mRNA_S-ischiensis_contig83.19972.1 (mRNA) Schizocladia ischiensis KU_0333
|
Overview
Homology
BLAST of mRNA_S-ischiensis_contig83.19972.1 vs. uniprot
Match: A0A2G5CD63_AQUCA (Glutaredoxin domain-containing protein n=2 Tax=Thalictroideae TaxID=1463137 RepID=A0A2G5CD63_AQUCA) HSP 1 Score: 97.8 bits (242), Expect = 2.840e-23 Identity = 51/94 (54.26%), Postives = 64/94 (68.09%), Query Frame = 1
Query: 253 IQASPVVVFSKTTCPFCKKVKRLFADLGGTPSPDYVELNMFAKGPQVQAVLASLTGQRTVPNVFVGGVHLGGASEVTRLARDGALRPALLRAGV 534
I + PVVVFSKT CP+C VK+LF+DLG T +EL+ + G +VQ+ LA L+GQRTVPNVF+GG H+GG VT + G L P L AGV
Sbjct: 10 IASDPVVVFSKTFCPYCVSVKKLFSDLGVTYKA--IELDRESDGSEVQSALAELSGQRTVPNVFIGGKHVGGCDTVTSIHNAGKLVPMLTEAGV 101
BLAST of mRNA_S-ischiensis_contig83.19972.1 vs. uniprot
Match: A0A6P8CPX3_PUNGR (glutaredoxin-like n=2 Tax=Punica granatum TaxID=22663 RepID=A0A6P8CPX3_PUNGR) HSP 1 Score: 98.6 bits (244), Expect = 3.110e-23 Identity = 51/93 (54.84%), Postives = 64/93 (68.82%), Query Frame = 1
Query: 253 IQASPVVVFSKTTCPFCKKVKRLFADLGGTPSPDYVELNMFAKGPQVQAVLASLTGQRTVPNVFVGGVHLGGASEVTRLARDGALRPALLRAG 531
+ A+PVVVFSK+ CPFC +VK+L ADLG T +EL+ G +VQA LA TGQRTVPNVF+GG H+GG + T + DG L P L +AG
Sbjct: 37 VAANPVVVFSKSYCPFCVQVKQLLADLGATFKA--IELDQEKDGEEVQAALAEWTGQRTVPNVFIGGNHIGGCDKTTAMNGDGKLVPLLTQAG 127
BLAST of mRNA_S-ischiensis_contig83.19972.1 vs. uniprot
Match: G4WMT5_WOLAR (Putative glutaredoxin-like protein n=1 Tax=Wolffia arrhiza TaxID=161111 RepID=G4WMT5_WOLAR) HSP 1 Score: 97.4 bits (241), Expect = 4.490e-23 Identity = 51/101 (50.50%), Postives = 66/101 (65.35%), Query Frame = 1
Query: 229 SEKAVQARIQASPVVVFSKTTCPFCKKVKRLFADLGGTPSPDYVELNMFAKGPQVQAVLASLTGQRTVPNVFVGGVHLGGASEVTRLARDGALRPALLRAG 531
+++ Q I + PVVVFSKT CP+C +VK+L +LG + +EL+ G QVQA LA LTGQRTVPNVF+GG H+GG +T + R G L P L AG
Sbjct: 2 AQQKAQEIIASDPVVVFSKTYCPYCTRVKKLLTELGARFN--VIELDRENDGSQVQAALAGLTGQRTVPNVFIGGKHIGGCDTLTEIHRGGKLVPLLTEAG 100
BLAST of mRNA_S-ischiensis_contig83.19972.1 vs. uniprot
Match: A0A6P4DP84_ARADU (glutaredoxin n=2 Tax=Arachis TaxID=3817 RepID=A0A6P4DP84_ARADU) HSP 1 Score: 97.4 bits (241), Expect = 4.490e-23 Identity = 50/93 (53.76%), Postives = 61/93 (65.59%), Query Frame = 1
Query: 253 IQASPVVVFSKTTCPFCKKVKRLFADLGGTPSPDYVELNMFAKGPQVQAVLASLTGQRTVPNVFVGGVHLGGASEVTRLARDGALRPALLRAG 531
+ ++PVVVFSKT CPFC +VK LF LG T +ELN A G ++Q+ LA TGQRTVPNVF+GG H+GG T L G L P L +AG
