mRNA_S-ischiensis_contig81.19874.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig81.19874.1
Unique NamemRNA_S-ischiensis_contig81.19874.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
[Close]
BLAST of mRNA_S-ischiensis_contig81.19874.1 vs. uniprot
Match: D7G7K7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7K7_ECTSI)

HSP 1 Score: 152 bits (385), Expect = 8.380e-42
Identity = 81/151 (53.64%), Postives = 104/151 (68.87%), Query Frame = 3 
Query:   27 KVLDQQLAAEAVVADADLPRLKELWLIEQAKPSPNLDVKFQYAMLLTKSSHRGNNKEGLAMLQDLVHCNYHVEECYYLMALGLYRMQKYEDSRRHCETALRMDPDMAVALSLHHNIKEAIAARDTTVGAVAAAGLAVVGLA--VGVAMSRR 473
            ++LDQQL AEA VA+A  PRL+++WL E  K  PNLD+KFQYA+ L K+     N+EG+++L+ L   +YHV ECYY MAL LYRM +YE+ R   E  LRMDPDM  A +LH  ++EA+A R+ TV  VAA G AV GL   VG  +SRR
Sbjct:    8 ELLDQQLKAEAPVAEASCPRLRDMWLQESNKDEPNLDIKFQYALTLIKTRSHDKNREGMSLLEGLAESSYHVGECYYSMALALYRMGRYEECRSMVEIVLRMDPDMPAAQTLHKAVQEAVARRNETVRNVAAGGAAVAGLGILVGALLSRR 158
[Close]
BLAST of mRNA_S-ischiensis_contig81.19874.1 vs. uniprot
Match: A0A835YNR4_9STRA (Cyclin N-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNR4_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 1.140e-13
Identity = 43/104 (41.35%), Postives = 68/104 (65.38%), Query Frame = 3 
Query:   33 LDQQLAAEAVVADADLPRLKELWLIE-QAKPSPNLDVKFQYAMLLTKSSHRGNNKEGLAMLQDLVHCNYHVEECYYLMALGLYRMQKYEDSRRHCETALRMDPD 341
            LD QL+ E  +A   LP ++++++   +   + +L++KF  ++LL KS+ R +N+EGL +L +LV   YH  +CYY +ALGLYRM ++E+SR  CE  LR   D
Sbjct:   10 LDAQLSHEENLAQDALPNVRKVYVKSLETGDAADLNLKFSLSLLLIKSAKRRDNEEGLELLSELVAAGYHTTDCYYSVALGLYRMGRFEESRTQCEMLLRRIDD 113
[Close]
BLAST of mRNA_S-ischiensis_contig81.19874.1 vs. uniprot
Match: A0A8H7C8P6_AGABI (Mitochondrial fission 1 protein n=1 Tax=Agaricus bisporus var. burnettii TaxID=192524 RepID=A0A8H7C8P6_AGABI)

HSP 1 Score: 58.5 bits (140), Expect = 8.650e-7
Identity = 39/124 (31.45%), Postives = 60/124 (48.39%), Query Frame = 3 
Query:   75 DLPRLKELWLIEQAKPSPNLDVKFQYAMLLTKSSHRGNNKEGLAMLQDLVHCN-YHVEECYYLMALGLYRMQKYEDSRRHCETALRMDPDMAVALSLHHNIKEAIAARDTTVGAVAAAGLAVVG 443
            +L  L+  +  E A+    +  KF YA  L KS       EG+ +LQ++         EC Y +ALG Y++ KYE++ R     L  +P    A SL H I +A+  ++  +G   A G A +G
Sbjct:   19 ELEVLRVQYQKEHAQAHVTIQTKFNYAWGLVKSPKSNEQAEGIELLQEIFRAEPTRRRECLYYLALGYYKLGKYEEANRFNALLLEKEPSNMQAQSLSHLIDQAVT-KEGYIGMALAGGAAALG 141
