mRNA_S-ischiensis_contig84.20044.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig84.20044.1
Unique NamemRNA_S-ischiensis_contig84.20044.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
[Close]
BLAST of mRNA_S-ischiensis_contig84.20044.1 vs. uniprot
Match: A0A7S0L6V2_9EUKA (Inosine triphosphate pyrophosphatase n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L6V2_9EUKA)

HSP 1 Score: 220 bits (561), Expect = 2.170e-64
Identity = 110/194 (56.70%), Postives = 136/194 (70.10%), Query Frame = 1 
Query:  172 RLTDTLRVTFVTGNMNKLVECQMILAESKLPVELVNLDLDLPEYQGDHIEIARQKCMLAARRVGGPVLVEDTSLCFQALNGMPGPYIKWFVESIGNDGLYKLLAAHEDKSAYSQCAMSFTTGPGQEPWVFVGKSHGTIVEPTGTGGFGWDAIFQPEGQSDTIAQMSKAAKNRISHRGRALDKFQAFVSSNMDSL 753
            RL +   VTFVTGN  KL E + IL    LPVEL +  LDLPE QG+  EI+ +KC LA+ +VGGPV VEDTSLCF AL G+PGPYIKWF+E  G++GL  LLA++EDKSAY+QC  +F+ GPG  P  F G++ G IV   G   FGWD IFQP+G + T A+M KA KN+ISHR RAL K Q ++  N D+L
Sbjct:   48 RLMNKPVVTFVTGNAKKLEEVRAILGGESLPVELTSRKLDLPELQGEPEEISARKCELASEQVGGPVFVEDTSLCFNALAGLPGPYIKWFLEKTGHEGLNNLLASYEDKSAYAQCIFAFSAGPGCSPVTFDGRTPGIIVPARGPHDFGWDPIFQPDGYTLTYAEMDKAEKNKISHRYRALAKLQQYLVDNADAL 241
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BLAST of mRNA_S-ischiensis_contig84.20044.1 vs. uniprot
Match: A0A6S9GJK0_HETAK (Inosine triphosphate pyrophosphatase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9GJK0_HETAK)

HSP 1 Score: 222 bits (565), Expect = 2.180e-64
Identity = 104/207 (50.24%), Postives = 143/207 (69.08%), Query Frame = 1 
Query:  124 LRGASCLQSSSLRVGPRLTDTLRVTFVTGNMNKLVECQMILAES-KLPVELVNLDLDLPEYQGDHIEIARQKCMLAARRVGGPVLVEDTSLCFQALNGMPGPYIKWFVESIGNDGLYKLLAAHEDKSAYSQCAMSFTTGPGQEPWVFVGKSHGTIVEPTGTGGFGWDAIFQPEGQSDTIAQMSKAAKNRISHRGRALDKFQAFVSSN 741
            L   + L+SS+   G     T  +TFVTGN NKL E +MI+A +     E+ N++LDLPE+QGD   I+++KC +AA++VGGPV+VEDTSLCF  + GMPGPY+KWF +++GN G+Y++L   ED++ Y+QCA+SF  GPG EP  F+G  +G IVEP     FGWD IFQP G S   + M K+ KN+ISHR +AL KF+ ++  N
Sbjct:   46 LHSPALLKSSTYGYGEEPDSTPLITFVTGNTNKLQEVRMIVASAFDSAFEVTNMELDLPEFQGDPETISKEKCKMAAQQVGGPVIVEDTSLCFNGIGGMPGPYVKWFHKAVGNRGMYRMLEGFEDRTGYAQCALSFALGPGHEPQTFIGVVNGHIVEPGPDNDFGWDPIFQPNGYSTCFSGMPKSEKNKISHRSQALSKFKDYLEEN 252
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BLAST of mRNA_S-ischiensis_contig84.20044.1 vs. uniprot
Match: R1FN82_EMIHU (Inosine triphosphate pyrophosphatase n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FN82_EMIHU)

HSP 1 Score: 218 bits (556), Expect = 2.460e-64
Identity = 107/180 (59.44%), Postives = 128/180 (71.11%), Query Frame = 1 
Query:  193 VTFVTGNMNKLVECQMILAESKLPVELVNLDLDLPEYQGDHIEIARQKCMLAARRVGGPVLVEDTSLCFQALNGMPGPYIKWFVESIGNDGLYKLLAAHEDKSAYSQCAMSFTTGPGQEPWVFVGKSHGTIVEPTGTGGFGWDAIFQPEGQSDTIAQMSKAAKNRISHRGRALDKFQAFV 732
            VTFVTGN  KL E + IL    LPV +V+  LDLPE QG+  EI+ +KC LAA +VGGPV VEDTSLCF AL G+PGPYIKWF+E  G++GL  LLAA+ DKSAY+QC   F+ GPGQ P  F G++ G IV   G   FGWD +FQPEG S+T A+M KA KN+ISHR RAL K Q  +
Sbjct:    8 VTFVTGNAKKLEEVRAILGGDALPVRIVSQKLDLPELQGEPEEISSEKCRLAAEQVGGPVFVEDTSLCFNALGGLPGPYIKWFLEKTGHEGLNNLLAAYPDKSAYAQCIFGFSAGPGQTPITFDGRTPGQIVPARGPTDFGWDPVFQPEGYSETYAEMDKAEKNKISHRYRALVKLQEHL 187
