mRNA_S-ischiensis_contig83.19970.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig83.19970.1
Unique NamemRNA_S-ischiensis_contig83.19970.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
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BLAST of mRNA_S-ischiensis_contig83.19970.1 vs. uniprot
Match: D8LC94_ECTSI (SET domain and mariner transposase fusion n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC94_ECTSI)

HSP 1 Score: 162 bits (410), Expect = 1.200e-38
Identity = 110/315 (34.92%), Postives = 147/315 (46.67%), Query Frame = 3 
Query:  120 SSSRLVHLLPWQDLVSLASASRSFRNDVREALRDARVDLSGGLDPQPVAC------------AGRDACDPSSEAAQGGLGGPLPAPFSYAVRNAYPFGLVREEDADTLQGCTCSGSCPALLGPEDGSDPSDRMVCACALLNIAAGSEHVARFECHSGCGCGPGCPLRATQPLEAAPFPGGGRAGKHRDWCSRTAPSFRAVPGRGGATGSPVPPRLLVKHTGAKGWGVIALDGVAAGAFVAEYTGEVLPVEVAREHAAKYDDQGGANYLITVLERFPATGQVWRTAVDATRLGSAARFFNHSCDPCLDMHV--VRR 1022
            ++S L+  L W+D V+ A  S      V+  ++    D+S G  P P+ C            A       SS++ +  LGGP+P  F Y     + F    +  AD L+GC C G C             D  +C C  LN+A  S     FECH+ C CG  C LRATQ                                RG A  S VPP L +++ G KGWG  ++  +A G +VA+YTGEVLPV  AR     YD + G NY++T  E F    QV++T VDAT  G+ +RFFNHSC+P L + V  VRR
Sbjct:   14 TTSTLLSFLGWEDAVAFAITSTLLFVQVKAIIQKQCDDISCGSSPYPIPCDSAHRPLHGVQQATPGGSSHSSQSFKWSLGGPVPPSFMYLNEAIHAFD---DSGADELEGCACFGGCGV-----------DDTLCPCVQLNVAVQSGPAPLFECHTSCTCGIACRLRATQ--------------------------------RGAA--SKVPPMLRLRYMGKKGWGAYSVGAIAGGTYVADYTGEVLPVPEARRRVHAYD-RDGLNYVLTTQEFFQGGKQVFQTIVDATTCGNVSRFFNHSCEPTLSVFVAVVRR 279
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BLAST of mRNA_S-ischiensis_contig83.19970.1 vs. uniprot
Match: A0A7L2TEZ0_POMRU (SETMR methyltransferase (Fragment) n=1 Tax=Pomatostomus ruficeps TaxID=9176 RepID=A0A7L2TEZ0_POMRU)

HSP 1 Score: 115 bits (287), Expect = 4.760e-25
Identity = 79/189 (41.80%), Postives = 92/189 (48.68%), Query Frame = 3 
Query:  537 FECHSGCGCGPGCPLRATQPLEAAPFPGGGRAGKHRDWCSRTAPSFRAVPGRGGATGSPVPPRLLVKHTGAKGWGVIALDGVAAGAFVAEYTGEVLPVEVAREHAAKYDDQGGANYLITVLERFPATGQVWRTAVDATRLGSAARFFNHSCDPCLDMHVVRRGSLLPHLVLVARRAIPAGSELTFDYGG 1103
            FEC S CGCGPGC  R  Q                                RG      +  RL V  T  KGWGV AL+ VAAG+FV EY GEVL    AR  +     Q   NY+I V E     G+V  T VD TR+G+  RF NHSC+P L M  VR  S++P L L A   IPAG EL++DY G
Sbjct:   69 FECSSLCGCGPGCQNRLVQ--------------------------------RG------LRLRLQVFRTRCKGWGVRALEPVAAGSFVCEYAGEVLGAAEARRRSRAQAPQD-PNYIIAVREHLH-DGRVLETFVDPTRVGNVGRFLNHSCEPNLFMVPVRVDSMVPRLALFAATDIPAGEELSYDYSG 217
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BLAST of mRNA_S-ischiensis_contig83.19970.1 vs. uniprot
Match: A0A1Y2BZA1_9FUNG (SET domain-containing protein n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2BZA1_9FUNG)

HSP 1 Score: 104 bits (259), Expect = 2.510e-21
Identity = 81/257 (31.52%), Postives = 114/257 (44.36%), Query Frame = 3 
