|
|
Homology
BLAST of mRNA_S-ischiensis_contig82.19917.1 vs. uniprot
Match: A0A835Z5U5_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5U5_9STRA) HSP 1 Score: 326 bits (835), Expect = 1.040e-101 Identity = 175/293 (59.73%), Postives = 213/293 (72.70%), Query Frame = 2
Query: 485 IPVLSGAGAGAICSVLCSPLDVAKIRVQVQDVVLPPGRPRKYGGVVPTLRTIWAEEGVLGWYKGLTPAMICIPIFWGIYFHVYETAKAAFRRQTGDEHHLLSAISAGAVTDVVTNPFWVVRTRMQTQVLHV-LEEGGRGVSMSMVETFRHVWATEGIRAFYRGLTASLLGLSHVAIQFPVYERLKAVARERNNGGG-----ERPSDLILASAASKVVGSCVTYPHEVLRARMQDERARPRSRPKGLVSTFQSVVRLGGYRALYTGFQLNMFRVVPSCVATFLSYEIISRELRA 1345
+P ++GAGAG ICSVLCSPLDVAK R+QVQ V KY GV+PTLRTI AEEGV GWY+G+TPA++ +PIFWGIYF VYE AK F TG E H+LSAISAG V DV TNPFWVVRTRMQTQ +H L + R + M+ TFR + A EG+ AF+RGLTASLLGL HVAIQFP+YER K++AR+R G E P +L ASA SK+ + +TYPHEVLR+RMQD R P+ GL + +VR G RAL+TGF +N+ RVVPSCVATF+SYE+I+R++ A
Sbjct: 20 VPSIAGAGAGMICSVLCSPLDVAKTRIQVQGAVCSTSNTAKYRGVLPTLRTILAEEGVRGWYQGITPALVIVPIFWGIYFGVYERAKRGFVSVTGAEQHVLSAISAGLVADVCTNPFWVVRTRMQTQAMHSELPQNAR--HLGMLATFRQIHAKEGVLAFWRGLTASLLGLGHVAIQFPLYERFKSLARDRRRKLGHVDTSESPLELAAASACSKLASTWLTYPHEVLRSRMQDARG-PQM---GLRAIATELVRQEGMRALWTGFGINLVRVVPSCVATFVSYELITRQVPA 306
BLAST of mRNA_S-ischiensis_contig82.19917.1 vs. uniprot
Match: A0A7R9UD11_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UD11_9STRA) HSP 1 Score: 277 bits (708), Expect = 3.190e-82 Identity = 147/296 (49.66%), Postives = 201/296 (67.91%), Query Frame = 2
Query: 494 LSGAGAGAICSVLCSPLDVAKIRVQVQDVVL---PPGRPRKYGGVVPTLRTIWAEEGVLGWYKGLTPAMICIPIFWGIYFHVYETAKAAFRR---QTGDEHHLLSAISAGAVTDVVTNPFWVVRTRMQTQVLHV-LEEGGRGVSMSMVETFRHVWATEGIRAFYRGLTASLLGLSHVAIQFPVYERLKAVARERNNGGGERPSDLILASAASKVVGSCVTYPHEVLRARMQDERARPRSRPK---GLVSTFQSVVRLGGYRALYTGFQLNMFRVVPSCVATFLSYEIISRELRARL 1351
+SGAGAG +C+++CSPLDV K R QVQ VL Y G++ T+RTI+AEEG G+Y+GL PA+ +PIFWG+YF YE K+ RR Q + +AI AGA+ DV TNP WVVRTRMQTQ LH + + R S RH+ AT+G++ +RG++AS LGL HVA+QFP+YE LK ++RE N+G ER DL+ ASAASK+ GS ++YPHEV+RAR+QD S+P GL+ T +V+ G++ALYTGF++N+ RV+PSCV F++YE++ +LRA +
Sbjct: 76 VSGAGAGVVCTLVCSPLDVLKTRFQVQGAVLRSTADTTAEAYKGILRTVRTIFAEEGFAGFYRGLGPALFTVPIFWGLYFPTYEALKSLLRRDGQQLTTAEIVSAAIGAGAIVDVATNPLWVVRTRMQTQHLHSRVGDLNRVKYSSSWRALRHIVATDGVQGLFRGISASFLGLIHVAVQFPIYEHLKQLSREANHGK-ERKMDLVGASAASKICGSVISYPHEVIRARLQDS-----SKPMEVTGLLRTVYDIVKYEGWQALYTGFRINLIRVIPSCVTVFVTYELLVNQLRAMI 365
BLAST of mRNA_S-ischiensis_contig82.19917.1 vs. uniprot
Match: A0A836CIH5_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIH5_9STRA) HSP 1 Score: 264 bits (674), Expect = 8.920e-79 Identity = 144/287 (50.17%), Postives = 188/287 (65.51%), Query Frame = 2
Query: 485 IPVLSGAGAGAICSVLCSPLDVAKIRVQVQDVVLPPGRPRKYGGVVPTLRTIWAEEGVLGWYKGLTPAMICIPIFWGIYFHVYETAKAAFRRQTGDEHHLLSAISAGAVTDVVTNPFWVVRTRMQTQVLHVLEEGGRGVSMSMVETFRHVWATEGIRAFYRGLTASLLGLSHVAIQFPVYERLKAVARERNNGGGER----PSDLILASAASKVVGSCVTYPHEVLRARMQDERARPRSRPKGLVSTFQSVVRLGGYRALYTGFQLNMFRVVPSCVATFLSYEIISR 1333
+P L+GAGAG ICS+LCSPLDVAK R+QVQ + KY GV PTL+TI AEEG+ GWYKG+TPA++ +P+FWGIYF VYE +K FRR TG+E H+LSA++ TD +TNPFWVVRTRMQTQV +S ++R T +FP+YERLKA+A ER G+ P ++ ASAASK+ + VTYP+E+LRARMQD+R+R P L + + +VR G RAL+TGF++NM RV+PSC+ATF+SYE+I+R
Sbjct: 16 VPSLAGAGAGIICSLLCSPLDVAKTRIQVQGALAKGAA--KYTGVCPTLKTILAEEGIQGWYKGITPALVIVPVFWGIYFGVYEHSKGFFRRTTGNEQHVLSAMATSGFTDTITNPFWVVRTRMQTQV-----------ELSSRNSYRTTLHT----------------------RFPLYERLKAMAVERRRRSGDASPVSPVEVAAASAASKLASTWVTYPNELLRARMQDQRSRT---PPSLRALVREIVRTEGVRALWTGFRVNMVRVLPSCMATFVSYELIAR 264
BLAST of mRNA_S-ischiensis_contig82.19917.1 vs. uniprot
Match: A0A7S1XSX1_9STRA (Hypothetical protein n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XSX1_9STRA) HSP 1 Score: 263 bits (673), Expect = 3.750e-77 Identity = 141/288 (48.96%), Postives = 189/288 (65.62%), Query Frame = 2
Query: 494 LSGAGAGAICSVLCSPLDVAKIRVQVQDVVL----PPGRPRKYGGVVPTLRTIWAEEGVLGWYKGLTPAMICIPIFWGIYFHVYETAKAAFR-RQTGDE----HHL-LSAISAGAVTDVVTNPFWVVRTRMQTQVLHV-LEEGGRGVSMSMVETFRHVWATEGIRAFYRGLTASLLGLSHVAIQFPVYERLKAVARERNNGGGERPSDLILASAASKVVGSCVTYPHEVLRARMQDERARPRSRPKGLVSTFQSVVRLGGYRALYTGFQLNMFRVVPSCVATFLSYEI 1324
