mRNA_S-ischiensis_contig83.19986.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig83.19986.1 vs. uniprot
Match: D7G007_ECTSI (BZIP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G007_ECTSI) HSP 1 Score: 147 bits (372), Expect = 6.110e-39 Identity = 75/125 (60.00%), Postives = 96/125 (76.80%), Query Frame = 1
Query: 136 REHARNTRLRKKAFVEELKKQVEQLAEAREKEERDRLGDVRRQGALQDHMTQVLRSFLEYRGSGEAGRKVWTSVVEEDFELRLPITPYRSYPLHQVQGGERIVHGVDAVMADAASLKLAVETASP 510
REHARNTRLRKKAFVEELKKQVE+L RE+EE D+ + RR +L++ QVL +FLEYRG E GRK W SV++E FE+++PITPYRS+P QVQGG+R++ G+D V+AD SL +A + SP
Sbjct: 52 REHARNTRLRKKAFVEELKKQVEELVSGREREEMDQRAEARRVASLREIRLQVLLTFLEYRGRCELGRKEWQSVLDEQFEMQMPITPYRSFPPQQVQGGKRVIKGLDGVIADTLSLSVATKGPSP 176
BLAST of mRNA_S-ischiensis_contig83.19986.1 vs. uniprot
Match: A0A6H5KRD8_9PHAE (BZIP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRD8_9PHAE) HSP 1 Score: 148 bits (374), Expect = 2.340e-38 Identity = 76/125 (60.80%), Postives = 96/125 (76.80%), Query Frame = 1
Query: 136 REHARNTRLRKKAFVEELKKQVEQLAEAREKEERDRLGDVRRQGALQDHMTQVLRSFLEYRGSGEAGRKVWTSVVEEDFELRLPITPYRSYPLHQVQGGERIVHGVDAVMADAASLKLAVETASP 510
REHARNTRLRKKAFVEELKKQVE+L RE+EE DR + RR +L++ QVL +FLEYRG E GRK W SV++E FE+++PITPYRS+P QVQGG+R++ G+D V+AD SL +A + SP
Sbjct: 273 REHARNTRLRKKAFVEELKKQVEELVSGREREEMDRRAEERRVASLREIRLQVLLTFLEYRGRCELGRKEWQSVLDEQFEMQMPITPYRSFPPQQVQGGKRVIKGLDGVIADTLSLSVATKGPSP 397
BLAST of mRNA_S-ischiensis_contig83.19986.1 vs. uniprot
Match: A0A7S2UTL0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UTL0_9STRA) HSP 1 Score: 137 bits (346), Expect = 3.260e-36 Identity = 67/122 (54.92%), Postives = 92/122 (75.41%), Query Frame = 1
Query: 136 REHARNTRLRKKAFVEELKKQVEQLAEAREKEERDRLGDVRRQGALQDHMTQVLRSFLEYRGSGEAGRKVWTSVVEEDFELRLPITPYRSYPLHQVQGGERIVHGVDAVMADAASLKLAVET 501
REHARNTRLRKKAFVEELK+QV+ LA RE E+R+R + +R+ A+ QVL++F+EYRGSGE +W +++ DF +RLP+TPYRS P Q +GG R +HG+DAV+AD S++L +E+
Sbjct: 185 REHARNTRLRKKAFVEELKRQVQDLAAVRESEQRERQLEDQRKSAMNQVRFQVLQTFMEYRGSGETNESLWAAILSPDFRMRLPLTPYRSCPASQERGGSRYLHGIDAVVADTTSIRLFLES 306
BLAST of mRNA_S-ischiensis_contig83.19986.1 vs. uniprot
Match: A0A7S3YIB3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YIB3_HETAK) HSP 1 Score: 130 bits (327), Expect = 3.700e-33 Identity = 66/121 (54.55%), Postives = 92/121 (76.03%), Query Frame = 1
Query: 136 REHARNTRLRKKAFVEELKKQVEQLAEAREKEERDRLGDVRRQGALQDHMTQVLRSFLEYRGSGEAGRKVWTSVVEEDFELRLPITPYRSYPLHQVQGGERIVHGVDAVMADAASLKLAVE 498
REHARNTRLRKKAFV+ELKKQV+ LA ARE+EER+R + +R A+ + QVL +FL+YRG G +W+S+++E F +R+P+TPYRS+P QVQ G R V G++ V+AD ASL++ ++