Query:  342 FSYAVRNAYPFGLVREEDADTLQGCTCSGSCPALLGPEDGSDPSDRMVCACALLNIAAGSEHVARFECHSGCGCGPGCPLRATQPLEAAPFPGGGRAGKHRDWCSRTAPSFRAVPGRGGATGSPVPPRLLVKHTGAKGWGVIALDGVAAGAFVAEYTGEVLPVEVAREHAAKYDDQGGANYLITVLERFPATGQVWRTAVDATRLGSAARFFNHSCDPCLDMHVVRRGSLLPHLVLVARRAIPAGSELTFDYGGSQG 1112
            F+Y  RN    G    E +D  +GC C GSC          D  +  +C+C        +E    +         PGC L  T P  +  F       +    CS +   F  V G+G      +     V  T  KG+ +++ + +  G FV EY GE++  + AR   A   +    NY+I V E      + +RT +D ++ G+AARF NHSC P L    VR  SL+P   L A R I AG EL+FDYG + G
Sbjct:   11 FTYRARNTLLGGESLGESSD-YEGCCCEGSC---------GDTINAAICSCL-------AERGQAYRIDK-----PGC-LDVTFPESSPIF-------ECNINCSCSLECFNRVVGKG------ITRPFTVVETEGKGFALVSDNAIEKGQFVMEYAGEIIRADEARRRWAIQREMKLPNYIICVKEH--TNSKTYRTNIDPSKFGNAARFINHSCSPNLYFRTVRVNSLVPSAALFAGRDIEAGEELSFDYGDAMG 229
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BLAST of mRNA_S-ischiensis_contig83.19970.1 vs. uniprot
Match: J3L4J0_ORYBR (Uncharacterized protein n=2 Tax=Oryza brachyantha TaxID=4533 RepID=J3L4J0_ORYBR)

HSP 1 Score: 95.5 bits (236), Expect = 5.620e-19
Identity = 70/197 (35.53%), Postives = 87/197 (44.16%), Query Frame = 3 
Query:  540 ECHSGCGCGPGCPLRATQPLEAAPFPGGGRAGKHRDWCSRTAPSFRAVPGRGGATGSPVPPRLLVKHTGAKGWGVIALDGVAAGAFVAEYTGEVLPVEVAREHAAKYDDQGGANYL----ITVLERFPATGQVWRTAVDATRLGSAARFFNHSCDPCLDMHVV---RRGSLLPHLVLVARRAIPAGSELTFDYGGSQ 1109
            EC  GC CGP C  R TQ                                RG      +  RL V     KGWG+ A + +  G FV EY GE+L  E AR+    YD+      L    I + E  P+     R  +DAT++G+AARF NHSCD   ++H V     GSLLP L   A R I  G ELTF YG ++
Sbjct:    8 ECGEGCPCGPSCGNRRTQ--------------------------------RG------ITVRLRVMRHRKKGWGLHAAEVLRHGRFVCEYAGELLTTEEARKRQRLYDELASVGKLSPALIVIREHLPSGKACLRVNIDATKVGNAARFINHSCDGG-NLHPVLVRSSGSLLPRLCFFAARDINEGEELTFSYGDAR 165
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BLAST of mRNA_S-ischiensis_contig83.19970.1 vs. uniprot
Match: A0A4Y7M087_9CRUS (EOG090X0AQH n=1 Tax=Ceriodaphnia reticulata TaxID=302197 RepID=A0A4Y7M087_9CRUS)

HSP 1 Score: 98.2 bits (243), Expect = 1.220e-17
Identity = 54/126 (42.86%), Postives = 69/126 (54.76%), Query Frame = 3 
Query:  726 LLVKHTGAKGWGVIALDGVAAGAFVAEYTGEVLPVEVAREHAAKYDDQGGANYLITVLERFPATGQVWRTAVDATRLGSAARFFNHSCDPCLDMHVVRRGSLLPHLVLVARRAIPAGSELTFDYGG 1103
            L +   G KG G+     +A G FV EY GEV+  E AR       + G  NY+  + E F        T +D T +G+  R+ NHSCDP L +  VR  + +P L L ARR IPAG+ELTFDYGG
Sbjct:  545 LQLMDAGPKGTGLRCDVQLARGTFVCEYAGEVIGAEEARRRYGAQKESGRPNYIFALREHFGTDDASVLTYIDPTYIGNVGRYINHSCDPNLLIVPVRTDTAVPKLCLFARRNIPAGAELTFDYGG 670
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BLAST of mRNA_S-ischiensis_contig83.19970.1 vs. uniprot
Match: A0A507FFW6_9FUNG (Histone-lysine N-methyltransferase n=1 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507FFW6_9FUNG)

HSP 1 Score: 94.0 bits (232), Expect = 1.390e-17
Identity = 81/273 (29.67%), Postives = 116/273 (42.49%), Query Frame = 3 
Query:  351 AVRNAYPFGLVREEDADTLQGCT--CSGSCPA-LLGPE---DGSDPS----DRMVCACALLNIAAGS------------EHVARFECHSGCGCGPGCPLRATQPLEAAPFPGGGRAGKHRDWCSRTAPSFRAVPGRGGATGSPVPPRLLVKHT-GAKGWGVIALDGVAAGAFVAEYTGEVLPVEVAREHAAKYDDQGGANYLITVLERFPATGQVWRTAVDATRLGSAARFFNHSCDPCLDMHVVRRGSLLPHLVLVARRAIPAGSELTFDYG 1100