+SGAGAG +C+++CSPLDV K R QVQ V+ Y G++ T+RT+ EEG G+Y+GLTPA++ +PIFWG+YF YE KA R G E H + L+A+ AG + D+ TNP WVVRTRMQTQ LH + + R ++ + RH+ AT+G+ +RGL+AS LGL+HVA+QFP+YE LK ++RE NNG ER DL+ ASA SKV G V+YPHEVLRARMQD L+ T +VR G++ YTG +N+ RV+PSCV TF++YE+
Sbjct: 71 VSGAGAGVVCTLVCSPLDVLKTRFQVQGAVMRQTGSAAEQESYHGILRTVRTMVMEEGAAGFYRGLTPALVTVPIFWGLYFPTYEGLKATLEARNPGRERLQTHEIILAAMGAGIIVDITTNPLWVVRTRMQTQHLHSRVGDHARDRYKTITGSLRHILATDGVAGLFRGLSASFLGLTHVAVQFPIYEHLKRLSRENNNGK-ERKIDLVFASAFSKVCGCVVSYPHEVLRARMQDSSKNMSG--SSLIRTAGDLVRNEGWQTFYTGLYVNLVRVIPSCVTTFVTYEV 355
BLAST of mRNA_S-ischiensis_contig82.19917.1 vs. uniprot
Match: A0A7S3MDK1_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MDK1_9STRA) HSP 1 Score: 251 bits (641), Expect = 4.200e-73 Identity = 140/308 (45.45%), Postives = 202/308 (65.58%), Query Frame = 2
Query: 491 VLSGAGAGAICSVLCSPLDVAKIRVQVQDVVLPPGRPRKYGGVVPTLRTIWAEEGVLGWYKGLTPAMICIPIFWGIYFHVYETAKAAFRRQ-----TGDEHHLLSAISAGAVTDVVTNPFWVVRTRMQTQVLHVLEEGGRGVSMSMVETFRHVWATEGIRAFYRGLTASLLGLSHVAIQFPVYERLKAVARERNNGGGERPSDLILASAASKVVGSCVTYPHEVLRARMQDER---------------ARPRSRPK--GLVSTFQSVVRLGGYRALYTGFQLNMFRVVPSCVATFLSYEIISRELRAR 1348
+L+GAGAG +C++LC+PLDV KIR+QVQ + G R GV +++ I+ EEG+ G +KG+ PA++ +P+FWG+Y+ +Y+ +KA F TG H+++A++AGA+ DV+TNPFWVVRTR+QT LH E ++S VE + ++ EG +AFY+GL AS LGLSHVAIQFP+YE LK VAR R E +L+ +S A+K+V S +TYPHEVLRAR+QD R A + P GLV+ F+ +V+ G +L++G ++++FRVVP+ +TFL+YE IS L R
Sbjct: 26 LLAGAGAGVVCTILCAPLDVTKIRMQVQGSL---GTKRYSAGVFSSVKRIYIEEGLRGVFKGIGPALVTVPLFWGVYWPIYDRSKAYFESNPAFSVTGG--HIMAAVTAGAIGDVITNPFWVVRTRIQTLALH--SESRIAANVSTVEMMKIIYHNEGWKAFYKGLGASFLGLSHVAIQFPLYEYLKNVAR-RGEDRRETFFELLFSSIAAKLVASSITYPHEVLRARLQDGRGVTYNKKMSMNAASSASVTAEPAKLGLVAVFRDIVKREGVLSLWSGLRVSLFRVVPATASTFLAYEYISHYLHER 325
BLAST of mRNA_S-ischiensis_contig82.19917.1 vs. uniprot
Match: F2TZA2_SALR5 (NAD+ transporter n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2TZA2_SALR5) HSP 1 Score: 241 bits (614), Expect = 2.130e-69 Identity = 134/299 (44.82%), Postives = 185/299 (61.87%), Query Frame = 2
Query: 491 VLSGAGAGAICSVLCSPLDVAKIRVQVQDVVLPPGRPRKYGGVVPTLRTIWAEEGVLGWYKGLTPAMICIPIFWGIYFHVYETAKAAFRRQT-GDE---HHLLSAISAGAVTDVVTNPFWVVRTRMQTQVLH---------VLEEGGRGVSMSMVETFR---HVWATEGIRAFYRGLTASLLGLSHVAIQFPVYERLKAVARERNNGGGERPSDLILASAASKVVGSCVTYPHEVLRARMQDERARPRSRPKGLVSTFQSVVRLGGYRALYTGFQLNMFRVVPSCVATFLSYEIISREL 1339
+++GAGAG I VLCSPLDVAK+R Q+Q +P G P KY GV T+RTI+ EEG G ++GL P+++ +P+FW IYF VY + GD H ++AI+AG D TNP WVVRTRM + + H + G +++ + FR ++ TEG+ A Y+GL+AS+LGLSHVAIQFPVYE+ K AR N E DLI++SA SK + S +TYPHEV+R+R+QD R+R R R ++ G+ + G Q+N+ RV+PSCV F+SYE+ISR +
Sbjct: 11 MMAGAGAGVINCVLCSPLDVAKVRQQLQGAFVP-GSP-KYEGVFSTVRTIYKEEGAPGLFRGLRPSLMTMPLFWAIYFPVYGAMNQRLALMSNGDSATWQHCVAAITAGFAADCATNPLWVVRTRMISDIYHSPDTPTPSGLAPNGAESPAVTRLGVFRRMLYIGRTEGVTALYKGLSASMLGLSHVAIQFPVYEKFKQFARRHRNDSKETILDLIVSSALSKAIASTITYPHEVVRSRLQDSRSRTRLR-----DVVHRIMVEEGWHGFFRGLQVNLVRVLPSCVTVFVSYELISRAI 302
BLAST of mRNA_S-ischiensis_contig82.19917.1 vs. uniprot
Match: K0R986_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R986_THAOC) HSP 1 Score: 239 bits (609), Expect = 3.020e-68 Identity = 127/298 (42.62%), Postives = 191/298 (64.09%), Query Frame = 2
Query: 491 VLSGAGAGAICSVLCSPLDVAKIRVQVQDVVLPPGRPRKYGGVVPTLRTIWAEEGVLGWYKGLTPAMICIPIFWGIYFHVYETAKAAFRRQT------GDEH----HLLSAISAGAVTDVVTNPFWVVRTRMQTQVLHVLEEG-GRGVSMSMVETFRHVWATEGIRAFYRGLTASLLGLSHVAIQFPVYERLKAVARERNNGGGERPSDLILASAASKVVGSCVTYPHEVLRARMQDERARPRSRPKGLVSTFQSVVRLGGYRALYTGFQLNMFRVVPSCVATFLSYEIISRELRARL 1351
+++G G+G++ SV+C+PLD+ + R+QV + + + ++ +L I+ +G G ++GL + +P+FWGIYF +YET K+ T G+ H HL SA+SAGA+ DV+ NP +V+R RMQT+ LH LE+ + + T R ++ GI F+RGLTASLLGL HV IQFPVYERLK AR+R+ G E P DL+LAS SK+ + +TYPHEV+R+RM D R+ + G++ T + +V+ GY LY+G ++ +FRVVP+C TF+SYE+I+R +R +
Sbjct: 42 LIAGIGSGSLASVVCAPLDLVRTRLQVAGAI--ENKVSQSPQILKSLHEIYRTDGFRGCFRGLGATLATVPMFWGIYFPLYETFKSRMMDATREGGDGGNNHRALVHLSSAVSAGAIADVICNPLFVIRVRMQTEALHYLEKAPSERKPNNALTTMRGLYREGGIPIFWRGLTASLLGLGHVGIQFPVYERLKMEARKRSATGEESPVDLLLASGISKMTAAILTYPHEVIRSRMMDSRS---TASMGILDTARHIVKHEGYAGLYSGIKVTLFRVVPNCCVTFVSYELIARWVRKEM 334