Sbjct: 10 VSSNPVVVFSKTYCPFCVEVKELFTKLGVTIK--VIELNTEADGSEIQSALAEWTGQRTVPNVFIGGNHIGGCDATTNLHNQGELVPLLTKAG 100
BLAST of mRNA_S-ischiensis_contig83.19972.1 vs. uniprot
Match: A0A8J5FWW6_ZINOF (Glutaredoxin domain-containing protein n=2 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5FWW6_ZINOF) HSP 1 Score: 97.1 bits (240), Expect = 6.000e-23 Identity = 50/94 (53.19%), Postives = 64/94 (68.09%), Query Frame = 1
Query: 253 IQASPVVVFSKTTCPFCKKVKRLFADLGGTPSPDYVELNMFAKGPQVQAVLASLTGQRTVPNVFVGGVHLGGASEVTRLARDGALRPALLRAGV 534
+ A+PVVVFSKT CPFC KVK+L LG VEL++ + GP++QA LA+ TGQRTVPNVF+GG H+GG ++G L P L+ AGV
Sbjct: 10 VAANPVVVFSKTHCPFCVKVKQLLDQLGAKYKA--VELDVESDGPEIQAALAAWTGQRTVPNVFIGGKHIGGCDTCVAKHKEGNLVPLLVEAGV 101
BLAST of mRNA_S-ischiensis_contig83.19972.1 vs. uniprot
Match: A0A7C9DCQ9_OPUST (Glutathione-disulfide reductase n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9DCQ9_OPUST) HSP 1 Score: 96.7 bits (239), Expect = 8.480e-23 Identity = 55/102 (53.92%), Postives = 66/102 (64.71%), Query Frame = 1
Query: 226 ASEKAVQARIQASPVVVFSKTTCPFCKKVKRLFADLGGTPSPDYVELNMFAKGPQVQAVLASLTGQRTVPNVFVGGVHLGGASEVTRLARDGALRPALLRAG 531
A EKA Q + +PVVVFSKT CPFC VK+L +DLG S +EL+ + G +VQA LA TGQ+TVPNVFVGG H+GG T + R G L P L AG
Sbjct: 2 AMEKAKQL-VSTNPVVVFSKTLCPFCIDVKKLLSDLG--VSFKAIELDTESDGSEVQAALAEWTGQKTVPNVFVGGKHIGGCDATTAMHRGGKLMPLLTEAG 100
BLAST of mRNA_S-ischiensis_contig83.19972.1 vs. uniprot
Match: A0A6P5ZGL0_DURZI (glutaredoxin-like n=1 Tax=Durio zibethinus TaxID=66656 RepID=A0A6P5ZGL0_DURZI) HSP 1 Score: 96.7 bits (239), Expect = 8.720e-23 Identity = 50/93 (53.76%), Postives = 62/93 (66.67%), Query Frame = 1
Query: 253 IQASPVVVFSKTTCPFCKKVKRLFADLGGTPSPDYVELNMFAKGPQVQAVLASLTGQRTVPNVFVGGVHLGGASEVTRLARDGALRPALLRAG 531
+ A+PVVVFSKT CPFC KVK+L LG S +EL+ + G ++QA LA TGQRTVPNVF+GG H+GG T + +DG L P L AG
Sbjct: 10 VSANPVVVFSKTHCPFCVKVKQLLQQLGA--SFKAIELDNESDGVEIQAALAQWTGQRTVPNVFIGGKHIGGCDATTAMHKDGKLIPLLTEAG 100
BLAST of mRNA_S-ischiensis_contig83.19972.1 vs. uniprot
Match: A0A7S0QRJ5_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0QRJ5_9CHLO) HSP 1 Score: 95.9 bits (237), Expect = 1.650e-22 Identity = 51/101 (50.50%), Postives = 63/101 (62.38%), Query Frame = 1
Query: 232 EKAVQARIQASPVVVFSKTTCPFCKKVKRLFADLGGTPSPDYVELNMFAKGPQVQAVLASLTGQRTVPNVFVGGVHLGGASEVTRLARDGALRPALLRAGV 534
E +Q +PV+V+SK+ CPFC K K+LF +G TP +EL+ A G ++QA LA LTGQRTVPNVFVGG HLGG + R G L L AGV