            A R    F    E+    ++G T  CS      ++G E   DG D +    D +VC C  ++ AA              +H+  FEC+S C C   C  R                G+   W                          + KH   +KG+ + +LD +  GAFV EY GE++  + A             NY+I + E    T +++RT +D + +G+AARF NHSC+P L    VR  S++P   L A + IPAG ELTFDYG
Sbjct:    8 AERVRISFSGTAEDAHAAVEGFTYVCSSIADGQIVGSECAYDGCDHTGLSCDDVVCGCVGVHGAAYKRDGTGMLDPSVDDHMPIFECNSNCSCEASCWNRVV--------------GRGLRWKV-----------------------FVAKHAIRSKGFMLASLDFIPKGAFVLEYAGEIIRADEAERRWEYQRKLKLPNYIICIREH--TTSRIFRTNIDPSVVGNAARFINHSCEPNLAFRTVRINSMIPSAALFATQDIPAGQELTFDYG 241
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BLAST of mRNA_S-ischiensis_contig83.19970.1 vs. uniprot
Match: A0A4Y7L069_PAPSO (Uncharacterized protein n=2 Tax=Papaver somniferum TaxID=3469 RepID=A0A4Y7L069_PAPSO)

HSP 1 Score: 89.7 bits (221), Expect = 1.070e-15
Identity = 75/248 (30.24%), Postives = 98/248 (39.52%), Query Frame = 3 
Query:  396 ADTLQGCTCSGSCPALLGPEDGSDPSDRMVCACALL------NIAAGSEHVARF-ECHSGCGCGPGCPLRATQPLEAAPFPGGGRAGKHRDWCSRTAPSFRAVPGRGGATGSPVPPRLLVKHTGAKGWGVIALDGVAAGAFVAEYTGEVLPVEVAREHAAKYDDQGGANY----LITVLERFPATGQVWRTAVDATRLGSAARFFNHSCDPCLDMHVVRRGS--LLPHLVLVARRAIPAGSELTFDYG 1100
            +D+  GC C              D +  + C C+ L      N+ + S  +    EC   C CG  C  R TQ                                RG      V  ++ +     KGW + +   V  G FV EY GE+L  + AR+   KYDD    +     L+ V E  P+     R  +DATR+G+AARF NHSCD      V+ RGS  L P L   A R I  G EL F YG
Sbjct:  126 SDSTSGCVCKNC---------SEDTNGDIRCPCSKLKPLSLSNMGSDSSELGLMTECGPSCDCGVECKNRLTQ--------------------------------RG------VSVQVRIGKDARKGWSLYSAQFVPRGEFVCEYAGELLTTQEARKRQKKYDDIASTSQFGSALLVVREHLPSGNACLRVNIDATRVGNAARFINHSCDGGNLSTVLVRGSGALFPRLCFFASRDILDGEELAFSYG 326
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BLAST of mRNA_S-ischiensis_contig83.19970.1 vs. uniprot
Match: A0A4Y7NLQ4_9CRUS (EOG090X0AQH n=1 Tax=Moina brachiata TaxID=675436 RepID=A0A4Y7NLQ4_9CRUS)

HSP 1 Score: 91.7 bits (226), Expect = 1.600e-15
Identity = 75/242 (30.99%), Postives = 105/242 (43.39%), Query Frame = 3 
Query:  399 DTLQGCTCSGSCPALLGPEDGSDPSDRMVCACALLNIAAGSEHVAR-----FECHSGCGCGPG-CPLRATQPLEAAPFPGGGRAGKHRDWCSRTAPSFRAVPGRGGATGSPVPPRLLVKHTGAKGWGVIALDGVAAGAFVAEYTGEVL-PVEVAREHAAKYDDQGGANYLITVLERFPATGQVWRTAVDATRLGSAARFFNHSCDPCLDMHVVRRGSLLPHLVLVARRAIPAGSELTFDYGG 1103
            +  +GC CS  C A         P  R   +      A+G     +     +ECHS C C P  CP R  Q             G H +                          L +  T AKG G+     +A G FV EY GEV+ P+E    ++++   Q   NY+  + E F     V  T +D T +G+  R+ NHSCD  L +  VR G+++P L L A+R IPAG+EL+F+YGG
Sbjct:  546 EQFEGCACSLPCSATC-------PCMRRFNSIQFYYFASGLRDTDQPPAMIYECHSNCACNPETCPNRLVQK------------GPHAN--------------------------LELVDTLAKGTGLKCNSNLARGDFVCEYAGEVIGPLEAKMRYSSRQQRQL-PNYIFALKEHFGDDPVV--TYIDPTFIGNLGRYINHSCDANLLVLPVRTGTVVPRLCLFAKRDIPAGTELSFNYGG 739
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BLAST of mRNA_S-ischiensis_contig83.19970.1 vs. uniprot
