mRNA_S-ischiensis_contig83.19950.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig83.19950.1 vs. uniprot
Match: A0A835YPK2_9STRA (Squalene/phytoene synthase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPK2_9STRA) HSP 1 Score: 189 bits (480), Expect = 6.140e-55 Identity = 102/207 (49.28%), Postives = 137/207 (66.18%), Query Frame = 1
Query: 1 AAIKDAVRGHVVPGQMRMQFWRDSVDEVFRENACAGPPAEGAVGDDLGRGRGGAAPPQPVVQALADAVARHGLTKRWFDRLLDARSADLETQQASTVRDLETYAENTASSLLYLMLEVAGVRGDPRADHAASHVGKALGVCTLLRGIAHHAARRSSVIPSEVMRKNALYSSALFEGPRSPEEAHALAECVYEVASAAKAHMDAAQEL 621
A+IK+AVR + G MRMQ+W D V+ V+ G G D PP+PV AL AV +HGLT+RW +R++ AR +LE +++ DLETYAE+TASSLLYL LE AGV D RA+HAA H+GKA+G+CTLLR + HH+A++ SV+P +++RK+ + S+ LF G R+ EA ALA C Y+VA AK HM+ QEL
Sbjct: 77 ASIKEAVRNNTRSGTMRMQWWMDVVNAVY----------SGGNGGDAR-----VLPPEPVCVALNQAVQQHGLTRRWLERMIAARRHELEAPGWTSIADLETYAEHTASSLLYLSLEAAGV-ADERAEHAAGHIGKAVGICTLLRAVQHHSAQKLSVLPGQLLRKHLVASTVLFNGARTEAEAEALAACFYDVACVAKGHMEQGQEL 267
BLAST of mRNA_S-ischiensis_contig83.19950.1 vs. uniprot
Match: D7FSI4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSI4_ECTSI) HSP 1 Score: 189 bits (479), Expect = 8.200e-55 Identity = 112/224 (50.00%), Postives = 142/224 (63.39%), Query Frame = 1
Query: 1 AAIKDAVRGHVVPGQMRMQFWRDSVDEVFRENACAGPPAEGAVGDDLGRGRGGAAPPQPVVQALADAVARH--GLTKRWFDRLLDARSADLETQQASTVRDLETYAENTASSLLYLMLEVAGVR-----GDPRADHAASHVGKALGVCTLLRGIA-----------HHAARRSSVIPSEVMRKNALYSSALFEGPRSPEEAHALAECVYEVASAAKAHMDAAQE 618
AAIKD+VRG+V+PG+MRMQ+W+D++ +VF VG+ PP PV ALA+ VA GLT+RWFDR+LDAR ADL+ Q T+ ++ETYAENTASSLLYL LE+AGVR G HAA HVGKA G+CTLLR +A S V+PS+VMR+ L + L GP+ +EAHALAECV+ VAS AK H++AA+E
Sbjct: 55 AAIKDSVRGNVMPGKMRMQWWKDTMADVF-------------VGEP---------PPLPVALALAEVVANQKGGLTRRWFDRVLDARMADLDRTQPETLEEMETYAENTASSLLYLSLELAGVRAGAGPGAAALGHAAGHVGKAAGICTLLRSLALPPPPAALSSGSIGFAESCVLPSDVMRRFLLRHAVLERGPQDDKEAHALAECVFAVASVAKGHIEAAEE 256
BLAST of mRNA_S-ischiensis_contig83.19950.1 vs. uniprot
Match: A0A4D9CW87_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CW87_9STRA) HSP 1 Score: 172 bits (435), Expect = 2.460e-48 Identity = 93/208 (44.71%), Postives = 127/208 (61.06%), Query Frame = 1
Query: 1 AAIKDAVRGHVVPGQMRMQFWRDSVDEVFRENACAGPPAEGAVGDDLGRGRGGAAPPQPVVQALADAVARHGLTKRWFDRLLDARSADLETQQASTVRDLETYAENTASSLLYLMLEVAGVRGDPRADHAASHVGKALGVCTLLRGIAHHAARRSSVIPSEVMRKNALYSSALFEGPRSPEEAHALAECVYEVASAAKAHMDAAQELI 624
A IKD RG+ +PGQMRMQ+WR+ + +++ G +P PV +AL +AV H LT+RW DRLL+AR DL Q + + +LE YAENTASSLLYL LE VR P ADHAASHVG+A G+ T+LR HAA +S +P E+ R+ + + + GP SPE A AL++ +EVA+ A HM+ A+E++