[Close]
BLAST of mRNA_S-ischiensis_contig81.19874.1 vs. uniprot
Match: A0A6V1P2L8_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P2L8_HETAK)

HSP 1 Score: 53.5 bits (127), Expect = 6.780e-5
Identity = 47/156 (30.13%), Postives = 72/156 (46.15%), Query Frame = 3 
Query:   39 QQLAAEAVVADADLPRLKELWLIEQAKPSPNLDVKFQYAMLLTKSSHRGNNKEGLAMLQDLVHCN-----------YHVEECYYLMALGLYRMQKYEDSRRHCETALRMDPDMAVALSLHHNIKEAIAA---RDTTV---GAVAAAGLAVVGLAVG 455
            Q L  EA     ++  ++  +  EQ  P P+LD+KF YA +++KS  R     G+ +L +L+              +   EC+  +A       +    R H E ALR+ PD   A  LH +++E   A   RD  +   G   AAG  V+GLA+G
Sbjct:   11 QLLEEEAAAIAENIEEVEVKYRDEQTDP-PDLDLKFHYAWVMSKSHERSRRDFGIQLLNELLAAGRGXXXXXXXXXHRPFECHLALAQAHLLAHRPAQGRPHAEMALRIRPDDVAAQKLHFHLRERAQADKLRDVGLLAGGVALAAG--VLGLAIG 163
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig81.19874.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G7K7_ECTSI8.380e-4253.64Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YNR4_9STRA1.140e-1341.35Cyclin N-terminal domain-containing protein n=1 Ta... [more]
A0A8H7C8P6_AGABI8.650e-731.45Mitochondrial fission 1 protein n=1 Tax=Agaricus b... [more]
A0A6V1P2L8_HETAK6.780e-530.13Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig81contigS-ischiensis_contig81:257038..262996 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score152.5
Seed ortholog evalue1.6e-34
Seed eggNOG ortholog2880.D7G7K7
Preferred nameFIS1
KEGG koko:K11982,ko:K17969
KEGG Pathwayko04137,ko04139,map04137,map04139
GOsGO:0000266,GO:0000422,GO:0001101,GO:0001300,GO:0001666,GO:0001678,GO:0001836,GO:0003674,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005777,GO:0005778,GO:0005779,GO:0006605,GO:0006626,GO:0006810,GO:0006839,GO:0006873,GO:0006874,GO:0006875,GO:0006886,GO:0006914,GO:0006915,GO:0006950,GO:0006996,GO:0007005,GO:0007031,GO:0007154,GO:0007165,GO:0007204,GO:0007568,GO:0007569,GO:0008053,GO:0008104,GO:0008150,GO:0008152,GO:0008219,GO:0008637,GO:0009056,GO:0009507,GO:0009536,GO:0009605,GO:0009628,GO:0009636,GO:0009653,GO:0009719,GO:0009743,GO:0009746,GO:0009749,GO:0009893,GO:0009966,GO:0009967,GO:0009987,GO:0009991,GO:0010033,GO:0010035,GO:0010243,GO:0010604,GO:0010638,GO:0010646,GO:0010647,GO:0010821,GO:0010822,GO:0010941,GO:0010942,GO:0010