Match: A0A835YK44_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK44_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 1.150e-14
Identity = 49/129 (37.98%), Postives = 67/129 (51.94%), Query Frame = 3 
Query:  711 PVPPRLLVKHTGAKGWGVIALDGVAAGAFVAEYTGEVLPVEVAREHAAKYDDQGGANYLITVLERFPATGQVWRTAVDATRLGSAARFFNHSCDPCLDMHVVRRGSLLPHLVLVARRAIPAGSELTFDY 1097
            PV  RL+V+ +   GWG+  L   A    + EY GE +   VA +   KY++ G  +  +  L+          T +DATR G  ARF NH C P  D  VV    + P LV+VARRA+  G E+T+DY
Sbjct:   12 PVEQRLVVRRSHIHGWGLFTLMPFAPNDMIVEYMGEKIRRCVADQREKKYEEMGLGSCYLFALDA--------STIIDATRAGGPARFINHCCGPNADAKVVAVDGV-PKLVIVARRALAVGEEVTYDY 131
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BLAST of mRNA_S-ischiensis_contig83.19970.1 vs. uniprot
Match: A0A6G0UR50_9BILA (Uncharacterized protein n=1 Tax=Halicephalobus sp. NKZ332 TaxID=2598192 RepID=A0A6G0UR50_9BILA)

HSP 1 Score: 88.2 bits (217), Expect = 1.600e-14
Identity = 49/118 (41.53%), Postives = 72/118 (61.02%), Query Frame = 3 
Query:  747 AKGWGVIALDGVAAGAFVAEYTGEVLPVEVAREHAAKYDDQGGANYLITVLERFPATGQVWRTAVDATRLGSAARFFNHSCDPCLDMHVVRRGSLLPHLVLVARRAIPAGSELTFDYG 1100
            AK + V+A++ +  G FVAEYTGEVL  E A+E  +  +     NYL+ + E F  +  +  T +DA   G+ +RF NH CDP L++ +VR GS++P   L A+R I    EL++DYG
Sbjct:  395 AKRFQVVAVEKILKGTFVAEYTGEVLSPEEAKERLSDSEKLKN-NYLLCIGEVFNNSTMI--TCIDARYYGNISRFINHGCDPNLEIKLVRTGSMIPRFCLFAKRDIFPSEELSYDYG 509
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig83.19970.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LC94_ECTSI1.200e-3834.92SET domain and mariner transposase fusion n=1 Tax=... [more]
A0A7L2TEZ0_POMRU4.760e-2541.80SETMR methyltransferase (Fragment) n=1 Tax=Pomatos... [more]
A0A1Y2BZA1_9FUNG2.510e-2131.52SET domain-containing protein n=1 Tax=Rhizoclosmat... [more]
J3L4J0_ORYBR5.620e-1935.53Uncharacterized protein n=2 Tax=Oryza brachyantha ... [more]
A0A4Y7M087_9CRUS1.220e-1742.86EOG090X0AQH n=1 Tax=Ceriodaphnia reticulata TaxID=... [more]
A0A507FFW6_9FUNG1.390e-1729.67Histone-lysine N-methyltransferase n=1 Tax=Chytrio... [more]
A0A4Y7L069_PAPSO1.070e-1530.24Uncharacterized protein n=2 Tax=Papaver somniferum... [more]
A0A4Y7NLQ4_9CRUS1.600e-1530.99EOG090X0AQH n=1 Tax=Moina brachiata TaxID=675436 R... [more]
A0A835YK44_9STRA1.150e-1437.98Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6G0UR50_9BILA1.600e-1441.53Uncharacterized protein n=1 Tax=Halicephalobus sp.... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig83contigS-ischiensis_contig83:196151..199863 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score168.3
Seed ortholog evalue9.6e-39
Seed eggNOG ortholog2880.D8LC94
KEGG rclassRC00003,RC00060,RC00181,RC00496
KEGG koko:K11419,ko:K11433
KEGG ReactionR03875,R03938,R04866,R04867
KEGG Pathwayko00310,map00310
GOsGO:0000228,GO:0000785,GO:0000790,GO:0000792,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005720,GO:0031974,GO:0031981,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0070013
