mRNA_S-ischiensis_contig84.20048.1 (mRNA) Schizocladia ischiensis KU_0333
|
Overview
Homology
BLAST of mRNA_S-ischiensis_contig84.20048.1 vs. uniprot
Match: D8LRZ5_ECTSI (DNA gyrase subunit B n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRZ5_ECTSI) HSP 1 Score: 1063 bits (2748), Expect = 0.000e+0 Identity = 534/664 (80.42%), Postives = 584/664 (87.95%), Query Frame = 1
Query: 1 AAPVVGKVESDYGAEQITVLEGLEPVRKRPGMYIGSTGTKGLHHLVFEVVDNSIDEALAGHCDTVFVTLETDGSCTVRDNGRGIPCDRHPRTGKSALETVMTVLHAGGKFGGDESGYKVSGGLHGVGVSVVNALSEFARVEVVRGGQANKMGFERGVLSEPLQVTEAPEGATSGTMVNFRPDPEIFKTTTEFELERLAGRMDELAYLNAGVRIVMTDLRSGLDEDGNPAKQKEYLHRGGVREYVDLICADKTPLHPQVKTLRATGERDGVQVEACLRWSSDMYTDSLISFANGIRTGDGGTHLEGLKSTVTRTVNSQGKKSGKLKESAGNLGGEFVREGLTAVISVKVPEPEFEGQTKNRLGNPEVRGIVDQILAEELVKVFEWDPKVLAAILDKASSAQAAAAAAKAARDMVRRKSLLASTVLPGKLADCASRDPAESEIYIVEGDSAAGSAKQGRDRRTQAILPLRGKILNIEKCASEKIYQNNELQALISALGLGIKARALCGNEFDPASLRYHRIMIMTDADVDGAHIRILLLTFFFRYQRALLERGHMYIACPPLYKITQGSKTEIYAFDQEECDEIVASLPASPKVNLQRFKGLGEMMPRQLWDTTMNPDTRKLKIVTVDDAAAADRMFRVLMGDNVAPRKEFINAHASELQLDDLDF 1992
AA +V+ DYGA+QITVLEGLEPVRKRPGMYIGSTG KGLHHLVFEVVDN+IDEALAG+CDTV+VTLE DGSCTVRDNGRGIPCD HPRT KSALETV+TVLHAGGKFGGDESGYKVSGGLHGVGVSVVNALS++A VEVVRGG+ + + FERG L +A GT V F PDPEIFKTTTEFE ERL+GRMDELAYLNAGV IVM D RSG+DEDGN K + YLH+GGV+E+V+L+C +K LHP +K +RA GERDGVQVEACL WSSDMYTDSL+SFANGIRTGDGGTHLEGLKS VTRTVNS G+KSGKLK+S NLGG+FVREGLTAV+SVKVPEPEFEGQTKNRLGNPEVRGIVD I+ EELVK+FEW PK+L AILDKASSAQAAAAAAKAARDMVRRKSLL STVLPGKLADCASRDP ESEIYIVEGDSAAGSAKQGRDRRTQAILPLRGKILNIEKCASE+IYQNNELQALISALGLGIK GNEFD +SLRYHRI++MTDADVDG+HIRILLLTFFFRYQR+L+E G ++IACPPLYKI QG KTE Y + QEECD V+ LPASP V LQRFKGLGEMMP+QLWDTTM+P R LK+VTV+DAAAADR+F VLMGDNV PRKEFIN HA+ L+LDDLDF
Sbjct: 31 AAQAPSRVDGDYGADQITVLEGLEPVRKRPGMYIGSTGPKGLHHLVFEVVDNAIDEALAGYCDTVYVTLEEDGSCTVRDNGRGIPCDIHPRTKKSALETVLTVLHAGGKFGGDESGYKVSGGLHGVGVSVVNALSQWAEVEVVRGGKRHSLSFERGKTQGDLFTADAGAEEAGGTAVRFLPDPEIFKTTTEFEFERLSGRMDELAYLNAGVSIVMADARSGVDEDGNFKKTETYLHKGGVQEFVELMCKEKQHLHPDMKVIRALGERDGVQVEACLSWSSDMYTDSLVSFANGIRTGDGGTHLEGLKSIVTRTVNSMGRKSGKLKDSQSNLGGDFVREGLTAVVSVKVPEPEFEGQTKNRLGNPEVRGIVDSIVGEELVKLFEWHPKILGAILDKASSAQAAAAAAKAARDMVRRKSLLTSTVLPGKLADCASRDPVESEIYIVEGDSAAGSAKQGRDRRTQAILPLRGKILNIEKCASERIYQNNELQALISALGLGIK-----GNEFDASSLRYHRIVVMTDADVDGSHIRILLLTFFFRYQRSLIENGFVFIACPPLYKIKQG-KTEKYVYTQEECDSAVSELPASPAVQLQRFKGLGEMMPQQLWDTTMDPARRTLKLVTVEDAAAADRIFSVLMGDNVGPRKEFINEHANNLKLDDLDF 688
BLAST of mRNA_S-ischiensis_contig84.20048.1 vs. uniprot
Match: A0A835Z3N6_9STRA (DNA gyrase subunit B n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3N6_9STRA) HSP 1 Score: 1017 bits (2630), Expect = 0.000e+0 Identity = 498/658 (75.68%), Postives = 574/658 (87.23%), Query Frame = 1