Sbjct: 2 EATIQTNNTTNPVMVYSKSYCPFCDKTKKLFGSMGVTPK--VIELDKIADGDKMQATLAKLTGQRTVPNVFVGGKHLGGNDDTHSKHRTGELTKMLESAGV 100
BLAST of mRNA_S-ischiensis_contig83.19972.1 vs. uniprot
Match: A0A072TXU3_MEDTR (Glutaredoxin C4 n=2 Tax=IRL clade TaxID=2233839 RepID=A0A072TXU3_MEDTR) HSP 1 Score: 95.5 bits (236), Expect = 2.460e-22 Identity = 49/93 (52.69%), Postives = 61/93 (65.59%), Query Frame = 1
Query: 253 IQASPVVVFSKTTCPFCKKVKRLFADLGGTPSPDYVELNMFAKGPQVQAVLASLTGQRTVPNVFVGGVHLGGASEVTRLARDGALRPALLRAG 531
+ ++PVVVFSK+ CPFC +VK+LF DLG T VEL+ + G ++Q LA TGQRTVPNVF+GG H+GG T L G L P L AG
Sbjct: 10 VSSNPVVVFSKSYCPFCVQVKKLFTDLGVTFKA--VELDSESDGSEIQGALAQWTGQRTVPNVFIGGNHIGGCDSTTNLQNQGKLVPLLTSAG 100
BLAST of mRNA_S-ischiensis_contig83.19972.1 vs. uniprot
Match: A0A076KWF9_TOBAC (Gluaredoxin n=3 Tax=Solanaceae TaxID=4070 RepID=A0A076KWF9_TOBAC) HSP 1 Score: 95.5 bits (236), Expect = 2.530e-22 Identity = 51/93 (54.84%), Postives = 61/93 (65.59%), Query Frame = 1
Query: 253 IQASPVVVFSKTTCPFCKKVKRLFADLGGTPSPDYVELNMFAKGPQVQAVLASLTGQRTVPNVFVGGVHLGGASEVTRLARDGALRPALLRAG 531
+ A+PVVVFSKT CPFC VK L + LG S + VEL+ G ++QA LA TGQRTVPNVF+GG H+GG T L R+G L P L AG
Sbjct: 10 VSANPVVVFSKTYCPFCVSVKDLLSKLGA--SFNAVELDTEKDGSEIQAALAEWTGQRTVPNVFIGGKHIGGCDATTALHREGKLVPLLTEAG 100 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig83.19972.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig83.19972.1 >prot_S-ischiensis_contig83.19972.1 ID=prot_S-ischiensis_contig83.19972.1|Name=mRNA_S-ischiensis_contig83.19972.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=180bp KVAGNVAFQSCRAGAGARGRVRRDVDACNRLQLRSCAPRLAAAAAAPEAFback to top mRNA from alignment at S-ischiensis_contig83:203152..205574- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig83.19972.1 ID=mRNA_S-ischiensis_contig83.19972.1|Name=mRNA_S-ischiensis_contig83.19972.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=2423bp|location=Sequence derived from alignment at S-ischiensis_contig83:203152..205574- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig83:203152..205574- >mRNA_S-ischiensis_contig83.19972.1 ID=mRNA_S-ischiensis_contig83.19972.1|Name=mRNA_S-ischiensis_contig83.19972.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1080bp|location=Sequence derived from alignment at S-ischiensis_contig83:203152..205574- (Schizocladia ischiensis KU_0333)back to top |