACGTACAAGCTGCTGGTGGAGCGGGACCGCCAGGTT
TCCGCCCTCAAGGCACAGCTCGACACGTACAAGCTGCTGGTGGAGCGGGA
CCGCCAGGTTTCCGCCCTCAAGGCACAGCTCGAC
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