mRNA_S-ischiensis_contig81.19865.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig81.19865.1
Unique NamemRNA_S-ischiensis_contig81.19865.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
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BLAST of mRNA_S-ischiensis_contig81.19865.1 vs. uniprot
Match: A0A835ZEI4_9STRA (Low-co2 inducible protein lcib n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEI4_9STRA)

HSP 1 Score: 191 bits (485), Expect = 6.150e-57
Identity = 103/235 (43.83%), Postives = 143/235 (60.85%), Query Frame = 1 
Query:   16 FLASAVTALAEQGFSGDTAIACVSVCRDERCGTFLSVLRELVGPVFDMRSLGGFITCGKTGFGAAHAHAPISSDGRERYVYFCAPHIAIDKDGAVAPVERPGRERMSTACGALCALKGQLEQGPLDITPDVDDLEMSIIKQVAPHLARRTSEDGPLDLAGITKLAEQVIV-EQLEGLVSATVDTTQADYAIVAGIQVHGPE-GKDYFYPCYRHCVTCVEGVREPLVIVPLEHLKQ 714
            F  S    L + GF  ++ IAC+ +CRDE CG  +   +   G +F  R LGGFI CGKTGF AAHAH+P++ DGRE+Y+Y  APHI I  DG +   +R GR   S ACGAL A    L +G +D    +DD+EMS++ Q+   L +        D   +TK+A +VI+ +QLE ++  TVDT++ADYA+VAGIQ+HGP     +F P  +HC   V+G R   V +P+  LK+
Sbjct:    4 FFDSCEVELDKLGFRDESTIACIGICRDEICGALVEETKARFGDLFVFRGLGGFIFCGKTGFRAAHAHSPLNEDGREKYLYIVAPHIGISADGTLGTCDRKGRGGTSHACGALHAFHQMLRKGHVDTRLAMDDIEMSVMSQL---LIQDIEWGSVPDFGELTKIAARVIIRKQLEEIIRETVDTSRADYAVVAGIQIHGPGYHHSFFMPMQKHCYAVVKGKR---VALPVTELKR 232
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BLAST of mRNA_S-ischiensis_contig81.19865.1 vs. uniprot
Match: A0A836CPA8_9STRA (LCIB_C_CA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPA8_9STRA)

HSP 1 Score: 184 bits (466), Expect = 3.500e-53
Identity = 105/230 (45.65%), Postives = 140/230 (60.87%), Query Frame = 1 
Query:    7 EEYFLASAVTALAEQGFSGDTAIACVSVCRDERCGTFLSVLRELVGPVFDMRSLGGFITCGKTGFGAAHAHAPISSD-GRERYVYFCAPHIAIDKDGAVAPVERPGRE-RMSTACGALCALKGQLEQGPLDITPDVDDLEMSIIKQVAPHLARRTSEDGPLDLAGITKLAEQVIVE-QLEGLVSATVDTTQADYAIVAGIQVHGPE-GKDYFYPCYRHCVTCVEGVREPL 684
            E  F    V AL   GF  D  IAC+ VCRDE CGT +  +++  G +F  R L GFI CGKTG  AAHAH+PI ++ GRE+Y+Y  A HI +  DG +  V+R GR    S ACGAL      L +G +D    +DD+EMS++ Q+  H  +  +     D+A +TKLA +VIV+ QLE ++  TVDT +ADYAI+AG+Q+HGP   ++YFYP    C   VEG R  L
Sbjct:   71 ESLFWDCCVEALETHGFKDDNTIACIGVCRDEICGTLMDEVKKRFGDLFIFRGLAGFIFCGKTGLKAAHAHSPICNETGREKYLYVVAAHIGVSADGTLGRVDRRGRGGEASYACGALAYFHSMLVKGQVDTRLAMDDIEMSVMSQLLIHNIKWGTVP---DMAELTKLASRVIVQSQLEEIIRETVDTRKADYAIIAGVQIHGPGFQQNYFYPMDDLCYGMVEGKRVTL 297
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BLAST of mRNA_S-ischiensis_contig81.19865.1 vs. uniprot
Match: A0A1W1I999_9BACT (Low-co2 inducible protein lcib n=1 Tax=Nitrospira japonica TaxID=1325564 RepID=A0A1W1I999_9BACT)

HSP 1 Score: 176 bits (446), Expect = 2.390e-51
Identity = 95/216 (43.98%), Postives = 129/216 (59.72%), Query Frame = 1 
