mRNA_S-ischiensis_contig84.20047.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig84.20047.1
Unique NamemRNA_S-ischiensis_contig84.20047.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
BLAST of mRNA_S-ischiensis_contig84.20047.1 vs. uniprot
Match: A0A835Z1X3_9STRA (38 kDa ribosome-associated protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1X3_9STRA)

HSP 1 Score: 573 bits (1476), Expect = 9.050e-201
Identity = 274/332 (82.53%), Postives = 301/332 (90.66%), Query Frame = 1
Query:    1 QRVLVIGGTRFSGLYLTKELHSRGHEVVLYNRGKTPNKQIPGESDEDFAKRQAEVKTIVGDRKDPDVIKATLGGEKFDAVYDMNARELGDTKPLADLFLGKVEHYVFMSSAGVYLKSETMPHREGDAVDPKSRHKGKADSEAYLEEIGMPYTSIRPTYIYGPLNYNPLEQYFFERLDQDRTVIVPGHGQHLTGLGHVQDLAEAMANVLGKDVAKGQIYNVQDNKAITFDGMVKACAEAMGKDPESVSIKHYDPKAYDFGKKKAFPMRPQHFYTSVEKAMTELGWAPKFGSVEGLKDSYENDFVHKKAAGGLKNDFECDDMVLQDERIGALLS 996
            QRVLVIGGTRFSGLYL KELHSRGHEVVLYNRGKT NKQ+PGESDE++ KR  EVKTIVGDRKD  VI+ TLGGEKFDAVYDMNARE+GDT+PLADLF GKVEHYVFMSSAGVYLKS+ MPHRE DA DPKSRH GK +SEAYLE+IGMP+TSIRPTYIYGPLNYNPLE++FFERLDQDRT+I+PGHGQHLTGLGHVQDLA AMANVLGK+VAKGQIYN+QD KAITFDGM +ACA+AMGKDP +V IKH++PK++DFGKKKAFPMRPQHFYTSV KAM +L W PKF S  GLKDSYENDFVHKKAAGGLKNDFECDDMVL  + +  LL+
Sbjct:    6 QRVLVIGGTRFSGLYLQKELHSRGHEVVLYNRGKTANKQLPGESDEEYEKRCKEVKTIVGDRKDATVIQETLGGEKFDAVYDMNAREVGDTQPLADLFNGKVEHYVFMSSAGVYLKSDLMPHREEDATDPKSRHLGKCESEAYLEKIGMPFTSIRPTYIYGPLNYNPLEEWFFERLDQDRTIIIPGHGQHLTGLGHVQDLAVAMANVLGKEVAKGQIYNIQDAKAITFDGMARACAKAMGKDPAAVKIKHFNPKSFDFGKKKAFPMRPQHFYTSVAKAMKDLEWEPKFSSEAGLKDSYENDFVHKKAAGGLKNDFECDDMVLNSDLVDVLLT 337          
BLAST of mRNA_S-ischiensis_contig84.20047.1 vs. uniprot
Match: A0A6H5JI83_9PHAE (NAD(P)-bd_dom domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JI83_9PHAE)

HSP 1 Score: 569 bits (1466), Expect = 1.550e-198
Identity = 270/332 (81.33%), Postives = 302/332 (90.96%), Query Frame = 1
Query:    1 QRVLVIGGTRFSGLYLTKELHSRGHEVVLYNRGKTPNKQIPGESDEDFAKRQAEVKTIVGDRKDPDVIKATLGGEKFDAVYDMNARELGDTKPLADLFLGKVEHYVFMSSAGVYLKSETMPHREGDAVDPKSRHKGKADSEAYLEEIGMPYTSIRPTYIYGPLNYNPLEQYFFERLDQDRTVIVPGHGQHLTGLGHVQDLAEAMANVLGKDVAKGQIYNVQDNKAITFDGMVKACAEAMGKDPESVSIKHYDPKAYDFGKKKAFPMRPQHFYTSVEKAMTELGWAPKFGSVEGLKDSYENDFVHKKAAGGLKNDFECDDMVLQDERIGALLS 996
            QRVLVIGGTRFSGLYLTKELHSRGHEVVLYNRG+T NKQ+P ESD ++AKR  +VKTIVGDRKDP+V ++ LGGEKFDAV+DMNARE+ DTK +AD+F GKV+HYVFMSSAGVYLKSE MPHRE DA DPKSRHKGK +SEAYL EIGMPYTSIRPTYIYGPLNYNPLEQYFFERLDQDRTVIVPGHGQHLTGLGHV+DLA AMANVLGK+ AKGQ+YNVQDN+AITFDGMV+ACAEAMGKDP +V IKH++P  +DFGKKKAFPMRP HF+ S EKAMT+L WAP++ +V+GL+DSYENDFVHKKAAGGLKNDFECDD VL D+ IG LL+
Sbjct:   51 QRVLVIGGTRFSGLYLTKELHSRGHEVVLYNRGQTANKQLPCESDAEYAKRMEDVKTIVGDRKDPEVCQSALGGEKFDAVFDMNAREVSDTKAVADVFKGKVDHYVFMSSAGVYLKSELMPHREEDATDPKSRHKGKFESEAYLAEIGMPYTSIRPTYIYGPLNYNPLEQYFFERLDQDRTVIVPGHGQHLTGLGHVKDLARAMANVLGKESAKGQVYNVQDNRAITFDGMVRACAEAMGKDPAAVKIKHFEPANFDFGKKKAFPMRPGHFFASCEKAMTDLDWAPEYNTVDGLRDSYENDFVHKKAAGGLKNDFECDDKVLNDQTIGNLLT 382          
BLAST of mRNA_S-ischiensis_contig84.20047.1 vs. uniprot
Match: A0A7S2XXV9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXV9_9STRA)

HSP 1 Score: 495 bits (1274), Expect = 2.290e-169
Identity = 240/328 (73.17%), Postives = 270/328 (82.32%), Query Frame = 1
Query:    1 QRVLVIGGTRFSGLYLTKELHSRGHEVVLYNRGKTPNKQIPGESDEDFAKRQAEVKTIVGDRKDPDVIKATLGGEKFDAVYDMNARELGDTKPLADLFLGKVEHYVFMSSAGVYLKSETMPHREGDAVDPKSRHKGKADSEAYLEEIGMPYTSIRPTYIYGPLNYNPLEQYFFERLDQDRTVIVPGHGQHLTGLGHVQDLAEAMANVLGKDVAKGQIYNVQDNKAITFDGMVKACAEAMGKDPESVSIKHYDPKAYDFGKKKAFPMRPQHFYTSVEKAMTELGWAPKFGSVEGLKDSYENDFVHKKAAGGLKNDFECDDMVLQDERIG 984
            +R+LVIGGTRFSGLYLTKEL  RG++V LYNRGKTP K IPGES+ED  KR A  K I GDR + + + + L GE F A+YDMN REL DTK LADL+  KVEH+V+MSSAGVYLKSE MPH EGDAVDP  RHKGK  +E YL EIG+PYTSIRPTYIYG  NYNPLEQYFFER+DQ RT+IVPG GQHLTGLGHV+DLA AMANVLGK+VAKGQIYN+QD  AI+FDG+VKACA A GKDPE V I HYDP  +DFGKKKAFPMRPQHFYTSV KAM +L W PK+ +  GLKD+YENDFVHKK AG L NDFE DD+VL+D+RIG
Sbjct:   49 ERILVIGGTRFSGLYLTKELFDRGYDVTLYNRGKTPIKAIPGESEEDLQKRIAATKIIQGDRTNAEELTSKLSGEDFYAIYDMNGRELDDTKALADLYKDKVEHFVYMSSAGVYLKSEIMPHMEGDAVDPTCRHKGKLHTEEYLAEIGLPYTSIRPTYIYGAGNYNPLEQYFFERIDQGRTLIVPGPGQHLTGLGHVKDLAAAMANVLGKEVAKGQIYNIQDVNAISFDGLVKACAVAAGKDPEDVEIHHYDPDMFDFGKKKAFPMRPQHFYTSVAKAMKDLEWEPKYNAAAGLKDAYENDFVHKKEAGTLINDFESDDLVLEDDRIG 376          
BLAST of mRNA_S-ischiensis_contig84.20047.1 vs. uniprot