Sbjct: 66 ALIKDVARGNTLPGQMRMQWWREVISAIYQ----------------------GKSPAHPVARALCEAVQAHNLTRRWLDRLLEAREGDLGNIQPTRMEELEDYAENTASSLLYLTLEALHVR-HPTADHAASHVGRATGIATVLRATKFHAAHQSLYVPLEIQREFKVNVNDILRGPESPEAAQALSDMFFEVATQAHLHMEHAREML 250
BLAST of mRNA_S-ischiensis_contig83.19950.1 vs. uniprot
Match: A0A261Y032_9FUNG (Uncharacterized protein n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261Y032_9FUNG) HSP 1 Score: 147 bits (372), Expect = 3.060e-39 Identity = 85/208 (40.87%), Postives = 122/208 (58.65%), Query Frame = 1
Query: 1 AAIKDAVRGHVVPGQMRMQFWRDSVDEVFRENACAGPPAEGAVGDDLGRGRGGAAPPQPVVQALADAVARHGLTKRWFDRLLDARSADLETQQASTVRDLETYAENTASSLLYLMLEVAGVRGDPRADHAASHVGKALGVCTLLRGIAHHAARRSSVIPSEVMRKNALYSSALFEGPRSPEEAHALAECVYEVASAAKAHMDAAQELI 624
A I+++V ++ GQMRMQFWRD++D+V++ G P QP+ ALA+A+ + W RL+D R A+L+ Q T++DLETYAENTAS +LYL LE GVR D +ADHA SH+GKA+G+ TLLR + HA+ R ++P+E+ K + +F A L + V+EVA+AA HM A+ L+
Sbjct: 56 AGIRESVSNTII-GQMRMQFWRDTIDKVYK----------------------GTPPSQPIAIALAEALKTCSFSSMWIKRLIDEREANLQDPQYMTIKDLETYAENTASQVLYLQLESLGVR-DVQADHAVSHIGKAIGITTLLRAMPFHASHRRMILPAEITAKYNVPQEEVFR----TGHAGGLEDAVFEVATAAHDHMLTARSLV 235
BLAST of mRNA_S-ischiensis_contig83.19950.1 vs. uniprot
Match: H3GT45_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GT45_PHYRM) HSP 1 Score: 144 bits (362), Expect = 7.980e-38 Identity = 82/209 (39.23%), Postives = 121/209 (57.89%), Query Frame = 1
Query: 1 AAIKDAVRGHVVPGQMRMQFWRDSVDEVFRENACAGPPAEGAVGDDLGRGRGGAAPPQPVVQALADAVARHGLTKRWFDRLLDARSADLETQQASTVRDLETYAENTASSLLYLMLEVAGVRGDPRADHAASHVGKALGVCTLLRGIAHHAARRSSVIPSEVMRKNALYSSALFEGPRSPEEAHALAECVYEVASAAKAHMDAAQELIN 627
A IKD+ + + G++RMQ+WR+ + ++ +A AG GR + A +++AL + H LT+RWF+RLLDAR DL+ + ++R+LE YAE TASSLLYL LE GVR D AD A H G A+G+ TLLRG A H++R+ S +P ++M K+ + L P+ +A V++VA A H+ A+ L N
Sbjct: 36 ATIKDSAHSNQITGKIRMQWWRERIYNLYEVSASAG----------AGRPQQSTA----LLRALDQGIQEHDLTRRWFERLLDARDQDLDREDVLSLRELEVYAEQTASSLLYLTLECLGVRDDT-ADRVAGHAGVAIGLATLLRGTAFHSSRQQSYLPEDLMNKHGVTVDDLVAAVEDPKLGEKVAPVVFDVACRAMEHLHQARSLRN 229
BLAST of mRNA_S-ischiensis_contig83.19950.1 vs. uniprot
Match: A0A3M6VPG3_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VPG3_9STRA) HSP 1 Score: 143 bits (361), Expect = 1.470e-37 Identity = 78/207 (37.68%), Postives = 118/207 (57.00%), Query Frame = 1
Query: 1 AAIKDAVRGHVVPGQMRMQFWRDSVDEVFRENACAGPPAEGAVGDDLGRGRGGAAPPQPVVQALADAVARHGLTKRWFDRLLDARSADLETQQASTVRDLETYAENTASSLLYLMLEVAGVRGDPRADHAASHVGKALGVCTLLRGIAHHAARRSSVIPSEVMRKNALYSSALFEGPRSPEEAHALAECVYEVASAAKAHMDAAQEL 621