BLAST of mRNA_S-ischiensis_contig82.19917.1 vs. uniprot
Match: A9VCV4_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9VCV4_MONBE) HSP 1 Score: 232 bits (591), Expect = 6.520e-66 Identity = 131/291 (45.02%), Postives = 183/291 (62.89%), Query Frame = 2
Query: 491 VLSGAGAGAICSVLCSPLDVAKIRVQVQDVVLPPGRPRKYGGVVPTLRTIWAEEGVLGWYKGLTPAMICIPIFWGIYFHVYETAKAAFRRQTGDEHHL--------LSAISAGAVTDVVTNPFWVVRTRMQTQVLHVLEEGGRGVSMSMVETFRHVWATEGIRAFYRGLTASLLGLSHVAIQFPVYERLKAVARERNNGGGERPSDLILASAASKVVGSCVTYPHEVLRARMQDERARPRSRPKGLVSTFQSVVRLGGYRALYTGFQLNMFRVVPSCVATFLSYEIISREL 1339
+L+GAG G + +++CSPLDVAK+R QV+ V+ P G + G+ LR I +EG GW++GL P++I +P FW YF +Y+ AFRR+ G E + L+A+ A V DV+TNP WVVRTR+ + V H E+ +S+ H+ EGI A Y+GL AS LGL HVAIQFP+YE LK AR+ + G E LILASA SK+V +TYPHEV+RARMQD R P GL S +++++ G+R Y G +N+ RV+PSC+ TF++YE+I + +
Sbjct: 43 ILAGAGGGLVNALVCSPLDVAKVRQQVEGVIHP-GTSHQ-AGLWTILRDIRNQEGYRGWFRGLQPSLITLPFFWATYFPLYD----AFRRRLGVEPNTRGAVWKSCLAAMGAAGVVDVLTNPLWVVRTRIISAVYHRTEQAVLQ-RLSVPGHMLHIAKHEGITALYKGLGASFLGLLHVAIQFPLYEELKHRARDASPDGRESILGLILASAGSKLVAGTITYPHEVVRARMQDSR-----NPAGLASIAKNILQADGWRGFYRGLHINILRVLPSCITTFVTYELIKQAI 321
BLAST of mRNA_S-ischiensis_contig82.19917.1 vs. uniprot
Match: A0A7S0BYA5_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BYA5_9STRA) HSP 1 Score: 233 bits (593), Expect = 1.410e-65 Identity = 129/306 (42.16%), Postives = 188/306 (61.44%), Query Frame = 2
Query: 491 VLSGAGAGAICSVLCSPLDVAKIRVQVQD--VVLPPGRPRKYGGVVP---------TLRTIWAEEGVLGWYKGLTPAMICIPIFWGIYFHVYETAKAAFRRQTGD--EH----HLLSAISAGAVTDVVTNPFWVVRTRMQTQVLHVLEEGGRGVS--MSMVETFRHVWATEGIRAFYRGLTASLLGLSHVAIQFPVYERLKAVARERNNGGGERPSDLILASAASKVVGSCVTYPHEVLRARMQDERARPRSRPKGLVSTFQSVVRLGGYRALYTGFQLNMFRVVPSCVATFLSYEIISRELRARL 1351
+ +G G+G + SV+C+PLD+ + R+QV + PG G V TL+TI ++GV G ++GL+ M+ +P FWG+YF +YE K+ D EH H+ SA+ AG ++D NP +V+RTRMQT+ LH+ + +S+ T + +++ G F+RGLTASL+GLSHVAIQFPVYE LKA AR+RN+ E P DL+LAS SKV + + YPHEV+R+RM D R ++ ++ST +++VR GYR LY G + + RVVP+C TF++YE++ R R RL
Sbjct: 73 LFAGIGSGTVASVICAPLDLIRTRMQVLGGLTIAKPGSAGGAGAVASELPSESIYQTLQTIVKKDGVKGCFRGLSATMLTVPAFWGMYFPLYEECKSHLHELYNDKNEHDHFVHMTSAVLAGGISDFTCNPMFVIRTRMQTEALHMSFNSTNEIRKPLSIARTAKSLYSEAGFFVFWRGLTASLMGLSHVAIQFPVYEWLKAEARKRNDDNVENPLDLLLASGMSKVCATTLAYPHEVIRSRMMDARG---NKSVNVLSTSRTIVRNEGYRGLYKGLNVALIRVVPNCCITFMTYEMLLRWCRGRL 375
BLAST of mRNA_S-ischiensis_contig82.19917.1 vs. uniprot
Match: B8BS39_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BS39_THAPS) HSP 1 Score: 227 bits (578), Expect = 2.290e-64 Identity = 127/303 (41.91%), Postives = 188/303 (62.05%), Query Frame = 2
Query: 491 VLSGAGAGAICSVLCSPLDVAKIRVQVQDVVLPPGRPRKYGGVVPTLRTIWAEEGVLGWYKGLTPAMICIPIFWGIYFHVYETAKAAFRRQTGD------EHHLL----SAISAGAVTDVVTNPFWVVRTRMQTQVLH-----VLEEGGRGVSMSMVETFRHVWATEGIRAFYRGLTASLLGLSHVAIQFPVYERLKAVARERNNGGGERPSDLILASAASKVVGSCVTYPHEVLRARMQDERARPRSRPKGLVSTFQSVVRLGGYRALYTGFQLNMFRVVPSCVATFLSYEIISRELRARLG 1354
+ +G G+G++ S++C+PLD+ + R+QV + + +V ++ I+ +GV G ++GL + +P FWG+YF +YE+ K + D HH L SAI+AG + DVV NP +VVRTRMQT+ LH V + GV +++ ++ GI F+RGLTASLLGL HV IQFPVYERLKA AR+R+ G E P DL+LAS SK+ + +TYPHEV+R+RM D AR + + +T +V+ GY LY G ++++ RVVP+C TF+SYE+I+R +RA++G
Sbjct: 1 MFAGVGSGSLASIVCAPLDLVRTRMQVAGGL---DGAKANPKIVQSIYEIYLSDGVRGCFRGLGATLATVPAFWGLYFPMYESFKRKILEWSSDYGDGGHNHHALVHLGSAITAGGLADVVCNPMFVVRTRMQTEALHYFHMPVADRKPHGVMSTVLSLYKE----GGIPIFWRGLTASLLGLGHVGIQFPVYERLKAEARKRSPTGEESPVDLLLASGLSKMSAAIITYPHEVVRSRMMD--ARGATAGMNIFNTIGHIVKTEGYSGLYVGLRVSLVRVVPNCCVTFVSYELIARWVRAQMG 294
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Opisthokonta |
| Seed ortholog score | 244.6 |
| Seed ortholog evalue | 6.9e-62 |
| Seed eggNOG ortholog | 946362.XP_004997882.1 |
| KEGG ko | ko:K15115 |
| KEGG TC | 2.A.29.10.1,2.A.29.10.2,2.A.29.10.3,2.A.29.10.5 |