EggNOG free text desc.SET domain
EggNOG OGsCOG2940@1,KOG1082@2759
EC2.1.1.43
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03036
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionSET domain protein
Ec32 orthologEc-14_005625.1
Exons5
Model size1884
Cds size1593
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817327.7554612-UTR-S-ischiensis_contig83:196150..1962511622817327.7554612-UTR-S-ischiensis_contig83:196150..196251Schizocladia ischiensis KU_0333UTRS-ischiensis_contig83 196151..196251 +
1695741029.8171935-UTR-S-ischiensis_contig83:196150..1962511695741029.8171935-UTR-S-ischiensis_contig83:196150..196251Schizocladia ischiensis KU_0333UTRS-ischiensis_contig83 196151..196251 +
1622817327.8346062-UTR-S-ischiensis_contig83:199673..1998631622817327.8346062-UTR-S-ischiensis_contig83:199673..199863Schizocladia ischiensis KU_0333UTRS-ischiensis_contig83 199674..199863 +
1695741029.8994906-UTR-S-ischiensis_contig83:199673..1998631695741029.8994906-UTR-S-ischiensis_contig83:199673..199863Schizocladia ischiensis KU_0333UTRS-ischiensis_contig83 199674..199863 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817327.7673597-CDS-S-ischiensis_contig83:196251..1966701622817327.7673597-CDS-S-ischiensis_contig83:196251..196670Schizocladia ischiensis KU_0333CDSS-ischiensis_contig83 196252..196670 +
1695741029.8374012-CDS-S-ischiensis_contig83:196251..1966701695741029.8374012-CDS-S-ischiensis_contig83:196251..196670Schizocladia ischiensis KU_0333CDSS-ischiensis_contig83 196252..196670 +
1622817327.7794487-CDS-S-ischiensis_contig83:197074..1973721622817327.7794487-CDS-S-ischiensis_contig83:197074..197372Schizocladia ischiensis KU_0333CDSS-ischiensis_contig83 197075..197372 +
1695741029.84892-CDS-S-ischiensis_contig83:197074..1973721695741029.84892-CDS-S-ischiensis_contig83:197074..197372Schizocladia ischiensis KU_0333CDSS-ischiensis_contig83 197075..197372 +
1622817327.7937746-CDS-S-ischiensis_contig83:198219..1983151622817327.7937746-CDS-S-ischiensis_contig83:198219..198315Schizocladia ischiensis KU_0333CDSS-ischiensis_contig83 198220..198315 +
1695741029.8608918-CDS-S-ischiensis_contig83:198219..1983151695741029.8608918-CDS-S-ischiensis_contig83:198219..198315Schizocladia ischiensis KU_0333CDSS-ischiensis_contig83 198220..198315 +
1622817327.8102026-CDS-S-ischiensis_contig83:198705..1988041622817327.8102026-CDS-S-ischiensis_contig83:198705..198804Schizocladia ischiensis KU_0333CDSS-ischiensis_contig83 198706..198804 +
1695741029.8741724-CDS-S-ischiensis_contig83:198705..1988041695741029.8741724-CDS-S-ischiensis_contig83:198705..198804Schizocladia ischiensis KU_0333CDSS-ischiensis_contig83 198706..198804 +
1622817327.8227797-CDS-S-ischiensis_contig83:198992..1996731622817327.8227797-CDS-S-ischiensis_contig83:198992..199673Schizocladia ischiensis KU_0333CDSS-ischiensis_contig83 198993..199673 +
