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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | signal peptide |
| Exons | 1 |
| Model size | 1798 |
| Cds size | 1074 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817326.0899203-UTR-S-ischiensis_contig83:614509..614964 | 1622817326.0899203-UTR-S-ischiensis_contig83:614509..614964 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig83 614510..614964 + |
| 1695741028.3037622-UTR-S-ischiensis_contig83:614509..614964 | 1695741028.3037622-UTR-S-ischiensis_contig83:614509..614964 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig83 614510..614964 + |
| 1622817326.1125503-UTR-S-ischiensis_contig83:616038..616307 | 1622817326.1125503-UTR-S-ischiensis_contig83:616038..616307 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig83 616039..616307 + |
| 1695741028.3257575-UTR-S-ischiensis_contig83:616038..616307 | 1695741028.3257575-UTR-S-ischiensis_contig83:616038..616307 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig83 616039..616307 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817326.1015038-CDS-S-ischiensis_contig83:614964..616038 | 1622817326.1015038-CDS-S-ischiensis_contig83:614964..616038 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig83 614965..616038 + |
| 1695741028.3146522-CDS-S-ischiensis_contig83:614964..616038 | 1695741028.3146522-CDS-S-ischiensis_contig83:614964..616038 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig83 614965..616038 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig83.20033.1 >prot_S-ischiensis_contig83.20033.1 ID=prot_S-ischiensis_contig83.20033.1|Name=mRNA_S-ischiensis_contig83.20033.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=358bp
MTVTAAAAGAVTAAATAAVTRVAVMAAAVTAVATVPVSVAAPVAAATSVA
AASAIPEAAVAATAAAAVAAAAAAAVAEAVTETGRWPQASQCPETRMLGR
PGSTRHNAASLVFSMLWWPRTSSPEPPAASMTSSASVQPPTSGPKCEKGP
EAGRAPSPAASTPRSPRPRSACWWPGGLALGTRARPWPWGSCARGSPVSG
GGSFSCGTTPRSAHSSACKTTHTTASCETPSCPCFGGSAMSCPSRRMAPP
STTARGRPWTSSSRRDSYTPAGTTLDQSGPRRTCSSIPPSLTLAPCTCAA
LPAGRAGTPRRPWRSGKMNTIWVLSTQLATHSSPSPPRPTAPSTMSRSFS
SGRWQRR* back to topmRNA from alignment at S-ischiensis_contig83:614510..616307+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig83.20033.1 ID=mRNA_S-ischiensis_contig83.20033.1|Name=mRNA_S-ischiensis_contig83.20033.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1798bp|location=Sequence derived from alignment at S-ischiensis_contig83:614510..616307+ (Schizocladia ischiensis KU_0333)