Query: 19 KVESDYGAEQITVLEGLEPVRKRPGMYIGSTGTKGLHHLVFEVVDNSIDEALAGHCDTVFVTLETDGSCTVRDNGRGIPCDRHPRTGKSALETVMTVLHAGGKFGGDESGYKVSGGLHGVGVSVVNALSEFARVEVVRGGQANKMGFERGVLSEPLQVTEAPEGATSGTMVNFRPDPEIFKTTTEFELERLAGRMDELAYLNAGVRIVMTDLRSGLDEDGNPAKQKEYLHRGGVREYVDLICADKTPLHPQVKTLRATGERDGVQVEACLRWSSDMYTDSLISFANGIRTGDGGTHLEGLKSTVTRTVNSQGKKSGKLKESAGNLGGEFVREGLTAVISVKVPEPEFEGQTKNRLGNPEVRGIVDQILAEELVKVFEWDPKVLAAILDKASSAQAAAAAAKAARDMVRRKSLLASTVLPGKLADCASRDPAESEIYIVEGDSAAGSAKQGRDRRTQAILPLRGKILNIEKCASEKIYQNNELQALISALGLGIKARALCGNEFDPASLRYHRIMIMTDADVDGAHIRILLLTFFFRYQRALLERGHMYIACPPLYKITQGSKTEIYAFDQEECDEIVASLPASPKVNLQRFKGLGEMMPRQLWDTTMNPDTRKLKIVTVDDAAAADRMFRVLMGDNVAPRKEFINAHASELQLDDLDF 1992
KV +DYGA+QITVLEGLEPVRKRPGMYIGS+GTKGLHHL+FEVVDNSIDEALAGHCD VFVTLETDGSCTV DNGRGIPC HP+TGKSALETVMTVLHAGGKFGGD SGYKVSGGLHGVG+SVVNALSE+ +VEV RGG + M F +G P+++ + T+GT V F+PD EIFKTTT FE +RL+ RMDELA+LNAGVR++MTD+R GLD DG P KQ+EY H+GG+REYV+L+C +KT LHP+V + ATGE+DGV VEACL WSSDMY+D L+SFANGIRT DGGTHL+ LK +TRTVN+ GKK+GK+K+SAG++GGEFVREGLTA++ VKVPEPEFEGQTKNRLGNPEVR IVD +++E+L KVFEW+PKVLAAI+DKA+SAQ AAAAAKAARDMVRRKSLL STVLPGKLADCASRDP+E+EIYIVEGDSAAGSAKQGRDRRTQAILPLRGKILNIEKCA+EKIYQNNELQALISALGLG+K G +F+ LRYHRI+IMTDADVDG+HIRILLLTFFFRYQRALLE GH+YIACPPLYK++QG K ++Y + QEE D ++ +LP SP V+LQRFKGLGEMMP+QLW+TTM+P R LK V ++DA AD+MF +LMGD+VAPRKEFIN HA L LDDLDF
Sbjct: 28 KVNTDYGADQITVLEGLEPVRKRPGMYIGSSGTKGLHHLIFEVVDNSIDEALAGHCDAVFVTLETDGSCTVSDNGRGIPCALHPQTGKSALETVMTVLHAGGKFGGDGSGYKVSGGLHGVGISVVNALSEWVKVEVRRGGDLHTMEFAQGKTQGPMEIVKGGADGTTGTKVRFKPDAEIFKTTTVFEFDRLSSRMDELAFLNAGVRLIMTDMREGLDADGKPIKQQEYFHQGGMREYVELMCTEKTCLHPEVPVIVATGEKDGVAVEACLSWSSDMYSDCLVSFANGIRTADGGTHLDSLKQVITRTVNNLGKKNGKIKDSAGSIGGEFVREGLTAIVHVKVPEPEFEGQTKNRLGNPEVRSIVDAVVSEQLQKVFEWNPKVLAAIIDKATSAQQAAAAAKAARDMVRRKSLLTSTVLPGKLADCASRDPSETEIYIVEGDSAAGSAKQGRDRRTQAILPLRGKILNIEKCANEKIYQNNELQALISALGLGVK-----GVDFELEKLRYHRIVIMTDADVDGSHIRILLLTFFFRYQRALLEGGHVYIACPPLYKVSQGRK-DVYVYTQEELDALLPTLPPSPAVSLQRFKGLGEMMPQQLWETTMDPAKRTLKAVRIEDAVVADKMFTMLMGDHVAPRKEFINTHAKSLVLDDLDF 679
BLAST of mRNA_S-ischiensis_contig84.20048.1 vs. uniprot
Match: A0A4D9D639_9STRA (DNA gyrase subunit B n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D639_9STRA) HSP 1 Score: 925 bits (2391), Expect = 0.000e+0 Identity = 472/668 (70.66%), Postives = 542/668 (81.14%), Query Frame = 1
Query: 1 AAPVVGKVESDYGAEQITVLEGLEPVRKRPGMYIGSTGTKGLHHLVFEVVDNSIDEALAGHCDTVFVTLETDGSCTVRDNGRGIPCDRHPRTGKSALETVMTVLHAGGKFGGDESGYKVSGGLHGVGVSVVNALSEFARVEVVRGGQANKMGFERGVLSEPLQVTEAPEG----ATSGTMVNFRPDPEIFKTTTEFELERLAGRMDELAYLNAGVRIVMTDLRSGLDEDGNPAKQKEYLHRGGVREYVDLICADKTPLHPQVKTLRATGERDGVQVEACLRWSSDMYTDSLISFANGIRTGDGGTHLEGLKSTVTRTVNSQGKKSGKLKESAGNLGGEFVREGLTAVISVKVPEPEFEGQTKNRLGNPEVRGIVDQILAEELVKVFEWDPKVLAAILDKASSAQAAAAAAKAARDMVRRKSLLASTVLPGKLADCASRDPAESEIYIVEGDSAAGSAKQGRDRRTQAILPLRGKILNIEKCASEKIYQNNELQALISALGLGIKARALCGNEFDPASLRYHRIMIMTDADVDGAHIRILLLTFFFRYQRALLERGHMYIACPPLYKITQGSKTEIYAFDQEECDEIVASLPASPKVNLQRFKGLGEMMPRQLWDTTMNPDTRKLKIVTVDDAAAADRMFRVLMGDNVAPRKEFINAHASELQLDDLDF 1992
++P V YGA++ITVLEGLEPVRKRPGMYIGSTG KGLHHL+FEVVDNSIDEALAGHC V VT+ DGS TV D+GRGIPC+ H +TG+SALETV+TVLHAGGKFGGD SGYKVSGGLHGVGVSVVNALSE V R G+ + M F RG +++ P+ +TSGT V F+PD EIFKT+T FE +R++GR+DELAYLNAG+RIVMTD R +++E+ H GG+REYV L+C+ K LHP V + A GE++GV VEA LRWS D Y D LI FANGIRTGDGGTHL+GLKS +TRT+NS +K+GKLK+ NL G+FVREGLTA++SVKVP+PEFEGQTKNRLGNPEVRGIVD I+ E LV FEW+P+VL AI+DKA SAQ AA AAKAARDMVRRKSLL +TVLPGKLADC+SRDP ESEIYIVEGDSAAGSAKQGRDRRTQAILPLRGKILNIEK A+EKIYQN ELQALISALGLGIK GNEFDPA+LRYHRIMIMTDADVDGAHIRILLLTF FRYQRAL+ERG++YIACPPLYK+TQG KT YA+ QEE E+ +S ++LQRFKGLGEMMP QLW+TTMNP TR LK VT++DAA AD+MF +LMGD V PRK+FIN +A L+LDDLDF