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BLAST of mRNA_S-ischiensis_contig84.20044.1 vs. uniprot
Match: A0A7S4EUW0_CHRCT (Inosine triphosphate pyrophosphatase n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4EUW0_CHRCT)

HSP 1 Score: 220 bits (560), Expect = 6.230e-64
Identity = 109/188 (57.98%), Postives = 131/188 (69.68%), Query Frame = 1 
Query:  190 RVTFVTGNMNKLVECQMILAESKLPVELVNLDLDLPEYQGDHIEIARQKCMLAARRVGGPVLVEDTSLCFQALNGMPGPYIKWFVESIGNDGLYKLLAAHEDKSAYSQCAMSFTTGPGQEPWVFVGKSHGTIVEPTGTGGFGWDAIFQPEGQSDTIAQMSKAAKNRISHRGRALDKFQAFVSSNMDSL 753
            +VTFVTGN  KL E + IL    LPVE+V+  LDLPE QGD  EI+ +KC LAA  VGGPV VEDTSLCF ALNG+PGPYIKWF+E  G+ GL  LLAA+EDKSAY+QC  ++  GPG  P  F G++ G IV   G   FGWD +FQP+G  +T A+M KA KN ISHR RAL K Q  +S++   L
Sbjct:   86 KVTFVTGNAKKLEEVRAILGGESLPVEIVSQKLDLPELQGDPEEISAKKCELAAVEVGGPVFVEDTSLCFNALNGLPGPYIKWFLEKTGHTGLNNLLAAYEDKSAYAQCIFAYCDGPGHTPVTFDGRTAGIIVPARGPHDFGWDPVFQPDGFKETYAEMDKAVKNTISHRYRALAKLQTHLSASASRL 273
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BLAST of mRNA_S-ischiensis_contig84.20044.1 vs. uniprot
Match: A8JEL2_CHLRE (Inosine triphosphate pyrophosphatase n=4 Tax=Chlamydomonadales TaxID=3042 RepID=A8JEL2_CHLRE)

HSP 1 Score: 214 bits (545), Expect = 7.440e-63
Identity = 102/193 (52.85%), Postives = 138/193 (71.50%), Query Frame = 1 
Query:  175 LTDTLRVTFVTGNMNKLVECQMILAE-SKLPVELVNLDLDLPEYQGDHIEIARQKCMLAARRVGGPVLVEDTSLCFQALNGMPGPYIKWFVESIGNDGLYKLLAAHEDKSAYSQCAMSFTTGPGQEPWVFVGKSHGTIVEPTGTGGFGWDAIFQPEGQSDTIAQMSKAAKNRISHRGRALDKFQAFVSSNMDS 750
            +T   ++ F TGN  KL E   ILA  ++LP E+V   LDLPE QG+  EI+++KC +AA+ VGG V+VEDTSLCF A++G+PGPYIKWF+E +G+DGL ++LA  EDKSAY+QC  ++T GP  EP VFVG++ G IV+  G   FGWD +F P+G +DT A+M K  KN ISHR R+LDK + ++ S+  S
Sbjct:    1 MTTPSKIHFATGNKKKLEEVNAILAAGAELPFEVVAAKLDLPELQGEPEEISKEKCRIAAKLVGGAVMVEDTSLCFNAMHGLPGPYIKWFLEKLGHDGLNRMLAGFEDKSAYAQCIFAYTPGPDTEPIVFVGRTEGRIVQARGPTDFGWDPVFLPDGFTDTYAEMDKTTKNTISHRYRSLDKLRTYLLSHAAS 193
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BLAST of mRNA_S-ischiensis_contig84.20044.1 vs. uniprot
Match: A0A836C8S4_9STRA (Inosine triphosphate pyrophosphatase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8S4_9STRA)

HSP 1 Score: 213 bits (543), Expect = 8.990e-63
Identity = 97/173 (56.07%), Postives = 129/173 (74.57%), Query Frame = 1 
Query:  238 MILAESKLPVELVNLDLDLPEYQGDHIEIARQKCMLAARRVGGPVLVEDTSLCFQALNGMPGPYIKWFVESIGNDGLYKLLAAHEDKSAYSQCAMSFTTGPGQEPWVFVGKSHGTIVEPTGTGGFGWDAIFQPEGQSDTIAQMSKAAKNRISHRGRALDKFQAFVSSNMDSLL 756
            MI+  + +P+ +VN DLDLPE QGD + I+++KC LAA  VGGP +VEDTSLC  ALNGMPGPYIK+F+++ GN+GL+ ++ A+ DK+AY+QC MSF+ GPG EP  FVG++ GTI  P G GGFGWDAIF P G   + A M +  KN+ISHR  AL KF A++  N+D+L+
Sbjct:    1 MIIEANHIPLTIVNRDLDLPEIQGDPVLISQEKCKLAAVEVGGPAMVEDTSLCLNALNGMPGPYIKFFLKACGNEGLWNMIKAYSDKTAYAQCCMSFSLGPGCEPVTFVGRTDGTITSPCGAGGFGWDAIFIPRGYDLSFASMPQEEKNKISHRSDALAKFAAYLKENLDALI 173
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BLAST of mRNA_S-ischiensis_contig84.20044.1 vs. uniprot
Match: A0A0M0JUX8_9EUKA (Inosine triphosphate pyrophosphatase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JUX8_9EUKA)