CCGGCCTGCCGGCGCCCGCAGTGGCGGCGACGGTGGCGGCAGCCGCACCG
GCAGTGGGGGACCCGGACATGGCTGCACCGGCGGGGGCGGTGACTGGACG
GGTGGCGCCAGTGGCGGCAGCAGCGGCGGAGGCGGCCGTACTGGAGCCGG
TGGCAGTGCCGGCGACAATGCCGGCGGTGGCGGCGGCAACGGCGGCGGCA
GGAGCAGGGCCAGTGGCGATGGCGGGGGTGGCGGCAGTGAGGGCGGCGGA
GTGGTGGCCGTACGAGAGCTAGTGCCCGGCGTCGGTGACGGTGGCAGTGC
CGGCGGTGGCGGCAGCGGCAGCAGCGACGGTGGCGGTGGTGGCGGTAACG
ACGGCAGTGGGGGTGGCGGCAGCGGCCTCGGCGGTGGGGAACCCAGTGGT
GGCGGCGCCCGCGGTGGAGGCGACGGGGGGCCAAGCGACAACGGCAACAG
CGGTTATGACTGTGACGGCAGCAGCGGCAGGGGCTGTAACGGCGGCGGCC
ACAGCAGCGGTGACGAGGGTGGCGGTGATGGCGGCGGCGGTGACGGCAGT
GGCCACGGTGCCGGTGTCGGTGGCCGCGCCCGTGGCGGCGGCCACATCAG
TGGCAGCGGCATCGGCAATTCCGGAGGCGGCAGTGGCGGCGACGGCGGCG
GCGGCAGTGGCGGCGGCGGCGGCGGCGGCAGTGGCGGAGGCAGTAACGGA
GACGGGGCGGTGGCCGCAGGCGAGCCAGTGCCCGGAGACCCGGATGCTCG
GCCGCCCCGGGTCGACACGGCACAACGCCGCATCTCTCGTCTTCTCCATG
CTGTGGTGGCCGAGGACCTCCTCGCCCGAGCCGCCTGCCGCATCAATGAC
GTCGAGCGCGAGCGTGCAGCCGCCCACATCCGGTCCCAAATGCGAAAAGG
GGCCGGAAGCTGGACGGGCTCCAAGCCCCGCTGCCAGCACACCACGTTCG
CCAAGGCCGCGTTCCGCGTGCTGGTGGCCCGGTGGCTTGGCATTGGGGAC
GCGGGCGAGGCCATGGCCCTGGGGCTCCTGTGCCCGGGGATCACCTGTCT
CAGGCGGGGGCAGCTTCTCATGTGGCACCACGCCGAGGTCTGCACACAGC
TCGGCCTGCAAAACCACGCACACCACGGCTTCGTGTGAGACGCCATCCTG
CCCCTGCTTCGGGGGGAGTGCCATGTCATGCCCCTCCAGGAGGATGGCTC
CGCCTTCCACGACGGCTCGGGGAAGGCCATGGACATCTTCGTCCCGCAGG
GACAGCTACACACCAGCCGGGACCACCCTGGACCAGAGTGGGCCTCGAAG
AACCTGCTCATCGATTCCACCATCACTCACCCTGGCACCGTGCACCTGCG
CGGCCCTGCCAGCCGGGAGGGCGGGCACGCCGCGGAGGCCGTGGCGAAGC
GGAAAAATGAACACTATCTGGGTTCTTTCGACCCAGCTAGCAACGCACTC
ATCCCCTTCGCCGCCGAGGCCCACGGCACCCTCAACCATGAGTCGGAGCT
TCTCATCCGGGAGATGGCAACGCAGGTAGCTGGTGACCCTGCGCCCCCCG
GCTTCAACGCTCTGTGACGGGCGTCTTGCGTACATGGAGCACGCGAGCGC
CTCTCGTGCGTGCTACAGTGCCTCCAGTCCTGGCGGCTGCTCACCGCCGC
ATCTCTGGCGTCACGCGCTCGTGCGCGGGGCAACCTCCATGGTGCTGGCG
GCGGTAGCAGAGGTGGCGGCCGTGGTGGCAGCAGGGGAGGGGGCAGCGAC
AGCGGAGGCAGTGGCGACGGTGGCGGGGGAGGGGACAGCGGCAGCAGC back to topCoding sequence (CDS) from alignment at S-ischiensis_contig83:614510..616307+ >mRNA_S-ischiensis_contig83.20033.1 ID=mRNA_S-ischiensis_contig83.20033.1|Name=mRNA_S-ischiensis_contig83.20033.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2148bp|location=Sequence derived from alignment at S-ischiensis_contig83:614510..616307+ (Schizocladia ischiensis KU_0333)