Sbjct: 85 SSPPSTPVGGSYGADKITVLEGLEPVRKRPGMYIGSTGVKGLHHLIFEVVDNSIDEALAGHCTAVEVTIGADGSVTVSDDGRGIPCEVHSKTGRSALETVLTVLHAGGKFGGDASGYKVSGGLHGVGVSVVNALSESLTATVRRDGKLHIMRFARGKPLGEMEIIPDPDAVIGSSTSGTSVRFKPDAEIFKTSTTFEFDRVSGRLDELAYLNAGIRIVMTDERG-------EGRRQEFFHEGGIREYVQLMCSSKEELHPDVAVIHAAGEKNGVAVEAALRWSKDQYDDLLIGFANGIRTGDGGTHLDGLKSVLTRTINSMARKAGKLKDGKDNLTGDFVREGLTAIVSVKVPDPEFEGQTKNRLGNPEVRGIVDTIVGESLVNTFEWNPRVLGAIVDKAMSAQQAAQAAKAARDMVRRKSLLQTTVLPGKLADCSSRDPVESEIYIVEGDSAAGSAKQGRDRRTQAILPLRGKILNIEKAATEKIYQNTELQALISALGLGIK-----GNEFDPATLRYHRIMIMTDADVDGAHIRILLLTFLFRYQRALVERGYVYIACPPLYKVTQG-KTVKYAYTQEELAEVQSSFKGKTALSLQRFKGLGEMMPVQLWETTMNPATRILKQVTIEDAAEADKMFMLLMGDAVGPRKDFINRNADALRLDDLDF 739
BLAST of mRNA_S-ischiensis_contig84.20048.1 vs. uniprot
Match: A0A7S3XY21_HETAK (DNA gyrase subunit B n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XY21_HETAK) HSP 1 Score: 899 bits (2323), Expect = 1.470e-315 Identity = 461/689 (66.91%), Postives = 540/689 (78.37%), Query Frame = 1
Query: 34 YGAEQITVLEGLEPVRKRPGMYIGSTGTKGLHHLVFEVVDNSIDEALAGHCDTVFVTLETDGSCTVRDNGRGIPCDRHPRTGKSALETVMTVLHAGGKFGGDESGYKVSGGLHGVGVSVVNALSEFARVEVVRGGQANKMGFERGVLSEPLQVTEAPEGATSGTMVNFRPDPEIFKTTTEFELERLAGRMDELAYLNAGVRIVMTDLRSGLDE--------------DGNPA-------------------KQKEYLHRGGVREYVDLICADKTPLH---PQVKTLRATGERDGVQVEACLRWSSDMYTDSLISFANGIRTGDGGTHLEGLKSTVTRTVNSQGKKSGKLKESAGNLGGEFVREGLTAVISVKVPEPEFEGQTKNRLGNPEVRGIVDQILAEELVKVFEWDPKVLAAILDKASSAQAAAAAAKAARDMVRRKSLLASTVLPGKLADCASRDPAESEIYIVEGDSAAGSAKQGRDRRTQAILPLRGKILNIEKCASEKIYQNNELQALISALGLGIKARALCGNEFDPASLRYHRIMIMTDADVDGAHIRILLLTFFFRYQRALLERGHMYIACPPLYKITQGSKTEIYAFDQEECDEIVASLPASPKVNLQRFKGLGEMMPRQLWDTTMNPDTRKLKIVTVDDAAAADRMFRVLMGDNVAPRKEFINAHASELQLDDLDF 1992
YGA+QITVLEGLEPVRKRPGMYIGSTG KGLHHLVFEVVDNSIDEALAGHCD + + + DGS +V+DNGRGIPC+ HP+TG+SALETV+TVLHAGGKFGGD SGYKVSGGLHGVGVSVVNALSE+ V V R G+ +++ F RG + L+ E + A GT V F PD +IFKT TEFE ++LAGR+DELAYLNAGVR+V+ DLR E DG+P ++K + H+GG+ E++DL+C DK PL P ++A G + GV+VEACLRWS DMY+D LISFANGI+T DGG+HL+GLK+ VTRTVN+ G+K+GKLKE NLGG+FVREGLTA+I+VKVPEPEFEGQTKNRLGNPEVR IVD I+AE+L +FEW PKVLAA+LDKA SA AARD+VRRKSLL STVLPGKLADCAS+DP SEIY+VEGDSAAGSAKQGRDR +QAILPLRGKILNIEK ASEKIYQNNELQALISALGLGIK G EF ++LRYH+I+IMTDADVDG+HIRILLLTFF+RYQR L+E+G +Y+ACPPLYK+TQG Y FDQ E D ++ LPASP LQRFKGLGEMMP QLWDTTMNP+TR LK VTV+++A AD++ VLMGD VAPRKEFI+ HA+EL ++DLDF
Sbjct: 11 YGADQITVLEGLEPVRKRPGMYIGSTGPKGLHHLVFEVVDNSIDEALAGHCDEILIIIHPDGSLSVQDNGRGIPCEVHPKTGRSALETVLTVLHAGGKFGGD-SGYKVSGGLHGVGVSVVNALSEWLEVTVGRDGKRHELSFARGKVQGDLRTAE--DAAARGTYVRFLPDAQIFKTQTEFEWDKLAGRLDELAYLNAGVRLVLRDLRPEARERAIAQHRAAVAAAADGDPKGEEEKELARQLAAQPLPEYREKAFYHKGGLEEFLDLLCEDKQPLSTDSPGDGLVKAVGTKAGVEVEACLRWSRDMYSDMLISFANGIKTNDGGSHLDGLKACVTRTVNAAGRKAGKLKEGDANLGGDFVREGLTAIINVKVPEPEFEGQTKNRLGNPEVRSIVDSIVAEQLNSIFEWHPKVLAAVLDKAQSAAXXXXXXXAARDLVRRKSLLTSTVLPGKLADCASKDPFRSEIYVVEGDSAAGSAKQGRDRESQAILPLRGKILNIEKAASEKIYQNNELQALISALGLGIK-----GQEFAESNLRYHKIIIMTDADVDGSHIRILLLTFFYRYQRELIEKGFVYVACPPLYKVTQGRGFSKYVFDQAELDALLKELPASPAPQLQRFKGLGEMMPTQLWDTTMNPETRILKRVTVEESALADKLLTVLMGDAVAPRKEFISTHAAELDMEDLDF 691