Match: A0A0M0K122_9EUKA (NAD-dependent epimerase dehydratase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K122_9EUKA)

HSP 1 Score: 437 bits (1125), Expect = 3.530e-147
Identity = 208/320 (65.00%), Postives = 252/320 (78.75%), Query Frame = 1
Query:    7 VLVIGGTRFSGLYLTKELHSRGHEVVLYNRGKTPNKQIPGESDEDFAKRQAEVKTIVGDRKDPDVIKATLGGEKFDAVYDMNARELGDTKPLADLFLGKVEHYVFMSSAGVYLKSETMPHREGDAVDPKSRHKGKADSEAYLEEIGMPYTSIRPTYIYGPLNYNPLEQYFFERLDQDRTVIVPGHGQHLTGLGHVQDLAEAMANVLGKDVAKGQIYNVQDNKAITFDGMVKACAEAMGKDPESVSIKHYDPKAYDFGKKKAFPMRPQHFYTSVEKAMTELGWAPKFGSVEGLKDSYENDFVHKKAAGGLKNDFECDDMVL 966
            VL++GGTRFSGLYL +ELH+RGH V LYNRGKT  K+IP ESDE F KR+A  K + GDRKD   +KA LGG KFD VYDM  RE GDT+PL +LF  KVEH+++MSSAGVY KS TMPH E D  DPKSRHKGK ++E  L+  G+P+TSIRPTYIYGPLNYNPLE++FF RLD  + + +PGHGQHLTGLGHV+DLA AMANV+GK  A G+IYNVQD +++TF+G+ K CA AMGKD E V IK Y+ K +DFG+KKAFPMR QHF+  +++AM +L W P++   +GLKD+YENDFV KKAAG L  DF CDDM+L
Sbjct:   42 VLIVGGTRFSGLYLWEELHNRGHSVTLYNRGKTALKKIPSESDEAFEKRKAATKYVKGDRKDIADMKAKLGGLKFDVVYDMGGREAGDTEPLIELFGNKVEHFIYMSSAGVYKKSLTMPHFEVDPTDPKSRHKGKLETEDLLKAKGVPFTSIRPTYIYGPLNYNPLEEWFFTRLDAGKDICIPGHGQHLTGLGHVKDLAVAMANVIGKKAAIGKIYNVQDAQSVTFEGLAKLCANAMGKDAEEVRIKTYNKKNFDFGEKKAFPMREQHFFCGIDQAMKDLEWKPQYNMAQGLKDAYENDFVAKKAAGKLNLDFSCDDMIL 361          
BLAST of mRNA_S-ischiensis_contig84.20047.1 vs. uniprot
Match: A0A4D9CP52_9STRA (Epimerase domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CP52_9STRA)

HSP 1 Score: 432 bits (1110), Expect = 4.750e-145
Identity = 202/326 (61.96%), Postives = 255/326 (78.22%), Query Frame = 1
Query:    1 QRVLVIGGTRFSGLYLTKELHSRGHEVVLYNRGKTPNKQIPGESDEDFAKRQAEVKTIVGDRKDPDVIKATLGGEKFDAVYDMNARELGDTKPLADLFLGKVEHYVFMSSAGVYLKSETMPHREGDAVDPKSRHKGKADSEAYLEEIGMPYTSIRPTYIYGPLNYNPLEQYFFERLDQDRTVIVPGHGQHLTGLGHVQDLAEAMANVLGKDVAKGQIYNVQDNKAITFDGMVKACAEAMGKDPESVSIKHYDPKAYDFGKKKAFPMRPQHFYTSVEKAMTELGWAPKFGSVEGLKDSYENDFVHKKAAGGLKNDFECDDMVLQDER 978
            ++VL+IGGTRFSGLYL KELH RG+++ L+NRGKT N+ +PGES E +A+R  +   + GDR +PD + A     +FD +YDMN RE  DT+PLAD + G+V+H+V+MSSAGVYLKS+ MPH+E D VDPKSRHKGK ++E YL E G+P+TSIRPTYIYGP NYNPLE+YFF R+   R V VPGHGQHLTGLGHV+DLA AMA V+G++ AKGQ+YNVQ  +AITFDG V+  A+A GKDPESV I HYDPK YDFGKKKAFPMRPQHF+TSVEKAM +L W P +G+ EG +DS++ D+  +      + DFECD++VL  ++
Sbjct:   33 KKVLIIGGTRFSGLYLFKELHDRGYDITLFNRGKTANRPVPGESAESYAERIGQATFVKGDRTNPDDLAALAKAHEFDIIYDMNGREKTDTQPLADAYNGRVDHFVYMSSAGVYLKSDLMPHKETDPVDPKSRHKGKFETETYLAEKGLPFTSIRPTYIYGPQNYNPLEEYFFHRVVAGRAVAVPGHGQHLTGLGHVKDLATAMAQVIGREQAKGQVYNVQHPQAITFDGAVRLAAKAAGKDPESVKIVHYDPKEYDFGKKKAFPMRPQHFFTSVEKAMRDLDWMPAYGNTEGWQDSFDQDYALRTH----EPDFECDEVVLAGKK 354          
BLAST of mRNA_S-ischiensis_contig84.20047.1 vs. uniprot
Match: A0A0G4HZ55_9ALVE (Epimerase domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HZ55_9ALVE)

HSP 1 Score: 431 bits (1109), Expect = 1.350e-144
Identity = 206/322 (63.98%), Postives = 252/322 (78.26%), Query Frame = 1
Query:    1 QRVLVIGGTRFSGLYLTKELHSRGHEVVLYNRGKTPNKQIPGESDEDFAKRQAEVKTIVGDRKDPDVIKATLGGEKFDAVYDMNARELGDTKPLADLFLGKVEHYVFMSSAGVYLKSETMPHREGDAVDPKSRHKGKADSEAYLEEIGMPYTSIRPTYIYGPLNYNPLEQYFFERLDQDRTVIVPGHGQHLTGLGHVQDLAEAMANVLGKDVAKGQIYNVQDNKAITFDGMVKACAEAMGKDPESVSIKHYDPKAYDFGKKKAFPMRPQHFYTSVEKAMTELGWAPKFGSVEGLKDSYENDFVHKKAAGGLKNDFECDDMVL 966
            + VL+IGGTRFSGLY+ +EL  RGH+V L+NRGKT  KQIPGE+DE+F  R++    + GDR+DP+ + A L    F+ VYDMN RE  DT+PLAD+F GK+EH+V+MSSAGVYLKS++MPHREGDA DPK RHKGK D+E YL E G+P+TS RPTYI GPLNYNP+E+ FFER+D  R V VPGHG+HLTGLGHV+DLA A  NV+GKD  KG+ YN+Q  KA++FDG V+  AEA GKDP+SV I HY+PK YDFGKKKAFP RPQHF+ SVE A  +L W PK+ + +  +D Y+NDF+ KKAAGGLK DF  DDMVL
Sbjct:   51 RNVLLIGGTRFSGLYVWQELVKRGHKVTLFNRGKTALKQIPGETDEEFEHRKSSTTFVTGDRQDPESL-AQLKDMDFNVVYDMNGRERSDTQPLADMFKGKLEHFVYMSSAGVYLKSDSMPHREGDATDPKCRHKGKLDTEQYLVESGVPFTSFRPTYICGPLNYNPVEEMFFERIDAGRPVCVPGHGEHLTGLGHVKDLAVAFVNVIGKDHVKGRYYNMQCPKAVSFDGAVRLAAEAAGKDPKSVEIVHYNPKDYDFGKKKAFPFRPQHFFASVEDAQRDLNWTPKYTNKDIFEDFYKNDFLAKKAAGGLKGDFGADDMVL 371          
BLAST of mRNA_S-ischiensis_contig84.20047.1 vs. uniprot
Match: A0A7S1TDX6_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TDX6_9RHOD)

HSP 1 Score: 430 bits (1105), Expect = 3.220e-144
Identity = 203/324 (62.65%), Postives = 257/324 (79.32%), Query Frame = 1