HSP 1 Score: 219 bits (558), Expect = 9.540e-63
Identity = 106/195 (54.36%), Postives = 135/195 (69.23%), Query Frame = 1 
Query:  193 VTFVTGNMNKLVECQMILAESKLPVELVNLDLDLPEYQGDHIEIARQKCMLAARRVGGPVLVEDTSLCFQALNGMPGPYIKWFV---ESIGNDGLYKLLAAHEDKSAYSQCAMSFTTGPGQEPWVFVGKSHGTIVEPTGTGGFGWDAIFQPEGQSDTIAQMSKAAKNRISHRGRALDKFQAFVSSNMDSLLGGLE 768
            + FVTGNM K  E   IL+E  +P  + ++D+DLPE QGD +EIAR KC  AA +V   VLVEDTSLCF ALNGMPGPYIKWF    +++GN+GLY LLA H D SAY QC + F+ GPG EP +FVG++ G IV P  TGGF WDAIF PEG +   + M+   KNRISHR RAL +F  ++  + D+++  +E
Sbjct:  120 IYFVTGNMMKEREVNAILSEVDMPFRVTHVDIDLPELQGDALEIARHKCREAANQVDSAVLVEDTSLCFTALNGMPGPYIKWFQMPSQTLGNEGLYSLLAGHTDHSAYCQCILGFSAGPGAEPVLFVGRTPGRIVPPASTGGFAWDAIFVPEGHTAPFSSMAVGEKNRISHRARALRRFVDYLLQHQDAVIKAIE 314
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BLAST of mRNA_S-ischiensis_contig84.20044.1 vs. uniprot
Match: A0A2V0P5Y1_9CHLO (Inosine triphosphate pyrophosphatase n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0P5Y1_9CHLO)

HSP 1 Score: 214 bits (545), Expect = 9.970e-63
Identity = 103/189 (54.50%), Postives = 134/189 (70.90%), Query Frame = 1 
Query:  169 PRLTDTLRVTFVTGNMNKLVECQMIL-AESKLPVELVNLDLDLPEYQGDHIEIARQKCMLAARRVGGPVLVEDTSLCFQALNGMPGPYIKWFVESIGNDGLYKLLAAHEDKSAYSQCAMSFTTGPGQEPWVFVGKSHGTIVEPTGTGGFGWDAIFQPEGQSDTIAQMSKAAKNRISHRGRALDKFQAFV 732
            P+      + F TGN  KL E   IL A  KLP  + ++ +DLPE QG+  EI+R+K  LAA+ VGGPV+VEDTSLC+ AL G+PGPYIKWF+E +G++GL KLLA +EDK+AY+QC  ++T GPG EP VFVG++HG IV   G   FGWD +F+PEG  +T A+M    KN ISHR RALDK +A++
Sbjct:    9 PQHPTPATIHFATGNKKKLEEVVAILGAGQKLPFSVDSVKIDLPELQGEPEEISREKARLAAKAVGGPVMVEDTSLCYNALQGLPGPYIKWFLEKLGHEGLNKLLAGYEDKTAYAQCIFAYTPGPGVEPVVFVGRTHGRIVPARGDNQFGWDPVFEPEGFGETYAEMDSKIKNTISHRYRALDKLRAYL 197
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BLAST of mRNA_S-ischiensis_contig84.20044.1 vs. uniprot
Match: A0A7S0VHY9_9CRYP (Inosine triphosphate pyrophosphatase n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VHY9_9CRYP)

HSP 1 Score: 213 bits (543), Expect = 1.960e-62
Identity = 100/187 (53.48%), Postives = 137/187 (73.26%), Query Frame = 1 
Query:  193 VTFVTGNMNKLVECQMILAESKLPVELVNLDLDLPEYQGDHIEIARQKCMLAARRVGGPVLVEDTSLCFQALNGMPGPYIKWFVESIGNDGLYKLLAAHEDKSAYSQCAMSFTTGPGQEPWVFVGKSHGTIVEPTGTGGFGWDAIFQPEGQSDTIAQMSKAAKNRISHRGRALDKFQAFVSSNMDSL 753
            +TFVTGN  KL E + I+ E +LP  +V++ +DLPE QG   E++++KC LAA+  GGPVLVEDTSLCF ALNG+PG YIKWF+E IG++GL  +L A++DKSAY+QC  +++ GPG+EP VFVG++ G +V   G   FGWD +FQP+G   T A++ K  KN ISHRGR+L+K +A+   N  +L
Sbjct:   19 ITFVTGNAKKLAEVRAIVGE-ELP--MVSMKIDLPELQGAPEEVSKEKCRLAAKESGGPVLVEDTSLCFNALNGLPGVYIKWFLEGIGHEGLNNMLMAYDDKSAYAQCIFAYSKGPGEEPVVFVGRTEGKVVPARGPLDFGWDPVFQPDGYDKTYAELDKEVKNSISHRGRSLEKVKAYFKENPSAL 202
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BLAST of mRNA_S-ischiensis_contig84.20044.1 vs. uniprot
Match: M4B6N7_HYAAE (Inosine triphosphate pyrophosphatase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B6N7_HYAAE)

HSP 1 Score: 213 bits (541), Expect = 2.710e-62
Identity = 106/180 (58.89%), Postives = 133/180 (73.89%), Query Frame = 1 