BLAST of mRNA_S-ischiensis_contig84.20048.1 vs. uniprot
Match: A0A7S2RLA2_9STRA (DNA gyrase subunit B n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RLA2_9STRA) HSP 1 Score: 900 bits (2325), Expect = 5.450e-315 Identity = 456/674 (67.66%), Postives = 539/674 (79.97%), Query Frame = 1
Query: 28 SDYGAEQITVLEGLEPVRKRPGMYIGSTGTKGLHHLVFEVVDNSIDEALAGHCDTVFVTLETDGSCTVRDNGRGIPCDRHPRTGKSALETVMTVLHAGGKFGGDESGYKVSGGLHGVGVSVVNALSEFARVEVVRGGQANKMGFERGVLSEPLQVTEAPE-----------GATS-GTMVNFRPDPEIFKTTTEFELERLAGRMDELAYLNAGVRIVMTDLRSGLDEDGNPAKQ-------KEYLHRGGVREYVDLICADKTPLHPQVKTLRATGERDGVQVEACLRWSSDMYTDSLISFANGIRTGDGGTHLEGLKSTVTRTVNSQGKKSGKLKESAGNLGGEFVREGLTAVISVKVPEPEFEGQTKNRLGNPEVRGIVDQILAEELVKVFEWDPKVLAAILDKASSAQAAAAAAKAARDMVRRKSLLASTVLPGKLADCASRDPAESEIYIVEGDSAAGSAKQGRDRRTQAILPLRGKILNIEKCASEKIYQNNELQALISALGLGIKARALCGNEFDPASLRYHRIMIMTDADVDGAHIRILLLTFFFRYQRALLERGHMYIACPPLYKITQGSKTEIYAFDQEECDEIVASLPASP-KVNLQRFKGLGEMMPRQLWDTTMNPDTRKLKIVTVDDAAAADRMFRVLMGDNVAPRKEFINAHASELQLDDLD 1989
+DY A+QITVLEGLEPVRKRPGMYIGSTG KGLHHLV+E+VDN++DEA+AGHC + ++L G V DNGRGIPCD H +TG SALETV+TVLHAGGKFGGD SGYKVSGGLHGVGVSVVNALS VEV R G ++++ F RG EPL V+ P G+TS GT V F PDP IF++TT +E +RLA R+DELA+LNA + +V+ D R ED NP+++ KE+LHRGG+ E+V ++C KT LHP+ +RATG + V V+ CLRWSSD Y++ LISFANGI+TGDGG H++G+++ +TRTVNS +K GKLKESA NLGGEF+REGLTAV++VKVPEPEFEGQTKNRLGNP VR +VD ++ E L++VFEW PKVL+A++DKAS+AQA KAARDMVRRKSLL STVLPGKLADCASRDPA SEIYIVEGDSAAGSAKQGRDR+TQA+LPLRGKILNIEK A EKIYQNNELQALISALGLG+K EFD ASLRYH ++IMTDADVDGAHIRILLLTFF+RYQR L+E G++YIACPPL+K+TQG++ E Y + QEE DE++ L P KV +QRFKGLGEMMPRQLWDTTMNP+TRK++IVTVDDAAAADRMF VLMGD V PR+EFI HA L+ DLD
Sbjct: 78 TDYDAQQITVLEGLEPVRKRPGMYIGSTGAKGLHHLVWEIVDNAVDEAMAGHCTRIQISLLPGGEVEVCDNGRGIPCDLHAKTGLSALETVLTVLHAGGKFGGDASGYKVSGGLHGVGVSVVNALSTTLAVEVRRNGNSHRLDFSRGATVEPLAVSPLPPLQGDDGEGDLWGSTSTGTRVRFLPDPTIFQSTTTYEWDRLAARLDELAFLNANLSLVLVDHRG---EDSNPSEEEQNSDRRKEFLHRGGLEEFVQVLCEGKTLLHPEAPVIRATGALNDVAVDVCLRWSSDQYSEQLISFANGIKTGDGGAHVDGVRAVLTRTVNSAARKEGKLKESAPNLGGEFIREGLTAVVTVKVPEPEFEGQTKNRLGNPGVRSVVDSVVGEALLQVFEWHPKVLSALVDKASAAQAXXXXXKAARDMVRRKSLLTSTVLPGKLADCASRDPATSEIYIVEGDSAAGSAKQGRDRQTQAVLPLRGKILNIEKAAPEKIYQNNELQALISALGLGVK-----NGEFDLASLRYHSVVIMTDADVDGAHIRILLLTFFYRYQRRLIEDGYVYIACPPLFKVTQGTRIERYLYTQEELDELLPELAGQPGKVTVQRFKGLGEMMPRQLWDTTMNPETRKMRIVTVDDAAAADRMFSVLMGDAVEPRREFITDHAELLEFGDLD 743
BLAST of mRNA_S-ischiensis_contig84.20048.1 vs. uniprot
Match: A0A6N2EIC5_9CYAN (DNA gyrase subunit B n=12 Tax=Cyanobacteria TaxID=1117 RepID=A0A6N2EIC5_9CYAN) HSP 1 Score: 810 bits (2091), Expect = 4.990e-281 Identity = 415/659 (62.97%), Postives = 502/659 (76.18%), Query Frame = 1