Query:    1 QRVLVIGGTRFSGLYLTKELHSRGHEVVLYNRGKTPN--KQIPGESDEDFAKRQAEVKTIVGDRKDPDVIKATLGGEKFDAVYDMNARELGDTKPLADLFLGKVEHYVFMSSAGVYLKSETMPHREGDAVDPKSRHKGKADSEAYLEEIGMPYTSIRPTYIYGPLNYNPLEQYFFERLDQDRTVIVPGHGQHLTGLGHVQDLAEAMANVLGKDVAKGQIYNVQDNKAITFDGMVKACAEAMGKDPESVSIKHYDPKAYDFGKKKAFPMRPQHFYTSVEKAMTELGWAPKFGSVEGLKDSYENDFVHKKAAGGLKNDFECDDMVL 966
            +RVL+IGGTRFSG YL KEL   GH++VL+NR KT    +++PGE++E F   + +V TI GDR++ + + A L GE FD VYD   REL D+KPL DLF G++E YV+MSSAGVYLKS+ MPHREGDA+DPKSRHKGK ++E YL+  G+PYT+IRPTYIYG LNYNPLE++FFER+D  R V +PGHG HLTGLGHVQDLA AM  V+G + AKG +YN+QD KA+TFDG+ +ACA AMGKDPESV I HY+PK +DFGKKKAFP+RPQHF+T+ +KA++EL W+ +F + +GL+ SY+ DFV KK AG L  DFE DD++L
Sbjct:   33 KRVLLIGGTRFSGAYLAKELVDAGHDLVLFNRSKTAEGRRKLPGETEEAFLATRGQVSTIEGDRQNIEDMIAKLKGEHFDVVYDNTGRELADSKPLIDLFKGRIEQYVYMSSAGVYLKSDVMPHREGDALDPKSRHKGKFETEQYLQSEGIPYTAIRPTYIYGALNYNPLEEWFFERIDAGRPVPIPGHGMHLTGLGHVQDLATAMRAVIGNNAAKGSVYNIQDRKAVTFDGLARACAVAMGKDPESVQIVHYNPKEFDFGKKKAFPLRPQHFFTTPDKALSELNWSIEFDTEKGLQQSYQLDFVVKKQAGTLPADFETDDIIL 356          
BLAST of mRNA_S-ischiensis_contig84.20047.1 vs. uniprot
Match: A0A5J4YKX7_PORPP (Chloroplast stem-loop binding protein of 41 kDa b, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YKX7_PORPP)

HSP 1 Score: 425 bits (1092), Expect = 5.340e-142
Identity = 208/327 (63.61%), Postives = 245/327 (74.92%), Query Frame = 1
Query:    1 QRVLVIGGTRFSGLYLTKELHSRGHEVVLYNRGKTP----NKQIPGESDEDFAKRQAEVKTIVGDRKDPDVIKATLGGEKFDAVYDMNARELGDTKPLADLFLGKVEHYVFMSSAGVYLKSETMPHREGDAVDPKSRHKGKADSEAYLEEIGMPYTSIRPTYIYGPLNYNPLEQYFFERLDQDRTVIVPGHGQHLTGLGHVQDLAEAMANVLGKDVAKGQIYNVQDNKAITFDGMVKACAEAMGKDPESVSIKHYDPKAYDFGKKKAFPMRPQHFYTSVEKAMTELGWAPKFGSVEGLKDSYENDFVHKKAAGGLKNDFECDDMVLQ 969
            +RVLVIGGTRFSGLYLTK L   GHEVVL+NRG  P    +  +PGE+   F  R      IVGDR D   +   L GE FDA++D N REL D+KPL DLF GK+E Y++MSSAGVY KS+ MPH E DAVD KSRHKGK D+E +L++ GMPYT+IRPTYIYG LNYNPLEQ+FFERL   R V VPGHGQHLTGLGHV DLA+AM+  LG   A G++YN+QD +AITFDGMVKACA AMG DP++V I HY+PK +DFGKKKAFP RP HF+TS   A+++L W  ++    GLKDSY NDFVHK+ AG LKNDF  DDMVL+
Sbjct:   45 KRVLVIGGTRFSGLYLTKVLADAGHEVVLFNRGSKPVGDKSLMVPGETQAQFEARNKNTSVIVGDRTDAAQMTELLKGETFDAIFDNNGRELADSKPLIDLFNGKIEQYIYMSSAGVYAKSDIMPHLETDAVDLKSRHKGKLDTETFLKQSGMPYTAIRPTYIYGALNYNPLEQWFFERLAAGRPVPVPGHGQHLTGLGHVMDLAKAMSACLGNPKAIGKVYNIQDEQAITFDGMVKACATAMGLDPDAVEIVHYNPKEFDFGKKKAFPCRPVHFFTSPRNALSDLDWTVEYNIQAGLKDSYSNDFVHKQKAGKLKNDFSTDDMVLE 371          
BLAST of mRNA_S-ischiensis_contig84.20047.1 vs. uniprot
Match: A0A0G4GEP5_VITBC (Epimerase domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GEP5_VITBC)

HSP 1 Score: 421 bits (1082), Expect = 2.610e-140
Identity = 201/333 (60.36%), Postives = 255/333 (76.58%), Query Frame = 1
Query:    4 RVLVIGGTRFSGLYLTKELHSRGHEVVLYNRGKTPNKQIPGESDEDFAKRQAEVKTIVGDRKDPDVIKATLGGEKFDAVYDMNARELGDTKPLADLFLGKVEHYVFMSSAGVYLKSETMPHREGDAVDPKSRHKGKADSEAYLEEIGMPYTSIRPTYIYGPLNYNPLEQYFFERLDQDRTVIVPGHGQHLTGLGHVQDLAEAMANVLGKDVAKGQIYNVQDNKAITFDGMVKACAEAMGKDPESVSIKHYDPKAYDFGKKKAFPMRPQHFYTSVEKAMTELGWAPKFGSVEGLKDSYENDFVHKKAAGGLKNDFECDDMVL----QDERIGAL 990
            +VL+IGG+RFSGLYL +EL  RGH+V ++NRGKT  + IPGES  +F +R++  K + GDRK+   ++  +   +FDA++DMN RE+ +TK L DLF  +++HYV+MSSAGVYLKS+ MPHREGDAVDPK RHKGK DSE YL  I  P+TSIRPTYIYGPLNYNP+E+YFFERL Q+R V +PGHGQHLTGLGHV+DLA   ANVLG+  A G+ YN    +A+TFDG+ + CA AMGKDP  V + HY+PK  DFGKKKAFP RPQHF+TS+E A+ +L W P + ++EGL+DSY+NDFV K+  G LKNDFE DD+VL    +D R+  L
Sbjct:   57 KVLLIGGSRFSGLYLWRELLDRGHDVTVFNRGKTALRPIPGESASEFERRKSSTKFVTGDRKNLADLRQ-VASMQFDAIFDMNGREVDETKMLVDLFPNRLKHYVYMSSAGVYLKSDEMPHREGDAVDPKCRHKGKLDSEEYLRSINAPWTSIRPTYIYGPLNYNPVEEYFFERLAQNRPVCIPGHGQHLTGLGHVRDLARQFANVLGRPHAVGKTYNAGGLEAVTFDGVARLCAAAMGKDPSRVELVHYNPKDLDFGKKKAFPFRPQHFFTSIENAIRDLDWLPDYDNLEGLRDSYQNDFVIKQREGKLKNDFETDDIVLAAAKRDTRVPTL 388          
BLAST of mRNA_S-ischiensis_contig84.20047.1 vs. uniprot
Match: A0A7S1U117_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U117_9STRA)

HSP 1 Score: 415 bits (1067), Expect = 6.080e-138
Identity = 205/326 (62.88%), Postives = 242/326 (74.23%), Query Frame = 1
Query:    1 QRVLVIGGTRFSGLYLTKELHSRGHEVVLYNRGKTPNKQIPGESDEDFAKRQAEVKTIVGDRKDPDVIKATLGGEKFDAVYDMNARELGDTKPLADLFLGK----VEHYVFMSSAGVYLKSETMPHREGDAVDPKSRHKGKADSEAYLEEIGMPYTSIRPTYIYGPLNYNPLEQYFFERLDQDRTVIVPGHGQHLTGLGHVQDLAEAMANVLGKDVAKGQIYNVQDNKAITFDGMVKACAEAMGKDPESVSIKHYDPKAYDFGKKKAFPMRPQHFYTSVEKAMTELGWAPKFGSVEGLKDSYENDFVHKKAAGGLKNDFECDDMVL 966
