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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 573 |
| Cds size | 534 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817319.858298-UTR-S-ischiensis_contig82:250686..250723 | 1622817319.858298-UTR-S-ischiensis_contig82:250686..250723 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig82 250687..250723 + |
| 1695741024.0173357-UTR-S-ischiensis_contig82:250686..250723 | 1695741024.0173357-UTR-S-ischiensis_contig82:250686..250723 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig82 250687..250723 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817319.869603-CDS-S-ischiensis_contig82:250723..250949 | 1622817319.869603-CDS-S-ischiensis_contig82:250723..250949 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig82 250724..250949 + |
| 1695741024.0267334-CDS-S-ischiensis_contig82:250723..250949 | 1695741024.0267334-CDS-S-ischiensis_contig82:250723..250949 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig82 250724..250949 + |
| 1622817319.8808224-CDS-S-ischiensis_contig82:252600..252813 | 1622817319.8808224-CDS-S-ischiensis_contig82:252600..252813 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig82 252601..252813 + |
| 1695741024.036182-CDS-S-ischiensis_contig82:252600..252813 | 1695741024.036182-CDS-S-ischiensis_contig82:252600..252813 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig82 252601..252813 + |
| 1622817319.8921106-CDS-S-ischiensis_contig82:255052..255147 | 1622817319.8921106-CDS-S-ischiensis_contig82:255052..255147 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig82 255053..255147 + |
| 1695741024.0479815-CDS-S-ischiensis_contig82:255052..255147 | 1695741024.0479815-CDS-S-ischiensis_contig82:255052..255147 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig82 255053..255147 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig82.19915.1 >prot_S-ischiensis_contig82.19915.1 ID=prot_S-ischiensis_contig82.19915.1|Name=mRNA_S-ischiensis_contig82.19915.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=178bp
MYVIDVPHQGSGVWGGLWADPVEPSVAPFDTLQWPRRFVWGCRCGACAPF
SRAHWSCWCPLRPGNAPPKVSSWQHVGSPRTREACSPGPRCCSPWQTPAN