A IKD+V + + G++R+Q+WR+ + ++ + P + + +++ L AV H LT+RWF+RLLDAR DL+ + +++LE YAE TASSLLYL LE GVR D AD A H G A+G+ TLLRG A+H+AR+ S +P ++M K+ + S L P+ +A V++VA A H+ A+ L
Sbjct: 49 ATIKDSVHSNHITGKIRIQWWRERIYNLYERSTGTERPEQSTL----------------LLRGLDKAVQEHDLTRRWFERLLDARDQDLDRNEVQNLQELEVYAEQTASSLLYLTLECLGVRDDT-ADQVAEHAGVAIGLATLLRGTAYHSARQQSYLPEDLMNKHGVTSEDLLAAVEDPKMGEKVAPVVFDVACRAVEHVHQARSL 238
BLAST of mRNA_S-ischiensis_contig83.19950.1 vs. uniprot
Match: A0A8K1C5K0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C5K0_PYTOL) HSP 1 Score: 144 bits (362), Expect = 1.640e-37 Identity = 81/207 (39.13%), Postives = 120/207 (57.97%), Query Frame = 1
Query: 1 AAIKDAVRGHVVPGQMRMQFWRDSVDEVFRENACAGPPAEGAVGDDLGRGRGGAAPPQPVVQALADAVARHGLTKRWFDRLLDARSADLETQQASTVRDLETYAENTASSLLYLMLEVAGVRGDPRADHAASHVGKALGVCTLLRGIAHHAARRSSVIPSEVMRKNALYSSALFEGPRSPEEAHALAECVYEVASAAKAHMDAAQEL 621
A++KD++R + G++RMQ+WR+++ ++ A A P +++AL+ A+ H LT+RWF+RLLDAR DL+T Q T+ +LE YA+ TA+SLLYL LE GVR D AD AA H G A+G+ TLLRG +H A +P +++ K+ L + + P E LA V+EVA A H+ A++EL
Sbjct: 70 ASVKDSIRSNPATGKIRMQWWRENIYNLYSPRATR------------------AVPETMLLRALSKAIDDHELTRRWFERLLDARDEDLDTDQPHTLHELEVYADKTAASLLYLTLECLGVR-DGAADRAAGHAGVAVGLTTLLRGTPYHLAHNQLYLPEDLLLKHDLTNEHFEAASQDPAEGKKLAPVVFEVACLALEHLRASREL 257
BLAST of mRNA_S-ischiensis_contig83.19950.1 vs. uniprot
Match: A0A6A3ZC49_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3ZC49_9STRA) HSP 1 Score: 144 bits (362), Expect = 1.760e-37 Identity = 81/207 (39.13%), Postives = 123/207 (59.42%), Query Frame = 1
Query: 1 AAIKDAVRGHVVPGQMRMQFWRDSVDEVFRENACAGPPAEGAVGDDLGRGRGGAAPPQPVVQALADAVARHGLTKRWFDRLLDARSADLETQQASTVRDLETYAENTASSLLYLMLEVAGVRGDPRADHAASHVGKALGVCTLLRGIAHHAARRSSVIPSEVMRKNALYSSALFEGPRSPEEAHALAECVYEVASAAKAHMDAAQEL 621
A IKD+V + + G++RMQ+WR+ + ++ +A AG AE L +++ L AV +H LT+RWF+R+LDAR DL+ ++ ++ +LE YAE TASSLLYL LE GVR D AD A H G A+G+ TLLRG A+H++R+ S +P ++M K+ + L + P+ +A V++VA A H+ A+ L
Sbjct: 69 ATIKDSVHSNQITGKIRMQWWRERIYNLYEVSAFAG--AERPQQSTL------------LLRGLDQAVQQHDLTRRWFERMLDARDQDLDREEVQSLHELELYAEQTASSLLYLTLECLGVRDDT-ADRVAGHAGVAIGLATLLRGTAYHSSRQQSYLPEDLMIKHGVTVEDLLAAVKDPKLGEKVAPVVFDVACRAMEHLHQARSL 260
BLAST of mRNA_S-ischiensis_contig83.19950.1 vs. uniprot
Match: K3X1A1_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X1A1_GLOUD) HSP 1 Score: 142 bits (357), Expect = 2.330e-37 Identity = 79/207 (38.16%), Postives = 114/207 (55.07%), Query Frame = 1