Query: 19 KVESDYGAEQITVLEGLEPVRKRPGMYIGSTGTKGLHHLVFEVVDNSIDEALAGHCDTVFVTLETDGSCTVRDNGRGIPCDRHPRTGKSALETVMTVLHAGGKFGGDESGYKVSGGLHGVGVSVVNALSEFARVEVVRGGQANKMGFERGVLSEPLQVTEAPEGAT--SGTMVNFRPDPEIFKTTTEFELERLAGRMDELAYLNAGVRIVMTDLRSGLDEDGNPAKQKEYLHRGGVREYVDLICADKTPLHPQVKTLRATGERDGVQVEACLRWSSDMYTDSLISFANGIRTGDGGTHLEGLKSTVTRTVNSQGKKSGKLKESAGNLGGEFVREGLTAVISVKVPEPEFEGQTKNRLGNPEVRGIVDQILAEELVKVFEWDPKVLAAILDKASSAQAAAAAAKAARDMVRRKSLLASTVLPGKLADCASRDPAESEIYIVEGDSAAGSAKQGRDRRTQAILPLRGKILNIEKCASEKIYQNNELQALISALGLGIKARALCGNEFDPASLRYHRIMIMTDADVDGAHIRILLLTFFFRYQRALLERGHMYIACPPLYKITQGSKTEIYAFDQEECDEIVASLPASPKVNLQRFKGLGEMMPRQLWDTTMNPDTRKLKIVTVDDAAAADRMFRVLMGDNVAPRKEFINAHASELQLDDLD 1989
KV++DYGAEQI VLEGLEPVRKRPGMYIGSTG +GLHHLV+EVVDNS+DEALAGHCD + V + DGSC V DNGRGIP D HPRTG+SALETV+TVLHAGGKFG GYKVSGGLHGVGVSVVNALSE+ V V R GQ ++ FERG L+ + A G +GT V F PD EIF EF+ + LA R+ ELAYLN GVR+V D R+ +G ++ Y + GG+REYV + A+K PLH + + AT +DGVQVEA L+W D Y+DS++ FAN IRT DGGTH+EGLK+ +TRT+N+ KK GK KE+ NL GE +REGLTAV+SVKVPEPEFEGQTK +LGN EVRGIVD ++ E L + E++P V+ IL+KA A AA AA+ AR++VRRKS+L S+ LPGKLADC+SRDP+ESEIYIVEGDSA GSAKQGRDRR QAILPLRGKILNIEK KIY+N E+QALI+ALGLGIK G EFD +LRYHRI+IMTDADVDGAHIR L+LTFFFRYQ+AL+E G+++IACPPLYK+ +G K Y +++ E + + S +QRFKGLGEMMP+QLW+TTM+P TR +K V ++DA ADR+F +LMGD VAPR+EFI AH++EL L LD
Sbjct: 6 KVQNDYGAEQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALAGHCDQILVVIHADGSCGVTDNGRGIPTDVHPRTGRSALETVLTVLHAGGKFG--SGGYKVSGGLHGVGVSVVNALSEWVEVTVHRAGQEHRQRFERGAPIGSLRSSPAAAGEQERTGTAVRFLPDHEIFSGGIEFDYQTLAARLRELAYLNGGVRVVFRDERAAARNEGGEPHEETYFYEGGIREYVAYMNAEKDPLHRDIIYVNAT--KDGVQVEAALQWCVDAYSDSILGFANNIRTVDGGTHIEGLKTVLTRTLNAFAKKRGKRKEADSNLAGENIREGLTAVLSVKVPEPEFEGQTKTKLGNTEVRGIVDTLVGEALAEFLEFNPSVIDLILEKAIQAFNAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPSESEIYIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNTEIQALITALGLGIK-----GEEFDEKNLRYHRIVIMTDADVDGAHIRTLILTFFFRYQKALVEGGYIHIACPPLYKVERG-KNHTYCYNEGELKKTIESFGEKANYTIQRFKGLGEMMPKQLWETTMDPSTRTMKRVEIEDALEADRIFTILMGDKVAPRREFIEAHSAELDLAQLD 654
BLAST of mRNA_S-ischiensis_contig84.20048.1 vs. uniprot
Match: A0A1Z3HK71_9CYAN (DNA gyrase subunit B n=1 Tax=Halomicronema hongdechloris C2206 TaxID=1641165 RepID=A0A1Z3HK71_9CYAN) HSP 1 Score: 807 bits (2085), Expect = 2.900e-280 Identity = 417/655 (63.66%), Postives = 506/655 (77.25%), Query Frame = 1
Query: 28 SDYGAEQITVLEGLEPVRKRPGMYIGSTGTKGLHHLVFEVVDNSIDEALAGHCDTVFVTLETDGSCTVRDNGRGIPCDRHPRTGKSALETVMTVLHAGGKFGGDESGYKVSGGLHGVGVSVVNALSEFARVEVVRGGQANKMGFERGVLSEPLQVTEAPEGATSGTMVNFRPDPEIFKTTTEFELERLAGRMDELAYLNAGVRIVMTDLRSGLDEDGNPAKQKEYLHRGGVREYVDLICADKTPLHPQVKTLRATGERDGVQVEACLRWSSDMYTDSLISFANGIRTGDGGTHLEGLKSTVTRTVNSQGKKSGKLKESAGNLGGEFVREGLTAVISVKVPEPEFEGQTKNRLGNPEVRGIVDQILAEELVKVFEWDPKVLAAILDKASSAQAAAAAAKAARDMVRRKSLLASTVLPGKLADCASRDPAESEIYIVEGDSAAGSAKQGRDRRTQAILPLRGKILNIEKCASEKIYQNNELQALISALGLGIKARALCGNEFDPASLRYHRIMIMTDADVDGAHIRILLLTFFFRYQRALLERGHMYIACPPLYKITQGSKTEIYAFDQEECDEIVAS-LPASPKVNLQRFKGLGEMMPRQLWDTTMNPDTRKLKIVTVDDAAAADRMFRVLMGDNVAPRKEFINAHASELQLDDLD 1989