950,GO:0010952,GO:0012501,GO:0014070,GO:0014823,GO:0014850,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0016559,GO:0019222,GO:0019722,GO:0019725,GO:0019867,GO:0019932,GO:0022411,GO:0022603,GO:0022607,GO:0023051,GO:0023052,GO:0023056,GO:0030003,GO:0030162,GO:0031090,GO:0031224,GO:0031231,GO:0031300,GO:0031301,GO:0031306,GO:0031307,GO:0031323,GO:0031325,GO:0031667,GO:0031903,GO:0031966,GO:0031967,GO:0031968,GO:0031975,GO:0032268,GO:0032270,GO:0032386,GO:0032388,GO:0032469,GO:0032471,GO:0032502,GO:0032592,GO:0032879,GO:0032880,GO:0032989,GO:0032990,GO:0032991,GO:0033036,GO:0033043,GO:0033157,GO:0033365,GO:0033500,GO:0033993,GO:0034284,GO:0034613,GO:0035556,GO:0035584,GO:0036293,GO:0042221,GO:0042579,GO:0042592,GO:0042593,GO:0042886,GO:0042981,GO:0043065,GO:0043067,GO:0043068,GO:0043085,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043280,GO:0043281,GO:0043523,GO:0043525,GO:0043653,GO:0043933,GO:0044085,GO:0044093,GO:0044237,GO:0044248,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0044877,GO:0045184,GO:0045862,GO:0046907,GO:0048284,GO:0048285,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0048856,GO:0048869,GO:0048878,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050801,GO:0050896,GO:0051049,GO:0051050,GO:0051094,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051179,GO:0051222,GO:0051223,GO:0051234,GO:0051246,GO:0051247,GO:0051259,GO:0051260,GO:0051336,GO:0051345,GO:0051480,GO:0051560,GO:0051561,GO:0051641,GO:0051649,GO:0051716,GO:0052547,GO:0052548,GO:0055065,GO:0055074,GO:0055080,GO:0055082,GO:0060255,GO:0060341,GO:0061024,GO:0061025,GO:0061726,GO:0061919,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070201,GO:0070482,GO:0070584,GO:0070585,GO:0070727,GO:0070887,GO:0071310,GO:0071322,GO:0071326,GO:0071331,GO:0071333,GO:0071396,GO:0071407,GO:0071417,GO:0071495,GO:0071702,GO:0071705,GO:0071840,GO:0072503,GO:0072507,GO:0072594,GO:0072655,GO:0080090,GO:0090087,GO:0090140,GO:0090141,GO:0090313,GO:0090314,GO:0090316,GO:0097190,GO:0097237,GO:0098573,GO:0098588,GO:0098771,GO:0098805,GO:1901214,GO:1901216,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902531,GO:1902533,GO:1902617,GO:1903008,GO:1903533,GO:1903827,GO:1903829,GO:1904578,GO:1904579,GO:1904951,GO:1905395,GO:1905475,GO:1905477,GO:1990910,GO:2000116,GO:2001056,GO:2001233,GO:2001235,GO:2001242,GO:2001244