Query:  193 VTFVTGNMNKLVECQMILAESKLPVELVNLDLDLPEYQGDHIEIARQKCMLAARRVGGPVLVEDTSLCFQALNGMPGPYIKWFVESIGNDGLYKLLAAHEDKSAYSQCAMSFTTGPGQEPWVFVGKSHGTIVEPTGTGGFGWDAIFQPEGQSDTIAQMSKAAKNRISHRGRALDKFQAFV 732
            +TFVTGN NKL E   IL  S  P EL N D+DLPE QG+  EIA++KC LAA++V G VLVEDTSLCF AL G+PGPYIKWF+E  G+DGL K+LAA+EDKSAY+QC  ++ +  G EP VF+G++ GTIV   G   FGWD +FQP+G   T A+M K  KN+ISHR +AL+ F+A+V
Sbjct:    8 LTFVTGNSNKLKEVIAILG-SDFPFELRNQDVDLPELQGEPAEIAKEKCRLAAKQVQGAVLVEDTSLCFNALKGLPGPYIKWFLEKTGHDGLNKMLAAYEDKSAYAQCIFAYASA-GAEPQVFIGQTPGTIVPARGPTTFGWDPVFQPDGFDKTYAEMDKLTKNQISHRYKALEAFRAYV 185
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig84.20044.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S0L6V2_9EUKA2.170e-6456.70Inosine triphosphate pyrophosphatase n=1 Tax=Cocco... [more]
A0A6S9GJK0_HETAK2.180e-6450.24Inosine triphosphate pyrophosphatase n=1 Tax=Heter... [more]
R1FN82_EMIHU2.460e-6459.44Inosine triphosphate pyrophosphatase n=2 Tax=Emili... [more]
A0A7S4EUW0_CHRCT6.230e-6457.98Inosine triphosphate pyrophosphatase n=1 Tax=Chrys... [more]
A8JEL2_CHLRE7.440e-6352.85Inosine triphosphate pyrophosphatase n=4 Tax=Chlam... [more]
A0A836C8S4_9STRA8.990e-6356.07Inosine triphosphate pyrophosphatase-like protein ... [more]
A0A0M0JUX8_9EUKA9.540e-6354.36Inosine triphosphate pyrophosphatase n=1 Tax=Chrys... [more]
A0A2V0P5Y1_9CHLO9.970e-6354.50Inosine triphosphate pyrophosphatase n=1 Tax=Raphi... [more]
A0A7S0VHY9_9CRYP1.960e-6253.48Inosine triphosphate pyrophosphatase n=1 Tax=Hemis... [more]
M4B6N7_HYAAE2.710e-6258.89Inosine triphosphate pyrophosphatase n=1 Tax=Hyalo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig84contigS-ischiensis_contig84:100428..106970 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score218.4
Seed ortholog evalue3.7e-54
Seed eggNOG ortholog2903.EOD37076
KEGG rclassRC00002
KEGG koko:K01519
KEGG ReactionR00426,R00720,R01855,R02100,R02720,R03531,R08243
KEGG Pathwayko00230,ko00983,ko01100,map00230,map00983,map01100
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576
EggNOG free text desc.NADH pyrophosphatase activity
EggNOG OGsCOG0127@1,KOG3222@2759
COG Functional cat.F
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Hectar predicted targeting categorysignal peptide
Exons7
Model size1727
Cds size729
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817334.2488499-UTR-S-ischiensis_contig84:100427..1013741622817334.2488499-UTR-S-ischiensis_contig84:100427..101374Schizocladia ischiensis KU_0333UTRS-ischiensis_contig84 100428..101374 -
1695741035.3302293-UTR-S-ischiensis_contig84:100427..1013741695741035.3302293-UTR-S-ischiensis_contig84:100427..101374Schizocladia ischiensis KU_0333UTRS-ischiensis_contig84 100428..101374 -
1622817334.3523622-UTR-S-ischiensis_contig84:106919..1069701622817334.3523622-UTR-S-ischiensis_contig84:106919..106970Schizocladia ischiensis KU_0333UTRS-ischiensis_contig84 106920..106970 -
1695741035.4446585-UTR-S-ischiensis_contig84:106919..1069701695741035.4446585-UTR-S-ischiensis_contig84:106919..106970Schizocladia ischiensis KU_0333UTRS-ischiensis_contig84 106920..106970 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817334.263159-CDS-S-ischiensis_contig84:101374..1014311622817334.263159-CDS-S-ischiensis_contig84:101374..101431Schizocladia ischiensis KU_0333CDSS-ischiensis_contig84 101375..101431 -
