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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 2247 |
| Cds size | 1665 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817339.2818706-UTR-S-ischiensis_contig85:115310..115813 | 1622817339.2818706-UTR-S-ischiensis_contig85:115310..115813 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig85 115311..115813 - |
| 1695741039.5133696-UTR-S-ischiensis_contig85:115310..115813 | 1695741039.5133696-UTR-S-ischiensis_contig85:115310..115813 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig85 115311..115813 - |
| 1622817339.3305814-UTR-S-ischiensis_contig85:119825..119904 | 1622817339.3305814-UTR-S-ischiensis_contig85:119825..119904 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig85 119826..119904 - |
| 1695741039.561679-UTR-S-ischiensis_contig85:119825..119904 | 1695741039.561679-UTR-S-ischiensis_contig85:119825..119904 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig85 119826..119904 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817339.2926302-CDS-S-ischiensis_contig85:115813..115883 | 1622817339.2926302-CDS-S-ischiensis_contig85:115813..115883 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig85 115814..115883 - |
| 1695741039.5253842-CDS-S-ischiensis_contig85:115813..115883 | 1695741039.5253842-CDS-S-ischiensis_contig85:115813..115883 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig85 115814..115883 - |
| 1622817339.3049417-CDS-S-ischiensis_contig85:117248..118826 | 1622817339.3049417-CDS-S-ischiensis_contig85:117248..118826 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig85 117249..118826 - |
| 1695741039.5378115-CDS-S-ischiensis_contig85:117248..118826 | 1695741039.5378115-CDS-S-ischiensis_contig85:117248..118826 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig85 117249..118826 - |
| 1622817339.3168638-CDS-S-ischiensis_contig85:119808..119825 | 1622817339.3168638-CDS-S-ischiensis_contig85:119808..119825 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig85 119809..119825 - |
| 1695741039.5499134-CDS-S-ischiensis_contig85:119808..119825 | 1695741039.5499134-CDS-S-ischiensis_contig85:119808..119825 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig85 119809..119825 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig85.20115.1 >prot_S-ischiensis_contig85.20115.1 ID=prot_S-ischiensis_contig85.20115.1|Name=mRNA_S-ischiensis_contig85.20115.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=555bp