1695741029.8869426-CDS-S-ischiensis_contig83:198992..1996731695741029.8869426-CDS-S-ischiensis_contig83:198992..199673Schizocladia ischiensis KU_0333CDSS-ischiensis_contig83 198993..199673 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig83.19970.1prot_S-ischiensis_contig83.19970.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig83 196252..199673 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig83.19970.1

>prot_S-ischiensis_contig83.19970.1 ID=prot_S-ischiensis_contig83.19970.1|Name=mRNA_S-ischiensis_contig83.19970.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=531bp
MSWHKVSSSRLVHLLPWQDLVSLASASRSFRNDVREALRDARVDLSGGLD
PQPVACAGRDACDPSSEAAQGGLGGPLPAPFSYAVRNAYPFGLVREEDAD
TLQGCTCSGSCPALLGPEDGSDPSDRMVCACALLNIAAGSEHVARFECHS
GCGCGPGCPLRATQPLEAAPFPGGGRAGKHRDWCSRTAPSFRAVPGRGGA
TGSPVPPRLLVKHTGAKGWGVIALDGVAAGAFVAEYTGEVLPVEVAREHA
AKYDDQGGANYLITVLERFPATGQVWRTAVDATRLGSAARFFNHSCDPCL
DMHVVRRGSLLPHLVLVARRAIPAGSELTFDYGGSQGGAAGGGPAAGTGA
RAETQPATPPGTAAFEACGTGVPQQVQRQSPPWLSGSGPEGTSPSTMAMT
ATTMVRRSGWAAEGPPPPAERCREVGPSVSAPTPLGGAAADPGPDALARW
AQGAVSQAGAVGEPGSGPSGPRPPAMGPGCDRAQGRGQGRRGPGQRPPGR
AKCRCGAAACRGVLPFDPQAFDCGLDGGLG*
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mRNA from alignment at S-ischiensis_contig83:196151..199863+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig83.19970.1 ID=mRNA_S-ischiensis_contig83.19970.1|Name=mRNA_S-ischiensis_contig83.19970.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=3713bp|location=Sequence derived from alignment at S-ischiensis_contig83:196151..199863+ (Schizocladia ischiensis KU_0333)
CACGTTGGGGCCTGCGACGATCGATGGCGCTCGTTGCGTCTGCCTGACAT
GCCGGGCATCCCTCGCACTGTTGAGGGAGGAACGCCCCCTGCAGAAGCGC
GATGTCCTGGCACAAGGTGTCTAGTTCTCGCCTCGTCCATCTGTTGCCCT
GGCAAGACCTTGTGAGTCTCGCCAGCGCCTCGCGAAGCTTCCGAAACGAC
GTACGGGAGGCCTTGCGTGACGCTCGCGTGGACCTCTCGGGTGGGCTGGA
CCCGCAACCAGTGGCGTGTGCTGGGAGGGATGCATGCGACCCTTCATCGG
AGGCTGCACAGGGTGGCCTGGGCGGGCCTTTGCCTGCGCCATTTTCGTAT
GCCGTGAGGAATGCTTACCCGTTTGGCCTTGTGCGAGAAGAAGATGCTGA
CACCCTGCAGGGTTGCACCTGCTCTGGGTCCTGCCCGGCCTTGCTGGGCC
CGGAAGATGGCTCAGATCCCAGCGATCGCATGGTGTGCGCATGCGCTTTG
CTGAATATTGCTGCGGGGAGGTAAGCAGGTGCGTCACTTGCTGTGGCAAG
TTGACACCTCCGTGTTTTGCTGACGCCCCTCCCTTGCCACACCCTCTCTT
CAAGACTGCACTTGAAACCCTCGCTCTGGAGCCTGGGGGAGCTTCCCTCT
CACGTTGACATCCTCTCACACTGCACAGAACACTGCTTTTTTGGCGCGAG
TTTCACCTCCCGGTCCACAATGCCGAAGTTTGCATACATCCTGCATGACA
TGCCTCATCATGATGCCCTCCCGCGGCTGCTCGCCAGGCACCTGGCAATA
TCCTAAGAGCACACATTAACCCCTCCGGCCCCTCCAGTTGCCCTGCAAGC
ATCGACACTGCGCCCTCCTCTCTTGCTTCCTGCCCACGACCCACGCCTGC
GCGGCGGTTGCCCCCTCGCCGCAGCGAGCACGTCGCACGCTTTGAGTGCC
ACAGCGGCTGCGGTTGCGGGCCCGGGTGCCCTTTGCGGGCCACTCAGCCC
CTGGAGGCGGCACCTTTCCCTGGAGGTGGGCGAGCGGGCAAGCATAGAGA
CTGGTGCAGCAGGACAGCTCCTAGCTTCCGGGCTGTCCCCGGGAGGGGCG
GTGCCACGGGGAGCCCCGTGCCGCCACGGCTGCTGGTGAAGCACACTGGG
GCCAAGGGGTGGGGTGTCATCGCCCTGGACGGCGTTGCCGCGGGTGCATT
TGTCGCCGAGTACACGGGGGAGGTGAGGGGAAGCGAAGCGGTTTGCCGAG
ACGGACTGTTGCCAGCTCATGTCCTGGAACGCCGCGTGCTACTACTGCAG
TAGGTACTGCAGTACTACTAGTAGCATGTAGATGAGAAGTCTTGTGTTCG
GTGTCATGTTTGATGTCGTCAGTGAATCGCTGAATTGTGTGGGATGGTGT
ACCTCGCCAGCTCTGCAGTGAATACGTGTCCAATGAGAGGTCCCAGATGG
GGGCTGGGGGGGGAGAGCTAGGGTCACTCACGGAGGAGGCTGATGCCAGG