++YGAEQI VLEGLEPVRKRPGMYIGSTG +GLHHLV+EVVDNS+DEALAG+CD + ++L DGS TV D+GRGIP D HPRTGKSALETVMTVLHAGGKFGG GYKVSGGLHGVG+SVVNALSE+ V V R ++ FERG+ L+ TEA GT ++F PD +IF T EF+ LAGR+ ELAYLNAGV IV +D R L D N + + + GG+REY+ I DK PLH ++ + GERDGVQVEA L+W +D YTD+L+ FAN IRT DGGTHLEGLK+ +TRT+N+ +K K KE NLGGE +REGLT +ISVKVP+PEFEGQTK +LGN EVRGIVD ++ E L + ++ P V AIL+KA A AA AA+ AR++VRRKS+L S+ LPGKLADC+SRDPAESEI+IVEGDSA GSAKQGRDRR QAILPLRGKILNIEK KIY+N E+QALI+ALGLGIK G +FD + LRYHRI +MTDADVDGAHIR LLLTFF+RYQR ++++G++YIACPPLYK+ +G ++ Y + E D+++A+ LPA+ ++QRFKGLGEMMP QLWDTTMNP+TR LK V ++DAA ADR+F VLMGD VAPR+EFI H +L+L+DLD
Sbjct: 3 TEYGAEQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALAGYCDRIEISLNQDGSVTVIDDGRGIPTDIHPRTGKSALETVMTVLHAGGKFGG--GGYKVSGGLHGVGISVVNALSEWVEVTVWREDTVHRQRFERGLSVTELE-TEADPSERRGTSISFMPDKQIFTTGIEFDYSTLAGRLRELAYLNAGVEIVFSDYRLHL-LDSNDPRVSTFHYAGGIREYIAYINHDKQPLHDEIIFIE--GERDGVQVEAALQWCADAYTDNLLGFANNIRTVDGGTHLEGLKAVLTRTMNTIARKRNKRKEGEANLGGENIREGLTGIISVKVPDPEFEGQTKTKLGNTEVRGIVDSLVNERLTEYLDFHPNVADAILEKAIQAFNAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPAESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIEKTDDTKIYKNTEIQALITALGLGIK-----GEDFDSSQLRYHRICLMTDADVDGAHIRTLLLTFFYRYQREMVDQGYVYIACPPLYKVERG-RSHWYCYSDRELDQLIANELPANANYSVQRFKGLGEMMPTQLWDTTMNPETRTLKKVEIEDAAEADRIFTVLMGDRVAPRREFIETHGPKLKLEDLD 645
BLAST of mRNA_S-ischiensis_contig84.20048.1 vs. uniprot
Match: A0A524RPU6_9CYAN (DNA gyrase subunit B n=1 Tax=Aphanocapsa feldmannii 277cV TaxID=2507553 RepID=A0A524RPU6_9CYAN) HSP 1 Score: 806 bits (2081), Expect = 1.450e-279 Identity = 415/657 (63.17%), Postives = 503/657 (76.56%), Query Frame = 1
Query: 19 KVESDYGAEQITVLEGLEPVRKRPGMYIGSTGTKGLHHLVFEVVDNSIDEALAGHCDTVFVTLETDGSCTVRDNGRGIPCDRHPRTGKSALETVMTVLHAGGKFGGDESGYKVSGGLHGVGVSVVNALSEFARVEVVRGGQANKMGFERGVLSEPLQVTEAPEGATSGTMVNFRPDPEIFKTTTEFELERLAGRMDELAYLNAGVRIVMTDLRSGLDEDGNPAKQKEYLHRGGVREYVDLICADKTPLHPQVKTLRATGERDGVQVEACLRWSSDMYTDSLISFANGIRTGDGGTHLEGLKSTVTRTVNSQGKKSGKLKESAGNLGGEFVREGLTAVISVKVPEPEFEGQTKNRLGNPEVRGIVDQILAEELVKVFEWDPKVLAAILDKASSAQAAAAAAKAARDMVRRKSLLASTVLPGKLADCASRDPAESEIYIVEGDSAAGSAKQGRDRRTQAILPLRGKILNIEKCASEKIYQNNELQALISALGLGIKARALCGNEFDPASLRYHRIMIMTDADVDGAHIRILLLTFFFRYQRALLERGHMYIACPPLYKITQGSKTEIYAFDQEECDEIVASLPASPKVNLQRFKGLGEMMPRQLWDTTMNPDTRKLKIVTVDDAAAADRMFRVLMGDNVAPRKEFINAHASELQLDDLD 1989
KV++ YGAEQI VLEGLEPVRKRPGMY+GSTG +GLHHLV+E+VDNS+DE LAGHCD + + L DGS V DNGRGIP D HP TGKSALETV+TVLHAGGKFGGD SGYKVSGGLHGVGVSVVNALS + V V R GQ + FERGV L G T GT + F PD EIF + EF+ LA R+ +LAYLN GVRI TD R+ G P + Y + GG++EYV + DK P+HPQ+ ++ E+DGVQVEA L+W D Y+DS++ FAN IRT DGGTH+EGLK+ +TRT+N+ +K K KE+ NL GE +REGLTAV+SVKVPEPEFEGQTK RLGN EVRGIVD ++ + L + E++P+V+ +IL+KA A AA AA+ AR++VRRKS+L S+ LPGKLADC+SRDPAESEIYIVEGDSA GSAKQGRDRR QAILPLRGKILNIEK +IY+NNE+Q+LI+ALGLGIK G +F ASLRYHRI+IMTDADVDGAHIR L+LTFF+RYQR L+ERGH++IACPPLYKI +G K Y FD+ E + ++ + P + +QRFKGLGEMMP+QLW+TTM+P TR +K V ++DAA ADR+F +LMGD VAPR+EFI H++EL L DLD