1695741035.3443263-CDS-S-ischiensis_contig84:101374..1014311695741035.3443263-CDS-S-ischiensis_contig84:101374..101431Schizocladia ischiensis KU_0333CDSS-ischiensis_contig84 101375..101431 -
1622817334.2772298-CDS-S-ischiensis_contig84:102213..1023031622817334.2772298-CDS-S-ischiensis_contig84:102213..102303Schizocladia ischiensis KU_0333CDSS-ischiensis_contig84 102214..102303 -
1695741035.3599713-CDS-S-ischiensis_contig84:102213..1023031695741035.3599713-CDS-S-ischiensis_contig84:102213..102303Schizocladia ischiensis KU_0333CDSS-ischiensis_contig84 102214..102303 -
1622817334.2893827-CDS-S-ischiensis_contig84:102881..1029591622817334.2893827-CDS-S-ischiensis_contig84:102881..102959Schizocladia ischiensis KU_0333CDSS-ischiensis_contig84 102882..102959 -
1695741035.3723078-CDS-S-ischiensis_contig84:102881..1029591695741035.3723078-CDS-S-ischiensis_contig84:102881..102959Schizocladia ischiensis KU_0333CDSS-ischiensis_contig84 102882..102959 -
1622817334.3025067-CDS-S-ischiensis_contig84:103322..1034301622817334.3025067-CDS-S-ischiensis_contig84:103322..103430Schizocladia ischiensis KU_0333CDSS-ischiensis_contig84 103323..103430 -
1695741035.3821504-CDS-S-ischiensis_contig84:103322..1034301695741035.3821504-CDS-S-ischiensis_contig84:103322..103430Schizocladia ischiensis KU_0333CDSS-ischiensis_contig84 103323..103430 -
1622817334.316774-CDS-S-ischiensis_contig84:104659..1047851622817334.316774-CDS-S-ischiensis_contig84:104659..104785Schizocladia ischiensis KU_0333CDSS-ischiensis_contig84 104660..104785 -
1695741035.3939772-CDS-S-ischiensis_contig84:104659..1047851695741035.3939772-CDS-S-ischiensis_contig84:104659..104785Schizocladia ischiensis KU_0333CDSS-ischiensis_contig84 104660..104785 -
1622817334.3297348-CDS-S-ischiensis_contig84:105656..1057491622817334.3297348-CDS-S-ischiensis_contig84:105656..105749Schizocladia ischiensis KU_0333CDSS-ischiensis_contig84 105657..105749 -
1695741035.411819-CDS-S-ischiensis_contig84:105656..1057491695741035.411819-CDS-S-ischiensis_contig84:105656..105749Schizocladia ischiensis KU_0333CDSS-ischiensis_contig84 105657..105749 -
1622817334.3412192-CDS-S-ischiensis_contig84:106742..1069191622817334.3412192-CDS-S-ischiensis_contig84:106742..106919Schizocladia ischiensis KU_0333CDSS-ischiensis_contig84 106743..106919 -
1695741035.4251688-CDS-S-ischiensis_contig84:106742..1069191695741035.4251688-CDS-S-ischiensis_contig84:106742..106919Schizocladia ischiensis KU_0333CDSS-ischiensis_contig84 106743..106919 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig84.20044.1prot_S-ischiensis_contig84.20044.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig84 101375..106919 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig84.20044.1

>prot_S-ischiensis_contig84.20044.1 ID=prot_S-ischiensis_contig84.20044.1|Name=mRNA_S-ischiensis_contig84.20044.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=243bp