Query: 1 AAIKDAVRGHVVPGQMRMQFWRDSVDEVFRENACAGPPAEGAVGDDLGRGRGGAAPPQPVVQALADAVARHGLTKRWFDRLLDARSADLETQQASTVRDLETYAENTASSLLYLMLEVAGVRGDPRADHAASHVGKALGVCTLLRGIAHHAARRSSVIPSEVMRKNALYSSALFEGPRSPEEAHALAECVYEVASAAKAHMDAAQEL 621
A IKD +R + G++RMQ+WR+ + ++ + +G P + +++ L A+ H LT+RWF+RLLDAR DL+T Q + D+E YA+ TA+SLLYL LE G+R D AD ASH G A+G+ TLLRG HH+ + +P +M K+ L FE P + LA V+EVA A H+ A+ L
Sbjct: 13 ATIKDTIRNNQATGKIRMQWWREKIYNLYTSPSSSGNPPQETF----------------LLRGLEKAIHDHDLTRRWFERLLDARDDDLDTDQPLDLSDIEVYADKTAASLLYLTLECLGIRDDT-ADRVASHAGAAIGLATLLRGTPHHSVFQQIYLPENLMLKHNLTVDDHFEASEDPAKGAKLAPVVFEVACCAMEHLHEARAL 202
BLAST of mRNA_S-ischiensis_contig83.19950.1 vs. uniprot
Match: A0A225WMK7_9STRA (NADH dehydrogenase (Fragment) n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WMK7_9STRA) HSP 1 Score: 140 bits (352), Expect = 2.230e-36 Identity = 76/209 (36.36%), Postives = 118/209 (56.46%), Query Frame = 1
Query: 1 AAIKDAVRGHVVPGQMRMQFWRDSVDEVFRENACAGP--PAEGAVGDDLGRGRGGAAPPQPVVQALADAVARHGLTKRWFDRLLDARSADLETQQASTVRDLETYAENTASSLLYLMLEVAGVRGDPRADHAASHVGKALGVCTLLRGIAHHAARRSSVIPSEVMRKNALYSSALFEGPRSPEEAHALAECVYEVASAAKAHMDAAQEL 621
A IKD+V + + G++RMQ+WR+ + ++ +A AG P + +++ L A+ H LT+RWF+RLLDAR D++ ++ + +LE YAE TASSLLYL LE G+R D AD A H G A+G+ TLLRG +H++R+ S +P ++M K+ + L P+ +A V++VA A H+ A+ L
Sbjct: 33 ATIKDSVHSNQITGKIRMQWWRERIYNLYDGSALAGANRPEQSTA----------------LLRGLDKAIQEHDLTRRWFERLLDARDQDIDREEVQNLHELELYAEQTASSLLYLTLECLGIRDDT-ADRVAGHAGVAIGLATLLRGTPYHSSRQQSYLPEDLMNKHGVTDEDLIAAVEDPKLGEKIAPVVFDVACRAMEHLHQARAL 224 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig83.19950.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig83.19950.1 >prot_S-ischiensis_contig83.19950.1 ID=prot_S-ischiensis_contig83.19950.1|Name=mRNA_S-ischiensis_contig83.19950.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=217bp MRMQFWRDSVDEVFRENACAGPPAEGAVGDDLGRGRGGAAPPQPVVQALAback to top mRNA from alignment at S-ischiensis_contig83:96056..97581- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig83.19950.1 ID=mRNA_S-ischiensis_contig83.19950.1|Name=mRNA_S-ischiensis_contig83.19950.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1526bp|location=Sequence derived from alignment at S-ischiensis_contig83:96056..97581- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig83:96056..97581- >mRNA_S-ischiensis_contig83.19950.1 ID=mRNA_S-ischiensis_contig83.19950.1|Name=mRNA_S-ischiensis_contig83.19950.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1302bp|location=Sequence derived from alignment at S-ischiensis_contig83:96056..97581- (Schizocladia ischiensis KU_0333)back to top |