| GOs | GO:0003674,GO:0005215,GO:0005342,GO:0005477,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006810,GO:0006811,GO:0006820,GO:0006839,GO:0006848,GO:0006850,GO:0006862,GO:0008028,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015215,GO:0015291,GO:0015318,GO:0015355,GO:0015605,GO:0015711,GO:0015718,GO:0015748,GO:0015849,GO:0015931,GO:0015932,GO:0016020,GO:0016021,GO:0019866,GO:0022804,GO:0022857,GO:0031090,GO:0031224,GO:0031966,GO:0031967,GO:0031975,GO:0034220,GO:0035352,GO:0043132,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046942,GO:0046943,GO:0050833,GO:0051179,GO:0051181,GO:0051182,GO:0051184,GO:0051185,GO:0051234,GO:0051724,GO:0055085,GO:0071702,GO:0071705,GO:0098656,GO:1901475,GO:1901679,GO:1903825,GO:1905039,GO:1990542,GO:1990549 |
| EggNOG free text desc. | Belongs to the mitochondrial carrier (TC 2.A.29) family |
| EggNOG OGs | 38GH3@33154,KOG0764@1,KOG0764@2759 |
| COG Functional cat. | C |
| Best tax level | Opisthokonta |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko02000 |
| Hectar predicted targeting category | other localisation |
| Exons | 7 |
| Model size | 2423 |
| Cds size | 1047 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817321.2917895-UTR-S-ischiensis_contig82:276143..277128 | 1622817321.2917895-UTR-S-ischiensis_contig82:276143..277128 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig82 276144..277128 - |
| 1695741024.9867988-UTR-S-ischiensis_contig82:276143..277128 | 1695741024.9867988-UTR-S-ischiensis_contig82:276143..277128 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig82 276144..277128 - |
| 1622817321.392143-UTR-S-ischiensis_contig82:286970..287361 | 1622817321.392143-UTR-S-ischiensis_contig82:286970..287361 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig82 286971..287361 - |
| 1695741025.0881329-UTR-S-ischiensis_contig82:286970..287361 | 1695741025.0881329-UTR-S-ischiensis_contig82:286970..287361 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig82 286971..287361 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817321.3044665-CDS-S-ischiensis_contig82:277128..277307 | 1622817321.3044665-CDS-S-ischiensis_contig82:277128..277307 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig82 277129..277307 - |
| 1695741025.0007164-CDS-S-ischiensis_contig82:277128..277307 | 1695741025.0007164-CDS-S-ischiensis_contig82:277128..277307 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig82 277129..277307 - |
| 1622817321.3177004-CDS-S-ischiensis_contig82:278837..278931 | 1622817321.3177004-CDS-S-ischiensis_contig82:278837..278931 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig82 278838..278931 - |
| 1695741025.0106356-CDS-S-ischiensis_contig82:278837..278931 | 1695741025.0106356-CDS-S-ischiensis_contig82:278837..278931 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig82 278838..278931 - |
| 1622817321.329144-CDS-S-ischiensis_contig82:279132..279285 | 1622817321.329144-CDS-S-ischiensis_contig82:279132..279285 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig82 279133..279285 - |
| 1695741025.0245125-CDS-S-ischiensis_contig82:279132..279285 | 1695741025.0245125-CDS-S-ischiensis_contig82:279132..279285 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig82 279133..279285 - |
| 1622817321.3407362-CDS-S-ischiensis_contig82:281122..281269 | 1622817321.3407362-CDS-S-ischiensis_contig82:281122..281269 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig82 281123..281269 - |
| 1695741025.04073-CDS-S-ischiensis_contig82:281122..281269 | 1695741025.04073-CDS-S-ischiensis_contig82:281122..281269 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig82 281123..281269 - |
| 1622817321.3538501-CDS-S-ischiensis_contig82:282438..282592 | 1622817321.3538501-CDS-S-ischiensis_contig82:282438..282592 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig82 282439..282592 - |
| 1695741025.0536113-CDS-S-ischiensis_contig82:282438..282592 | 1695741025.0536113-CDS-S-ischiensis_contig82:282438..282592 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig82 282439..282592 - |