MQPVHASTPRAGGFELVTVLSLLLLRGASCLQSSSLRVGPRLTDTLRVTF
VTGNMNKLVECQMILAESKLPVELVNLDLDLPEYQGDHIEIARQKCMLAA
RRVGGPVLVEDTSLCFQALNGMPGPYIKWFVESIGNDGLYKLLAAHEDKS
AYSQCAMSFTTGPGQEPWVFVGKSHGTIVEPTGTGGFGWDAIFQPEGQSD
TIAQMSKAAKNRISHRGRALDKFQAFVSSNMDSLLGGLEGAQ*
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mRNA from alignment at S-ischiensis_contig84:100428..106970-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig84.20044.1 ID=mRNA_S-ischiensis_contig84.20044.1|Name=mRNA_S-ischiensis_contig84.20044.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=6543bp|location=Sequence derived from alignment at S-ischiensis_contig84:100428..106970- (Schizocladia ischiensis KU_0333)
GTCCGAACTGGGCAACGTGCACGTTTACTGGGATTTCCACCCCTGGAGGT
GATGCAGCCGGTACATGCATCAACGCCCCGTGCGGGGGGTTTCGAACTGG
TGACGGTGCTCTCTCTGCTGTTGTTAAGGGGAGCAAGCTGTCTGCAATCA
AGCAGCTTGCGGGTCGGACCAAGACTAACAGACACGCTCCGAGTTACGTT
CGTGACGGGGAACATGAACAAGCTCGTGGTGGGTATTCAATTAGAGCTCT
AGGCCCCAACAGCGGTTCGAACTATGCCCATAGCTGTGCTCGGGGGAAGC
GACCAGCGTCTCCTTCCACTCCCTCCCTCCCCAGCCCTTCCGGCGGAGGA
TACTACTTACCATGGCCGGACACGCTTTCCATGCCCCAGTACCCACAGTA
GTACAGTGCGGAATAAGAGTACCGCGGGTCACTGAGGGAGCCCCCAAACC
TGCCTGTGTGTAACTGACGATGCACGCCCGTTTGCTCCAGCTCGCTCTTT
TTTGTTTTGCCATTTTAATTCACGATAGATTCCGCTGAGCTTTTGAATCG
ATGTCGAGTGTATTCCACGGCAGAGCTACTGTCCCAACTTGCTGTTTCAA
AAGCAACTGACTCACAGCATTGGTGACTGTCCCAACTTGCTGTTTCAAAA
ACAACCGACTCACAGTATTGGTGACGTGGCCTGCACCTCGCCCTGTGCTG
TTCCTGTTGGTACTACTGCAGTACTTCGAAGTAGGTGCTGTACTTGCACA
ACGCTTACGCCCTTTTACGGCAGCATTTTTCTGGGGGGGTTGCAAACACG
TGGAATCGAAACTGCCTTGTGCGATGCTTTAAGCATAGCGCTTGGCCTTG
GCTTGCAGAAGCATAGCCGAGGGCCTAGCGGATGCTGCAGTGACGTTTGT
TTTCATGGGGACAAGCAGAATACCTCGTCTGGTACCTGCTGCACTTCGAA
GTACAACTGCCGGCACCGCCGCTGCCGTCCCCACCACCGCCACCACGAAG
ACCACCACCACCACCACCACCACCCACCACCACCGCCACAACCACCACCA
CCACCGCCACCACCACCGCCACCACCACCACCACCACCACCACCACCACC
ACCACCACCACCACCACCACCACCACCACCAACACCACCACCACCACCAC
CACTACGACTACCACCACCACCACCACCACGAAGACCACCCCCGCCCACG
CCTACGCTGCCCTGCCTCCAGGAATGTCAGATGATTTTGGCTGAGTCGAA
GTTGCCTGTCGAGCTCGTCAACCTGGATCTGGATCTCCCAGAGTACCAGG
GCGACCATATCGAGGTGAGCCCCCGTCCGTTGATAGGGTTGTGAACTGGT
GCCGTTTTTTACCGGTCGGTACCAGTTGTCTGGTTTACCCGGCTAGCTGA
CCGGTGGCCAATCGTGTAGCCGGAGCGGGTGACATGACCTTTGTTCATGG
ATTTTGGCAATACTTTAGCCGCTACCGGCGACCGGCTACAACCGACCGGT
CACAAGACCGGTTAACAGTTAAACTGGTAGGCCTTGCCAGTTCACAACCC
TACCGTTGCCCCTTAGAGGATGGTGGCACACTGCTCTAATCCGTAGAGTT
GTGAACTGGCAAGGCCTGCCAGTTTAACTGTTAACTAACCGGTCGGGTGA
CCGGTCGGTTGTAGCCGGTTGCCGGTAACGGCTAGCGCATTGCCAACATC
AACAAAATAGGTAACGTCACCCGCTCCGGGTCCACGATTGGCCACCGGTC
GGTGAGCCGGTTAAACCAGTTCGCTGGTACCGACCGGTAACAACCGGCAC
CAGTTCACAACACTACTAGTAATGTAGAGTAGTCCCTCTGTGAACTTCTT
TCAGTGGTTTGGTGTACCGTTGTCCGCAAAGAGTTGAAGGGGAAGTTGGT
CCGGTCATGGAGCCGTGGCCAGTGCAGGCGACTCGGCTGCTCTCTGTGTA
TTCGAGGGTACCCACGTGCTTGAAAGTGCTCCCATTCCTACGAATGCTTC
AGTGATTGCACGCACAACACGCATGCTCCACAAACACACGCGCCCGTGCA
CACACACACACGCACATACACACACATGCGCGCGCTGACACGCCATGGGT
TTGTAACGACTGGGTACAGCCACCTGCTCCTGCATCTACCTTCTGTGACG
TAGTCATCTACCCCCATGTTCGCTTGACGTGACAGATAGCGAGGCAGAAG
TGTATGTTGGCGGCGAGGAGAGTGGGCGGGCCGGTGCTAGTGGAGGACAC
ATCCCTGTGCTTCCAGGCCCTCAACGGCATGCCGGGACCGTACATCAAGT
GGTTTGTGGAGGTGAGACACAGTAGATACAGCAACTACATTACTAGTATT
ATAAGGAACAACACGGGGCGAGATGCGGGCCACGTCACCAGAGACCTCGG