Sbjct: 6 KVQASYGAEQIQVLEGLEPVRKRPGMYVGSTGPRGLHHLVYEIVDNSVDETLAGHCDVIRIFLRADGSVEVIDNGRGIPTDIHPHTGKSALETVLTVLHAGGKFGGD-SGYKVSGGLHGVGVSVVNALSAWVEVIVHRQGQVHTQRFERGVAQGQLHSEPDGSGRT-GTALRFMPDSEIFSSGIEFDYATLANRLRQLAYLNGGVRIDFTDERAEALRQGEPHCET-YHYEGGIKEYVAYMNKDKDPIHPQIIFVQR--EKDGVQVEAALQWCVDAYSDSILGFANNIRTVDGGTHIEGLKAVLTRTLNNFARKRNKRKETDSNLAGENIREGLTAVLSVKVPEPEFEGQTKTRLGNTEVRGIVDSLVGQALSEFLEFNPQVIDSILEKAIQAFNAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPAESEIYIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIEKTDDARIYKNNEIQSLITALGLGIK-----GEDFSFASLRYHRIVIMTDADVDGAHIRTLILTFFYRYQRELVERGHIHIACPPLYKIERGKKHN-YCFDEAEKERLIGAFPKNANYTIQRFKGLGEMMPKQLWETTMDPATRMMKRVMIEDAAEADRIFTILMGDKVAPRREFIETHSAELNLTDLD 651
BLAST of mRNA_S-ischiensis_contig84.20048.1 vs. uniprot
Match: K9FLW2_9CYAN (DNA gyrase subunit B n=9 Tax=Cyanobacteria TaxID=1117 RepID=K9FLW2_9CYAN) HSP 1 Score: 804 bits (2077), Expect = 4.510e-279 Identity = 415/654 (63.46%), Postives = 505/654 (77.22%), Query Frame = 1
Query: 28 SDYGAEQITVLEGLEPVRKRPGMYIGSTGTKGLHHLVFEVVDNSIDEALAGHCDTVFVTLETDGSCTVRDNGRGIPCDRHPRTGKSALETVMTVLHAGGKFGGDESGYKVSGGLHGVGVSVVNALSEFARVEVVRGGQANKMGFERGVLSEPLQVTEAPEGATSGTMVNFRPDPEIFKTTTEFELERLAGRMDELAYLNAGVRIVMTDLRSGLDEDGNPAKQKEYLHRGGVREYVDLICADKTPLHPQVKTLRATGERDGVQVEACLRWSSDMYTDSLISFANGIRTGDGGTHLEGLKSTVTRTVNSQGKKSGKLKESAGNLGGEFVREGLTAVISVKVPEPEFEGQTKNRLGNPEVRGIVDQILAEELVKVFEWDPKVLAAILDKASSAQAAAAAAKAARDMVRRKSLLASTVLPGKLADCASRDPAESEIYIVEGDSAAGSAKQGRDRRTQAILPLRGKILNIEKCASEKIYQNNELQALISALGLGIKARALCGNEFDPASLRYHRIMIMTDADVDGAHIRILLLTFFFRYQRALLERGHMYIACPPLYKITQGSKTEIYAFDQEECDEIVASLPASPKVNLQRFKGLGEMMPRQLWDTTMNPDTRKLKIVTVDDAAAADRMFRVLMGDNVAPRKEFINAHASELQLDDLD 1989
+DYGA+QI VLEGLEPVRKRPGMYIGSTG +GLHHLV+EVVDNS+DEALAG+C T+ + L DGS TV D+GRGIP D H RTGKSALETVMTVLHAGGKFGG GYKVSGGLHGVGVSVVNALSE+ V V R + + +ERG L V + T GT V+F+PD IF T EF+ LAGR+ ELAYLNAGV I TD R L + P K Y + GG+REYV+ I +K P+HP + + TGE++GVQVEA L+WS D Y+D+L+ FAN IRT DGGTHLEGLK+ +TRT+N+ +K K K++ NL GE +REGLTAVISVKVPEPEFEGQTK +LGN EVRGIVD ++ E L + +++P V+ +IL+KA + AA AA+ ARD+VRRKS+L S+ LPGKLADC+SRDPAESEI+IVEGDSA GSAKQGRDRR QAILPLRGKILNIEK KIY+NNE+Q+LI+ALGLGIK G EFD + LRYHRI +MTDADVDGAHIR LLLTFF+RYQRAL+++G +YIACPPLYK+ +G ++ Y + ++E +++LPA+ K N+QRFKGLGEMMP QLWDTTMNP++R LK V ++DAA A+R+F VLMGD VAPR+EFI + +L + DLD
Sbjct: 3 TDYGADQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALAGYCKTITIDLNADGSVTVTDDGRGIPTDVHARTGKSALETVMTVLHAGGKFGG--GGYKVSGGLHGVGVSVVNALSEWVEVTVWRNKKEHLQRYERGEAQGELSVKSGADSQT-GTSVSFKPDQLIFTETVEFDYSTLAGRLRELAYLNAGVDITFTDHRLELLKADEP-KINRYFYEGGIREYVEYINKEKQPIHPDI--IYVTGEKNGVQVEAALQWSVDAYSDNLMGFANNIRTVDGGTHLEGLKAVLTRTMNNFARKRNKRKDNEPNLAGENIREGLTAVISVKVPEPEFEGQTKTKLGNTEVRGIVDSLIGETLSEYLDFNPNVVDSILEKAIQSFNAAEAARRARDLVRRKSVLESSTLPGKLADCSSRDPAESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIEKTDDSKIYKNNEVQSLITALGLGIK-----GEEFDSSQLRYHRICLMTDADVDGAHIRTLLLTFFYRYQRALIDQGFVYIACPPLYKLERG-RSHTYCYSEQELQRGISALPANAKYNVQRFKGLGEMMPTQLWDTTMNPESRTLKKVEIEDAAEAERIFTVLMGDRVAPRREFIETYGPKLNMADLD 644
BLAST of mRNA_S-ischiensis_contig84.20048.1 vs. uniprot
Match: A0A8J7AVP8_9CYAN (DNA gyrase subunit B n=1 Tax=Romeria aff. gracilis LEGE 07310 TaxID=915328 RepID=A0A8J7AVP8_9CYAN) HSP 1 Score: 804 bits (2077), Expect = 4.510e-279 Identity = 417/654 (63.76%), Postives = 499/654 (76.30%), Query Frame = 1