MLMLIRCDRLSHMRETYEAHDVAVLEQCLMDHQWDVHKACSALAASDAAA
TAAANSCAASASSSSSSSAATATPSSMAWLRQGMNFFRDKFGKANGSRGR
DYDGGGGAGPGTPTGTPRHKRARTTGVTPQSSHAHISQASPANAAPATPG
SGKRTGATSSLGGRVPPDASAASALQEESKSPEARRVPRSVDAPGSEVEL
VEVRSGAQRAGKEKPSAGGPGPSRPGGGGRATGWFIHAPSVDGSGACSAS
GSGSGSGSPVCSEGEEDEKGDGPLRDARRGGATGAETSRCTGGPGARGAT
GAGPVGRGLGPETEAISLEGKEAGRCGRSGGGGGGGEASIRGAEDGDRRW
DRDRCDPYEHGPSWRGDGSVGGSGGGEGSGSGSGIGRPARSRHKHSPPRE
EGARAAAAGSACTVGGRAHEQSPPGRGQAAGAGSRPALPGPYATNTSGSS
SNCPPPSPSLPAQAAGAWAPAVSPPPPPPPPAPAPSLWALGWTFDRHSGD
SVRAARRDVEARRARQERARSVSGRQTQEQLRQIRNSRQIQYWGARQRDG
PAGP* back to topmRNA from alignment at S-ischiensis_contig85:115311..119904- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig85.20115.1 ID=mRNA_S-ischiensis_contig85.20115.1|Name=mRNA_S-ischiensis_contig85.20115.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=4594bp|location=Sequence derived from alignment at S-ischiensis_contig85:115311..119904- (Schizocladia ischiensis KU_0333)
GGGAGTGGGAGGCGGGGCACCTGGTCGTGTGCGGGGGGGCGGGCAAGGTG
AAATTGCGGAGGCTGAGGCGGACACGCTCATGCTCATGCTCATCAGGTGG
GGGTTGTGTGTGTGTGGTGCGTGTGTGTGATGTGTGTGTTTGTGTTGTGT
GTGATGTGTGTGTTGTGGGGTGTGTGTGTGTGTGTTGCGTGTGCTTGCAC
GTGTGTGTGATGTGTGTGTTGTGTGTGCTTGCGTGTGTGTGTTATGTGTG
TGTTGTGTGTGTTGTGTGTGTGTGTGTGGTGTGTGTGTGTGTGCGCGCGC
GCGTGTTATGCGTGCTTGTGTGTGTGCGCGCCCATGTGTGCGTGTGTGTT
TTCCCGCTGTCTGCAAACTGCTCGATGGCATTGATGTCGACCCTGTGGCT
ACGTAACCCTTGATCCCCTGCTAAATTGGACTTTCACACTAAACTCCTAT
GACTATACGGACCCCAGGGGTAGCAGGGGTAACTCTAACCCTACGGTAGG
CCTGGCTGGGCCAGTGTCAATTGACTGTGCTCGTTGCATGTTGCCTGGCT
GTACCTGCTACTAGTGTGCACAGCAGCAATGTACTTGGACGTACTTGGAC
GTACTTGGAAGCACTCATGATTCACGTTCGCCGTCTCCTCTGCACGCTGT
GCATCTGCACTGCAATGCACCATACTGTACCCTCTGCACTACACTGCACT
GCACTGGACTGACTGTGCTCGACCGTGTTGTACTGTGCTGTGCCACAACT
GTACCGGACTGTACCGCAACTGTACTGCAACTCTACCGTACCCGTACCGC
AACTGTAGTGTAACTATGCCGCAACTGTACCATAACTGTACCGCAACTGT
ACCGTAGTGTACCACAACTGTACCATACTGTACCGTAGCTGCACAGCAAC
TGTCCCCCACCGTTCTGTCTGCACTGTGCTGCCCTCTCTGCTCCCCCTCT
AGGTGCGACTGTCCCACATGCGGGAGACATACGAGGGTTAGTACCGTACT
GTGCTGCAACTGTACCGTAGCTGTACCGCACCTGTGCCGTACTGTCCTGT
CTGCTCCGCACCGCTCTCGCTGCTCTAGGTGCGACCGCCTGTCCCACATG
CGGGAGACATACGAGGCCCACGACGTGGCTGTCCTGGAGCAGTGCCTCAT
GGACCATCAGTGGGACGTGCACAAAGCCTGCTCCGCCCTCGCTGCCTCCG
ATGCCGCCGCCACCGCCGCAGCCAACTCCTGCGCCGCATCCGCCTCCTCT
TCCTCCTCCTCCTCCGCTGCCACCGCCACCCCTTCCTCAATGGCATGGCT
GCGGCAGGGCATGAACTTCTTCCGCGACAAGTTTGGCAAGGCAAACGGCA