AGAGGGAAAGAGGCAAGAGGTGTCAAGGCTTGGGGGACTGTTCGGCGCTG
CTTCCCTTATTCTTCGAAGTAAGTAAGCTTCCGGTGATTCCAATAGTGCT
ACTCGAGTACGAGTACAGTACTCGTACATGCTGTGGACCCTAAGCTTAGT
ACTCTATGCGGTAGTATTTACAAAAACTTTGAAATGCTTGGAGTAGTGCA
ATGCTAAGCCCTGCAGTTGGAGAACGTATCATTTCAAACTGCCGCACTTC
GAAATATGTACATGGTACGTGGTAGTACACCTGTTGGTAAAGAGTGTTGT
CGTTCGCGCGGAGAACGCTACGTGGTTATGCACGACTTAACCAGTCAACC
TCGCTAGATGTGGTGGTCTAATCGCTGACGCCTTGACCTGTTAGCCTTTG
AACAACGTTGGAGCGTCGCGCTTTCTGTCCCTCTTGCCCAGGGGACCCTG
CGCCTGACCCTGCCCCTACATGGCCCGAACCTCTTGACCGCCGCTGCCAT
TCCGGGGCTTTTCGATCGCACCCCGGCGAGGGCAACTAACTTTTCTATGC
GGAATATCCGGAATTGAAGGTGCTGCCTGTGGAGGTTGCCCGGGAGCATG
CGGCCAAGTACGACGACCAGGGGGGCGCCAACTACCTCATCACGGTGCTC
GAGCGCTTCCCTGCAGTGAGTGTGCCCACGACCAGAGCGGGAAATTTAGC
TGTTGGAGGAGCCCTTCACCCCCCCCCCTGTTGCTTTAATGGGGACATGG
TATACAGCACTTCCATGTACTTTTACGGTACTGTACATGCAGCGATGCCC
TTGGTGGATGCACCCACCCCTCCCAGTCCCGGTCCCATCCCCCCACACCT
TGGCCTCGGCGGCCTCTCTGCCTCCGCGTTGACCATTGTGCCAGGGCCCG
CCAGCCACCATCCCCGGCGCTGCGACGCACCCTTTCCATGTGAACTTGCA
TTCAACCGGCAGCCCCCCCCCCCCGCCCCGCCCCCCCCCCCTCTGTGCTC
GGCCGAATCACCTCCCGGGCGGCACAATGCGCCTCCCTACCCCCCCGGGA
CACAGACGGGCCAGGTGTGGCGGACAGCAGTGGACGCCACCAGGCTGGGA
AGCGCCGCGCGATTTTTTAACCACTCCTGCGACCCCTGCCTGGACATGCA
CGTGGTAAGCACGTCAGCCCCCCTTTCTCTCCCCAGAGCAGTCCACACCA
AGCGCCCAGCCTGGGCTTGCTCATCGTGTTGCCGTTCAAAGGGTCTCCAC
TCCCACCAGGCATTGGTCCCCCCACCCCAAAAGCCCGCCCGCCCGCCCCC
GGTACGCCGCATGGTGCAAACATTCAACTCTCTGCTTCACAGGTGAGGAG
GGGCTCACTCCTCCCCCATCTCGTCCTCGTCGCTCGGCGGGCCATCCCCG
CCGGCTCAGAACTCACCTTTGACTACGGTGGGAGCCAGGGTGGAGCGGCT
GGAGGGGGGCCTGCGGCGGGCACGGGGGCAAGGGCGGAGACCCAGCCCGC
AACCCCCCCGGGGACCGCCGCCTTTGAAGCTTGCGGGACGGGTGTCCCGC
AGCAAGTGCAGCGGCAGTCACCACCTTGGCTGAGCGGCTCAGGGCCCGAA
GGCACGAGTCCAAGTACCATGGCGATGACAGCGACAACGATGGTGAGGAG
AAGCGGGTGGGCTGCGGAGGGTCCCCCGCCCCCGGCGGAACGTTGCAGGG
AAGTGGGGCCTAGTGTCTCAGCTCCCACGCCCCTGGGCGGGGCGGCCGCG
GACCCCGGGCCCGATGCTCTTGCCCGGTGGGCCCAGGGGGCCGTAAGTCA
GGCGGGGGCCGTCGGTGAGCCTGGGTCAGGTCCCTCTGGCCCCCGGCCAC
CGGCAATGGGCCCGGGGTGTGACCGGGCGCAGGGCAGAGGCCAAGGAAGA
CGCGGCCCGGGACAGAGGCCTCCCGGTCGGGCCAAGTGCAGGTGTGGAGC
TGCGGCGTGCAGAGGTGTGCTGCCGTTCGACCCCCAGGCCTTCGATTGTG
GGCTTGATGGTGGGTTAGGGTGAAGTTGGGGTTTAGGTTACGGTTTAACA
CCGCTGCAGGCGCGCGATTGTACCCCTACGCGGTCGACGCCGCGGCCGAG
CGCGGCCGACGAGGGGTCAGATTTCTATAATCACGCCGCAACGGCACTCA
AAATGCTTAGCCGGACATGCACCCAGGTGGAAATATGGAGCCCGAATCTG
TGCTCCGTACAAC
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Coding sequence (CDS) from alignment at S-ischiensis_contig83:196151..199863+

>mRNA_S-ischiensis_contig83.19970.1 ID=mRNA_S-ischiensis_contig83.19970.1|Name=mRNA_S-ischiensis_contig83.19970.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=3186bp|location=Sequence derived from alignment at S-ischiensis_contig83:196151..199863+ (Schizocladia ischiensis KU_0333)
ATGTCCTGGCACAAGGTGTCTAGTTCTCGCCTCGTCCATCTGTTGCCCTG
GCAAGACCTTGTGAGTCTCGCCAGCGCCTCGCGAAGCTTCCGAAACGACG
TACGGGAGGCCTTGCGTGACGCTCGCGTGGACCTCTCGGGTGGGCTGGAC
CCGCAACCAGTGGCGTGTGCTGGGAGGGATGCATGCGACCCTTCATCGGA
GGCTGCACAGGGTGGCCTGGGCGGGCCTTTGCCTGCGCCATTTTCGTATG
CCGTGAGGAATGCTTACCCGTTTGGCCTTGTGCGAGAAGAAGATGCTGAC