Query:    7 EEYFLASAVTALAEQGFSGDTAIACVSVCRDERCGTFLSVLRELVGPVFDMRSLGGFITCGKTGFGAAHAHAPISSDGRERYVYFCAPHIAIDKDGAVAPVERPGRERMSTACGALCALKGQLEQGPLDITPDVDDLEMSIIKQVAPHLARRTSEDGPLDLAGITKLAEQVIVEQLEGLVSATVDTTQADYAIVAGIQVHGPEGKDYFYPCYRHCV 654
            ++ F+A +  AL   GF  +  IA  SVCRDE   + +  + +  G VF   SLGG +T GKTGF AA  HAPI   GRERY Y+  PHIAID  G      RPGR+++S ACGAL A   +L  G L++  D DDLE SI+KQ   HL R+       +L  +T++A  VIVE+LE ++  TVD  ++DY +  GIQ+H PEG+ + +P   + V
Sbjct:   17 QDRFVAGSHEALHCHGFRAENTIAFASVCRDEVALSLVEAIEKTWGEVFTFSSLGGMLTLGKTGFSAAQQHAPIEH-GRERYAYYALPHIAIDAQGEFGNYYRPGRQKVSHACGALVAFHHELANGALELALDPDDLEQSILKQ---HLLRKLKYGEVPNLLSLTRIAHAVIVEELERMIRLTVDPMRSDYGLFTGIQIHAPEGRHFVWPGTAYAV 228
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BLAST of mRNA_S-ischiensis_contig81.19865.1 vs. uniprot
Match: A0A836CN60_9STRA (Low-co2 inducible protein lcib n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN60_9STRA)

HSP 1 Score: 177 bits (448), Expect = 4.240e-51
Identity = 99/230 (43.04%), Postives = 133/230 (57.83%), Query Frame = 1 
Query:    7 EEYFLASAVTALAEQGFSGDTAIACVSVCRDERCGTFLSVLRELVGPVFDMRSLGGFITCGKTGFGAAHAHAPISSDGRERYVYFCAPHIAIDKDGAVAPVERPGRERMSTACGALCALKGQLEQGPLDITPDVDDLEMSIIKQVAPHLARRTSEDGPLDLAGITKLAEQVIVE-QLEGLVSATVDTTQADYAIVAGIQVHGPE-GKDYFYPCYRHCVTCVEGVREPLVI 690
            E  F+ +  + L + GF  D +IACV +CRDE CG+ ++ ++   G  F  R LGGFI  GKTGFGAAHAH P + DGR +YVY  APHI I +DG +    R G    STACGAL A  G L  G +     +DDLEMS +  +   L +        DLA +TK+A ++I E Q+   ++ATVD  +ADYA++ GIQ+HGP   + Y  P    C   V+G +  L I
Sbjct:   39 EAAFVDACASVLNKAGFREDNSIACVGICRDEICGSLMTEVQSKFGESFGFRGLGGFIFAGKTGFGAAHAHCPANPDGRHKYVYIVAPHIGIGQDGKLGSCNRAGIGHTSTACGALAAFHGGLSSGSVSPQLAMDDLEMSAMSAL---LLQSIPWGTVPDLAELTKIAARIIAEKQVAAAIAATVDPAKADYAMITGIQIHGPGLQQTYIMPIADLCYAVVDGEKTMLSI 265
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BLAST of mRNA_S-ischiensis_contig81.19865.1 vs. uniprot
Match: A0A7S4D203_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4D203_9EUGL)

HSP 1 Score: 179 bits (453), Expect = 2.770e-50
Identity = 99/226 (43.81%), Postives = 136/226 (60.18%), Query Frame = 1 
Query:    1 MPEEYFLASAVTALAEQGFSGDTAIACVSVCRDERCGTFLSVLRELVGPVFDMRSLGGFITCGKTGFGAAHAHAPISSDGRERYVYFCAPHIAIDKDGAVAPVERPGRERMSTACGALCALKGQLEQGPLDITPDVDDLEMSIIKQVAPHLARRTSEDGPLDLAGITKLAEQVIVEQLEGLVSATVDTTQADYAIVAGIQVHGPEGKDYFYPCYRHCVTCVEGVRE 678
            MPE  FLA     L E G + D AIA +SVCRDE     +  L E  G  F M S+ G +  GKTG GA  AHAPI  DG ERYV+  APHIAI + G +    RPGR++++ ACGAL A+ G+L+ G L +T D  DLE+S +KQ    LA   +     DL G+TK A+++I +QLE ++ A  D +  ++A V+G+Q+HGP+G ++F+P   +     EG  E
Sbjct:  103 MPEIEFLAKTTKVLNEAGLNKDNAIAMISVCRDEFTREIVESLDEFWGQSFSMGSIAGMVNMGKTGMGAGMAHAPICPDGVERYVFVSAPHIAISEKGEIGKCYRPGRKQINAACGALLAMLGELQDGKLQVTLDTTDLEISKMKQ---QLAGYLTYGKVPDLVGLTKAAQKLIEDQLEAIL-AEKDLSNTEFAFVSGVQIHGPDGMNFFWPTVFYINKRGEGKME 324