GCAGGGGGAGGGACTACGATGGCGGCGGGGGGGCAGGGCCTGGGACCCCC
ACGGGCACGCCGCGGCATAAGCGGGCGAGAACCACGGGCGTGACCCCACA
GTCCAGTCACGCACACATCTCCCAGGCGAGCCCCGCGAACGCTGCTCCGG
CCACCCCGGGGTCCGGCAAGCGCACAGGGGCAACAAGCAGTCTTGGCGGG
CGCGTGCCTCCAGACGCCTCAGCCGCCTCCGCATTACAGGAAGAGTCTAA
GTCTCCCGAAGCGCGGCGCGTGCCGCGTTCGGTGGATGCCCCTGGATCAG
AGGTCGAGCTTGTGGAGGTGCGGAGTGGGGCTCAACGAGCTGGCAAAGAA
AAGCCCAGCGCCGGCGGCCCGGGCCCGAGCCGGCCCGGGGGCGGCGGGCG
GGCCACGGGCTGGTTTATCCACGCCCCGAGCGTGGATGGCAGCGGAGCAT
GCTCCGCCTCGGGGTCAGGGTCAGGGTCAGGGTCGCCGGTTTGCAGCGAG
GGCGAGGAGGATGAAAAGGGGGATGGGCCGCTGCGGGACGCGCGGCGTGG
GGGTGCAACTGGGGCCGAAACCTCCAGGTGCACGGGTGGCCCTGGGGCTC
GGGGTGCCACTGGTGCAGGGCCGGTGGGGCGCGGGCTCGGGCCGGAGACG
GAGGCAATCTCACTTGAGGGTAAGGAGGCGGGACGTTGTGGCCGCAGCGG
CGGCGGCGGCGGCGGCGGCGAGGCCAGCATAAGGGGGGCCGAGGACGGGG
ACAGGCGATGGGACAGAGACCGCTGCGACCCTTACGAGCACGGCCCCTCT
TGGCGTGGTGACGGCAGTGTTGGCGGCAGCGGCGGCGGCGAAGGCAGCGG
CAGCGGCAGCGGCATTGGCAGACCAGCCAGGAGTCGGCACAAACACTCGC
CTCCCCGGGAGGAGGGTGCACGCGCTGCTGCTGCCGGCAGTGCATGCACG
GTTGGCGGGAGGGCGCACGAACAAAGTCCTCCGGGCCGGGGGCAGGCAGC
GGGGGCAGGGTCACGGCCGGCCTTGCCGGGCCCGTATGCTACCAATACTT
CCGGAAGTAGTTCCAACTGCCCGCCCCCGTCACCCTCATTACCAGCGCAG
GCGGCCGGTGCATGGGCCCCAGCGGTGTCCCCACCACCGCCGCCACCGCC
ACCGGCGCCGGCGCCTTCGTTGTGGGCCCTAGGGTGGACGTTTGACCGGC
ATTCTGGGGACTCTGTTCGTGCCGCCCGGCGGGACGTGGAGGCGCGGAGG
GCCCGGCAGGAACGTGCGCGCTCCGTCTCCGGCAGGCAGACACAGGAACA
GCTCAGGTGACGGCAGTGATAGAATATCTAAGCAAATCAAACAATTTTTT
TCGGCTGTAGTGATTTAAGTTATTTTGATGATCTATATCTATCGATAGTC
GATATTCGATAGTTTGACCCAGACTAAATCCAAGTACTTCGAAGTAGTTT
TTGGCATGAAGATAAGTAGCGAGTGGAAAAGAGGAGGTGTTCCTGCTTGC
GCGAGTTCAGGGCCCCCTGCCCCGGAAGCCCGTCTTTTCACCCGCCTTCG
AAGTAGTTAGTAGCGCCACCCACGAAATTAGTTGAGCCCGAAAACCATCT
ACTGGTCGATGTTCCATCACTGGGTGACGGAAGGGGACAGACCCGGGTGC
ATAAGATGTCGCTTGGGTGCTCCAGAAACGAAACAGATTCCTCGGGTGCT
TTTCCGGAGCTTACCTGCGTGTCTGAGCCGGTGCTTGCGCTGTATTTGGG
AACGTGTGTGATGGGACACTAGAGGCTCTAATCTGATGCGATGTGATGTG
ATATCCGTTTGGCATCACGTCATGTCACAATTGACGTACTCGTATCTATA
GAGTACGAAGTATTTCGTAGAGTACGGTAGGCTAGGGGTTTAGGTGGGAT
TCGTGTGTGCAATTGATACTTGGAAGTACTGGTGTAGCATCTCATGGGCA
ATTGATACTTGGAAGATCTACTGTAGTGTAGTACTTCCGGAAGCATGTCA
TGGGCAATTGGTACTTGGAAGTACGAAGTACGAAGTACAGTGTAGTGTGT
CGTGGGTGCTGCTGCTCGAGGTCCACACGTGGCCACGGTGACCGCTTTCG
CGCTAAGAGGCTGGGTGATTGGACCTCCCCCCCTCGTGCAGAGTGCCTCA
TGCCCATAGTGAGTGTCATCGCGGAAGTACAGTGCCACCCGAAGTACTGC
TAAGAGTGACTATTGATGTACCACGGTGGTGCTGATACTTCGTGGCCCAT
GGCTGACGTCCAATTTTCATGTCCGTGTACTGTCACCGTCACCGTCATTG