ATGACTGTGACGGCAGCAGCGGCAGGGGCTGTAACGGCGGCGGCCACAGC
AGCGGTGACGAGGGTGGCGGTGATGGCGGCGGCGGTGACGGCAGTGGCCA
CGGTGCCGGTGTCGGTGGCCGCGCCCGTGGCGGCGGCCACATCAGTGGCA
GCGGCATCGGCAATTCCGGAGGCGGCAGTGGCGGCGACGGCGGCGGCGGC
AGTGGCGGCGGCGGCGGCGGCGGCAGTGGCGGAGGCAGTAACGGAGACGG
GGCGGTGGCCGCAGGCGAGCCAGTGCCCGGAGACCCGGATGCTCGGCCGC
CCCGGGTCGACACGGCACAACGCCGCATCTCTCGTCTTCTCCATGCTGTG
GTGGCCGAGGACCTCCTCGCCCGAGCCGCCTGCCGCATCAATGACGTCGA
GCGCGAGCGTGCAGCCGCCCACATCCGGTCCCAAATGCGAAAAGGGGCCG
GAAGCTGGACGGGCTCCAAGCCCCGCTGCCAGCACACCACGTTCGCCAAG
GCCGCGTTCCGCGTGCTGGTGGCCCGGTGGCTTGGCATTGGGGACGCGGG
CGAGGCCATGGCCCTGGGGCTCCTGTGCCCGGGGATCACCTGTCTCAGGC
GGGGGCAGCTTCTCATGTGGCACCACGCCGAGGTCTGCACACAGCTCGGC
CTGCAAAACCACGCACACCACGGCTTCGTGTGAGACGCCATCCTGCCCCT
GCTTCGGGGGGAGTGCCATGTCATGCCCCTCCAGGAGGATGGCTCCGCCT
TCCACGACGGCTCGGGGAAGGCCATGGACATCTTCGTCCCGCAGGGACAG
CTACACACCAGCCGGGACCACCCTGGACCAGAGTGGGCCTCGAAGAACCT
GCTCATCGATTCCACCATCACTCACCCTGGCACCGTGCACCTGCGCGGCC
CTGCCAGCCGGGAGGGCGGGCACGCCGCGGAGGCCGTGGCGAAGCGGAAA
AATGAACACTATCTGGGTTCTTTCGACCCAGCTAGCAACGCACTCATCCC
CTTCGCCGCCGAGGCCCACGGCACCCTCAACCATGAGTCGGAGCTTCTCA
TCCGGGAGATGGCAACGCAGGTAGATGACTGTGACGGCAGCAGCGGCAGG
GGCTGTAACGGCGGCGGCCACAGCAGCGGTGACGAGGGTGGCGGTGATGG
CGGCGGCGGTGACGGCAGTGGCCACGGTGCCGGTGTCGGTGGCCGCGCCC
GTGGCGGCGGCCACATCAGTGGCAGCGGCATCGGCAATTCCGGAGGCGGC
AGTGGCGGCGACGGCGGCGGCGGCAGTGGCGGCGGCGGCGGCGGCGGCAG
TGGCGGAGGCAGTAACGGAGACGGGGCGGTGGCCGCAGGCGAGCCAGTGC
CCGGAGACCCGGATGCTCGGCCGCCCCGGGTCGACACGGCACAACGCCGC
ATCTCTCGTCTTCTCCATGCTGTGGTGGCCGAGGACCTCCTCGCCCGAGC
CGCCTGCCGCATCAATGACGTCGAGCGCGAGCGTGCAGCCGCCCACATCC
GGTCCCAAATGCGAAAAGGGGCCGGAAGCTGGACGGGCTCCAAGCCCCGC
TGCCAGCACACCACGTTCGCCAAGGCCGCGTTCCGCGTGCTGGTGGCCCG
GTGGCTTGGCATTGGGGACGCGGGCGAGGCCATGGCCCTGGGGCTCCTGT
GCCCGGGGATCACCTGTCTCAGGCGGGGGCAGCTTCTCATGTGGCACCAC
GCCGAGGTCTGCACACAGCTCGGCCTGCAAAACCACGCACACCACGGCTT
CGTGTGAGACGCCATCCTGCCCCTGCTTCGGGGGGAGTGCCATGTCATGC
CCCTCCAGGAGGATGGCTCCGCCTTCCACGACGGCTCGGGGAAGGCCATG
GACATCTTCGTCCCGCAGGGACAGCTACACACCAGCCGGGACCACCCTGG
ACCAGAGTGGGCCTCGAAGAACCTGCTCATCGATTCCACCATCACTCACC
CTGGCACCGTGCACCTGCGCGGCCCTGCCAGCCGGGAGGGCGGGCACGCC
GCGGAGGCCGTGGCGAAGCGGAAAAATGAACACTATCTGGGTTCTTTCGA
CCCAGCTAGCAACGCACTCATCCCCTTCGCCGCCGAGGCCCACGGCACCC
TCAACCATGAGTCGGAGCTTCTCATCCGGGAGATGGCAACGCAGGTAG back to top
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