EggNOG free text desc.mitochondrial fission
EggNOG OGsKOG3364@1,KOG3364@2759
EC2.3.2.27
COG Functional cat.A
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03029,ko04121,ko04131
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionTetratricopeptide-like helical domain
Ec32 orthologEc-22_002050.1
Exons5
Model size1088
Cds size456
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817313.128041-UTR-S-ischiensis_contig81:257037..2576461622817313.128041-UTR-S-ischiensis_contig81:257037..257646Schizocladia ischiensis KU_0333UTRS-ischiensis_contig81 257038..257646 -
1695741018.471496-UTR-S-ischiensis_contig81:257037..2576461695741018.471496-UTR-S-ischiensis_contig81:257037..257646Schizocladia ischiensis KU_0333UTRS-ischiensis_contig81 257038..257646 -
1622817313.2001486-UTR-S-ischiensis_contig81:262973..2629961622817313.2001486-UTR-S-ischiensis_contig81:262973..262996Schizocladia ischiensis KU_0333UTRS-ischiensis_contig81 262974..262996 -
1695741018.539882-UTR-S-ischiensis_contig81:262973..2629961695741018.539882-UTR-S-ischiensis_contig81:262973..262996Schizocladia ischiensis KU_0333UTRS-ischiensis_contig81 262974..262996 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817313.1394572-CDS-S-ischiensis_contig81:257646..2577291622817313.1394572-CDS-S-ischiensis_contig81:257646..257729Schizocladia ischiensis KU_0333CDSS-ischiensis_contig81 257647..257729 -
1695741018.483506-CDS-S-ischiensis_contig81:257646..2577291695741018.483506-CDS-S-ischiensis_contig81:257646..257729Schizocladia ischiensis KU_0333CDSS-ischiensis_contig81 257647..257729 -
1622817313.1500242-CDS-S-ischiensis_contig81:260091..2602071622817313.1500242-CDS-S-ischiensis_contig81:260091..260207Schizocladia ischiensis KU_0333CDSS-ischiensis_contig81 260092..260207 -
1695741018.4933524-CDS-S-ischiensis_contig81:260091..2602071695741018.4933524-CDS-S-ischiensis_contig81:260091..260207Schizocladia ischiensis KU_0333CDSS-ischiensis_contig81 260092..260207 -
1622817313.16069-CDS-S-ischiensis_contig81:261217..2612811622817313.16069-CDS-S-ischiensis_contig81:261217..261281Schizocladia ischiensis KU_0333CDSS-ischiensis_contig81 261218..261281 -
1695741018.5029163-CDS-S-ischiensis_contig81:261217..2612811695741018.5029163-CDS-S-ischiensis_contig81:261217..261281Schizocladia ischiensis KU_0333CDSS-ischiensis_contig81 261218..261281 -