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BLAST of mRNA_S-ischiensis_contig81.19865.1 vs. uniprot
Match: A0A356R8V0_9BACT (LCIB_C_CA domain-containing protein n=1 Tax=Nitrospiraceae bacterium TaxID=2026770 RepID=A0A356R8V0_9BACT)

HSP 1 Score: 167 bits (423), Expect = 1.090e-47
Identity = 92/229 (40.17%), Postives = 131/229 (57.21%), Query Frame = 1 
Query:    4 PEEYFLASAVTALAEQGFSGDTAIACVSVCRDERCGTFLSVLRELVGPVFDMRSLGGFITCGKTGFGAAHAHAPISSDGRERYVYFCAPHIAIDKDGAVAPVERPGRERMSTACGALCALKGQLEQGPLDITPDVDDLEMSIIKQVAPHLARRTSEDGPLDLAGITKLAEQVIVEQLEGLVSATVDTTQADYAIVAGIQVHGPEGKDYFYPCYRHCVTCVEGVREPLVI 690
            P E F+  ++  L   GF  D  +AC S+CRDE    F++ L +    +F+  SL G +  G TGF AAH HAP + DG+ERY+YF  PHI ID+ G      RPGR  MS ACGAL  +     QG ++   + DDLE S++K+    L R+  +    DL  +TK+A+ +I E LE ++  TV+ T   YA+ +GIQ+HGP  + + +P   + V  V G+RE L I
Sbjct:   34 PSELFIDHSIQILHPLGFGPDNTMACASLCRDEMTRPFINSLNKSWHSLFNFSSLAGMLYLGVTGFKAAHQHAP-NLDGKERYIYFAFPHIGIDEYGVPGNCRRPGRHEMSHACGALLNVMQDFSQGSVEPDLNQDDLEQSLLKK---RLFRKLGQGEVPDLVSLTKIAQNIIREDLERMIQLTVEQTSIAYAVFSGIQIHGPHNQTWIWPDTAYAV--VNGIREDLDI 256
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BLAST of mRNA_S-ischiensis_contig81.19865.1 vs. uniprot
Match: A0A7S4FTA7_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4FTA7_9EUGL)

HSP 1 Score: 171 bits (432), Expect = 3.200e-47
Identity = 95/212 (44.81%), Postives = 131/212 (61.79%), Query Frame = 1 
Query:    1 MPEEYFLASAVTALAEQGFSGDTAIACVSVCRDERCGTFLSVLRELVGPVFDMRSLGGFITCGKTGFGAAHAHAPISSDGRERYVYFCAPHIAIDKDGAVAPVERPGRERMSTACGALCALKGQLEQGPLDITPDVDDLEMSIIKQVAPHLARRTSEDGPLDLAGITKLAEQVIVEQLEGLVSATVDTTQADYAIVAGIQVHGPEGKDYFYP 636
            MPE  FLA     L E G + D AIA +SVCRDE     +  L E  G  F M S+ G +  GKTG GA  AHAPI  DG ERYV+  APHIAI + G +    RPGR++++ ACGAL A+ G+L+ G L +T D  DLE+S +KQ    L   T  + P  L  +TK + ++I +QLE +++A  D +  ++A V+G+QVHGP+G ++F+P
Sbjct:  103 MPEIEFLAKTTKVLNEAGLNKDNAIAMISVCRDEFTREIVESLDEFWGQSFSMGSIAGMVNMGKTGMGAGMAHAPICPDGVERYVFVSAPHIAISEKGEIGKCYRPGRKQINAACGALLAMLGELQDGKLQVTLDTTDLEISKMKQQL--LGYFTYGEVPT-LVQLTKASRRLIEDQLEAILAAK-DLSNTEFAFVSGVQVHGPDGFNFFWP 310
[Close]
BLAST of mRNA_S-ischiensis_contig81.19865.1 vs. uniprot
Match: A0A2V0NLI2_9CHLO (LCIB_C_CA domain-containing protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NLI2_9CHLO)

HSP 1 Score: 163 bits (413), Expect = 1.380e-44
Identity = 97/254 (38.19%), Postives = 143/254 (56.30%), Query Frame = 1 
Query:   10 EYFLASAVTALAEQGFSGDTAIACVSVCRDERCGTFLSVLRELVGPVFDMRSLGGFITCGKTGFGAAHAHAPISSDGRERYVYFCAPHIAIDKDGAVAPVERPGRERMSTACGALCALKGQLEQGPLDITPDVD------DLEMSIIKQ-VAPHLARRTSEDGPLDLAGITKLAEQVIVEQLEGLVSATVDTTQADYAIVAGIQVHGPE----GKDYFYPCYRHCVTCVEGVREPLVI--VPLEHLKQMNGKAG 732