Sbjct: 125 REHARNTRLRKKAFVDELKKQVQDLAAAREREERERHLESQRSAAMNEIRFQVLATFLDYRGRGVKDLSLWSSILDEQFMMRMPLTPYRSFPQSQVQDGARKVKGIEDVLADVASLQVMLD 245
BLAST of mRNA_S-ischiensis_contig83.19986.1 vs. uniprot
Match: W7TH74_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TH74_9STRA) HSP 1 Score: 109 bits (272), Expect = 3.290e-24 Identity = 62/123 (50.41%), Postives = 83/123 (67.48%), Query Frame = 1
Query: 136 REHARNTRLRKKAFVEELKKQVEQLAEAREKEERDRLGDVRRQGALQD--HMTQVLRSFLEYRGSGEAGRKVWTSVVEEDFELRLPITPYRSYPLHQVQGGERIVHGVDAVMADAASLKLAVE 498
REHARNTRLRKKA+ ++LK+ V+ L R+++E DR DV AL++ H V+ SFL R E R+ W V++ED L LPITPYR +P +V G R+V G+DAVMADA+SL+L +E
Sbjct: 398 REHARNTRLRKKAYTKKLKELVDDLE--RQRKEEDRAKDVLASRALEEVHHRNTVVHSFLHCRARDERDRRKWAQVLDEDCVLTLPITPYRFFPRGEVHNGVRVVQGLDAVMADASSLRLLME 518
BLAST of mRNA_S-ischiensis_contig83.19986.1 vs. uniprot
Match: A0A836CN81_9STRA (BZIP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN81_9STRA) HSP 1 Score: 102 bits (255), Expect = 4.780e-22 Identity = 56/122 (45.90%), Postives = 78/122 (63.93%), Query Frame = 1
Query: 136 REHARNTRLRKKAFVEELKKQVEQLAEAREKEERDRLGDVRRQGALQDHMTQVLRSFLEYRGSGEAGRKVWTSVVEEDFELRLPITPYRSYPLHQVQGGERIVHGVDAVMADAASLKLAVET 501
R+HARNTRLRKKA++EEL++ V+QL R+ + + R LQ VL+ L YR +G R W + +EE F LPITPYRS+P +V G+R++ G+DA++AD ASL L VE+
Sbjct: 122 RKHARNTRLRKKAYIEELERTVQQLTAERDAAAAAKAAEGARAAQLQSVRFSVLQMALFYRAAGNTCRADWATALEESFTCVLPITPYRSFPSAEVVSGQRMIVGIDAMIADVASLALMVES 243
BLAST of mRNA_S-ischiensis_contig83.19986.1 vs. uniprot
Match: W7TPI1_9STRA (Uncharacterized protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7TPI1_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 5.750e-20 Identity = 52/124 (41.94%), Postives = 79/124 (63.71%), Query Frame = 1
Query: 136 REHARNTRLRKKAFVEELKKQVEQLAEAREKEERDRLGDVRRQGALQDHMTQVLRSFLEYRGSGEAGRKVWTSVVEEDFELRLPITPYRSYPLHQVQGGERIVHGVDAVMADAASLKLAVETAS 507
REHARNTRLRKKA++E L+ Q++ L++A++KE++ L R + L++FL YR GE R+ W ++ EDF L+LP+TPYR +P V+ R V G+DA + D AS + +++ S
Sbjct: 264 REHARNTRLRKKAYIETLRHQLQSLSDAKDKEDKTELVSHVRSLEGRKLKKARLQTFLLYRARGELDRRKWAVLLAEDFVLKLPLTPYRYFPAGDVEQHARYVRGIDATIRDTASFTVLIDSLS 387
BLAST of mRNA_S-ischiensis_contig83.19986.1 vs. uniprot
Match: B8CAF7_THAPS (PAS domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CAF7_THAPS) HSP 1 Score: 96.7 bits (239), Expect = 8.670e-20 Identity = 53/126 (42.06%), Postives = 79/126 (62.70%), Query Frame = 1
Query: 136 REHARNTRLRKKAFVEELKKQVEQLAEAREKEERDRLGDVRRQGALQDHMTQVLRSFLEYRGSGEAGRKVWTSVVEEDFELRLPITPYRSYPLHQVQGGERIVHGVDAVMADAASLKLAVETASPR 513
REHAR TRLRKKA+V +LK+ V+ L R ++ R R V+ +QD +V+ +FL Y E W +++EEDF L+ P+TPYRS+ ++ G RI+ GV+A++ DAAS+ + +ET R