1622817313.1751623-CDS-S-ischiensis_contig81:262603..2627361622817313.1751623-CDS-S-ischiensis_contig81:262603..262736Schizocladia ischiensis KU_0333CDSS-ischiensis_contig81 262604..262736 -
1695741018.5142055-CDS-S-ischiensis_contig81:262603..2627361695741018.5142055-CDS-S-ischiensis_contig81:262603..262736Schizocladia ischiensis KU_0333CDSS-ischiensis_contig81 262604..262736 -
1622817313.189009-CDS-S-ischiensis_contig81:262913..2629731622817313.189009-CDS-S-ischiensis_contig81:262913..262973Schizocladia ischiensis KU_0333CDSS-ischiensis_contig81 262914..262973 -
1695741018.5251412-CDS-S-ischiensis_contig81:262913..2629731695741018.5251412-CDS-S-ischiensis_contig81:262913..262973Schizocladia ischiensis KU_0333CDSS-ischiensis_contig81 262914..262973 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig81.19874.1prot_S-ischiensis_contig81.19874.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig81 257647..262973 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig81.19874.1

>prot_S-ischiensis_contig81.19874.1 ID=prot_S-ischiensis_contig81.19874.1|Name=mRNA_S-ischiensis_contig81.19874.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=152bp
MKVLDQQLAAEAVVADADLPRLKELWLIEQAKPSPNLDVKFQYAMLLTKS
SHRGNNKEGLAMLQDLVHCNYHVEECYYLMALGLYRMQKYEDSRRHCETA
LRMDPDMAVALSLHHNIKEAIAARDTTVGAVAAAGLAVVGLAVGVAMSRR
R*
back to top

mRNA from alignment at S-ischiensis_contig81:257038..262996-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig81.19874.1 ID=mRNA_S-ischiensis_contig81.19874.1|Name=mRNA_S-ischiensis_contig81.19874.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=5959bp|location=Sequence derived from alignment at S-ischiensis_contig81:257038..262996- (Schizocladia ischiensis KU_0333)
GTCGGGGGGCGTGGGTAGCAGCCATGAAGGTCTTGGATCAGCAGCTGGCT
GCGGAAGCTGTGGTGGCCGATGCAGATCTCCCGGTGCGTTGCTGCCGTTA
CGCTCTATTGCTTGCTGCGGGCAACACGGATAACCGTTCGCCACGTACAA
CAACATGCCTCGAGAACACGCGGGCCATCCGCGCTTGTCCGCTGACCATC
CGCGCTTATCCGCTCCACTGCCCACGCCGCGCTCCTCAAACCCGCATACG
CGCTCGGCAGAGGCTAAAAGAGCTCTGGCTCATCGAACAGGCCAAGCCCA
GCCCCAACCTCGACGTGAAGTTCCAGTACGCCATGCTTCTCACTAAGAGC
TCCCACAGAGGAAACAACAAGGAGGGCCTTGCCATGTTGCAAGGTAAGCT
TCTCGGCTCGAGCTCCGCGGCAGGGCTGGGCGACCGGACGGTAGAGACCG
CGCTATTCCCTGCGTGTAGCTCCGTCTGGAGCGCCAGTACCCAGTGGTGG