            E F++    AL++ GF+G+ AIA  ++CRDE      + +  + G  F+   LGG +TCG TG GA  +H+P+  +GRERYV+F +PH A+D+ G +  + RP R   S ACGA+ A   QL+   LD    V       D EMSI+KQ +A  +     E   ++LA IT +AE+VI + LE L+S  VDT++ADYA+V G+Q+H       G ++ +         V GVR  + +  VP    +Q+N  AG
Sbjct:   96 EDFVSRVERALSQFGFNGNNAIAMTNLCRDEVTTILKAEIESVFGSSFNTNGLGGVLTCGVTGMGAGLSHSPVCPEGRERYVFFASPHCAVDEHGELGAISRPNRPGKSCACGAMAASLAQLQSEGLDSNVRVPGVHDPLDPEMSILKQRLARRIQAENMEPANMNLADITSVAERVIADDLEFLISKAVDTSKADYAVVTGVQIHNWSTDLAGANFEFVAPTRAYAVVNGVRTDIDLESVPPLTPRQLNTIAG 349
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BLAST of mRNA_S-ischiensis_contig81.19865.1 vs. uniprot
Match: A0A419J0V3_9BACT (LCIB_C_CA domain-containing protein n=1 Tax=Nitrospiraceae bacterium TaxID=2026770 RepID=A0A419J0V3_9BACT)

HSP 1 Score: 156 bits (395), Expect = 1.010e-43
Identity = 90/226 (39.82%), Postives = 129/226 (57.08%), Query Frame = 1 
Query:    7 EEYFLASAVTALAEQGFSGDTAIACVSVCRDERCGTFLSVLRELVGPVFDMRSLGGFITCGKTGFGAAHAHAPISSDGRERYVYFCAPHIAIDKDGAVAPVERPGRERMSTACGALCALKGQLEQGPLDITPDVDDLEMSIIKQVAPHLARRTSEDGPLDLAGITKLAEQVIVEQLEGLVSATVDTTQADYAIVAGIQVHGPEGKDYFYPCYRHCVTCVEGVREPL 684
            E  F+      L   GF+ +  IA   +CRDE   +  SV++ + G  F+  SL G    GKTG  AA  H+PIS  G+E+YV++  PHIAI+K+G +    R GRE  STACGAL A + ++  G +++T D +D+E S+I+     L R        DL  +T+ A + I   LE  +S  VDT +++YAI++GIQ+HGP G +Y +P    C T V G RE L
Sbjct:   17 EVEFVKKTYQVLEPLGFNDENTIAGKCICRDEISQSIRSVIKHMWGEAFNFSSLAGMFFAGKTGLAAAMHHSPISG-GKEQYVFYALPHIAINKEGRIGVCRREGREEESTACGALNAFQKEMASGKVNLTMDNEDVEQSLIRM---RLLREIPYGHVPDLLELTRTALKAIQSDLETTISKVVDTNKSNYAIISGIQIHGPSG-NYVWP--SECYTVVNGKRETL 235
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BLAST of mRNA_S-ischiensis_contig81.19865.1 vs. uniprot
Match: A0A7S1HDB7_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HDB7_HEMAN)

HSP 1 Score: 161 bits (407), Expect = 4.670e-43
Identity = 87/212 (41.04%), Postives = 127/212 (59.91%), Query Frame = 1 
Query:    1 MPEEYFLASAVTALAEQGFSGDTAIACVSVCRDERCGTFLSVLRELVGPVFDMRSLGGFITCGKTGFGAAHAHAPISSDGRERYVYFCAPHIAIDKDGAVAPVERPGRERMSTACGALCALKGQLEQGPLDITPDVDDLEMSIIKQVAPHLARRTSEDGPLDLAGITKLAEQVIVEQLEGLVSATVDTTQADYAIVAGIQVHGPEGKDYFYP 636
            +PEE  +      L   GF+  T+I  VS CRDE C  F   L    G  F++ SLGG + CG+TGF AA AH+P + +G+ERYV++ APHIAI   G    + R GRE +S ACGAL AL G++++G LD+T + DDLE S++KQ   H+           L  +T  A + I  ++  +  A+V+  Q +Y ++AG+QVHG  G+++F+P
Sbjct:  146 VPEEVLIEHMTKVLNNHGFNPKTSINLVSCCRDELCRPFTEELDRKWGHSFNISSLGGMVFCGRTGFKAAMAHSP-TVEGKERYVFWVAPHIAIPMSGEEGTIFRDGRENVSHACGALLALLGEIKRGKLDLTLNNDDLEQSLLKQ---HIVSHLQYGQVPSLVQLTYAAYECIRSEVHRVARASVNPKQCEYVVIAGVQVHGALGQNFFWP 353