AWQTPPPREQPHGVSRRSCWPRRTWRRPCCCGRLATMFWSCRSPPPVRPF
LSRAPPPRGAVCPAARNHPLQLRPRSWT back to topmRNA from alignment at S-ischiensis_contig82:250687..255147+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig82.19915.1 ID=mRNA_S-ischiensis_contig82.19915.1|Name=mRNA_S-ischiensis_contig82.19915.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=4461bp|location=Sequence derived from alignment at S-ischiensis_contig82:250687..255147+ (Schizocladia ischiensis KU_0333)
GGGGAGCCGTGGTTTGGAGCCTGCATTGTAGGTTAGTATGTATGTGATCG
ATGTTCCCCACCAGGGTTCGGGAGTTTGGGGTGGCCTTTGGGCTGATCCT
GTCGAGCCTTCCGTTGCACCCTTTGATACATTGCAGTGGCCGCGGCGCTT
CGTGTGGGGTTGTCGCTGTGGGGCATGCGCCCCGTTTTCGAGGGCTCACT
GGAGCTGCTGGTGCCCTCTGCGTCCTGGGAACGCGCCACCGAAGGTGTCT
TCCTGGCAACACGGTGAGCTGTGTGAGGATTTGCTGTGGCAGACACGAGT
GCCAGTAGCGACGAAGTACCCCTTGGCCGGGTGTGCCGGGATGATGCTAT
ACGCAAGAAGCAGGCAGTTTTCTACGTTTTCGATACCAGCTGGTCTCTGG
CGAAGGGGCCACAGACTGGACCCAGTGGTGATGTGTGGGCACTACTCAAG
AGAGCAGTTGCAAGTATGTGCATGTGTGTGTGTGCGCGCGTGCATGTGTG
TGTGTGTATTTTCACGCACGTGCTTAGTGCCTGTGCATATGTGTGTGTGT
GCGTGCGTGCGTACAGGTGTGTGTGTTTGTGTATAACGCGCACCCGTGTG
AGAGCGTGTGTGTGCCTGCCTGTGTGCGTGCACGAGTGTGTGCATGCTTG
GGGGGGCGTGTGCACACGTGTGAAGTATGTGTGTGCTCCACGCCAGCGAA
AACTGCTTGGATTTAGCATGGCCCTTGGTAACTGTACCTGTCTACCCTGT
CTGCACGCTCGGAAGAACTTACTTACTTGGTGGAATGTCGATCAGTAGAT
AGTCAACGGGCTCAGCTGATTTTGTGGGTGGCATTACTAGCTAGCTACTT
GGATTTAGTGTGGGTCAAACTATCGAATATCGACTATTGATAGATATATA
GATCCGTCTCGACCGAGGCGCTTGGTCAATGGTCTCGAGACTACGGCAAG
CACCACATGAGCACATATACGAGGATATATAGATCAGTACTGTCGATAAA
TAGTTTGATTTGCTTAGATATTCCACCACTGGTTGTACGCACTGTTCTAG
CAGGTACTTGTACTGTAGGAGTGACAACACGTGTTTGCATATGAGAACCC
GGTGTGCTCCGTCCCGGCGATGTATGTAGCACGGACGGGACGCGAGGCCG
ATGGCCGAAAGGCTACCCTGCGGGGGGCTGGCCGGCGGTCCAGCAAGTGG
TATGCTGGGCCGAATATGGTCGGCGGTATGCGCAGCACGGGGTGTCCCCT
GTCCTACGTGAGGACACACACACACACACACACTCACACACAAGCGCGCG
CGTGCGCACACACACACACACACACACAACCATGCATGATAACCGTAGGC
CGGGCGAGGCTTAGTTGACCCTTCTGCCCCAGATGTCATGCAACTAGACA
GCTAGGGTGCATGTACACCCTCAAAGAGTTCACGGTCCAAGGGGACCCGG
AACCCTCAAAAGCGGGGTCTGTATTTCCCACTCGTTTCTTTTCTGTCCGC
ACGAAGGGCCCGCTGTTGACGTCAGTTGCGACGTGGACCGCATCTCATGC
TTTTCTGTCTGTTCTCTGATACTTTGTTACCCTCGGTGGCTTTACTGCGC
CTGTTCCATACAAGGCACGTGAACGCTTCCTTTTTCCGATCTGCGAGTAC
GCTGTCGTGCGCACTGTAGTGTAAACATCGCTTATACTAGTAGTGTATAG