AACATCTAAGCAAATCAACATATTCATCGAGAGTACTGATGTACAGTATA
TATCTATCGATAGTCGATATTCGATAGTTTGACCCGCACTAAATACAATT
AGTTGCTGTAGTAGTGCCACCCACAAAATCAGTCCAGCCCGAAAACTGTC
GATTGATCGATATTCCATCACTGACCTCTGCCGGGGAGTCAAAGCTGTTG
CGCAGGGTTGGCGCTTAACCCTGGGTGGTGCCCTTCTAGGCCCTCAACTA
GAGGTAGTTAGGGCTAATTAGACCTAAAATGAAGGCTAATTAGGCCCTAG
TTAACCTTTGAGTGCCAACCCTGCAGCTGCGGACATTTGGCGAGTCCAAA
CCGATTGCTCATAGCAGGCTTTGGTTTGGCACCGAGGTGACTGAGGGGGC
AGGGGAGCGCCGAGGCCTCACCCTCGCTTTCTGGGACAAGTGCCTCCCAC
GGTCAGTCGCCTCTGTGGCGGGCTACTTAAGGCAAGCAGAGCATGAGTAC
ACTACGCTCAAATTTCCCCTGGCGAGCTATAGGGAAGGGCCACTGCTCAG
GTCTGTAGGGATGTGGCCTGCACCTCGCCCTGCGTTGTTCATGATAGTAC
TTCAAGGCATGTGCTCGTGATTCGTGTACATATACGGTCTCCTCCGCACG
CTGCGCCATGCCCAATCTCCTAACTACTGGGCGATTGAACACCAATCTCC
TTAACTACTGTACTTGGCCGATTGAACACCAATCTCCTTCATTACTTCAA
AGAATGTAGTCGTGATTCCGGTACATATATTGTCTCCTCCGCACGCTGTG
CGTGCTCAATCTCCCAACTACTTGGTGAATGAGAACCAGTATCTTTCACT
ACTTCAAAGCTCGTGCTCATGAATCACGGACTTACATATATATGTCTGCT
CCGCACGCTGTGCGTGCTCATCGCACGGCGGCCATGGGCCCTCGCCTCTA
TGCATGTGCAATACAGACTGCCGCCACTGAAAATACAGTTGCTGAGTACT
GCAGTGCCACACGTGAGTGCACTGCACAAATTCAAAGCTATAATGAGCTC
AATATTCTCCGTCTCGATCGAGGCGCTCTAGTGGTCAATGGTCTCGGGAC
TACGGCAAGCACGGCGCGAGTACATATATATATATATATATATATATATA
TATATATATATATATATAGTGAGCCCCATTGTCACCCCCCCGGCCCCCTC
CTCACGCTGAAATAGACCTGGTTCACTGCAACTACCACGTGGAGGAGTGC
TACTACCTTATGGCACTAGGCTTGTACAGGTGAGCACTACTTACTTCGAA
GTGCAATGCATGTCTACTACAGTACCTCATGGCACTAGGCTTGTACAGGT
GAGCACTACTGTAAGTACAATGCATGACTACTACCTCCTGGAACTAGGAT
TGTACTGTAAGTACAATGCATGACTACTACCTCATGTCACTAGGATTGTA
CACGTAGGCACTAAGTATAATGCATGACTACTACCTCATGGCACTAGGGT
TGTACAGGGTGAGCACTACAGTACTTTAAACGCATGGCTCTACAGTACCT
CATGGCACTAGGCTTGTAGAGCTGAGCACTACTTACAATGCGTGACTACT
ACCTCATGGCACTAGGCTTGTACAGGTGAGCGGTGATTCATATATACTGT
AGCGAGGTACAATCGCACATGTGCGAGACTGAGTGTTCTCGTACTAGTGG
TTGTCCCGTTTAAGAATTGAGTTTTCTCGTACTAGTGGTTATCACATCGA
AGAATTTAAAACCAAAAGCGCTGTCCTGAGGATGCAGAAGTGCGAGGAAA
GCCGCCGACACTGCGAGGTACTGTACTGTACTGTACCGAGCCATACTACA
CTGTACTCTACTGCACTCTACGATACTGTACTGCTGCACATGCTGTGATT
TATATCAATTGCAACGAGGTACAACCGCACGTGTGCGAGATTTGAGTGTT
TCGTACTAGCGGTTGTCCCATTTAAGAATTGAGTGTGCTCGCAGTAGTTG
TCATCACATCGAAGACCTAAACACCAAAATGCTGCCCTCAGGATGCAAGA
GTACGAGGAAAGCCGTCGACACTGCGAGGCTACTGCACTGTACCGAGCCA
TACTGCACTGCTCTCGTATTGTTGGTTGTCACATCAAAGAGCTAAATGCG
AGAAATGCTGTCCTCAGGATGCAGGAGTACGATGAAAGCCGTAGACACTG
CGAGACGGTGCACTGCACTGCACTGTGCTTTACCGAGCCATACTGCACTG