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig81.19865.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZEI4_9STRA6.150e-5743.83Low-co2 inducible protein lcib n=1 Tax=Tribonema m... [more]
A0A836CPA8_9STRA3.500e-5345.65LCIB_C_CA domain-containing protein n=1 Tax=Tribon... [more]
A0A1W1I999_9BACT2.390e-5143.98Low-co2 inducible protein lcib n=1 Tax=Nitrospira ... [more]
A0A836CN60_9STRA4.240e-5143.04Low-co2 inducible protein lcib n=1 Tax=Tribonema m... [more]
A0A7S4D203_9EUGL2.770e-5043.81Hypothetical protein (Fragment) n=1 Tax=Eutreptiel... [more]
A0A356R8V0_9BACT1.090e-4740.17LCIB_C_CA domain-containing protein n=1 Tax=Nitros... [more]
A0A7S4FTA7_9EUGL3.200e-4744.81Hypothetical protein (Fragment) n=1 Tax=Eutreptiel... [more]
A0A2V0NLI2_9CHLO1.380e-4438.19LCIB_C_CA domain-containing protein n=1 Tax=Raphid... [more]
A0A419J0V3_9BACT1.010e-4339.82LCIB_C_CA domain-containing protein n=1 Tax=Nitros... [more]
A0A7S1HDB7_HEMAN4.670e-4341.04Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig81contigS-ischiensis_contig81:150333..158128 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score157.5
Seed ortholog evalue7.8e-36
Seed eggNOG ortholog554065.XP_005846604.1
EggNOG OGs28IGY@1,2S48Q@2759,34K0U@3041,37YUP@33090
Best tax levelChlorophyta
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons5
Model size732
Cds size732
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig81.19865.1prot_S-ischiensis_contig81.19865.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig81 150333..158128 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817312.2788503-CDS-S-ischiensis_contig81:150332..1504641622817312.2788503-CDS-S-ischiensis_contig81:150332..150464Schizocladia ischiensis KU_0333CDSS-ischiensis_contig81 150333..150464 -
1695741017.7720907-CDS-S-ischiensis_contig81:150332..1504641695741017.7720907-CDS-S-ischiensis_contig81:150332..150464Schizocladia ischiensis KU_0333CDSS-ischiensis_contig81 150333..150464 -
1622817312.289652-CDS-S-ischiensis_contig81:151507..1515911622817312.289652-CDS-S-ischiensis_contig81:151507..151591Schizocladia ischiensis KU_0333CDSS-ischiensis_contig81 151508..151591 -
1695741017.7837408-CDS-S-ischiensis_contig81:151507..1515911695741017.7837408-CDS-S-ischiensis_contig81:151507..151591Schizocladia ischiensis KU_0333CDSS-ischiensis_contig81 151508..151591 -
1622817312.299938-CDS-S-ischiensis_contig81:153569..1536441622817312.299938-CDS-S-ischiensis_contig81:153569..153644Schizocladia ischiensis KU_0333CDSS-ischiensis_contig81 153570..153644 -
1695741017.7970762-CDS-S-ischiensis_contig81:153569..1536441695741017.7970762-CDS-S-ischiensis_contig81:153569..153644Schizocladia ischiensis KU_0333CDSS-ischiensis_contig81 153570..153644 -