CTCTCTGTACTCGTACACGAGTACTCGTATATATATGTGCTCACATTGTG
CTTGGCGTATTCCCGACACCATTGACCATGAGCCTCGATCGAGACGGAGC
ACTACGTACGTACTCGAATACTGTAGTATCTGCAAGTACTGACGAACGAT
CGACAACACTTTTTTGCGTCCCTGTGCGTCGCCCCCCGGGGGCCCGTGTC
CCCCAAACAAAAAGTGGGTTCTCCGCGTACGAGGGAGGCGTGTTCGCCGG
GTCCCCGCTGCTGCTCGCCGTGGCAGACGCCTGCCAACGCCTGGCAAACT
CCTCCTCCTCGGGAGCAGCCGCACGGTGTCTCTCGGCGCTCCTGCTGGCC
GCGGCGGACGTGGCGACGGCCCTGCTGCTGCGGGCGACTTGCCACAATGT
TCTGGAGCTGCAGGAGTCCTCCCCCCGGTGAGTGGGTTTTCATCAGTGAT
GGAATATCGATCAGTAGATACAGTAGTTATCGGGCTCGACTGATTTTGCG
GGTGGCGCTACTAGCTACTTGGATTTAGTGTGTGGCGTTACTAGCTACTT
GGATTTAGTGTGGGCCAAACTATCGAATATCCACTATCGCGACGTGCCGC
AACGTGCTGGAGCTGCAGGAGTCCTCCCCGCGGTGGGTGGGTTTTCATTC
ATGTGAAGGCGTTTACTACAGGCAGTGATGGGATACCGATCAGTGGATAC
TTATCGGGCTCGACTGATTTTTCGACTGATTTTGTGGGCGTCGTTACTAA
CTACTGGGATTTAGTGTGGGTCAGACTATCGAACATCGCCTATTGTGACG
TGCCGCAATGTTCTGGAGCTGAAGGAGTCCTCCCCCCGGTTGTTTTTCAT
TCATGCGAAGGCATTTACTACAGGGCAGTGATGGGTGGCGTTACTAGCTA
CTTGGACACACGCTACCCGTCCCATTCCTCTCCCTCCTCTTCCTGCCCGC
CCGCCCTCCCCCTCCTCGTCCTCCTCCTCCTCCTCCTCCCTGCCCACCTC
CCCCTCCTTCCCTTCTCCCCTTCCCCGCACAAATTTCCCTGGCGAGCTAT
AGGGAAGGGCCACTGCTGAGGTCTCTAGTGACATGGCCCGCACCTCGCCC
CGTGTTGTTCCTGAGAATACTTGGATTTAGTGTGGGTCAGACTATCGAAT
ATCGACTATTGCGACGTGCCGCAACGTGCTGGAGCTGCAGGAGTCCTAGA
GTTCTATATTGACTCCGGAAATCGTCAATATCAACACTCAATATTTTCCA
GTGATTTTCAATCAATGTTCAGTGAATATATTGAACATTGATTGATTTCT
CAAACTGTCAATCAATATTCAATATATTGATATATTGATCAGTACATCGC
CGGTAGCGGCTACCTGGTGGGTGCTTGAAGTACCAATACCGGCTAGCGGG
CGCAAACCAGCGCTACGGTTCAAACCTAAGCCCGGAAGGGGCCGGGGTGG
CCCCACCGAGCAGGCGTTGCTGGTTCACGGGTGCCTTGCCATTGGGCCAC
ACATCGGGCCGGTCCCCCCGGCGGGCAGAAGTATTCGCAGAAGATCGGAT
CTTTCCCGGGTGTGGTCCCAGGTGCCAGGGTGTATCTCGTGTTATTGGTT
AATATGGCCTCCGGCCGGATGCCGTCCTGCCGAGGTCGTATCAGAAGGTT
CCCCCGACCGTTAACGCCGAGCAGCCCCTTCCCGAGGGGTCTGGAACGGT
AGTGAGGCTGTGAATACCGCTACTGGCTACTTGTCAAGCTGAAAAAGTGC
ACGATTTTAAAGGGGAAACATGGATTGATCTGGCGGCCGATCAATATCAA
TATCAATGTTTTTGCAGTATCAATATTTTATCAATGTGATCGACGAATAT
TTGTATCAGTTATGAGCTCTAAGGAGTCCTCCCCCCTGTGGGTTTCATTC
ATGCAAAGGCGTTTACTACTCGTACAGGGCAGTGATGGGACACCGATCAG
TGGATAGGTGTCGGCTCGACTGATTTTTCGACTGATTTTGGGGGCGGCGT
TACTAGCCACTTGGATTTAGTGTTGGTGAAACTATCGAATATCGACTATT
GTAACGTGCCGCAACGTGCTGGAGCTGCAGGAGGCTTCCCCTCAGTGGGT
GGGTTTTCATGCGAAGCAGTGATGGGATATCTAGGCAAATCAACCTATTT