TCGTCATCATCGTCGTCACCGTCATCACCATCATCGTATTCGTCGTCATC
ATCATCATCATCATCGTCATCATTACCATGCCATCACATCATCATCATCA
TCGTCATCATCATTACCCTCATCATCATCACCATCGTCATCATCATCGTC
GTCATCATCATCATCATCACCACCACCAACACCACCACCACCACCACCAC
CACCACCATCATCATCATCATCGTGAACAACACCCCATCGCCTTGCTGGT
CGTTGGGGTGTTGTTGGCCGTGTGCCTGCCATATTGCAATACTTTTTTCT
TGGGGCTGGTGCACGTGACCCTGTGTGTTTGGCCCGACACTACATGTGTG
CATTGATGTTGGCGAGAGCAGGCAGATCCGCAACAGCAGGCAGATACAGT
ACTGGGGTGCTCGCCAACGTGACGGCCCTGCGGGCCCATAGCTCTCAACT
GCACAGTTTCGTAGCTTGCTGTAGTGTAGGTAGCTTGCTGTACTCTACTG
TTAAGTTGCAATGTACTGCACTGTACTGTACTTCAAGTACTGTTCTGGAC
AGTACAGCATAGAGTCCTCGCCACCGTCGACGGGCTCGGACACCACCTCA
GGCCGAGCACCTTGGGGAGAGGTAATGGGGAGGCCGGCAGGCCCCAGGCC
TCCATTGAGGCGTTCTACGCGAGGAGAGGGGTGGGAACCATACATGAGCG
GTGGCCACCGGTGAGCAGGTTCTTGGTAGCCACTTCGAACAACAGCTCAA
AACTTTGCCAAAGTGTCCACGATGGTAACACCAGATGAGGTACAAATTTT
CACGCGCCAGTTCGCATTTGTTCTCGAGTAGAGCTGGAAAGCCGAAGCGG
TGGCGTGTAAGGAACCGGGTGATTTGCCCCCCCCCCCGCGTAGAACGCCT
CATTGCGCCCTCGAAGAATGGTGGTGTATGCAATGCAGACGGCA back to topCoding sequence (CDS) from alignment at S-ischiensis_contig85:115311..119904- >mRNA_S-ischiensis_contig85.20115.1 ID=mRNA_S-ischiensis_contig85.20115.1|Name=mRNA_S-ischiensis_contig85.20115.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=3330bp|location=Sequence derived from alignment at S-ischiensis_contig85:115311..119904- (Schizocladia ischiensis KU_0333)
ATGCTCATGCTCATCAGATGCTCATGCTCATCAGGTGCGACCGCCTGTCC
CACATGCGGGAGACATACGAGGCCCACGACGTGGCTGTCCTGGAGCAGTG
CCTCATGGACCATCAGTGGGACGTGCACAAAGCCTGCTCCGCCCTCGCTG
CCTCCGATGCCGCCGCCACCGCCGCAGCCAACTCCTGCGCCGCATCCGCC
TCCTCTTCCTCCTCCTCCTCCGCTGCCACCGCCACCCCTTCCTCAATGGC
ATGGCTGCGGCAGGGCATGAACTTCTTCCGCGACAAGTTTGGCAAGGCAA
ACGGCAGCAGGGGGAGGGACTACGATGGCGGCGGGGGGGCAGGGCCTGGG
ACCCCCACGGGCACGCCGCGGCATAAGCGGGCGAGAACCACGGGCGTGAC
CCCACAGTCCAGTCACGCACACATCTCCCAGGCGAGCCCCGCGAACGCTG
CTCCGGCCACCCCGGGGTCCGGCAAGCGCACAGGGGCAACAAGCAGTCTT
GGCGGGCGCGTGCCTCCAGACGCCTCAGCCGCCTCCGCATTACAGGAAGA
GTCTAAGTCTCCCGAAGCGCGGCGCGTGCCGCGTTCGGTGGATGCCCCTG
GATCAGAGGTCGAGCTTGTGGAGGTGCGGAGTGGGGCTCAACGAGCTGGC
AAAGAAAAGCCCAGCGCCGGCGGCCCGGGCCCGAGCCGGCCCGGGGGCGG
CGGGCGGGCCACGGGCTGGTTTATCCACGCCCCGAGCGTGGATGGCAGCG
GAGCATGCTCCGCCTCGGGGTCAGGGTCAGGGTCAGGGTCGCCGGTTTGC
AGCGAGGGCGAGGAGGATGAAAAGGGGGATGGGCCGCTGCGGGACGCGCG
GCGTGGGGGTGCAACTGGGGCCGAAACCTCCAGGTGCACGGGTGGCCCTG
GGGCTCGGGGTGCCACTGGTGCAGGGCCGGTGGGGCGCGGGCTCGGGCCG
GAGACGGAGGCAATCTCACTTGAGGGTAAGGAGGCGGGACGTTGTGGCCG
CAGCGGCGGCGGCGGCGGCGGCGGCGAGGCCAGCATAAGGGGGGCCGAGG
