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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 1228 |
| Cds size | 825 |
| Stop | 1 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817320.4185503-CDS-S-ischiensis_contig82:199426..200251 | 1622817320.4185503-CDS-S-ischiensis_contig82:199426..200251 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig82 199427..200251 + |
| 1695741024.3619366-CDS-S-ischiensis_contig82:199426..200251 | 1695741024.3619366-CDS-S-ischiensis_contig82:199426..200251 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig82 199427..200251 + |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817320.4296863-UTR-S-ischiensis_contig82:200251..200654 | 1622817320.4296863-UTR-S-ischiensis_contig82:200251..200654 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig82 200252..200654 + |
| 1695741024.370098-UTR-S-ischiensis_contig82:200251..200654 | 1695741024.370098-UTR-S-ischiensis_contig82:200251..200654 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig82 200252..200654 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig82.19908.1 >prot_S-ischiensis_contig82.19908.1 ID=prot_S-ischiensis_contig82.19908.1|Name=mRNA_S-ischiensis_contig82.19908.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=275bp
PAPPPAPLPTPPPAPTTQATGTQGGCYAALKPPNKAPHHAPQRKSRVIPG
LFENPPRESRSQDCSCVPHLRCHRRGNHRDVVFPHSPAGPGPGQGARQSD
NLPGPCPGSRPDGTARHWDPSSVSSRPPFLPQLACRSRGCEGLSVAKLGQ
GCKSTRLHRVGQGIAQLRRSDPQCVRNFTTREPCLVSARCLTPGLHTRAR
GALCAGGAVDRVCVPVCERLGHHACPSVRALPYAMACRVEPHLPPMCACM
PVSFKGYRLRGSVDSQPCPPHPGV* back to topmRNA from alignment at S-ischiensis_contig82:199427..200654+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig82.19908.1 ID=mRNA_S-ischiensis_contig82.19908.1|Name=mRNA_S-ischiensis_contig82.19908.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1228bp|location=Sequence derived from alignment at S-ischiensis_contig82:199427..200654+ (Schizocladia ischiensis KU_0333)
CCTGCCCCTCCTCCTGCTCCACTACCAACGCCCCCCCCCGCCCCAACAAC
TCAGGCCACCGGCACCCAGGGGGGGTGCTATGCTGCACTGAAGCCGCCAA
ACAAAGCACCTCATCACGCCCCCCAGCGGAAGAGCAGGGTGATTCCTGGT
CTCTTTGAGAATCCTCCACGGGAGAGCCGTAGCCAGGATTGTTCTTGTGT
TCCTCACTTGCGGTGTCATCGTCGTGGCAATCACCGTGACGTCGTTTTTC
CCCATTCCCCGGCGGGCCCCGGCCCCGGGCAGGGTGCCAGGCAATCCGAC
AACCTTCCCGGCCCTTGCCCAGGCAGTCGCCCAGATGGGACGGCAAGGCA
CTGGGATCCCTCCTCTGTAAGCAGCAGGCCCCCGTTCCTGCCGCAGTTGG
CATGTCGCAGCAGAGGGTGCGAAGGCCTTTCCGTTGCCAAGCTCGGGCAA
GGATGCAAGTCGACCCGTCTTCACCGTGTTGGCCAGGGAATCGCGCAATT
GCGACGGAGTGATCCCCAGTGCGTCCGGAACTTCACGACACGAGAGCCAT
GCCTGGTGTCCGCCCGATGTTTGACGCCGGGGCTGCACACCAGGGCTCGT
GGTGCCCTCTGTGCCGGCGGTGCTGTGGACAGAGTTTGCGTCCCAGTCTG
CGAGCGTTTAGGTCATCACGCTTGCCCGTCCGTTCGGGCCCTCCCGTACG