ACCCTGCAGGGTTGCACCTGCTCTGGGTCCTGCCCGGCCTTGCTGGGCCC
GGAAGATGGCTCAGATCCCAGCGATCGCATGGTGTGCGCATGCGCTTTGC
TGAATATTGCTGCGGGGAGATGTCCTGGCACAAGGTGTCTAGTTCTCGCC
TCGTCCATCTGTTGCCCTGGCAAGACCTTGTGAGTCTCGCCAGCGCCTCG
CGAAGCTTCCGAAACGACGTACGGGAGGCCTTGCGTGACGCTCGCGTGGA
CCTCTCGGGTGGGCTGGACCCGCAACCAGTGGCGTGTGCTGGGAGGGATG
CATGCGACCCTTCATCGGAGGCTGCACAGGGTGGCCTGGGCGGGCCTTTG
CCTGCGCCATTTTCGTATGCCGTGAGGAATGCTTACCCGTTTGGCCTTGT
GCGAGAAGAAGATGCTGACACCCTGCAGGGTTGCACCTGCTCTGGGTCCT
GCCCGGCCTTGCTGGGCCCGGAAGATGGCTCAGATCCCAGCGATCGCATG
GTGTGCGCATGCGCTTTGCTGAATATTGCTGCGGGGAGCGAGCACGTCGC
ACGCTTTGAGTGCCACAGCGGCTGCGGTTGCGGGCCCGGGTGCCCTTTGC
GGGCCACTCAGCCCCTGGAGGCGGCACCTTTCCCTGGAGGTGGGCGAGCG
GGCAAGCATAGAGACTGGTGCAGCAGGACAGCTCCTAGCTTCCGGGCTGT
CCCCGGGAGGGGCGGTGCCACGGGGAGCCCCGTGCCGCCACGGCTGCTGG
TGAAGCACACTGGGGCCAAGGGGTGGGGTGTCATCGCCCTGGACGGCGTT
GCCGCGGGTGCATTTGTCGCCGAGTACACGGGGGAGCGAGCACGTCGCAC
GCTTTGAGTGCCACAGCGGCTGCGGTTGCGGGCCCGGGTGCCCTTTGCGG
GCCACTCAGCCCCTGGAGGCGGCACCTTTCCCTGGAGGTGGGCGAGCGGG
CAAGCATAGAGACTGGTGCAGCAGGACAGCTCCTAGCTTCCGGGCTGTCC
CCGGGAGGGGCGGTGCCACGGGGAGCCCCGTGCCGCCACGGCTGCTGGTG
AAGCACACTGGGGCCAAGGGGTGGGGTGTCATCGCCCTGGACGGCGTTGC
CGCGGGTGCATTTGTCGCCGAGTACACGGGGGAGGTGCTGCCTGTGGAGG
TTGCCCGGGAGCATGCGGCCAAGTACGACGACCAGGGGGGCGCCAACTAC
CTCATCACGGTGCTCGAGCGCTTCCCTGCAGTGCTGCCTGTGGAGGTTGC
CCGGGAGCATGCGGCCAAGTACGACGACCAGGGGGGCGCCAACTACCTCA
TCACGGTGCTCGAGCGCTTCCCTGCAACGGGCCAGGTGTGGCGGACAGCA
GTGGACGCCACCAGGCTGGGAAGCGCCGCGCGATTTTTTAACCACTCCTG
CGACCCCTGCCTGGACATGCACGTGACGGGCCAGGTGTGGCGGACAGCAG
TGGACGCCACCAGGCTGGGAAGCGCCGCGCGATTTTTTAACCACTCCTGC
GACCCCTGCCTGGACATGCACGTGGTGAGGAGGGGCTCACTCCTCCCCCA
TCTCGTCCTCGTCGCTCGGCGGGCCATCCCCGCCGGCTCAGAACTCACCT
TTGACTACGGTGGGAGCCAGGGTGGAGCGGCTGGAGGGGGGCCTGCGGCG
GGCACGGGGGCAAGGGCGGAGACCCAGCCCGCAACCCCCCCGGGGACCGC
CGCCTTTGAAGCTTGCGGGACGGGTGTCCCGCAGCAAGTGCAGCGGCAGT
CACCACCTTGGCTGAGCGGCTCAGGGCCCGAAGGCACGAGTCCAAGTACC
ATGGCGATGACAGCGACAACGATGGTGAGGAGAAGCGGGTGGGCTGCGGA
GGGTCCCCCGCCCCCGGCGGAACGTTGCAGGGAAGTGGGGCCTAGTGTCT
CAGCTCCCACGCCCCTGGGCGGGGCGGCCGCGGACCCCGGGCCCGATGCT
CTTGCCCGGTGGGCCCAGGGGGCCGTAAGTCAGGCGGGGGCCGTCGGTGA
GCCTGGGTCAGGTCCCTCTGGCCCCCGGCCACCGGCAATGGGCCCGGGGT
GTGACCGGGCGCAGGGCAGAGGCCAAGGAAGACGCGGCCCGGGACAGAGG
CCTCCCGGTCGGGCCAAGTGCAGGTGTGGAGCTGCGGCGTGCAGAGGTGT
GCTGCCGTTCGACCCCCAGGCCTTCGATTGTGGGCTTGATGGTGGGTTAG
GGTGAGTGAGGAGGGGCTCACTCCTCCCCCATCTCGTCCTCGTCGCTCGG
CGGGCCATCCCCGCCGGCTCAGAACTCACCTTTGACTACGGTGGGAGCCA
GGGTGGAGCGGCTGGAGGGGGGCCTGCGGCGGGCACGGGGGCAAGGGCGG
AGACCCAGCCCGCAACCCCCCCGGGGACCGCCGCCTTTGAAGCTTGCGGG
ACGGGTGTCCCGCAGCAAGTGCAGCGGCAGTCACCACCTTGGCTGAGCGG
CTCAGGGCCCGAAGGCACGAGTCCAAGTACCATGGCGATGACAGCGACAA
CGATGGTGAGGAGAAGCGGGTGGGCTGCGGAGGGTCCCCCGCCCCCGGCG
GAACGTTGCAGGGAAGTGGGGCCTAGTGTCTCAGCTCCCACGCCCCTGGG
CGGGGCGGCCGCGGACCCCGGGCCCGATGCTCTTGCCCGGTGGGCCCAGG
GGGCCGTAAGTCAGGCGGGGGCCGTCGGTGAGCCTGGGTCAGGTCCCTCT
GGCCCCCGGCCACCGGCAATGGGCCCGGGGTGTGACCGGGCGCAGGGCAG
AGGCCAAGGAAGACGCGGCCCGGGACAGAGGCCTCCCGGTCGGGCCAAGT
GCAGGTGTGGAGCTGCGGCGTGCAGAGGTGTGCTGCCGTTCGACCCCCAG
GCCTTCGATTGTGGGCTTGATGGTGGGTTAGGGTGA
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