| 1622817321.3649392-CDS-S-ischiensis_contig82:283809..283945 | 1622817321.3649392-CDS-S-ischiensis_contig82:283809..283945 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig82 283810..283945 - |
| 1695741025.0682445-CDS-S-ischiensis_contig82:283809..283945 | 1695741025.0682445-CDS-S-ischiensis_contig82:283809..283945 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig82 283810..283945 - |
| 1622817321.378605-CDS-S-ischiensis_contig82:286786..286970 | 1622817321.378605-CDS-S-ischiensis_contig82:286786..286970 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig82 286787..286970 - |
| 1695741025.0770612-CDS-S-ischiensis_contig82:286786..286970 | 1695741025.0770612-CDS-S-ischiensis_contig82:286786..286970 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig82 286787..286970 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig82.19917.1 >prot_S-ischiensis_contig82.19917.1 ID=prot_S-ischiensis_contig82.19917.1|Name=mRNA_S-ischiensis_contig82.19917.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=349bp
MATPGTKRPRTPSAKTPVDGAGGPQSWLVPCIPVLSGAGAGAICSVLCSP
LDVAKIRVQVQDVVLPPGRPRKYGGVVPTLRTIWAEEGVLGWYKGLTPAM
ICIPIFWGIYFHVYETAKAAFRRQTGDEHHLLSAISAGAVTDVVTNPFWV
VRTRMQTQVLHVLEEGGRGVSMSMVETFRHVWATEGIRAFYRGLTASLLG
LSHVAIQFPVYERLKAVARERNNGGGERPSDLILASAASKVVGSCVTYPH
EVLRARMQDERARPRSRPKGLVSTFQSVVRLGGYRALYTGFQLNMFRVVP
SCVATFLSYEIISRELRARLGPKGGDLAAVAPDRETLGRTKTSANAEF* back to topmRNA from alignment at S-ischiensis_contig82:276144..287361- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig82.19917.1 ID=mRNA_S-ischiensis_contig82.19917.1|Name=mRNA_S-ischiensis_contig82.19917.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=11218bp|location=Sequence derived from alignment at S-ischiensis_contig82:276144..287361- (Schizocladia ischiensis KU_0333)
GCAGTACCATTGACGCTGCTGCCCGGCACCCGCGCGACTGCCACTCACTT
ACTGCACTGCCATTGGCCCAGTGGGCCCCGGCCCGGCCCGGCCAGACTCT
GATGAGACCCCGGGCCGGCGACCGTGGCGGCTTGGAAGGCGTGTTGCCAC
GGACCGCAGGACGGAGAGACAGGCGCACCTGCCGGCAAGGGTAGCCAGCA
GAATACAAGATCAAGGCGTAGATATCGCCAATATGGTCACCAGCATGGCG
AAGTGTCACACGGCCGTGTAACCGATGTCGGCGTTGTCGTCCCGGCGGGC
TTAAAACGTCAGACCGGAGCCGCCCCTGGAGTGAGACACAGCCCCAGCTT
CGTGTAATTCTCAAGGTGGTGAGCGCTCTGGTAAGGTTAGCATGGCTACG
CCTGGAACGAAACGGCCCCGAACGCCCTCAGCAAAAACTCCGGTGGACGG
CGCGGGCGGCCCGCAGAGCTGGCTGGTGCCCTGCATCCCCGTATTGTCGG
GGGCGGGGGCTGGGGCGATTTGCTCGGTGCTGTGCTCGCCGCTGGACGTG
GCCAAGATCCGTGTCCAAGTGCAGGGTGAGTCGTGAGTAACGATGGCACA
AAAGTGCGATCACTATTTTTGGTGCCCGGGCCGCCCTATGAAGGACGCGT
CGGATGACCGTGAAATTTTTGACGCATGAAAGAGCTCGATGAGTACGGTC
ATTTGCGCTATAGCTTTCGTATCACAGCATCACATGGACCGAGCAACACG
TTGATCGATATTCGATAAAACTGTTTGGGGCAAAAAAAATGCGCCTTTGT
GCCAGGGTGAGCCGTGAGGTCAGCACGTGGGGAGCCGCAATATATCCCTG
TGTATGGCTTGAGATAGTGCTGAGAGATACTATATATATGTACTCACGTG
GTGCTTGCCTTAGGCCCGAGACCATTGACCCCGCGCCTCGTTCGAGACGG
AGGAGGACCCCTCCCTCCCCTGGCAGAGCCAGTGTGGGAGGGGGCGGCCA
CTGCCCCGCCAGAAGCGGAGGGGCGGCCAAGTCCATACCCCCCCCATCCC
GGACGCCTGAGAGTCCGGGTGGGGGGGGCCCCTCCCCTGCTAGATACTAC
GAAATATACCCTGTGCATGGCTCGAGATAGTACTGAGAGGTGAGAGGTGT
GTGTAGTCACGTCTCTGTGCATGCCCTGGACCCGAACGATCCTCGTCTTT
GCTCCTTCTCGTGGATCGCTGGCCAGCTGTAGCCGAAGCCATTGGCCACG
CGTCCCATGGATGGAGCACGCCGGGTGTTTTAGATAGGTACAGCTCGTAT
GTGATGTGATGAGACGGGCAGTGCACTGTAACCATGGTACAAAAGTGCGA
TTTTTTTTGCCCAAATAGTTTTTGTCAATAGCGAAAATTTTCGCCCAAAT
TGCGATCGAAAACCAACCCAAATATCGAAAAAAACAGCGAAATATCGATG
CCGGGCTGCAAAACGCCTTGTCAAGGTATGTAAACCCCGAGGGTATTGGC
TCCGAAAATCCTTGGGTTTCCATGCCTTGAGGCATTTGGTGGGGTGTCCA
AACCTTGATAAGGCGTTTGGGCATCGAAGGCCCAAGAACTTGCCCAAGTA
TCGATATTTTCCTAAGAATATCGATTTGGTCGACTTCACGGCCCAAATTG
CCATTGTTGTTGCACTCAGTCGACGTAGTTAAAAACTCGTTTTTCCCGAT
AACGGGGACACCTTCGCCGTCCGTTTTCGACAGTATGGTACTGAGGAGAT
GGGGCTGTCTTTTGCCCGTGCTCCCGGCTCATTCCTCGTCGATTTGCCGC
GCGATCGGGGCAGCAGTTCAGCCGTTGTCGATATCCGAAAATCCGAAAAT
TGTTTTTAACTAGACCCCTCCTCCGCTGTCATTTTCTCCCGCCCTCTTCC
TCCTTTGGCTTTCTTGGTTTTTCTTGGTTTTCTGCTCTATGTGCCCTGCG
AGTGAAGGCGAGTGAAGAGACGGGCTTCCGGGGTGGGGGGCGCTGAACTG
GCGTAAGTAGGAACACCTCCTCTTTTCCACTCGCTTTTTATCTTCATGCC
AAAAACTAGTTTGCTTGACTGTTACGTTGCACTTTTGTACCATGGTTAGT
GCACTGAGGGGCTCAACTCTTCCTTGGTTGGGAAAGTCGTTCTGTTCTTG