            ++VL+IGGTRFSG YL KELH RGHEV LYNRGKT    +PGE+  DF  R    + +VGDRK+ + +   +G   FD  YDMN RE  DT+PL    LGK    +EH+V+MSSAGVYLKSE MPH EGD VD  SRHKGK  +E  L   GMP+TSIRPTYIYG  NYNPLEQYFFER+  +R V VPG+G HLTGLGHV+DLA AMANV+GK  A G++YNVQD+ AI+FDG+VKACA A GKDPESV I HYDPK ++FG KKAFP+RPQHF+T +E A  +L W P F +V+GLKD+YENDF  K   G L  DFECDDM+L
Sbjct:   25 KKVLLIGGTRFSGAYLWKELHDRGHEVTLYNRGKTKIVPVPGETPRDFEARVKGTRYLVGDRKNANELMEKVGSHSFDVCYDMNGREAADTEPLVAA-LGKGSPMLEHFVYMSSAGVYLKSEKMPHVEGDEVDYSSRHKGKLATEEMLAARGMPWTSIRPTYIYGAQNYNPLEQYFFERIHANRPVCVPGYGGHLTGLGHVKDLAVAMANVIGKPAAVGKVYNVQDDVAISFDGLVKACAAAAGKDPESVEIVHYDPKEFNFGNKKAFPLRPQHFWTDIEAARKDLDWEPTFDTVKGLKDAYENDFCIKVNEGSLPGDFECDDMIL 349          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig84.20047.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z1X3_9STRA9.050e-20182.5338 kDa ribosome-associated protein n=1 Tax=Tribone... [more]
A0A6H5JI83_9PHAE1.550e-19881.33NAD(P)-bd_dom domain-containing protein n=2 Tax=Ec... [more]
A0A7S2XXV9_9STRA2.290e-16973.17Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A0M0K122_9EUKA3.530e-14765.00NAD-dependent epimerase dehydratase n=1 Tax=Chryso... [more]
A0A4D9CP52_9STRA4.750e-14561.96Epimerase domain-containing protein n=3 Tax=Monodo... [more]
A0A0G4HZ55_9ALVE1.350e-14463.98Epimerase domain-containing protein n=1 Tax=Chrome... [more]
A0A7S1TDX6_9RHOD3.220e-14462.65Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A5J4YKX7_PORPP5.340e-14263.61Chloroplast stem-loop binding protein of 41 kDa b,... [more]
A0A0G4GEP5_VITBC2.610e-14060.36Epimerase domain-containing protein n=1 Tax=Vitrel... [more]
A0A7S1U117_9STRA6.080e-13862.88Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig84contigS-ischiensis_contig84:125244..135118 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score437.6
Seed ortholog evalue4e-120
Seed eggNOG ortholog2880.D8LDG3
GOsGO:0000427,GO:0000428,GO:0001101,GO:0001871,GO:0003674,GO:0003676,GO:0003677,GO:0003723,GO:0005488,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005777,GO:0005840,GO:0005911,GO:0005975,GO:0005996,GO:0006139,GO:0006355,GO:0006364,GO:0006396,GO:0006412,GO:0006417,GO:0006518,GO:0006725,GO:0006807,GO:0006950,GO:0006952,GO:0006996,GO:0007154,GO:0007623,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009266,GO:0009409,GO:0009414,GO:0009415,GO:0009506,GO:0009507,GO:0009526,GO:0009532,GO:0009536,GO:0009570,GO:0009605,GO:0009607,GO:0009611,GO:0009617,GO:0009628,GO:0009657,GO:0009658,GO:0009889,GO:0009891,GO:0009893,GO:0009941,GO:0009987,GO:0009991,GO:0010035,GO:0010287,GO:0010297,GO:0010319,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0016020,GO:0016043,GO:0016070,GO:0016072,GO:0019219,GO:0019222,GO:0019538,GO:0022613,GO:0030054,GO:0030246,GO:0030247,GO:0030880,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031668,GO:0031967,GO:0031975,GO:0032268,GO:0032270,GO:0032544,GO:0032991,GO:0033554,GO:0034248,GO:0034250,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042221,GO:0042254,GO:0042579,GO:0042631,GO:0042742,GO:0043043,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045893,GO:0045935,GO:0046483,GO:0048046,GO:0048511,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0051252,GO:0051254,GO:0051704,GO:0051707,GO:0051716,GO:0055044,GO:0060255,GO:0061695,GO:0065007,GO:0070887,GO:0071214,GO:0071229,GO:0071462,GO:0071496,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0098542,GO:0104004,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901700,GO:1901701,GO:1902494,GO:1902680,GO:1903506,GO:1903508,GO:1990234,GO:1990904,GO:2000112,GO:2001141
EggNOG free text desc.NAD dependent epimerase/dehydratase family
EggNOG OGs2CMCJ@1,2QPZ0@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog description38 kDa ribosome-associated protein precursor
Ec32 orthologEc-15_000730.1
Exons9
Model size1746
Cds size753
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817334.5885324-UTR-S-ischiensis_contig84:125243..1259901622817334.5885324-UTR-S-ischiensis_contig84:125243..125990Schizocladia ischiensis KU_0333UTRS-ischiensis_contig84 125244..125990 -
1695741035.5929124-UTR-S-ischiensis_contig84:125243..1259901695741035.5929124-UTR-S-ischiensis_contig84:125243..125990Schizocladia ischiensis KU_0333UTRS-ischiensis_contig84 125244..125990 -