1622817312.3158898-CDS-S-ischiensis_contig81:154948..1551351622817312.3158898-CDS-S-ischiensis_contig81:154948..155135Schizocladia ischiensis KU_0333CDSS-ischiensis_contig81 154949..155135 -
1695741017.8087897-CDS-S-ischiensis_contig81:154948..1551351695741017.8087897-CDS-S-ischiensis_contig81:154948..155135Schizocladia ischiensis KU_0333CDSS-ischiensis_contig81 154949..155135 -
1622817312.326415-CDS-S-ischiensis_contig81:157874..1581281622817312.326415-CDS-S-ischiensis_contig81:157874..158128Schizocladia ischiensis KU_0333CDSS-ischiensis_contig81 157875..158128 -
1695741017.8184984-CDS-S-ischiensis_contig81:157874..1581281695741017.8184984-CDS-S-ischiensis_contig81:157874..158128Schizocladia ischiensis KU_0333CDSS-ischiensis_contig81 157875..158128 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig81.19865.1

>prot_S-ischiensis_contig81.19865.1 ID=prot_S-ischiensis_contig81.19865.1|Name=mRNA_S-ischiensis_contig81.19865.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=244bp
MPEEYFLASAVTALAEQGFSGDTAIACVSVCRDERCGTFLSVLRELVGPV
FDMRSLGGFITCGKTGFGAAHAHAPISSDGRERYVYFCAPHIAIDKDGAV
APVERPGRERMSTACGALCALKGQLEQGPLDITPDVDDLEMSIIKQVAPH
LARRTSEDGPLDLAGITKLAEQVIVEQLEGLVSATVDTTQADYAIVAGIQ
VHGPEGKDYFYPCYRHCVTCVEGVREPLVIVPLEHLKQMNGKAG
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mRNA from alignment at S-ischiensis_contig81:150333..158128-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig81.19865.1 ID=mRNA_S-ischiensis_contig81.19865.1|Name=mRNA_S-ischiensis_contig81.19865.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=7796bp|location=Sequence derived from alignment at S-ischiensis_contig81:150333..158128- (Schizocladia ischiensis KU_0333)
ATGCCAGAGGAGTACTTCCTCGCCAGTGCGGTCACTGCCCTGGCTGAGCA
GGGCTTCTCCGGGGACACGGCAATCGCTTGTGTCAGCGTCTGCCGAGACG
AGCGCTGCGGGACTTTCCTCAGCGTCCTCAGAGAACTCGTCGGTCCCGTG
TTCGACATGCGGAGCCTGGGCGGTTTCATCACCTGTGGCAAGACGGGCTT
CGGGGCGGCGCACGCCCACGCTCCCATTTCCAGCGACGGGCGAGAACGCT
ACGTGTGAGTGCCAGCGGGTGTGGGTGGGAGCAGCGGTTTTACTGGCAGT
TCCTTGTTTCTGACGTTTTGAGTGGCGGAAGAGCACTGGTGCCCACCAAA
TCGACAGTTCCCCGTCGGGCCGGGAGGCCGGAACAAGTAGTTGTCTTTTG
GGACGTGGTGACTTCCCGAGTCTTGCATTGAGCACACACACACAAACGCA
CACATGCATGCATGCATGCAAGCACGTGCGCGCGCACACACACACGTACG
CACGTACACAAGCACGCACACACACATGCGCACACACGCACACACAGTGA
GTGCTACGTAGGGTGCAGGCAGATCCATTAGACTACACCTCACATCAGTG
TCCCATCGTCCTCTAAAGGGTTTACTTGAACAGAGCCTCCCTTTTCCCCT
ATCTTCCGTTCAGTAGCGTGCCGTTTCACGCTTGCGGGGCAACGGTGCAC
TCCAGCAAGCGCATGTACAAGTAGTAGTTGTAGTAGTAACAGTTGTTGGT
GTTGTTGTCCTAGTGGTGGAAGTAGTAGCACGAGTAGTATTGGTACAGTA
GTTGTAGTATTAGGGTGTTTGCGCTAAGAATTTTTCACGTAGTTTGGGGA
CTAATGCCGAGGGCGTTCAATCCTTGCGGAGGCATTCTGCTTCTCTCGTG
AAATCTCCCGCCGTGGTCAGGAGGCCATTTAACGCCCGAAGTCTAGTGAA
AATGAAAAGCGTTCGGGAACAGACGTCGAGCAGGGCTGTGGCAGAGAGAG
AGAGGGAAGTACAGTGAAATGCGTTCCTACACTCCTACGCGGCCCGTCGC
CCAGCGACATGTCCCCCCTATGCCCATTGCAGCCAACCCAGAGGCCGGCG