ATCGAAAGTACTGATCTACTTTCCAGTATATGTCTATCGATATTGTAGTC
GGTATTCGATAGTTTGGCCCACACTAAATCCAAGTAGCTAAGCTAGTAAT
GTGCTGGAGCTGCAGGAGTCCTCCCCCCGCTGGGTTTTCATCAGTGATGG
AATGAATTATCGATCTGTAGGAGTTATCAGGCTCGGCTGATTTTGTTGGT
GGCGTTACTACTGTAGCTAGAAGTACTTGGATCAAGCTGTCGAATATCGA
CTATCGATAGATATATAGATCAGCACTGTCGATAAATAGGTTGATTCGCT
TAGATATTCCATCACTGCCGCCCGTCAACGCGTTCCACGCGGACATCGTC
GCCACGGCTTATTTCATGACCTCATCAGTTACGGCCGTCCTTCGATATCC
TGTTTGCCTCCTTACCTACCTCCTGCCCTCGCCCTGTCCCTCCCTCCTTG
CTACCCCCCCTCCCTCCCTCCCTCCCTCTTTGCCCCGCCCCCACCCCGCC
TTTGCTTCCCTGGCAGTGAGGCCCTTCTTGAGTCGTGCACCCCCGCCCCG
GGGGGCTGTGTGCCCAGCGGCCCGAAACCACCCTTTGCAGTTACGGCCAC
GGTCCTGGACC back to topCoding sequence (CDS) from alignment at S-ischiensis_contig82:250687..255147+ >mRNA_S-ischiensis_contig82.19915.1 ID=mRNA_S-ischiensis_contig82.19915.1|Name=mRNA_S-ischiensis_contig82.19915.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1068bp|location=Sequence derived from alignment at S-ischiensis_contig82:250687..255147+ (Schizocladia ischiensis KU_0333)
ATGTATGTGATCGATGTTCCCCACCAGGGTTCGGGAGTTTGGGGTGGCCT
TTGGGCTGATCCTGTCGAGCCTTCCGTTGCACCCTTTGATACATTGCAGT
GGCCGCGGCGCTTCGTGTGGGGTTGTCGCTGTGGGGCATGCGCCCCGTTT
TCGAGGGCTCACTGGAGCTGCTGGTGCCCTCTGCGTCCTGGGAACGCGCC
ACCGAAGGTGTCTTCCTGGCAACACGATGTATGTGATCGATGTTCCCCAC
CAGGGTTCGGGAGTTTGGGGTGGCCTTTGGGCTGATCCTGTCGAGCCTTC
CGTTGCACCCTTTGATACATTGCAGTGGCCGCGGCGCTTCGTGTGGGGTT
GTCGCTGTGGGGCATGCGCCCCGTTTTCGAGGGCTCACTGGAGCTGCTGG
TGCCCTCTGCGTCCTGGGAACGCGCCACCGAAGGTGTCTTCCTGGCAACA
CGTGGGTTCTCCGCGTACGAGGGAGGCGTGTTCGCCGGGTCCCCGCTGCT
GCTCGCCGTGGCAGACGCCTGCCAACGCCTGGCAAACTCCTCCTCCTCGG
GAGCAGCCGCACGGTGTCTCTCGGCGCTCCTGCTGGCCGCGGCGGACGTG
GCGACGGCCCTGCTGCTGCGGGCGACTTGCCACAATGTTCTGGAGCTGCA
GGAGTCCTCCCCCCGTGGGTTCTCCGCGTACGAGGGAGGCGTGTTCGCCG
GGTCCCCGCTGCTGCTCGCCGTGGCAGACGCCTGCCAACGCCTGGCAAAC
TCCTCCTCCTCGGGAGCAGCCGCACGGTGTCTCTCGGCGCTCCTGCTGGC
CGCGGCGGACGTGGCGACGGCCCTGCTGCTGCGGGCGACTTGCCACAATG
TTCTGGAGCTGCAGGAGTCCTCCCCCCGTGAGGCCCTTCTTGAGTCGTGC
ACCCCCGCCCCGGGGGGCTGTGTGCCCAGCGGCCCGAAACCACCCTTTGC
AGTTACGGCCACGGTCCTGGACCTGAGGCCCTTCTTGAGTCGTGCACCCC
CGCCCCGGGGGGCTGTGTGCCCAGCGGCCCGAAACCACCCTTTGCAGTTA
CGGCCACGGTCCTGGACC back to top
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