ACATACGCTGTACAATACTTGATTGATTAAGCCTCGCTCGGCTTGACTGG
CGTTTATCAGCTAAAGAACATGCTACTATAATGTCGTCGCTGCTTCTAAC
GATAGTACGTAGGCGAGCTCCGCCGGGCAACTGTGCTGTTGTACTACTAC
GAGGTACTGTATATTGTACCGAAGTATATATATGTACTCATGTTGTGCTT
GCCGTAGTCCCGAGACCAGTGACACCACTCCTCGATTGTACTTCGTAGTC
CTTGCAATACAGCACTCGTGGGAAGTTAGACCGAGAGAGAGGGGGGGAGA
GGAGAGAGGGAGAGGGAGAGAGACGGGGGGGGGGAGGGAGAGAGGGAGCA
GGCGAGAGAGAGAGAGTTTCGACCTTCTCGAGGAAGCTTTTGGGAAAATA
CCGAGACAACAAAGAGAGCAGGCCTCGGTGACTTAACAGGGACGACTGGA
CGGAAGGACACGGTTGGGTGAGACAATTCCCTGCCTCCGCAACCCAGCCT
CCTTTGCCGACGGATGCCATCCTGGGCACCCCTTGTCGGCCACGCAAGTA
CAGGGGGTGAGCAGAGACACTTCCCCCGCCTTCTGCCGACAGATGCCGTC
CTCCCCCCTGGCCCAGGGTTGGCACTTGCTTCGTAGATGTTAATTAGGGC
CTAATTAGCCTTCATTTCAGGTCTAATTACCCCCAATTACCTCTATTTAG
GGGCCTGAAAGGGCAACACTTAGGTGAGGGGTTACGTGCCAACCCTGCCC
CGCCCGGTCCCACAGGCGCGAGGGGTGAGCGGAGATATTTGTCCCATCCG
CGTTCCGACCCCCCCGACCCCCCTTTGCCGATGCTAATACTATCGCGAGC
ACGAGAACACTCAATCCTTCAATGGGACAACTATATATGTACTCACGTGG
TGCTTGTCGTAGTCCCGAGACCATTGACGCCGCGCCTCATTCGAGACGGA
GCAGTTACTGTACATACTAGTACGAGAATACGTGCGATTGTACCTCATTG
CCATTCATATGAATCAACCCCATCTGCCGACCGATGTTGTCCTGCCCCCT
GGCCGGCCCCGCGAGCACAGGGGGTGAGGGGAGATATTTATCCCATCCGC
GGTCTGACCCCCCCAACCCCCCTCGATTGTACCTTGTTACCATTATTTGA
GTGGTAACTTAGATAAGTAAGCAGCGAGTTCCACCCCCCGTGCCCAAAAG
GCTCGTCTCAACGAAGCCCTTCTTCGGATTGATAATGGATCGCCCCCGAC
CCCCCTCTGCCGACAGATGTTGTCCTGCCCCCTGGCCGGCCGCGCAAGTA
TGGAGGCGTTGTCCCGACGCTGAGGACGATCTGGGCGGAGGAGGGGGTGC
TGGGGTGGTACAAGGGTCTCACACCGGCCATGATCTGCATACCTATTTTC
TGGTGAGTGTGTGTACTCACGTCTCTGTGCATGCCCTGGACCTGAACGAT
CCTCGTCTTTGCTCCTTCACGTGGATCACGGGCCGGCTGTAGCCAAAGGC
GTTGGCCACGCGTCCTATTGGTGTGTATATATATGTACTCACGTGGTGCT
TGCCGTAGTCCCGAGACCATTGACCGCGCGCCTCGCTCGAGACGGAGCAG
CACAGGTGGGAGAATGAGAAGGAGGGAGGGAGAGAGAGAGGGAGAATGAG
TGCGTACAGGCGGGGGGTGAGAGGGAGGGGGGGGGGAGGGGGGAGGAAGA
GAGAGGGAGAGAGAGAGAGAGAGAGAGAGAGGGAGAGAGAGTGAGACAGA
CATGGAGAGGGAGAGAGAGGGGGCGGGGGGGGACAGGGACAGACAGAATG
ACAGTGAGGGAGAGAGAGAGAGGGAAAGGGAGACAGAGAGACAGAGACAG
GGAGAGGGAGAGGGGGGGGGAACGAGAGGGAGGGGCAGAGAGAGGGAGAC
AGATAATGGGAGAAGGAGAGAGGGAGGGAGGGAGGCACGCTTGACGTCAA
ACCTACTTTGAACCACACCGCGATTGCTATGTGTACAGTAGTTAGAGTGC
ACATCACATCGCATGGCATCACATGACATCACGTCACGTCGCATCACACT
TCATCGCAACACGAGCACAGAAAAAAACGGGTTTTGTTTCTTCGTCGTCG
TCGTCGTCACGACGAGTCGGTGTTTTGGCAGGGACATCTCAGTCTCACGC
ACGTGCAAATTGTACCTCGTTACATTTTTTGTTTGTTTATAGTAGTATAT
ATATGTATGGCCTCACGTGGTGCTTGCCGTAGTCCCGAGACCATTGACAC
CGCGCCTCGTTCGAGACGGAGCAGTTTATACAATGTATATGAATCATCCA
CAGGGGCATCTACTTCCACGTGTACCAGACAGCCAAGTTTGCCTTCCGGT
GCCAGACTGATAACTACTACTCTAATACCATAGCACTCAATTCTTAAACG
GGATAACCACTGCACAAATTTCCCCTGGCGAGCTACAACACTTGAATAAG
GAAGGGCCACTGCTGAGGTCTCTGGTGACGTGGCCCGCACCTCGCCCCGT
GTTGTTCCTGTTGATACTGTAGAGTAATATGAGAGCACTCAATCTCACAC
GCGTGCGATTGTACCTCGTTCCAAGTAATGTGAATCACCACCGTCGACGA
CGAATCCATGTTTTGGCAGGGGCATCTACTTCCACGTGTACGAGACGGCC
AAGGCGGCCTTCCGGCGGCAGACGGGCGACGAGCACCACCTCCTCTCCGC
CATATCCGCTGGGGCGGTGACGGACGTCGTGACAAACCCCTTCTGGGTGG
TGCGCACGCGCATGCAGACGCAGGTGAGGGGACTGAAAACTGCCGTGATT
CATATGAATTGTAACGAGGTACAATCTCATGTGTGTGAGATTGACTGTTC
TCGTACCACACAAGCCTTTCCCCTGGCGAGCTAAGGAAGGGCCATTGTTG
AGGTCTCTAGTGACGTGGCCCGCACCTCGCCCCGTGTTGTTCCTTAAAAT
ACAGTAGTAGACATGCAGTGTTTCAGGCGTCGGTGACGGACGTCGTGACA
ACCCTGGGTGGTGCGCACGTGCATGCAGACGCAGGTTGGGGCAGTGACGG
AATATCGATCAGTGCAGTAAATAGTTATTGGTCTCGACTGATTTTGTGGG
CGGCGTTCATCACTACTTCGAAGTACTTGGATGCAGTGTCGGTCAACCTA
TCGAATATCGACTATCGATAGATATATAGGTCAGTTGAGTACTGTCGATG
GATAGGTTGATTTGCTTAAATATTCCATCCTTGGGTGGGGGGAACGAAAC
CGCCAAAAGTGTCCCTCCTCGCTCTGTTGTGGATGGCGGCTGACGGCGTG
CATTTATTCCCAGACCGCGGCGGGTGTTTTCAGGTGTCGTTGTTCCGCCT
TTTTGGGGGGGGGTCCCGAGTTGTTATTGTTGGAAAAGTGTACGAGTACA
AGTGGTGCGGTCACGACGACGTGACGTGATGTGATGTGATTTGAAACGCG
TCGGATCACATCGAGGTTGACTTGCCCGCCGACAGACCGACAAGCAAAAT
TCATATATGCTACACTCACGCCAGGTTTTGCGCGTCCTGGAGGAAGGTGG
GGCGGGGCCTGAGCTTATTTACTCATTTATTTGTTTGCAAAAATGGGCAA
CAACATTTATATATACTACTGTACATATCACGCCAGGTTTTGCGCGTCTT
GGAGGAGGGAGGGCGGGATGTGAGCTTATTTATATATTTATTTGCAAAAT
CGGGCAAAATTTATATATATGTACCATCACGCCAGGTTTTGCACGTCCTG
GAGTAGGGGGGGTGGGGCAAACAACAACGACAACTCGGACGCATTTTTTT
GGGAGGGGAGGGGATTTTTTGGGGGTTCGGGGTTGTTGCTGTTGTAACAG