TACTGTACTGTACTGCACTGCTGCACACGCTGTCCTCAGGATGCAGAAGT
ACGAGGACAGCCGTCGACACTGCGAAACGGCACTCCGCATGGATCCGGAC
ATGGCCGTGGCATTGTCCCTGCACCACAACATCAAGGAGGCCATCGCTGC
AAGAGGTGATGTGATGTGATGTGGCGATGTGATGTGATGTGGTGTAATGT
ACCGATGTGAGATGTGATGCGATGTGATGCAGCATGTTGTGATGTGATGC
AATGTGATGTGGTGGTGTGATGTGATGTAATGTGGTGATGTGGTGTGAGG
TGAGGTGATGTGATGTGATGTGATGCCTTGTCCCTGCACCACAACATTAA
GGAGGCCATCGCTGCAAGAGGTGATACATATCAATTGTAACGAGGTACAA
TCGCACGCGTGTGAGATTGACTGTTCTCGTATTAGTAGTTGTCCCATTTA
AGCTTTGAGTGTTCTCGAATTAATGAGTATCACATCAAGGAACTGAAAAC
AAGGAGGGGGTTGCTGTCGTGTACCGTGATGTGAAATGTGGCGCAATGTA
TACTGACAAGTACATACTTGTCGTAATCGTCGGATTGCCCCCACGGGGCA
ATGTTCGGGGGAATATTTCTAGCCGGGAAGGTCCTGAATTGTCCCGAACA
CTCTCTAAAGGTTTCCCCAGGTCCTGAGGCAGATTTCTCGAGTTTTCCTG
CGTGAATCCGACCAGTATTCGGCGAGGAAAGTTCCCCCGAAAATTGGCAT
GGGGGGGCAAGATTTCTCCGACGATTACGGTATTTCCGTCGTACGCAAAC
CCCAAGACGAGCTCACGACAGTCCAAGTATGCTAGTCCAAGTATGTACGG
GTTTGCCAAGTATAGTTCTGCTCCGTCTCCATTGAGGCGCGTGGTCAATA
GGCTCGTGAACGTGAGTACGAGTACACACACACACACACACACACACACA
CACACACATATACATATGAGTACCTACTCGTACTGCGCTTGGTATGCTCC
GTCCCGGCAAAGCAGGGACCCGAGCCCAGGCCAATTGCCGAAAGGCTGCC
CTGCGGGGGCTGGCCGGCGGTCCAGCAAGTAGTATGCTACTGTGATATCA
TGTGATGTGATATGTACTCTATCGTACAGTAGTTTGACATCACATCACAT
CACATCACATCAGTGGCCGGCGATCCAGCAAATGAGTGTGCTGGGTGATG
TAGACGGGCGGTGGGAGGCACGGGACGGGGTGTAATAGCAACCCTGTCCG
ACGTGCGTACACGCAGTACTGCAGCTGTGCGCAGCAAGGAGAGCGAGCAC
TGCAGACACTTCCGGAAGGTTGTACCATGCGCAGCAATAATGACTAAGTA
CCTCGAAGTACTGACTACTGGCTACTGACTACGGCAGGGTTTGCAGATAC
TATGCAGGCGGTAGAGTAAGCACTGCTGACACGCCCGGAAGTTTGCACTC
CACAGCAGTAGCAAGCACTACAGTACCTCGAGGTACTGGCTACTGACTGT
GGTACTTAGGGTTTGTTGATACTATGCGGGCAGTAGAGTAGGCACTGCCG
ACACTTCCGGAAGTTTGTACCGCAGCAATAAGGACTAAGTGCCTCGAAGC
ACTGACTACTGGCTATGGTAGGGTTTGCTGATGCTATGCCGACAGTAGAG
CGAGCACTGCTGACACACCCGGAAGTTTACACTCCGCAGCAGTCGTAAGC
ACTACAGTACTTCGAAGTACTGACTACTGACTATCATGGTAGGTTTTGCT
GATACTATGCAGGCGGCAAGTATATAAAGCACTGCTGACACTCTCGGACG
CGCAACACTCCAGGGTGACGGCGCCGATATTGTAGCTCCTCTTCTTTCAC
ACTCACTTGTTTGTCTCCTTGGAAGAGAAATATCTCTGCACCCCCCCACC
CACTCGGGTACTGCCTGGGGATCACCCGTCGGGCGGGCGGGCTGGTGTCT
GGCAGTGATGGAACATATAAGCAAATCAACCTGTTTATCGACAGTACTGA
TCTATTCTGAGTGGTAGATAGGCGACGAGCTCCAGGCCCCGTGCCAAAAG
GCTCGTCCCGAAACGGGACTCAACGAAGCCCTTCTTCCCCTCGCAGGGCA
AGAAGAAAAGAAAAAATAAAGGAAGGGGCGGGGTGATGAGGAAAGGGAAG
AGGCGCAGGGAAGTCTCTTGTGCTCACAGTGGGGCATGCGGGCAGGGCAG
GCGGGGGCGAAGCCGCACACGGTATCTATCGATAGTTGATATTCGACGGT