Query: 28 SDYGAEQITVLEGLEPVRKRPGMYIGSTGTKGLHHLVFEVVDNSIDEALAGHCDTVFVTLETDGSCTVRDNGRGIPCDRHPRTGKSALETVMTVLHAGGKFGGDESGYKVSGGLHGVGVSVVNALSEFARVEVVRGGQANKMGFERGVLSEPLQVTEAPEGATSGTMVNFRPDPEIFKTTTEFELERLAGRMDELAYLNAGVRIVMTDLRSGLDEDGNPAKQKEYLHRGGVREYVDLICADKTPLHPQVKTLRATGERDGVQVEACLRWSSDMYTDSLISFANGIRTGDGGTHLEGLKSTVTRTVNSQGKKSGKLKESAGNLGGEFVREGLTAVISVKVPEPEFEGQTKNRLGNPEVRGIVDQILAEELVKVFEWDPKVLAAILDKASSAQAAAAAAKAARDMVRRKSLLASTVLPGKLADCASRDPAESEIYIVEGDSAAGSAKQGRDRRTQAILPLRGKILNIEKCASEKIYQNNELQALISALGLGIKARALCGNEFDPASLRYHRIMIMTDADVDGAHIRILLLTFFFRYQRALLERGHMYIACPPLYKITQGSKTEIYAFDQEECDEIVASLPASPKVNLQRFKGLGEMMPRQLWDTTMNPDTRKLKIVTVDDAAAADRMFRVLMGDNVAPRKEFINAHASELQLDDLD 1989
++YGAEQI VLEGLEPVRKRPGMYIGSTG KGLHHLV+EVVDN++DEALAG+CD + V+L DGS TV D+GRGIP D HPRTGKSALETV+TVLHAGGKFGG GYKVSGGLHGVGVSVVNALSE+ V V R + + FERG L+ + G T GT V+F+PD +IF TTTEF+ + +A R+ ELAYLNAGV + TD R L P + Y + GG+REYV I DK PLH + + ERDGVQVEA L+W SD ++D+L+ FAN IRT DGGTHLEGLK+ +TRT+N +K K K+S NL GE +REGLT +ISVKVP+PEFEGQTK +LGN EVRGIVD ++ E L + +++P V AIL+KA A AA AA+ ARD+VRRKS+L S+ LPGKLADC+SRDPAESEI+IVEGDSA GSAKQGRDRR QAILPLRGKILNIEK KIY+N E+QALI+ALGLGIK G EFD + LRYHRI +MTDADVDGAHIR LLLTFF+RYQRAL+++G++YIACPPLYK+ +G ++ Y + E E +A PA+ N+QRFKGLGEMMP QLWDTTMNP++R LK V ++DAA ADR+F VLMGD VAPR+EFI + L+L DLD
Sbjct: 3 TNYGAEQIQVLEGLEPVRKRPGMYIGSTGPKGLHHLVYEVVDNAVDEALAGYCDHIEVSLNPDGSVTVTDDGRGIPTDVHPRTGKSALETVLTVLHAGGKFGG--GGYKVSGGLHGVGVSVVNALSEWVEVTVWRDQKVHAQRFERGAPIGSLKTKKDTSGQT-GTSVSFKPDSQIFTTTTEFDYDTIAARLRELAYLNAGVDVTFTDYRLELIRADQP-RVTRYFYEGGIREYVSYINNDKQPLHDDI--IYVQSERDGVQVEAALQWCSDAFSDNLLGFANNIRTIDGGTHLEGLKAVLTRTLNVVARKRNKRKDSESNLAGENIREGLTGIISVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGEALSEYLDFNPSVADAILEKAVQAFNAAEAARRARDLVRRKSVLESSTLPGKLADCSSRDPAESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNTEVQALITALGLGIK-----GEEFDASQLRYHRICLMTDADVDGAHIRTLLLTFFYRYQRALVDQGYVYIACPPLYKLERG-RSHAYCYSDRELSERIAEFPANANYNIQRFKGLGEMMPTQLWDTTMNPESRTLKKVEIEDAAEADRIFTVLMGDRVAPRREFIETYGPRLKLADLD 644 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig84.20048.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig84.20048.1 >prot_S-ischiensis_contig84.20048.1 ID=prot_S-ischiensis_contig84.20048.1|Name=mRNA_S-ischiensis_contig84.20048.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=634bp MYIGSTGTKGLHHLVFEVVDNSIDEALAGHCDTVFVTLETDGSCTVRDNGback to top mRNA from alignment at S-ischiensis_contig84:170577..186951- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig84.20048.1 ID=mRNA_S-ischiensis_contig84.20048.1|Name=mRNA_S-ischiensis_contig84.20048.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=16375bp|location=Sequence derived from alignment at S-ischiensis_contig84:170577..186951- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig84:170577..186951- >mRNA_S-ischiensis_contig84.20048.1 ID=mRNA_S-ischiensis_contig84.20048.1|Name=mRNA_S-ischiensis_contig84.20048.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=3804bp|location=Sequence derived from alignment at S-ischiensis_contig84:170577..186951- (Schizocladia ischiensis KU_0333)back to top |