TGTATGAGCGTGAGTGCGCTGTGCTTGCTTACAGCGCAAGCACTACAGTA
CGCCCAGTCCGATGTCTCATGTATGTACCGGCACACTTTTAGGTTTTGCA
CGTCCTGGAGGAGGGGGGGCGGGGCGTGAGCATGTCCATGGTGGAGACAT
TCCGGCACGTGTGGGCCACGGAGGGGATCCGGGCCTTCTACCGCGGGCTC
ACGGCCTCCCTGCTGGGCCTCAGCCACGTCGCCATACAGGTGGGAGATCA
TAATGATGTGATGTGGTGTGATGTGGTTTGTTCTCTAATGTTCAGTGGTT
TGACATCACATCACTCCACATCAAGCCACGTCGCCATACAGGTAAGAGAT
TTCAGCGAGTACTATATATGTATGTATCACGTTGTGCTTGCCGTAGTCCC
GAGGCCATTGACCACGCGCCTCGGTCCAGACGGACCAGTACTACCAGTAC
CAACATAGTGTGCGGCGCAGGCCACGTCACTGAAGACCTCAACAGCGGTA
ATGATGGGGTGGGGTGTGATGTGATGTGTGTACTCACGTCTCTGTGCATG
CCCTAGCCTGAACGATCCTCGTCTTTGCGATGTGATGTCTTGTGATGTGG
TTTGTACTGTAATGTTGAGTAGTTTGACATCGCATCATCATGTGATGTGA
TGTGATGTGATGCGATGTGGTTTGTACTCTAATGCGCAGTAGTTTGACAT
CACATCACATCAAGCTACGTCATTGCCTCTCACGGCCTCCCTGCTGGGCC
TCCGCCACGTCGCCATACAGGTGAGATATAATATTGATGTGATGTGGTGT
GGTGTGATGTGATGTGGTTTGTACTCTAACGTTCAGTAGTTTGACATCAC
ATCACATCAAACCACATCACGGAGGGAGTCAGGGCCTTTTACCGGGGGCT
CACGGCCTCCCTGCTGGGCCTCAGCCACGTCGCCATACAGGTCGGCTAAC
CCTTTTAGCCCTGGGAGGTCGGACTCCCACTGTCAAGCCCTATGATTATA
CGGACCCCAGGGGCAAAAGGGTTAAGAGAAATCGGCGAGTAGTGATGATG
TGATGTGATGTGGTTTGATCTCTAATGTTGAGTAGTTTGACGTCCCATCG
CATAGAACCACGTCACGGAAGAGCTCAACGGTGGAAATGATGTGATGTGA
TGTGATGTGGTTTGTACTCTAATGTTGAGTAGAGTTCGCATCACATCACA
TCACATCACATCACGGTGCCTGCTCCGTCTCGGTCGAGGCTACTCCACAG
GGGTCAATTGTCCCCGGACTATGGCAAGCACTACGTGAGTACCGTAATCG
TCGGAGAGATGTGGCCCCCACGGGACAATTTTCGGGGGAACATTTCTAAG
CGGGAAGGTCCTAAATTGTCCCGAAGACTCTCCGAAACGTTCCCCCAGGT
CCCGAGGGAGATTTTCCGAGTTTTCCCGCGCGAATCCGACCAGTATCCAG
CGAGAAAATTCTCCCGAAAATTGTCATGGGGGGGCAAGATCTCTCTGACG
ATTACGGTAGTGTACAGCATGTGGTCCCGAATACAGTCTCCTACACTAGC
TGGCTGGACAGTTTGAGATGATGTCTCCTAGCTACTCGGGTTCCTTTGAG
ACACATTCTCCTAACTACTTGGGTTCCTTGAAAACCCATTCTCCTAACTA
CTTGGTTTTTTGGAATCGTTCTCCTGACTGCTTGGGTTATTTCAGACACA
TTCCCGTAACCACTTGAGTTTCTGTCTGCGACTTCTGCTGCTCACTCAGT
TCCCCTTGTACGAGAGGCTAAAGGCCGCAGCACGGGAGAGGAACGGGGGA
GGGGGGGAGCGCCCCTCCGACTGGCCTCCGCCGCGTCCAAGGTGGTGGGC
TCCTGCTGGTTTCTTTGAAACTCGTTGTCCTTAGCTACTGTACTTGTACT
TGGTTTCTGTGAAACTCATTCTCCTAGCTACTTGGGTTCTGGGAAACTCA
TTTTCCTAACTACTTGGTTTTTTGAAATCGTTCTCCTAACTACTTGGGTT
CTTCAAGACACATTCTCCTAACTATTTTAGCATTCCGACTAATTGCTCAC
TCGCGTGGCGGTCGCTGCTTACTCAGTTCCCCGTGTACGAGAGGCTAAAG
GCCGTGGCAAGGGAGCGGAACAATGGGGGCGGGGAGCGCCCCTCGGACCT
GATCCTGGCGTCCGCGGCGTCCAAGGTGGTGGGCTCCTGCGTAACCTATC
CGCACGAGGTGCTGCGCGCGCGTATGCAGGTGAGAAAGCGCGGCTGGGGG
AAGGGGAGGGGGGCGGGGAGGAGGAGGAGGAGGAGGAGGAGAAGGACAAG
GAGGCGACGAGAAGAGGGAGGGGGAGGAGGAGGAGGAGGAGGAGGAGGGG
AAGGGGAGGGGGAGGAGGAGAGGAGGAGCAGGAGATAATTCCTACTGATC
GATATTCCATCACTACCCGTGTGCGCGCAGGACGAGCGGGCCAGGCCACG
GTCGCGGCCCAAGGGTCTGGTCAGCACCTTCCAGAGCGTGGTTAGGCTTG
GGGGATATAGAGCTCTGTACACAGGTGAGCTACAAATGAGGGGGACGGGG
AGGGGGAGGGGGAGGAGGAGGAGGAGGTTGTACTTGTTGTTAATTCGTTC
TGATGTGATGTGATGTGATATGTATGTACTCACGTAGTGCTTGCCGTAGT
CCCGAGACCATTGACCGCGTGCCTCGTTCGAGACAGAGCAGGACCCCTCC
CTCCCCTTGGCGAGCTGTGTGTGATGTGATGTGATGTCAAACTACAGCAC
ATTAGAGTTCACATCACATCACATCACATCACATCACATCACATCACACC
GTGCGTACATGTCTGTGTGTCAGCACCTTCCAGATCGTGGTTCGGCTTGG
GGGATATAGAGCTGTGCACAGGCGGGCTACTTGTTAAATTCGTTCTGATG
TGATGTGATGTGATGTGATGTCAAACTACGGTGCATTCGAGTACACATCA
CATCACATCGCATCGCATCACAACGTGCGTGCATTATCTGGTCAGTACAA
GTACCTTCCAGAGTGTGATGCGGCTGGGGGGGTACAGAAGAGCTCTGTAC
ACAGGTGGGCTACTGGTGTTAAATTCGTTCTGATGTGATGTGATGTCAAA
CTACAGTGCCCCCCCACCCATCACATCATGTCGCATCTTCCGCACACACA
CACACACGTACCACGTGGTGCCCCCCTTAAACAGGGGGAATTACTAGTAA
GTGGTGCCCTTTTCCCTTAGTTCGAGGTAGTTAGGGGTAATTACACCTAA
ACTGAAGGCTAATTAGGCCCTAGTTCACCTTCAAGTGCCAACCCTGCCCT
GAAACACACCATCACCTTGGCAGGCTTCCAGCTGAACATGTACCACATGG
TGCCCCCCCTGAAAACACTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTC
TTCTTCTTCTTCTTCTTCTTCTACGCCCCCTTGGCAGGCTTCCAGCTGAA
CATGTTGCGCGTGGTCCCCTCCTGCGTGGCCACCTTTCCTCTCGTACGAG
ATGGTCAGCCCCCCCGTACCGGCCTAAGTCCCCCCCGAACAAACTCCTGC
GGGGGCGGCTTAGTCCTTTGATGACGGCGGGAAAATACCGTGGTGATGTG
AAACATATACCTAGAGTCGGGGCCACCAGTAAGTTCCGAAAAAACTTCAA
CTTCAACGTGCTGACCTTCAACTTGAGATTTGTTCTGAAGGCGGAGGTAC
AAGTTGTTGACGTGATACCTTCAGATGAAGCGACCAATTTTTCGGTGAGT
TGAACAAAACGTTGGGAAAGAGCACACTCAATTGTTTCTCTTAAAGGCCA
AAGGAACTAACTAGTACCACCTACTGTATGTGTGTGCTTCGTCCCGGCCT