1622817334.683094-UTR-S-ischiensis_contig84:133599..1336471622817334.683094-UTR-S-ischiensis_contig84:133599..133647Schizocladia ischiensis KU_0333UTRS-ischiensis_contig84 133600..133647 -
1695741035.6961055-UTR-S-ischiensis_contig84:133599..1336471695741035.6961055-UTR-S-ischiensis_contig84:133599..133647Schizocladia ischiensis KU_0333UTRS-ischiensis_contig84 133600..133647 -
1622817334.6941855-UTR-S-ischiensis_contig84:134829..1349491622817334.6941855-UTR-S-ischiensis_contig84:134829..134949Schizocladia ischiensis KU_0333UTRS-ischiensis_contig84 134830..134949 -
1695741035.708684-UTR-S-ischiensis_contig84:134829..1349491695741035.708684-UTR-S-ischiensis_contig84:134829..134949Schizocladia ischiensis KU_0333UTRS-ischiensis_contig84 134830..134949 -
1622817334.7050512-UTR-S-ischiensis_contig84:135040..1351181622817334.7050512-UTR-S-ischiensis_contig84:135040..135118Schizocladia ischiensis KU_0333UTRS-ischiensis_contig84 135041..135118 -
1695741035.7242277-UTR-S-ischiensis_contig84:135040..1351181695741035.7242277-UTR-S-ischiensis_contig84:135040..135118Schizocladia ischiensis KU_0333UTRS-ischiensis_contig84 135041..135118 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817334.6000197-CDS-S-ischiensis_contig84:125990..1260711622817334.6000197-CDS-S-ischiensis_contig84:125990..126071Schizocladia ischiensis KU_0333CDSS-ischiensis_contig84 125991..126071 -
1695741035.6068614-CDS-S-ischiensis_contig84:125990..1260711695741035.6068614-CDS-S-ischiensis_contig84:125990..126071Schizocladia ischiensis KU_0333CDSS-ischiensis_contig84 125991..126071 -
1622817334.6114733-CDS-S-ischiensis_contig84:127125..1273101622817334.6114733-CDS-S-ischiensis_contig84:127125..127310Schizocladia ischiensis KU_0333CDSS-ischiensis_contig84 127126..127310 -
1695741035.6157331-CDS-S-ischiensis_contig84:127125..1273101695741035.6157331-CDS-S-ischiensis_contig84:127125..127310Schizocladia ischiensis KU_0333CDSS-ischiensis_contig84 127126..127310 -
1622817334.6227179-CDS-S-ischiensis_contig84:128787..1288571622817334.6227179-CDS-S-ischiensis_contig84:128787..128857Schizocladia ischiensis KU_0333CDSS-ischiensis_contig84 128788..128857 -
1695741035.6251938-CDS-S-ischiensis_contig84:128787..1288571695741035.6251938-CDS-S-ischiensis_contig84:128787..128857Schizocladia ischiensis KU_0333CDSS-ischiensis_contig84 128788..128857 -
1622817334.6358888-CDS-S-ischiensis_contig84:129414..1295211622817334.6358888-CDS-S-ischiensis_contig84:129414..129521Schizocladia ischiensis KU_0333CDSS-ischiensis_contig84 129415..129521 -
1695741035.6418064-CDS-S-ischiensis_contig84:129414..1295211695741035.6418064-CDS-S-ischiensis_contig84:129414..129521Schizocladia ischiensis KU_0333CDSS-ischiensis_contig84 129415..129521 -
1622817334.6464264-CDS-S-ischiensis_contig84:130741..1308271622817334.6464264-CDS-S-ischiensis_contig84:130741..130827Schizocladia ischiensis KU_0333CDSS-ischiensis_contig84 130742..130827 -
1695741035.6556861-CDS-S-ischiensis_contig84:130741..1308271695741035.6556861-CDS-S-ischiensis_contig84:130741..130827Schizocladia ischiensis KU_0333CDSS-ischiensis_contig84 130742..130827 -
1622817334.6578252-CDS-S-ischiensis_contig84:131306..1314041622817334.6578252-CDS-S-ischiensis_contig84:131306..131404Schizocladia ischiensis KU_0333CDSS-ischiensis_contig84 131307..131404 -
1695741035.6673687-CDS-S-ischiensis_contig84:131306..1314041695741035.6673687-CDS-S-ischiensis_contig84:131306..131404Schizocladia ischiensis KU_0333CDSS-ischiensis_contig84 131307..131404 -
1622817334.6718073-CDS-S-ischiensis_contig84:133473..1335991622817334.6718073-CDS-S-ischiensis_contig84:133473..133599Schizocladia ischiensis KU_0333CDSS-ischiensis_contig84 133474..133599 -
1695741035.681262-CDS-S-ischiensis_contig84:133473..1335991695741035.681262-CDS-S-ischiensis_contig84:133473..133599Schizocladia ischiensis KU_0333CDSS-ischiensis_contig84 133474..133599 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig84.20047.1prot_S-ischiensis_contig84.20047.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig84 125991..133599 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig84.20047.1

>prot_S-ischiensis_contig84.20047.1 ID=prot_S-ischiensis_contig84.20047.1|Name=mRNA_S-ischiensis_contig84.20047.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=251bp