CAGTGGCCCTTCCTTAGCTCTAGTAGTAGTGTTGTGAACTGGTGCCGTTT
TTTACGGGTCGGTACCAGTTAGCTGGTTTAACCCGTTAACCGACCGTGGA
GCCGGAGCGGGTGACATGACCGCTATTATTTGACTTTGGCAATACGTTAG
CCGTTACCGGCAACCGGTTGAAACCGACCGGTCACTCGACCGGTCAACAG
TGAAACTGGTAGGCCTTGCCAGTTCCCTCCCAACTCTAGCAGCTAGGTAA
GCACAGCACACGTGACTTACAAAGCCCAATACCAGTCTGATACAAGCAGC
TCTGCCGGACGCACTCAGGTACAATACTTCAAAGTGCCTGCTCTTTGATA
GACGCGGCGGCGGCGGCCGACACCACCACCACTGCCAACACCACGCCTGC
GGCCGCTGTACCTGTGGGCCCGCTTGCCACCTACCCCCCCTCCTTGTCCT
TAGTTCCTTGATGTGATAATCACTAGTATTTTAAGCAACAACACGGGGTG
AGGTGCAGGCCACGTCACTAAAGACCTCAACAATGGCCCTTCCTTGGCTC
GCCAGGGGAAAGTTTGTGGGGAAGGGGAGGTGGACGGGGAGGAGGAGGGG
GAGTAGTAGTTCGCATACGGACATTGAATTGCAAATGGGACAACTACTAA
TACGAGAACAGTGAATCTCACACACGTGCGATTGTGCCTCGTTGCTTCGT
ACAATTGTGTGAATCGCCCCTCGCCACCTACCGCACGGGCCATGCAGAGC
ATCGGCAACGAGGGCCTCTACAAGCTCCTGGCGGCGTTACTAACTACTTG
GATTTAGTGTGGGTCAAACGGACGAATATCGATCATCGATAGATATGTAC
TCTCGATCAGTACTGTCGATAAATACGTTGATTTGCATAGACATTCCATC
ACTGCCGCTCGCCACCTACCATACCGGCCATGCAGAGCATCGGCAGCGAG
GGCCTCTACAAGCTGCTGGCGGAGCACGAGGGCAAGTCGGCTTACTCGCA
GATTTGTATTTTTGTTCTTCTCTCTATCTACAACACATTACCTAGAGGTT
GTCTGCCCCAAACATTTCAGATTGAATTCTGAATTATTATATTAAAAACG
AGCAAAAATACTCCCCGCTCGCCACCTACCGGCCGTGCAGAGCATCGGCA
ACGACGGCCTGTACAAGCTGCTGGCGGCACACGAGGACAAGTCGGCTTAC
TCGCAGTGCGCAATGTCCTTCACCACGGGGCCGGGACAAGAACCTTGGGT
GAGAAATGGGAGAGAGGGGGGGAGAGAGAGAGAGAGAGAGGCGGGGGGGG
GGGGGAAGGAGGGAGGGAGGGAGGGAGAGAGAGAGAGAGAGAGGGAGAGA
GGAGAGAGAGAGAAGAGAGCGAGAGAGTGGGGGGGGGGGGAAGGAGGGAG
GGAGGGAGGGAGGGAGAGAGGAGATATGCATATATATATATAGAGAGAGG
AGAGAGAGAGAGAGGCAAGGCTTGAACACTTCTATGCCCCCCCTACCCAC
ACAGGCACACACGTATCGTGCATGTGGCAGAAAAAGACTCGGGCCCTCAA
CCACCCCACCTCATCCTAGCGCTCCGCCCCTGACTGCCACGGCCGTCACC
GGCCCAAACAGGTGTTTGTGGGAAAATCGCACGGGACCATTGTGGAGCCC
ACGGGCACCGGAGGGTTCGGCTGGGACGCCATTTTTCAGGTACAGTACAG
TTGTAGTAGCAGTCCAGTAGTAGTAGTAGTGGTAGTAGTAGTACTTAGTA
CGCGGGTAGTAGTAGTAGAGCCAGTACAATAGTAGCAGCAGCAGCAGGTC
TAGTAGTAATACCGCGTTGTCACTGCCGCAAACTGCAGTTGCGGTACAGT
AGTTGGGTGGGCTCCGCCGGCAAGTACAAGCACAGTCCGCGAGTACCCCC
ATCACGATCACGAGCTACAATACCTCCCCCCCCCCCGCCCCTCTCCTTGT
TTTAGTTCCTTGATGTGATAATCACTAGTACGGAAGTATAAGAACAGTCA
ATCTCACGCACGTGCGATTGTACCTCGTTACAATTTATATGAATCACCTA
CAACAGCCTGTCGTCCATGGCGGCCCTCGCCCGTCGCGCTCGCTCGCTCG
CCCCGCCTCGGACAATATGGCAGCCAGAAGGCCAATCAGACACAGTGGCA
CAGATGTACGCCCATCACAAGCTACAATAACAGCCACTTCAGTACATTAG
CCTGTTGTCCATGGCGGCCCACGCCCATCACGCTCGTTCGCTCGCCCCGC
CTCGTGCAATACGGCAGCCAGAAGGCCAGTCGGACACAATAGCACAGATG
TCCAAGGCGGCCAAGAACCGCATCTCGCACCGGGGGCGGGCGTTGGACAA
GTTCCAGGTGATTCACATATATTGTAACGTTGTAATTGCCCATGTTCGTT
GCTTCTTTGCGTGATTTTGGTGCCCTGCGGGTGAAAAAGCAGGGCTTCTG
GCGAGGTCCCCCCCTTAGGCTGTTGGGACGGGGCCCGGGACTCGCGTGGC
ATCGAAATAATCATTGAAATATTGAAACGAAGGACGATCGCACTTGTGTG
AGATTGAGTGTTCTCGTATTAGTGGTTGTCCAATTCTTGTGTGAGATTGA
GTGTTCTCGTATTAGTGGTTGTCCAATTTAAGGATTGAGTGTTCTCGTAT
TAGTGACTGTCACATCAAAGCAAGAGGGGGAAAAAAGAAAAAAAAGAAGT
TCCAAGTGCGGGCGTCTGCAGGCGCGCACAGGCGGTGATTGGTGATTGGC
GGTTGGTGTATCACCCGTGCTCTGCTTGCTGGTCCTCTGTCGCCGCGTTT
GGCGTCCGGGCTTTTGAGGCATGCGTGCGTGCGCGAATTCGCTTCGTCGT
CCATTGCTCCCACTTGTTGATGTGTTTTGTGAGGCCTGCACCTCGCCCTG
TGTTTTGCTTTTCCTGTCAGTGCTTCCATTCCAAGTGCTCGAGTACTCCT
GGAAGCTGGAAGTATTAAGTAACTGGAAGTATTGACTGGAATAACACCGG
CTGAGGTGCAGGCCACGCCAAGCTGGAAGCTGGAAGTACTTGAAGTCGCA