AAGGTGCGAAACCCCCTGTCCCAGTACATTCTCACGCCCATTTCCATATT
GGTGTGAGCGCAAAGGGCTCCACTTATTCTGGCGGGTGGCGGGAGAATTT
CACCAAGGGTCCCGGGCCGGCGCTTGGTGAAGTTTAGTTCCGGAACGGGA
TGCGCAAACACCCTATTGTAGTAGTAGTAGCAGCAGCATTAGTGGCAGTA
GCGAGTGGTGCGAAGTATTCATTGTCGTAGTAGTAGTAGCAGTAGTAGTG
GTAGTAGTAGTAGTAGTAGTAGTATAGTAGTATTTTAAGGAACAACACGG
GGCGAGGTGTGGGCCACGTCACTCGAGACCTCGACAATAGTAGCAGTAGC
AGTAGTAGTAGTAGTAGTAGTGGTAGTAATATTAGCAGGAACAACACAGT
GCGAGGTGCAGGCCACGTCACTAATGACCTCAACAGTGTCTCTTCCTTAC
CTCGCTAGGAGTATTACAGTGTAGTGACAATCTGTGTTTGCATATGAATT
GGCCGATAGTGTTCCACGAGTACTCGAGTATATGCATTGGCTGATAGCGT
TCTATATACTGTATACTTCGAAGTATACACAGTATATATTGACTGATAGC
GTTTGACAAGCCGAGCGTGTCTTCCAGTAGCTGCTTCGTAGTAAAGCACC
CTAGAAAACTATACAAGTAGCACACAGTTTTGCTGTTCATGGCATGTTCA
GTCGAGGGCAATGCCGGTAATGAGGGACAGCCACCCAGTACCGCCAAGGA
ACTTGACATAAAATGATAAGTAGGGCGATTCACGGGTTGCGGGTTTGTGT
TGTAGGTCTAGCATGAGTTGCGGGTTCTGCCGATGCAAACTCTTTCGTAC
TTCGAAGTACGTGGCTGGAGGTGCAGTGGTTGTGGAGTTGTGGCACTTTG
AAGCCCGGGCTGTGCACGCCGGGGTCAAAGGCCCGCCGCAAGGAAGACGA
AAGAAAATGACTACGACGCGGTGCGGGGCACGGATTTGTTTTTCGTGTAG
AGGGCCTAGCTAATGGGCCGGCGGGTTTTCTCCTCCGCGCACCGAGCATA
GTCAATCTAGCTACTTGGTGGTTGAAAACCGATCTTCTTAACTGCTTGGT
GATTGAACAACAATCTCCTTCACTACTTGGCCGTTGAAAACCACTCTCCT
TAACTGATTGGTGATTGAAAACCAAGTTGCTTAACTACTTGGGTGATGGA
AAACCAACCTCCTAACTACTTGGGCAATGAAACACCAGTGCCCGTAACTA
TTTGATATATGTACTCAAGATTCACGTACTGTACATCATCTCCTCCGCAC
GCCGGGCATAGGCATGGCACTTGGGCCAAGGACACTCACTGAGGCCATGT
ACCCTTAGCCCCTTCCCCCCTGAGGTCTGTATATTCATGGGGTTCTAGTG
TGTTAGTCCAATTTTGCAGGGGTAAAAGCGTTAAAGTACAGTACAACACA
GTACTGAGCAGTGTGTGGGCTCGCGGGATGCGACGTGCTTCGAAGTATAT
GCACGAAGTACATGTGCTCACGCTGTGCTTGCCGTAGTCCGTAGAGCATT
GCGTTTTAACGTATCCAAGTAGTAAGGAGATTGACTTTCGAAGAACCAAG
TAGTTAAGGAGACTTCGTTTCATGAAGTCCAAATAGTTACAAGTATACAC
ACATGTGTGTGCTCATGTTTGTGTTTGCTGACAAAGGAGGGGAAACCCTT
TAGCTGTTTCCTTGAACTGTTTGCGGTCGCACGGGTACTTCTGCGCACCG
CACATCGCCATCGATAAGAACGCCCGACGAAGGAGGGGAAACCCTTTGGC
TCTTTGCGTTCGCGCAGGTACCTTTTGCGCGCCGCGCATCGCCATCGACA
AGAACGCCTGACGAAACCCTTCTAACTCTTTGTGGTTTTTCAGGTACTTC
TGTGCGCCGCACATCGCCATCGACAAGGACGGGGCCGTGGCCCCCGTGGA
GCGGCCCGGTCGTGAGCGCATGTCCACGGCATGCGGGGCTTTGTGCGCTC
TTAAGGGCCAGCTGGAACAGGGACCCCTGGACATCACGCCCGACGTGGAC
GATCTGGAGATGTCCATTATAAAGCAGGTGAGCCCCTAGTGGTGATGAAG
CTATTTGATATTTTTTCGGGGGGAGACCGAGAGTGAGAGAGAGAGAGAGA
GAGAGAAGATGTCCCGTCTTTGTGCGCTCTCAAGGGACAGCTGGAACAGG
GACCCCTGGACATCTCGCCCGACTTGGACGATCTGGCGATGTCCATCATA
TAGCAGGTGAACCCCTAATGGTGATCAAGCTATTTGATTTGGTTTTGGGG
GGAGACAGACAGAGAGAGAGAGAGAGAGAGAGAGAAGATGTCCCGTCTTT
GTGCGCTCTCAAGGGACAGCTGGCACAGGGACCCCTGGACACCGCGCCCG
ACGTGGACGACCTAGAGATGTCCATCGTAAAGCAGGTGAACCCCTAATTG
GTGCCCTTTCAGGCCCTAATCAGAGGTGATTAGGGGTAGTTAGACCTAAA
ATGAAGGCTAATTAGCCCGACTTGGACGACCTGGAGATGTCCATCGTCAA
GCAGGTGAAGTGATGCGATGAAGCTATTTGCTTTGATTACAGTTCTTTCG
TGGCTTATCGATTGATACACGGAGGGAGACGACCTGGAGATGTCCATCGT
CAAGCAGTTTAGGCGAAGCCGTTTGATCCGATTTTGATGCTAGAGTACGT