CCATGGCATGTCGTGTCGAACCGCATTTGCCCCCAATGTGCGCCTGCATG
CCGGTCTCCTTCAAAGGCTACCGTCTTCGCGGGTCAGTCGACTCCCAGCC
GTGCCCCCCGCACCCCGGGGTGTGATTGACGTCAACAATAAAAAAGGTCC
TCGTCGTCCCCGTTGCGCACAAGTTTAATTGGACCACGTCCCCAGGAGAT
CCTTCACGCGGCAGGTGGGCCCCTCGAGCCCGAGGAGGTCCGCTCCTTGT
CATGTGTAAAACCCGGGTTGAAACGCAACGCATCCCGAAACCGCCAACAG
AGAGGCAGCAGGGTCGCGGGTTGTAGGCTGCCCGCCGGGAACCAGCCTAT
CCTACGTGGGGGATGGGTCCAAGAAGCCCCGCAGGGGGAAATTTGGGGCT
CAGAGGGTTCCATCCAAATAGGGGGGATCTGAGCCACAGGGGAGCGGCCC
GGGCAGGGGCAGAACGTCCGTCGTTGCGGGCGAATTCGCCGCCCAAACTT
CTCGCGCTGGGGGCTGTACGGCCCTTCG back to topCoding sequence (CDS) from alignment at S-ischiensis_contig82:199427..200654+ >mRNA_S-ischiensis_contig82.19908.1 ID=mRNA_S-ischiensis_contig82.19908.1|Name=mRNA_S-ischiensis_contig82.19908.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1650bp|location=Sequence derived from alignment at S-ischiensis_contig82:199427..200654+ (Schizocladia ischiensis KU_0333)
CCTGCCCCTCCTCCTGCTCCACTACCAACGCCCCCCCCCGCCCCAACAAC
TCAGGCCACCGGCACCCAGGGGGGGTGCTATGCTGCACTGAAGCCGCCAA
ACAAAGCACCTCATCACGCCCCCCAGCGGAAGAGCAGGGTGATTCCTGGT
CTCTTTGAGAATCCTCCACGGGAGAGCCGTAGCCAGGATTGTTCTTGTGT
TCCTCACTTGCGGTGTCATCGTCGTGGCAATCACCGTGACGTCGTTTTTC
CCCATTCCCCGGCGGGCCCCGGCCCCGGGCAGGGTGCCAGGCAATCCGAC
AACCTTCCCGGCCCTTGCCCAGGCAGTCGCCCAGATGGGACGGCAAGGCA
CTGGGATCCCTCCTCTGTAAGCAGCAGGCCCCCGTTCCTGCCGCAGTTGG
CATGTCGCAGCAGAGGGTGCGAAGGCCTTTCCGTTGCCAAGCTCGGGCAA
GGATGCAAGTCGACCCGTCTTCACCGTGTTGGCCAGGGAATCGCGCAATT
GCGACGGAGTGATCCCCAGTGCGTCCGGAACTTCACGACACGAGAGCCAT
GCCTGGTGTCCGCCCGATGTTTGACGCCGGGGCTGCACACCAGGGCTCGT
GGTGCCCTCTGTGCCGGCGGTGCTGTGGACAGAGTTTGCGTCCCAGTCTG
CGAGCGTTTAGGTCATCACGCTTGCCCGTCCGTTCGGGCCCTCCCGTACG
CCATGGCATGTCGTGTCGAACCGCATTTGCCCCCAATGTGCGCCTGCATG
CCGGTCTCCTTCAAAGGCTACCGTCTTCGCGGGTCAGTCGACTCCCAGCC
GTGCCCCCCGCACCCCGGGGTGTGACCTGCCCCTCCTCCTGCTCCACTAC
CAACGCCCCCCCCCGCCCCAACAACTCAGGCCACCGGCACCCAGGGGGGG
TGCTATGCTGCACTGAAGCCGCCAAACAAAGCACCTCATCACGCCCCCCA
GCGGAAGAGCAGGGTGATTCCTGGTCTCTTTGAGAATCCTCCACGGGAGA
GCCGTAGCCAGGATTGTTCTTGTGTTCCTCACTTGCGGTGTCATCGTCGT
GGCAATCACCGTGACGTCGTTTTTCCCCATTCCCCGGCGGGCCCCGGCCC
CGGGCAGGGTGCCAGGCAATCCGACAACCTTCCCGGCCCTTGCCCAGGCA
GTCGCCCAGATGGGACGGCAAGGCACTGGGATCCCTCCTCTGTAAGCAGC
AGGCCCCCGTTCCTGCCGCAGTTGGCATGTCGCAGCAGAGGGTGCGAAGG
CCTTTCCGTTGCCAAGCTCGGGCAAGGATGCAAGTCGACCCGTCTTCACC
GTGTTGGCCAGGGAATCGCGCAATTGCGACGGAGTGATCCCCAGTGCGTC
CGGAACTTCACGACACGAGAGCCATGCCTGGTGTCCGCCCGATGTTTGAC
GCCGGGGCTGCACACCAGGGCTCGTGGTGCCCTCTGTGCCGGCGGTGCTG
TGGACAGAGTTTGCGTCCCAGTCTGCGAGCGTTTAGGTCATCACGCTTGC
CCGTCCGTTCGGGCCCTCCCGTACGCCATGGCATGTCGTGTCGAACCGCA
TTTGCCCCCAATGTGCGCCTGCATGCCGGTCTCCTTCAAAGGCTACCGTC
TTCGCGGGTCAGTCGACTCCCAGCCGTGCCCCCCGCACCCCGGGGTGTGA back to top
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