AGACGTTGCAAATAGCAACTGCCGCCGCCACTGCCATTCTCTTCTCTTCT
CCCCCCCCCCCCCCCGCCGACCCGTGCACGCCTGTGAAGGCGTTTGTCAG
CAGCAACATGGACTCTCTCCTGGGGGGCCTCGAGGGAGCACAATGACCTT
GGAGTCTGCCACACCGCCCTGTGGTGGCGGGACCCTCCTATCACTGGAAT
GAAGTTATCAGTGCTGAGTTATCAGAGCCTTGATAGCCCCTGCGCTCAGG
CTCGGGGTCGAGCCGCGCCGCGCTCGAGGCTTTTGAGCAGAGTTGGTACG
TACAGTTGTAGAGGTAAAATTAGGGCCTAATTAGCCTTAAGTTTAGGTCT
AGTTGCCCCTAATTACCTCTAGTTAAGGGCGCTCGGGCTCGGGCTCGGGC
CGCGCCATGCTCGAGGCTTTTTGAGCAGGGTTGGCACTTAGAGGTCAACT
AGGGCCTAATTAGCTGAGGGCTTAAGTGCCGACCCTGCTTTTGAGCAGTA
TGAAGTATTGCACCACCGCGTTAACAATTGTACTGTGGTGACTCCAGCTC
GAAGTTGAACTTATGGCTGTCTGAAAGCAAGAAGTGCCAATCTTGATGAT
GCGTGGAAATAGGTCACCGGGTGGTGATTCGGGTTCATTTTAACGAGGCA
CTTCTTCGTGCAATCTCACCTGCGTGAAATGGAGAGCTCACTTGTTGTTT
GTCTTCTTCCACAGATAGTTGGGGCGCGCTCCTTGGAGGCGTTCTACGCG
AGGGGGGGGGGTCAAATCGGGCAGTATCTTACATCGAGAGCGGTGCCCAC
CGCGGTCGAAAGTGGTGGCCACCATTTTGGGCCTGCAGCTGTAACTCGTG
GGCCACTTGGACAAGAATTGTGAAATTTTGTCCGTGGTCGGCTGTAGTGT
TGATGAACATCATCACAAAGTTTCGTGGAGCGGATCCATGTACTTCACGA
GAAACAGCTATGTGAGCCAAAGCGGTGGCCACCATTTTGCTATCGAAAGT
GGTGGCCACCACTTTGGTGCTGATGTAAGATTACCCCCCCCCCCCTCGCG
TAGAACGCCTCTTGAGATTGCGTGGCTAAATCAGGAGCAGTTG
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Coding sequence (CDS) from alignment at S-ischiensis_contig84:100428..106970-

>mRNA_S-ischiensis_contig84.20044.1 ID=mRNA_S-ischiensis_contig84.20044.1|Name=mRNA_S-ischiensis_contig84.20044.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1458bp|location=Sequence derived from alignment at S-ischiensis_contig84:100428..106970- (Schizocladia ischiensis KU_0333)
ATGCAGCCGGTACATGCATCAACGCCCCGTGCGGGGGGTTTCGAACTGGT
GACGGTGCTCTCTCTGCTGTTGTTAAGGGGAGCAAGCTGTCTGCAATCAA
GCAGCTTGCGGGTCGGACCAAGACTAACAGACACGCTCCGAGTTACGTTC
GTGACGGGGAACATGAACAAGCTCGTGATGCAGCCGGTACATGCATCAAC
GCCCCGTGCGGGGGGTTTCGAACTGGTGACGGTGCTCTCTCTGCTGTTGT
TAAGGGGAGCAAGCTGTCTGCAATCAAGCAGCTTGCGGGTCGGACCAAGA
CTAACAGACACGCTCCGAGTTACGTTCGTGACGGGGAACATGAACAAGCT
CGTGGAATGTCAGATGATTTTGGCTGAGTCGAAGTTGCCTGTCGAGCTCG
TCAACCTGGATCTGGATCTCCCAGAGTACCAGGGCGACCATATCGAGGAA
TGTCAGATGATTTTGGCTGAGTCGAAGTTGCCTGTCGAGCTCGTCAACCT
GGATCTGGATCTCCCAGAGTACCAGGGCGACCATATCGAGATAGCGAGGC
AGAAGTGTATGTTGGCGGCGAGGAGAGTGGGCGGGCCGGTGCTAGTGGAG
GACACATCCCTGTGCTTCCAGGCCCTCAACGGCATGCCGGGACCGTACAT
CAAGTGGTTTGTGGAGATAGCGAGGCAGAAGTGTATGTTGGCGGCGAGGA
GAGTGGGCGGGCCGGTGCTAGTGGAGGACACATCCCTGTGCTTCCAGGCC
CTCAACGGCATGCCGGGACCGTACATCAAGTGGTTTGTGGAGAGCATCGG
CAACGACGGCCTGTACAAGCTGCTGGCGGCACACGAGGACAAGTCGGCTT
ACTCGCAGTGCGCAATGTCCTTCACCACGGGGCCGGGACAAGAACCTTGG
AGCATCGGCAACGACGGCCTGTACAAGCTGCTGGCGGCACACGAGGACAA
GTCGGCTTACTCGCAGTGCGCAATGTCCTTCACCACGGGGCCGGGACAAG
AACCTTGGGTGTTTGTGGGAAAATCGCACGGGACCATTGTGGAGCCCACG
GGCACCGGAGGGTTCGGCTGGGACGCCATTTTTCAGGTGTTTGTGGGAAA
ATCGCACGGGACCATTGTGGAGCCCACGGGCACCGGAGGGTTCGGCTGGG
ACGCCATTTTTCAGCCAGAAGGCCAGTCGGACACAATAGCACAGATGTCC
AAGGCGGCCAAGAACCGCATCTCGCACCGGGGGCGGGCGTTGGACAAGTT
CCAGCCAGAAGGCCAGTCGGACACAATAGCACAGATGTCCAAGGCGGCCA
AGAACCGCATCTCGCACCGGGGGCGGGCGTTGGACAAGTTCCAGGCGTTT
GTCAGCAGCAACATGGACTCTCTCCTGGGGGGCCTCGAGGGAGCACAATG
AGCGTTTGTCAGCAGCAACATGGACTCTCTCCTGGGGGGCCTCGAGGGAG
CACAATGA
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