Sbjct: 338 REHARCTRLRKKAYVSKLKELVDGLQAERSEDSRKRRVAVQHLAEIQDIRRKVMHTFLGYHAKFEGDVGKWKTILEEDFWLKQPVTPYRSFRRTEIDKGSRILKGVNAMIGDAASMSVMIETIGSR 463
BLAST of mRNA_S-ischiensis_contig83.19986.1 vs. uniprot
Match: B7FWL4_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FWL4_PHATC) HSP 1 Score: 95.5 bits (236), Expect = 2.130e-19 Identity = 50/121 (41.32%), Postives = 81/121 (66.94%), Query Frame = 1
Query: 136 REHARNTRLRKKAFVEELKKQVEQLAEAREKEERDRLGDVRRQGALQDHMTQVLRSFLEYRGSGEAGRKVWTSVVEEDFELRLPITPYRSYPLHQVQGGERIVHGVDAVMADAASLKLAVE 498
REHAR+TRLRKKA+V++L++ VE L R +E R R ++ Q+ +V+R+FL+Y + E + W +++E+DF L+ P+TPYRS+P +++ RI G+D+++ D ASL + VE
Sbjct: 207 REHARSTRLRKKAYVQKLRELVEGLHSERTEEVRRRRVAIQHLAEKQNVRKKVVRNFLQYGSNYETDERKWGTILEDDFYLKQPVTPYRSFPRAEIEKECRISRGIDSIINDGASLSVMVE 327
BLAST of mRNA_S-ischiensis_contig83.19986.1 vs. uniprot
Match: A0A7S4DJE8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DJE8_HETAK) HSP 1 Score: 94.0 bits (232), Expect = 6.700e-19 Identity = 55/126 (43.65%), Postives = 80/126 (63.49%), Query Frame = 1
Query: 136 REHARNTRLRKKAFVEELKKQVEQLAEAREKEERDRLGDVRRQGALQDHMTQVLRSFLEYRGSGEAGRKVWTSVVEEDFELRLPITPYRSYPLHQVQGGE-----RIVHGVDAVMADAASLKLAVE 498
RE+ARNTRLRKK ++E+LK QV++L A+E+ ER+ +R + QVL FL RG+GEA + W+++++E F L LP TPYRS+ ++ GG R V G++ V+AD SL L +E
Sbjct: 205 RENARNTRLRKKLYIEKLKAQVDELQAAQERREREERVRAQRAADRRRVRVQVLTDFLLCRGTGEASYQQWSTLLDERFALTLPATPYRSFLQSELVGGPGGPPLRRVRGIEGVLADTRSLALLLE 330 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig83.19986.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig83.19986.1 >prot_S-ischiensis_contig83.19986.1 ID=prot_S-ischiensis_contig83.19986.1|Name=mRNA_S-ischiensis_contig83.19986.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=194bp GAHAHSSAAAAAQAQAQAASDAAERKRKRSAMSKEERAKQNRDRNREHARback to top mRNA from alignment at S-ischiensis_contig83:257654..262666+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig83.19986.1 ID=mRNA_S-ischiensis_contig83.19986.1|Name=mRNA_S-ischiensis_contig83.19986.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=5013bp|location=Sequence derived from alignment at S-ischiensis_contig83:257654..262666+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig83:257654..262666+ >mRNA_S-ischiensis_contig83.19986.1 ID=mRNA_S-ischiensis_contig83.19986.1|Name=mRNA_S-ischiensis_contig83.19986.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1164bp|location=Sequence derived from alignment at S-ischiensis_contig83:257654..262666+ (Schizocladia ischiensis KU_0333)back to top |