MNARELGDTKPLADLFLGKVEHYVFMSSAGVYLKSETMPHREGDAVDPKS
RHKGKADSEAYLEEIGMPYTSIRPTYIYGPLNYNPLEQYFFERLDQDRTV
IVPGHGQHLTGLGHVQDLAEAMANVLGKDVAKGQIYNVQDNKAITFDGMV
KACAEAMGKDPESVSIKHYDPKAYDFGKKKAFPMRPQHFYTSVEKAMTEL
GWAPKFGSVEGLKDSYENDFVHKKAAGGLKNDFECDDMVLQDERIGALLS
*
back to top

mRNA from alignment at S-ischiensis_contig84:125244..135118-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig84.20047.1 ID=mRNA_S-ischiensis_contig84.20047.1|Name=mRNA_S-ischiensis_contig84.20047.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=9875bp|location=Sequence derived from alignment at S-ischiensis_contig84:125244..135118- (Schizocladia ischiensis KU_0333)
CAGCGCGTCCTCGTGATCGGCGGGACCCGCTTCAGCGGGCTGTACCTGAC CAAGGAACTGCACAGCCGGGGACACGAGGTGAAGGATCCCGCGCTGCGAG CAGGTTGCGTACCGCACGTGCGACACCGCAGGCTTGGCACGACGGCTGAC CCGCCCCCTTCTTCTACAGGTCGTGCTGTACAACCGTGGCAAGACGCCCA ACAAGCAGATCCCCGGGGAAAGCGATGAGGACTTCGCGAAACGGCAAGCG GAAGTGAAGACTATCGTGGGCGACCGCAAGGACCCGGACGTAAGTCTACG AACACGTACAGACTGTAGGTTTGGCCTTTTTTGCTCAGGCAATTGCACAT TGCTGGCACGCCGGCAAAATCGCTCTTGCGTTTGCTGCGAGCGTGTGGGT GCAGGCCGCGAGGTTCTGCAACGCTGGCTCACACTGTGGTTATAGTGGGG AATGGCCGTGCTGACACTAGTGAGGGGAGGCGGCTGCAGCAGCCCCTTCC AGCCCTCCTGCGGCTGCATATGCCAACCAAGCACCACCAGTTCCGCATTT GGCCACTGTGTGAGAACCCTCCTCATACATATCAAAGGGCGACACCAGCT AGCGCTGAGGCTACTGCCAATATTGGTTTTGTAGGAGCGGTGAGTGCGGC CGACGCGCGTACACGTGCGACCGTTGATGGACTCAGCTCGCCCCTTACGT TGCTTCAAAGCAGAAGAGTTACTGTACTTAGAACCCCGCGCTACTGTCAG CCCAATACTGAGCGCTCCGCCGTCAAGTTAACGCGGTCGTATGTGGGCAC CAGTAGTGGCCGAGAGTACACAGGAAGTGCGTAAATACTACAGCAGTAGT TACTCAGACTCAAGCGGGCCTGCCTCGATACTTCTGAGTTATATGCTAAA GGGTCAGCTAGATGGCTACTCCCGTCGGAGGGCGAGGCACACCGTCCCAA GTTTTGACTCCGGGCTGTGTCAGCAATGGCACGCAAGGTTATGTCGCACG ACAAGCCAACGCGTTCCTGCACGTATGTGCTTCTACATTTTTAACGGGAA CAACACAGGGCGAGGTGCAGGCCACATCACTAAAACCTCAGCAGTGGCCC TTCCTTCAAAGGTTGACGAAGCAACAGATATTTGTGCGCCCTGAAATGTT TACAGGTGATCAAGGCGACCCTCGGGGGGGAGAACTTCGACGCTGTGTAC GACATGAACAATTGGTAGCGAGTACACACATATACAATGCTTCCAAGTGC TTGCTCGAGTGCTTCAAAGTATAAAGACGAAGATTGACGAAGCAAGGCAC GCACCGAACCGAAATGTAACCGTTTGCAGGTGATCAGGGCGACCCTAGTT CAACGCGGTGTACGACATGAACAATGAGTACACACGTACTTCCAAGTGCT TGCTCGAGTATAGGTACAAGTATATAGACAATGGCTGACGAAGCAAGCTA ATAAACTTATTGCTATTGCAGGTGATCAAGGCGACCCTGGGGGGGGAGAA GTTCGACGCGGTGTACGACATGAACGCGCGCGAGCTGGGCGACACCAAGC CTCTGGCGGACCTGTTCCTGGGCAAGGTGGAGCACTACGTATTCATGAGC TCCGCCGGAGTGTACCTCAAGTCGGAGACCATGCCGCACCGCGAGGTGGG TGTATATGTATGTATATGTACTCATTGGCTTTGTTGTTTTGCGACGGAAC CCTTAACTACTTTGGTATCCTGAAACTCAATCCGCGAACTTCTTGGGTTC TCGAAACTCAAGTCTCCCCAACTACTACTGTAGTATATTCGTACCTCATT GGCTGGCCTTGCGACATAACCTTGGGTGCATTGCCGGCAGCCGTACGTCG AAACTTCGGCGGGTGTACTGCCCTCCGACAGGAATAGCTATTTAGCGATT GACTCTGCCAGGGGAGGGAGGGGTCCTGCTCCGTCTCGAACGAGGCGTGT GGTCAATGGTCTCGGGACTACGGCAAGCACCACGTGAGTACATATATATA CTCTCGCATCCCAACTATGTAGGCCAAAACAGGTGGCCGTATACACAGTT GTTCGAGGCACTTGGAGTATATTCAATGCACTACTAGGGGAGGCCCCCCC CCCACCCGGACTCTCGCGAGTCGGGGAAGGGGGGGTGTATTGACTTGGCC ACCCCCCCGGCTCTGGCAGGGGGGTGGCCACCCCCTCCCACCCTGGCTCT GCCAGGGGAGGGAGGGGTCCTGCTCCGTCTCGAACGAGGCGCATGGTCAA TGGTCTCGGGACTACTGCAAGCACCACGTGAGTACATATATATATACTAC TGTACAGTAGTGAGGTGCCGTAAGTGCCTATGACAGACGAACGGCGGACC GCTGTAGGCTGGCGTTATTTTCGCTTTGTGCCTCGAGCGAGGGGGTGAGG GAGGGAGCAGGGGAGGGGAGGGGAGGGAGGGATGACCACACAAGGCAGCA GGGGGGGCAGGGGTAGGGGAATGGGGCAACGGGTTGAGGGAGGGAGGGAG GGAGAGATGACTACACTCTGATGCTGTTGAACACCGGTAGCCTGGGTCGG TAAATCGATGTTCACTTGACCTCAGAAGCCGCCCCCGCCACTAGCCCTGG CCCCATTCCGGAAAGTACTTAGGCAACCCCAGTCTCTCCCTGAGACCCTG CCACTGCTTCCCCCTACCCCTGGCTTCTGTCGCGCCATGAGGCACTTGCA GCACGCCAATGCCTATAGCCCTTGTAGGAAGACTGGACTGCCGTGAGGCA GGAGCTCGTGCTGGATGAGAAAGGGAACTGGCATTGGGGTGCGTGAAACA TATCGGGGAAAGGCCTCTGACTGCCTGGAGAGGCAGGAGGAATAGCAGGT TCTCTAATGGCTCTAATCACCCTGCTTTGATGTGATGATCACTACAGTAG TACTACGTACAATAGCATTCAATTCTGAAATGAAAAAACTACTAATACGA GAACACTCAATCACACACGTGCAATTGTACCTCGTTACAATATCCATAGC ATATGAATAACCCGAGCTTTACTTACCTCTGCCCCAAAGCAGGGTGACGC GGTGGACCCCAAGTCCACTACTACAGTCGGGGCCACCAGTAAGTTCCGAA AAAACTTCAACTTCAACGTGCTGACCTTCAACTTGAGATTTGTTCTGAAG GCTGAGGTACAAGGCTTTGACGTGATACCTTTCAGATGAAGCTGTCAGAC GTGAGGGTGTCTCGTCACCACGACACACCCTCGGCGCAGCATGCGCCGCG CAGCAGCGAGTGGTTTTCTGGAGAGTAAATTAGATTTACACCTGCATGCA CCTTGGACGGCGTGTGCCTGTACTAGAAGCTTGGAACCGCGGCCATTAAA CGCCTCCGCATATCTACCAAAACTCGCCGTAACTGCTCCGAAGTACTCGA GTCTATCCCAAACGACCAGTACCACGCAATGCACTGTTACGTACTGTGCT