TTGGCCCAGGCTATATACAAGTAGTTTTTGGCATGAAGATAGAAAGCGCG
TGGAAAAGAGGAGGTGTTCCTACCCTTGGTACCGCCACCCACAACCGCGG
AAAAAGTAGGACCACCTGTATTTTCCACTGCGCTTCTTGTCCTTCCGCGC
AAAAAAACAGTCGAGCCCGATAACTGATCACTGATCGATATTCCATCGCT
GGTGTCTGTGTGTTGTACCTGCGGAAAAATACCAACCTGGACCGGGCTGC
TGGGCCTGCACCGGCAGACACGACGGTGGGGGCGGTGGCGGCGGCAGGCC
TCGCCGTGGTTGGCCTGGCAGTGGGGGTGGCCATGTCCCGCAGGCGGTGA
TGGGACGTGACGTGACGTGATGTGATGTCAAGCTCCTCTGTTTCAGAGTC
GTACACATCACGTCACCTCACGTCGCGGCAGACGGTGATGGGGTGTGGCG
TGACGCGATGTGATGTGATGTCAAGCTCCTCTGTTTCAGAGTCGTACACA
TCACGTCACCTCACATCGCGGCCGACGGCGATTGGGTGTGACGTGACGTG
TTGTGATGTGATGTCAAGCTCCTTTGAACCAGAGCACACGTCACACGACA
TCACACCACGTCACGTCACGTCACATCACGGCACGGCACGGCACGGCACG
GCATCAATGGCGTGTCGGGCACTGTGACAGTGTCGGTCGACTTGGGTCGT
GTTTTGCCCCACCCATCGTATGTATGTACTCATGTTGTGCTTGCCACAGT
CTCGAGACCATTGACCACGCGCCTCGATATGAGACAGAGCAGTAGAGGAT
GTGCAATCGACTTTTTGCCAGTGTACATTTAGTTCTGATGTATGAGTAGT
GCCTTATTCCATGTATTCTACAAGTTTGATGTGATAGCCAGTACGGTAGT
ACGAGAACGCACAATTCTTAAATGGGATAATCAACACTAATACGAGAAAA
CGCAATCTC
back to top

Coding sequence (CDS) from alignment at S-ischiensis_contig81:257038..262996-

>mRNA_S-ischiensis_contig81.19874.1 ID=mRNA_S-ischiensis_contig81.19874.1|Name=mRNA_S-ischiensis_contig81.19874.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=912bp|location=Sequence derived from alignment at S-ischiensis_contig81:257038..262996- (Schizocladia ischiensis KU_0333)
ATGAAGGTCTTGGATCAGCAGCTGGCTGCGGAAGCTGTGGTGGCCGATGC
AGATCTCCCGATGAAGGTCTTGGATCAGCAGCTGGCTGCGGAAGCTGTGG
TGGCCGATGCAGATCTCCCGAGGCTAAAAGAGCTCTGGCTCATCGAACAG
GCCAAGCCCAGCCCCAACCTCGACGTGAAGTTCCAGTACGCCATGCTTCT
CACTAAGAGCTCCCACAGAGGAAACAACAAGGAGGGCCTTGCCATGTTGC
AAGAGGCTAAAAGAGCTCTGGCTCATCGAACAGGCCAAGCCCAGCCCCAA
CCTCGACGTGAAGTTCCAGTACGCCATGCTTCTCACTAAGAGCTCCCACA
GAGGAAACAACAAGGAGGGCCTTGCCATGTTGCAAGACCTGGTTCACTGC
AACTACCACGTGGAGGAGTGCTACTACCTTATGGCACTAGGCTTGTACAG
ACCTGGTTCACTGCAACTACCACGTGGAGGAGTGCTACTACCTTATGGCA
CTAGGCTTGTACAGGATGCAGAAGTACGAGGACAGCCGTCGACACTGCGA
AACGGCACTCCGCATGGATCCGGACATGGCCGTGGCATTGTCCCTGCACC
ACAACATCAAGGAGGCCATCGCTGCAAGAGGATGCAGAAGTACGAGGACA
GCCGTCGACACTGCGAAACGGCACTCCGCATGGATCCGGACATGGCCGTG
GCATTGTCCCTGCACCACAACATCAAGGAGGCCATCGCTGCAAGAGACAC
GACGGTGGGGGCGGTGGCGGCGGCAGGCCTCGCCGTGGTTGGCCTGGCAG
TGGGGGTGGCCATGTCCCGCAGGCGGTGAACACGACGGTGGGGGCGGTGG
CGGCGGCAGGCCTCGCCGTGGTTGGCCTGGCAGTGGGGGTGGCCATGTCC
CGCAGGCGGTGA
back to top