ACGGGGACAGGCGATGGGACAGAGACCGCTGCGACCCTTACGAGCACGGC
CCCTCTTGGCGTGGTGACGGCAGTGTTGGCGGCAGCGGCGGCGGCGAAGG
CAGCGGCAGCGGCAGCGGCATTGGCAGACCAGCCAGGAGTCGGCACAAAC
ACTCGCCTCCCCGGGAGGAGGGTGCACGCGCTGCTGCTGCCGGCAGTGCA
TGCACGGTTGGCGGGAGGGCGCACGAACAAAGTCCTCCGGGCCGGGGGCA
GGCAGCGGGGGCAGGGTCACGGCCGGCCTTGCCGGGCCCGTATGCTACCA
ATACTTCCGGAAGTAGTTCCAACTGCCCGCCCCCGTCACCCTCATTACCA
GCGCAGGCGGCCGGTGCATGGGCCCCAGCGGTGTCCCCACCACCGCCGCC
ACCGCCACCGGCGCCGGCGCCTTCGTTGTGGGCCCTAGGGTGGACGTTTG
ACCGGCATTCTGGGGACTCTGTTCGTGCCGCCCGGCGGGACGTGGAGGCG
CGGAGGGCCCGGCAGGAACGTGCGCGCTCCGTCTCCGGCAGGCAGACACA
GGAACAGCTCAGGTGCGACCGCCTGTCCCACATGCGGGAGACATACGAGG
CCCACGACGTGGCTGTCCTGGAGCAGTGCCTCATGGACCATCAGTGGGAC
GTGCACAAAGCCTGCTCCGCCCTCGCTGCCTCCGATGCCGCCGCCACCGC
CGCAGCCAACTCCTGCGCCGCATCCGCCTCCTCTTCCTCCTCCTCCTCCG
CTGCCACCGCCACCCCTTCCTCAATGGCATGGCTGCGGCAGGGCATGAAC
TTCTTCCGCGACAAGTTTGGCAAGGCAAACGGCAGCAGGGGGAGGGACTA
CGATGGCGGCGGGGGGGCAGGGCCTGGGACCCCCACGGGCACGCCGCGGC
ATAAGCGGGCGAGAACCACGGGCGTGACCCCACAGTCCAGTCACGCACAC
ATCTCCCAGGCGAGCCCCGCGAACGCTGCTCCGGCCACCCCGGGGTCCGG
CAAGCGCACAGGGGCAACAAGCAGTCTTGGCGGGCGCGTGCCTCCAGACG
CCTCAGCCGCCTCCGCATTACAGGAAGAGTCTAAGTCTCCCGAAGCGCGG
CGCGTGCCGCGTTCGGTGGATGCCCCTGGATCAGAGGTCGAGCTTGTGGA
GGTGCGGAGTGGGGCTCAACGAGCTGGCAAAGAAAAGCCCAGCGCCGGCG
GCCCGGGCCCGAGCCGGCCCGGGGGCGGCGGGCGGGCCACGGGCTGGTTT
ATCCACGCCCCGAGCGTGGATGGCAGCGGAGCATGCTCCGCCTCGGGGTC
AGGGTCAGGGTCAGGGTCGCCGGTTTGCAGCGAGGGCGAGGAGGATGAAA
AGGGGGATGGGCCGCTGCGGGACGCGCGGCGTGGGGGTGCAACTGGGGCC
GAAACCTCCAGGTGCACGGGTGGCCCTGGGGCTCGGGGTGCCACTGGTGC
AGGGCCGGTGGGGCGCGGGCTCGGGCCGGAGACGGAGGCAATCTCACTTG
AGGGTAAGGAGGCGGGACGTTGTGGCCGCAGCGGCGGCGGCGGCGGCGGC
GGCGAGGCCAGCATAAGGGGGGCCGAGGACGGGGACAGGCGATGGGACAG
AGACCGCTGCGACCCTTACGAGCACGGCCCCTCTTGGCGTGGTGACGGCA
GTGTTGGCGGCAGCGGCGGCGGCGAAGGCAGCGGCAGCGGCAGCGGCATT
GGCAGACCAGCCAGGAGTCGGCACAAACACTCGCCTCCCCGGGAGGAGGG
TGCACGCGCTGCTGCTGCCGGCAGTGCATGCACGGTTGGCGGGAGGGCGC
ACGAACAAAGTCCTCCGGGCCGGGGGCAGGCAGCGGGGGCAGGGTCACGG
CCGGCCTTGCCGGGCCCGTATGCTACCAATACTTCCGGAAGTAGTTCCAA
CTGCCCGCCCCCGTCACCCTCATTACCAGCGCAGGCGGCCGGTGCATGGG
CCCCAGCGGTGTCCCCACCACCGCCGCCACCGCCACCGGCGCCGGCGCCT
TCGTTGTGGGCCCTAGGGTGGACGTTTGACCGGCATTCTGGGGACTCTGT
TCGTGCCGCCCGGCGGGACGTGGAGGCGCGGAGGGCCCGGCAGGAACGTG
CGCGCTCCGTCTCCGGCAGGCAGACACAGGAACAGCTCAGGCAGATCCGC
AACAGCAGGCAGATACAGTACTGGGGTGCTCGCCAACGTGACGGCCCTGC
GGGCCCATAGGCAGATCCGCAACAGCAGGCAGATACAGTACTGGGGTGCT
CGCCAACGTGACGGCCCTGCGGGCCCATAG back to top
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