CCTCTCCCTGTGAGCCTGCAATCGACCTACTGTAATGTCGAGTCGCACTG CCACAAAGCTTGACAGAAGCGGCCAGTTATTCGGTGAGTTGAACAAAACG TCAGGAAAGAGCATACTCAATCGTTTCTCTTAAAGGCCAAAGGAACTTAC TAGTACCACCTACTATAGAAGTACGAGAACACTACACTACGAGAACACTC ACTCTCACACATGTGCGATTGTACCTCGCTACAATTTATATGAATCACAT CTGCCCCGAACCAGGGGGACGCGGTGGACCCCAAGTCCCGCCACAAGGGC AAGGCCGACAGCGAAGCCTACCTGGAGGAGATCGGCATGCCCTACACCTC CATCCGGCCCACGTGAGCTGGGGGAGGGGGGGCTTTTGAGTTGCTTGCCG TGGCCACAGGGGTCTACTTCAAAGTATCATATTGACCATTGACCGTGTGT CCCACAGAGGAGACCTTGCATGTGATGTGATGTGACGTGATGTGATGTTG TGGGGCTCCAGTACTGTAGTGGGACGTAAAATTTCATCGTCACATCACAC AGGGTCTCCCTGTGGCTGTAGCCAGCCTCCCCAACAACAAAGGACACAGC CCTCTGTCCCACAGTGTCACCCCCCGTGAAGCGTGTGGCCAATGGCCACA CCAAGTATGGCTAGGGCAGGCAACTCATGAGTACACCGGGTTGGCATTTA ACCCCTAAGTAAGTGGTGCCCTTTTAGACCCTTGATTAGAGTTAGTTAGG GGTAATTAGACCTAAAATGAAGTCTAATCCTAATTAGCCTCCAAGCGCCA ACCCTGCATGGGTACACCCCCTCTGTGCCGCTACTCTGCAGCTACATCTA CGGGCCCCTGAACTACAACCCGCTGGAGCAGTACTTTTTTGAGCGGCTGG ACCAGGACCGGACCGTCATCGTCCCCGGTGAGAAAAAAGAAGGGGAGAAC ACCAGTGGAGGAATATTGATCAGTAGATAGTTATCGGGCTCGACTGATTT TGTGGGTGGCATTGCTAAGCAGCTACTTGGAATTACGTTGATTCGGTGCT TCTTTGAGCGGCTGGACCAGGATCGGACCGTCATCGTCCCCGGTGAGAAA GAAGGGGAGAAAACAGAATGAGTGCCCATCGGAGGGAGAGAGACGTATGC GCGAGCAATCTATGTGAAACTATTTGGAAGGCTCAAGGCGCACTCCCGCT GCGTGGCCGTGGACAGGGGCGTGAGGCTCAGGTTTTGCTACAGTACAGTA CAGCACTCAATAACCCTAAGTGATTAACCCTAGGCCCTCGCCGCGGTGTT CCCAATGACTGGACCGTCATCGTCCCGGGTGAGAGAAAGAAGGGGAGAAA AGTTACACAGATTGATGGCCCATCGGCGGGCAGTGATGGAATATCGATCA GGAGACAGTTATCAGGCAGGGGAGAACAGTTGAACAGATTGATGGCCCAT CAGCGGGCAGTGATGGAATATCGATCAGGAGACAGTTATCGGGCTCGACT GCTTTTGTGGGTGGCGTTGCCAAGTAGCTACTTGGATTTAGTGTGGGTCA AACTATCGAATATCGACTATCGAGAGACATAGTGAGCACAAGAGAGTTCC CTGCGCCTCGTCCCTTTCCTCACCCCGCCCTTTTCTTCTTTATTTTTTGT TTTCTTTTTGCCTTGCGAGGGGAAGAAGGTCTTCGTTGAGTCCTGTTTTG GGACGAGCCTTTTGGCACGGGGCCTGGAACTCGCCGCTTATCAACCACTC AATGTAGATCGGTACTGTCGATAAATAGGTTGATTTTTGCTTAGATTTTC CATCACTGATCCGAGGGAGAGAGGCGTTTCCTCCCTCGCAGAGGCAGCCT CTGGCGGGCCAGTGACGGGATGGTCGTTTGACTCTTGTTGTGCAGTAGTA GAGCTCTAAGCAGCCATCTAGATAAAAGACGATGTGGAACACTGCGGGCG TTTGTAGCAATGGTTGATGCCGCATCTGTGCGTGCACGTGTTTGCAGGGC ACGGCCAGCACCTGACGGGCTTGGGGCACGTGTATACTACTCTGCGAGTA CTGCAAGTACTTCGAAGTACTTGAAGTACTTCCAAGTACCACAATTGATG CCATACAATATCTGTGCGTGCACGCCTTTGGGACAACGCGTTCGCAGGGC ACGGCCAGCACCTGACGGGCTTGGGGCACGTGCAGGACCTGGCGGAGGCC ATGGCCAACGTCTTGGGGAAGGACGTTGCAAAGGGGCAGATTTACAACGT TCAGGTGAGGAGCTGCTGCTGCCGATGGTAACTACTTGGATTCTTTGAAG CTCATTCTCCTAACTACTTGGATTGTTTGAAGCTCATTCTCCTAACTTGG GTTTTTTACCAACGCCTTGGGGAAGGACATCGCAAAGGGGCAGATTTGCA ACGTTCAGGTGAGTTGCTGCTGCTGTTGCCGCCGCCGCCGCCGCCGCCGC TGCTGCTGCTGCTGCTGCTGCTGCTGATGGTGATGATGATGGCAACGGTG ATGATGATCACATTGCTGTTGCTGCTGCTGCTGCTGCTGCTGATGGCAAT GGCGATGATGATCATATTGCAGTTGCTGCTGCGCTTTGTGTACAAGTGCC CCCCTTTTTCCAGCAAGCACTGCGTACTTGCAGCAGTATAGCTCTGCTTC TACTTGCCGGGAGCTCTGCGTGATAAGCATCAATGCGCTGACCTAGCAGA CGACGCGCGTCGAACGAGCGCCTGCCCGTCACAGGACGACAAGGCCATCA CCTTCGACGGCTAACCCTAGCCCTAGCTTAGCCTAACCCTACTTAACCCT GCCCGTCACAGGACAACAAGGCCATCACCTTCGACGGCATGGTGAAGGCG TGCGCGGAGGCCATGGGCAAGGACCCCGAGAGTGAGCGCAAGGGGGTGAT TGCTTCTGGGCCTGTTGAATGAACGAATCCCTCAGGGCACGCAGCGCTAG ACCATGTACTTTGAAGTACTTCGAAGTGCTACTCTACTGCACGTACTTCG TAAGTACTTGAGTGCTTGTCATACTCTGCATGGGTAGAGTAATATAGCAC TTTGACTGCCCGTGTGTTTCAGTTGTGACCTGCCAAGAGTTGTAATACTG TACTGTAGGTAAATCTAGGTACTTGAGTGCTTATCATACTCTACATGGGT AGAGTAATGTGCTTGTAGCAAGTTGACTGCTCGTGTGGTTTTTCAGTTGT GACCTGCCACGAGCTGAGTTGTGCTGTTTACAAGCACTTGTACTTCGCAG TAGAGTACACGGCAGATATTGTTTGGGTGTGTGCTCATTCATGCACCGCC CATGTGTCCGTCCATTCATATCTGCCTGCCTGTGCGTGCCGGCCTACCTG GTGCCTGGCTGCCTGGCTGCCTGCCTGCCTGTGTGCCTGCCTGCCTGCCT GCCCGCGTGCCTGCCTGCCTGCTTGCCTGCCTGCGTGCCTGCCTGCCTGC CTGTGTGCCTGCCTGCCTGCGGACCTACATGCCTGCCTGTGCTACCTGCC TGCCTGTCTACCTGTCCGCCTGCCTGCCGGCCGGCCTGTGCCTGTCTGCC TGCCTTCCTGTGCCCGTCTGTCCTATTTGCTGATCCCCATGCCCATCTGC CCACACCCGTCCGCCTGCCGCTCCCGGTCCGTCTGCCCGTCGCCAGTGCT GGAATATCCAAGCAAATCAACCTATTTATCGACAGTACTGATCTATTTGG AGTGGCACATAAGCGGCAGACCTGATTTTCAATTTGTTTGATGAATGCGA GTTCCGGGGCCCGTTCCTACAACCTAGGGTGGGGACCTCACCAGAAGCAC TTCTTTTCACCCGCATGGCACAAAAATCAAGAAAAGAAGTCACTAAGGGG GGCAATGCAGGGGCACTACAGGGGCAATGTAGGGGGGTCTCTCTCGTGCC GCGTTGCGGGACGTACCTGTAGGAGCACTGATCTATATATCTATTGATAG TCGATACTCGATAGTTTGACCCACAACAAAGCCAAGTTTTTTTTTTGCAG GAAGATGAAAAGCGAGTGGGAAAGAGGAGGTGTTCCCACTTTCGTGAGTT CAGTATGTAGTATTAACAGGAGCAACACGGGGCGAGTATGTAGTAAGTAA ACGCCACCCAATTTAATCAGTCGAGCCCGATAGCTATCTACTGTACTGAT