AACTGGGATGCGAGTCCATGGCTGAATAGCTACTCATTTTGGACCCCAAA
ACGCACCACCTTGGCAGACTTACAACTGAACATGTTCCGCGTGGTCCCTT
CCTGCGTGGCTACCTTCCTGCGTGGCCACCTTTCCTCTCGTGCGAGATGA
TCACCGCCCCCCCTCCCCCCCTCCCCCTCCCCCTGAAATGCACCACCTTG
GCAGGCTTCCAGCTGAACATGTTCCGCGTGGTCCCTTCCTGCGTGGCTAC
CTTCCTGTCGTACGAGATTATCAGCCGGGAGCTGCGCGCGCGCCTGGGCC
CGAAGGGGGGCGACTTGGCGGCGGTGGCCCCGGACCGGGAGACTTTGGGC
CGCACAAAGACCTCCGCAAACGCCGAGTTCTGATTGAGAGTTCTGACTGA
GAGGTTGGGACCCGAACGTCTTGTACTTCGAAGTAGTTTTTGCGATACGA
CGGACGAACGAGCGGGTGGGAAAGTAGAGACCTGAGTCCCTGCTTACGCT
TGTTTTGTTGTGCGGCACTGGACTTGGCGGTGGCGGTGGCCCCGGACCGA
GACTCTGGGCCGCACCAAGACCTCCGTGAACGCCGAGTTCTGAAGAGTTC
TGGCTGAGAGGTCGCGACCCGAATGTCTTGTACGAAGTAGATTTTTAGCA
AGAAGGCGAACGAGCGAGTGGGAGAGAGACCTTTGCGAACGCTGGGTTCT
GACTGAGCGGTCGGGACCCGAATGTCTTGTAGTTTTTTTGCGAGAATACG
AACGAACGAGCGAGTGGGAAAGAAGAGGCGCCCCTACATACTGTAGAATG
TTTTTGTTGTGTGCGGTGCGTGTTTTGATGTGCGGTACGTGCCCCCGCAC
CTGGGGCGAGGTGAGGTGTGGTCTCTGAACCTGGACACTTTTACAGAGTA
CCGTAATCGGCGGAGAGATATTGCCCCCACGGGCAATTTTCGGGGGAATA
TTTCTGGCCGGGAGGGTCCTGAACTGTCCCGAAAACTCTCCAGTCCCCCC
AGGTCCTGAGGGAGATTTCCCGAGTATTCCCGCGCGAATCCGACCAGTAC
TCGGCGAGAAAAGTTCCCCCGAAGATTGGTATGGGGGGGATGGGGGGGCA
AGATGTCTCCGACGATTACGGCACTTCGTGGGTATGTATGGGTAGCTTAG
GTACATGAGATGGACAGTGTTTTGTTGTGCGGCACGTTGCCCCCCCCACA
GGGCGAGGTCTGGTTGGTCTCATGAAGCTCGAAACTAAATGCAAAGTAAG
CATGGGTAGGTTCTTCAGGCGCACGTTGGCAGCCACTGGGCCGCACCGAG
ACCTCCGCGAACGCCGGATTCTGAGATTGCTGGGAGGTCCCCGAGAGTTT
GTTGTGTGCGGCGGCACG back to topCoding sequence (CDS) from alignment at S-ischiensis_contig82:276144..287361- >mRNA_S-ischiensis_contig82.19917.1 ID=mRNA_S-ischiensis_contig82.19917.1|Name=mRNA_S-ischiensis_contig82.19917.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2094bp|location=Sequence derived from alignment at S-ischiensis_contig82:276144..287361- (Schizocladia ischiensis KU_0333)
ATGGCTACGCCTGGAACGAAACGGCCCCGAACGCCCTCAGCAAAAACTCC
GGTGGACGGCGCGGGCGGCCCGCAGAGCTGGCTGGTGCCCTGCATCCCCG
TATTGTCGGGGGCGGGGGCTGGGGCGATTTGCTCGGTGCTGTGCTCGCCG
CTGGACGTGGCCAAGATCCGTGTCCAAGTGCAGGATGGCTACGCCTGGAA
CGAAACGGCCCCGAACGCCCTCAGCAAAAACTCCGGTGGACGGCGCGGGC
GGCCCGCAGAGCTGGCTGGTGCCCTGCATCCCCGTATTGTCGGGGGCGGG
GGCTGGGGCGATTTGCTCGGTGCTGTGCTCGCCGCTGGACGTGGCCAAGA
TCCGTGTCCAAGTGCAGGATGTTGTCCTGCCCCCTGGCCGGCCGCGCAAG
TATGGAGGCGTTGTCCCGACGCTGAGGACGATCTGGGCGGAGGAGGGGGT
GCTGGGGTGGTACAAGGGTCTCACACCGGCCATGATCTGCATACCTATTT
TCTGATGTTGTCCTGCCCCCTGGCCGGCCGCGCAAGTATGGAGGCGTTGT
CCCGACGCTGAGGACGATCTGGGCGGAGGAGGGGGTGCTGGGGTGGTACA
AGGGTCTCACACCGGCCATGATCTGCATACCTATTTTCTGGGGCATCTAC
TTCCACGTGTACGAGACGGCCAAGGCGGCCTTCCGGCGGCAGACGGGCGA
CGAGCACCACCTCCTCTCCGCCATATCCGCTGGGGCGGTGACGGACGTCG
TGACAAACCCCTTCTGGGTGGTGCGCACGCGCATGCAGACGCAGGGGCAT
CTACTTCCACGTGTACGAGACGGCCAAGGCGGCCTTCCGGCGGCAGACGG
GCGACGAGCACCACCTCCTCTCCGCCATATCCGCTGGGGCGGTGACGGAC
GTCGTGACAAACCCCTTCTGGGTGGTGCGCACGCGCATGCAGACGCAGGT
TTTGCACGTCCTGGAGGAGGGGGGGCGGGGCGTGAGCATGTCCATGGTGG
AGACATTCCGGCACGTGTGGGCCACGGAGGGGATCCGGGCCTTCTACCGC
GGGCTCACGGCCTCCCTGCTGGGCCTCAGCCACGTCGCCATACAGGTTTT
GCACGTCCTGGAGGAGGGGGGGCGGGGCGTGAGCATGTCCATGGTGGAGA
CATTCCGGCACGTGTGGGCCACGGAGGGGATCCGGGCCTTCTACCGCGGG
CTCACGGCCTCCCTGCTGGGCCTCAGCCACGTCGCCATACAGTTCCCCGT
GTACGAGAGGCTAAAGGCCGTGGCAAGGGAGCGGAACAATGGGGGCGGGG
AGCGCCCCTCGGACCTGATCCTGGCGTCCGCGGCGTCCAAGGTGGTGGGC
TCCTGCGTAACCTATCCGCACGAGGTGCTGCGCGCGCGTATGCAGTTCCC
CGTGTACGAGAGGCTAAAGGCCGTGGCAAGGGAGCGGAACAATGGGGGCG
GGGAGCGCCCCTCGGACCTGATCCTGGCGTCCGCGGCGTCCAAGGTGGTG
GGCTCCTGCGTAACCTATCCGCACGAGGTGCTGCGCGCGCGTATGCAGGA
CGAGCGGGCCAGGCCACGGTCGCGGCCCAAGGGTCTGGTCAGCACCTTCC
AGAGCGTGGTTAGGCTTGGGGGATATAGAGCTCTGTACACAGGACGAGCG
GGCCAGGCCACGGTCGCGGCCCAAGGGTCTGGTCAGCACCTTCCAGAGCG
TGGTTAGGCTTGGGGGATATAGAGCTCTGTACACAGGCTTCCAGCTGAAC
ATGTTCCGCGTGGTCCCTTCCTGCGTGGCTACCTTCCTGTCGTACGAGAT
TATCAGCCGGGAGCTGCGCGCGCGCCTGGGCCCGAAGGGGGGCGACTTGG
CGGCGGTGGCCCCGGACCGGGAGACTTTGGGCCGCACAAAGACCTCCGCA
AACGCCGAGTTCTGAGCTTCCAGCTGAACATGTTCCGCGTGGTCCCTTCC
TGCGTGGCTACCTTCCTGTCGTACGAGATTATCAGCCGGGAGCTGCGCGC
GCGCCTGGGCCCGAAGGGGGGCGACTTGGCGGCGGTGGCCCCGGACCGGG
AGACTTTGGGCCGCACAAAGACCTCCGCAAACGCCGAGTTCTGA back to top
|