CGATATCCCATCACTGCCTGTCGCCCGGTCGTTTGCACCACGGATGGCAG GTGTATCCATCAAGCACTACGACCCCAAGGCGTACGACTTTGGCAAGAAG AAATCAACCTATTTATCGAGAGTAGGTACTGATCTACAGTATATATATAT ATATATATCGATGGTCGATATTCGATAGTTTGACCCACAATAAATCGGAT GATGGCAGGCGTGTCCATCAAGCACTACGACCCCAAGGCGTACGACTTTG GCAAGAAGAAGGCCTTCCCGATGCGCCCGCAGCACTTCTACACCAGCGTG GAGAAGGCGATGACGGAACTCGGCTGGGCGCCCAAGTTCGGCAGCGTGGA GGGGCTCAAGGACTCCTATGAGAACGACTTTGTCCACAAGAAGGCGAGCA ATATACAAAGTATATATACTCTATGCGAGCAATATATATATATATATATA TATATATATATATATATATATATATATATATGCACTGCTGAGGTCCCTAG TGACGTGGCCCGCACCTCGCCCCGTGTTTTTCCTGTTAATACTACGTATT TGATCATGTCAAATCTATGTACTGTCCACCGCGATCAACAAGTTCGGCAG CGTGGAAGGCCTGAAGGACTCGTACGAGAATGACTTTGTCCACAAGAAGG CGGGCAATATACATATATAAGAAGGATAGATATATATATATATATATATG CGAGCAATGTATATACTCGAGTACTGCAGTACGTATATGATCATGTCAAA TCTATGTACTGTCCACCGCCATCAACTTACCCAAGTTCTGCAGCGTGGAG GGCCTCAAGGACTCCTACGAGAACGACTTTGTCCACAAGAAGGCAAGCAT TGTCATTTCAAATCTACTGTGATTCATCCACATTGTACGAAGTAACGAGG TACAATCGCACGTGTGTGAGATTCAGTGTTCTTGTATTTGTGGTTATCAC AATTAAGAGTTGAGTTTTCTTATATTACTGTAGTGGCTATCAAATCAAAG ATTTGGTCATGTCAAATCTACTCTCCACTGTGATCAGCTTACCCTGTGCA CAGTACTTGTACCATGGTGCTTGACTTGATGACCAATGTAGTCAACACCG CTCAGGACACAAGGGGTGAGAATTCACGCCTTCTGTGCACATGTAAAAAA ATTGAAGTGAGCGGGAAATAGAGGAGAGTGGACCGTTCTTGACGTCTTGT ACCGCGGGCCTCTGCAACGTTGCACGAGAACGCGCTCGTGCAGAGGAAGC GCCGGTTCGCTTTTGAGACAAGCACGCAGCAACTTATGTACCCAACTATA TACTTAAAGCAACGAGCGGCTATACAACAAGTAGCCCTAGCAACTAGCGG GCATGGCCCAAGCACACTTGGAACCGTGGATCTAGCTAGCACCTGCGTGC ACCATGCAACAAAACACTTGGCGATGATTTAATGCATCATTCGGCAGGCT GCGGGCGGGCTCAAGAACGACTTTGAGTGCGACGACATGGTCCTCCAGGA CGAGCGCATCGGCGCTCTTCTCAGCTGAAGCAGCAGCTACTGATAGAGGC CTGCGAGTCTGCGCACGCACGTCTCTTCTCAGTGAAGCGGCCACTGATGG CGGCTGCGAGTCTCAAGCTGCGCACACAGATGGCATGGCTCGGGTTGCGA TGTTCATGTCATGGCTGTGAGTCTGTGCACACACATGGCTCGGGTTGCGA TGATCCTCATGTGATGGCTGCGAGGCTGCAGTGCGCACACACATGGCATG GCTCGGGTTGCGATGACCATGCTCCCGAGTCAGCTGCACGCCCCACTCAG GCTCTGCCTTGGCGGAAACAACTTGCAGTCGTCGATGAGCGCGTGCGTGG GGCTGCCGTTGGCGGCCGCCGGGCGCACTGTGCTTCAAGCTTCCAGGCAG AAGAAGTACTTGATAAGTGTAGAGGGCTCCCCCCTTTCGTGAACGTGATA CGAACATGCCGTGGATGATGTTGGGAGCATGCCTTTACTTGGTGAGTTTG TCCCTTGTTTCGACAGGTGTCCTGACCTGGGAGCGATAGAAGGGTTAGGA ACTCTTCTGGTGAGGTGGTCCTGATCACAATTGTGATGATTTCGGGATGC ACCCGGGGGGCCCAGAACTCACTTTTGCTGTGTGTTTTATTTGTAGAGTG CTCAATTAACACAGTACTCACTCACTCGCCTATTCGTGTCACATGTGGAC CCGGGCTTTCTCTCCAACCTCCAAGTCCGGAGGCGATGGCCGCCGCCAGG GAAGGGGAGGGGGAGGAGCAGGAGG
back to top

Coding sequence (CDS) from alignment at S-ischiensis_contig84:125244..135118-

>mRNA_S-ischiensis_contig84.20047.1 ID=mRNA_S-ischiensis_contig84.20047.1|Name=mRNA_S-ischiensis_contig84.20047.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1506bp|location=Sequence derived from alignment at S-ischiensis_contig84:125244..135118- (Schizocladia ischiensis KU_0333)
ATGAACGCGCGCGAGCTGGGCGACACCAAGCCTCTGGCGGACCTGTTCCT
GGGCAAGGTGGAGCACTACGTATTCATGAGCTCCGCCGGAGTGTACCTCA
AGTCGGAGACCATGCCGCACCGCGAGATGAACGCGCGCGAGCTGGGCGAC
ACCAAGCCTCTGGCGGACCTGTTCCTGGGCAAGGTGGAGCACTACGTATT
CATGAGCTCCGCCGGAGTGTACCTCAAGTCGGAGACCATGCCGCACCGCG
AGGGGGACGCGGTGGACCCCAAGTCCCGCCACAAGGGCAAGGCCGACAGC
GAAGCCTACCTGGAGGAGATCGGCATGCCCTACACCTCCATCCGGCCCAC
GGGGACGCGGTGGACCCCAAGTCCCGCCACAAGGGCAAGGCCGACAGCGA
AGCCTACCTGGAGGAGATCGGCATGCCCTACACCTCCATCCGGCCCACCT
ACATCTACGGGCCCCTGAACTACAACCCGCTGGAGCAGTACTTTTTTGAG
CGGCTGGACCAGGACCGGACCGTCATCGTCCCCGCTACATCTACGGGCCC
CTGAACTACAACCCGCTGGAGCAGTACTTTTTTGAGCGGCTGGACCAGGA
CCGGACCGTCATCGTCCCCGGGCACGGCCAGCACCTGACGGGCTTGGGGC
ACGTGCAGGACCTGGCGGAGGCCATGGCCAACGTCTTGGGGAAGGACGTT
GCAAAGGGGCAGATTTACAACGTTCAGGGCACGGCCAGCACCTGACGGGC
TTGGGGCACGTGCAGGACCTGGCGGAGGCCATGGCCAACGTCTTGGGGAA
GGACGTTGCAAAGGGGCAGATTTACAACGTTCAGGACAACAAGGCCATCA
CCTTCGACGGCATGGTGAAGGCGTGCGCGGAGGCCATGGGCAAGGACCCC
GAGAGACAACAAGGCCATCACCTTCGACGGCATGGTGAAGGCGTGCGCGG
AGGCCATGGGCAAGGACCCCGAGAGCGTGTCCATCAAGCACTACGACCCC
AAGGCGTACGACTTTGGCAAGAAGAAGGCCTTCCCGATGCGCCCGCAGCA
CTTCTACACCAGCGTGGAGAAGGCGATGACGGAACTCGGCTGGGCGCCCA
AGTTCGGCAGCGTGGAGGGGCTCAAGGACTCCTATGAGAACGACTTTGTC
CACAAGAAGGCGTGTCCATCAAGCACTACGACCCCAAGGCGTACGACTTT
GGCAAGAAGAAGGCCTTCCCGATGCGCCCGCAGCACTTCTACACCAGCGT
GGAGAAGGCGATGACGGAACTCGGCTGGGCGCCCAAGTTCGGCAGCGTGG
AGGGGCTCAAGGACTCCTATGAGAACGACTTTGTCCACAAGAAGGCTGCG
GGCGGGCTCAAGAACGACTTTGAGTGCGACGACATGGTCCTCCAGGACGA
GCGCATCGGCGCTCTTCTCAGCTGAGCTGCGGGCGGGCTCAAGAACGACT
TTGAGTGCGACGACATGGTCCTCCAGGACGAGCGCATCGGCGCTCTTCTC
AGCTGA
back to top