TTTTTATTGACTTATCTATCGATCGCTGGAGGGAGATAAACTGACCTGGA
GATGTCCACCATCAAGCAGGTGGCGTGATGAAGCTATTTGATGTGGTTTT
GATGATATACTTGGAAGTACTTCTTTCTTGGCTTGTCGATTGATCGCTAT
AGAGAGATTAGTCTACCACATACTTCAAACTAACTACTAGTAGTATAAAC
AGGATATACACCGGGCGGGGTGCAGGCCACGATACTAAAGGCCTCTACGG
TGGCCCTTCCTTAGCGCTCCAGGGAAGGGTTGTGTGGGGAGGAGGAGGAG
GAGGAGGAGGAGGAAGGAGAGGAGGGGGGAGGTACTGTTCCCCGCACGAA
GTACTATTGGTTGTGATTGACTCCCCAAGAGCGGATGGCAAATGTGTGAC
TACGATCACCACATAGACTGACTGACTGATTGACTTTCATTACTTGTCTA
TGGACTGCTTGCCTACACCAGTGGATCACCGCACGGACTGACTGCCTGAT
TGGCTTTCACTTATCAATCAAGTGCTTGCCTACGACAGTGGATGGCACTG
TGCGACTAAGATAGCCTCACAGACTGACTGACTGATTGGCTTTCCTTTAT
GCATCGCCTTTCCTTTATCTATGGTATGACAGCGGATATCATGTGACTGA
CTGATTGGCTTTCATTTTCTATCAACAGCGGATGGCGCCCCACCTGGCAA
GGCGTACGAGCGAGGACGGACCGCTGGACCTCGCCGGCATAACCAAGCTG
GCTGAACAGGTGCGTTAGGAGACTTTGAGTTGCAAACAACCCAGGCACAG
CAGCTTGGAGAGTTGATTTCTGAATGTGCCCGAATGCGTGGGAGGCCGGG
TACAATCGTATGCATGTGTGGGTCCCGATACCGACGGGTGCTTGCCATAG
TCCCCAGACTATTCTAGATGTGCCCGAATACGTGGGAGGCCGGGCACAAT
CGTAAGCATGTGTGGGTACCGACGGGTGCTTGCCATAGTCCCCAGACCAT
TCTAGATGTGCCCGAATACATGGGAGGCAGGGCACAATCGTAAGCATGTG
TGGGTACCGACGGGTGCTTGCCATAGTCCCCAGACCATTCTAGGTGTGCC
CGAATACGTGGGAGGCCGGGCACAATCGTAAGCATGCGTGGGTACCGATA
CCGACGGGTGCTTGCCATGGTCCCCAGACCATTGGCCACGCATGTCAGTC
GAGATGGAGTAGTAGTCTTGCCTGGGCTCTGCCAGGGGAAGTAGGGGCCC
TGTTCCGTCTCGGTCGAGGCGCGTGGGTAACGGTCTCGAGCGTACGGCAA
GCACAGCGTGAGTACACACACACATATATATATATATATATTTATAAGGG
TGCTGTGCTCCATTTTTTTCTCGCCTTGCCTGCTCCGCCTCGCACGAGGC
GCGGGGTGAATGGTCTCGGGCCTACGGCAAGCACCACGTGATTACGAAGT
ACATACACTCGTATATACCTAGTGTAGTTGGCCGTTGGAAATGCAACCCC
CTAGCTACTTGGGCTGTTTGAAGCCTAAGTAAGTCTCCCGACTGCTTGGT
GTTTTTTTTGTGAATGGTCTTGGGACTGCGGCAAGCCCAGCGTGAGTAAA
TACTTTGTAGATGTACTGTACTTCCAGTATATGTCTCCTAGCTACTTGGA
CATTTGGAAATGCAAGCCCCCAAACTCGGTAGGTGGTACTAGCTAGTTCC
TTTGGCCTTTAGGAGAAACAATTGAGTATGCTCTTTCCTAAAGTTTTGTT
CAACTCGCCGAATAATTGGCCGCTTCATCTGAAGGTATCACGTCAAAACC
TTGTACCTCAGCCTTCAGAACAAATCTCAAGCTGAAGGTCGGGACGTTGA
AGTTGAAGGTTTTTCGGAACTTACTGGTGGCCCCGACTGTACTTGGCTTG
TCGGAAACCCAAGCAAGCCTCCTACAGTAACTACAAAGCACTTTGGATGT
TTTGATCAAATGGTGTCGGTACTGCTGCCAGCCCAGCGTGAGTGCATACA
TTTTTCTGAGTGCCGTGCTGTAGGTTCGAGTCGTTGATATATGCATGAAC
TGTTACGACTCTACAGGTGATTGGGGGAACAGCTGGAGGGGCTTGTGGCT
GCGTATGGTTAATATTTGTGATGTGATTGATGCAAAGTGTACTCTAGTGT
GCTGTAGTTTGACATCACATCACATCACATCACAACAGGTGATTGTGGAG
CAGCTGGAGGGGCTTTTGCCCTACTTGTTGTTGGCATTTGTGATGTGATT
TGATGCGATGTGTAGTCTCATGTGCTGTAGTTTGACATCACATCACATCA
CATCACATCACATCTCAGGTGATTGTGGAGCAGCTGGAGGGGCTTGTGGC
TACTTATTGTTGGCATTTGTCATGTGATTCGATGTGATGTTTACTCTAGT
GTGCTGCAGTTTGACATCACATCACATCACATCACAACAGGTGATTGTGG
AGAAGCTGGAGGGGCTTGCTGCTGCTTGTGGTGAACATTTGTGATGTGAT
TTGATGTGATGTGTACTCTAATGTGCTGCAGTTTGACATCACATCACATC
ACATCACAACCTGATGCTATTCCAGGTGATTGCGGAGCAGCTGGAGGGGC
TGATTGACAATCCTTGTCCTCAACCACTTGGGTTGTTGGACATTCCTTCT
CCTTCACTACTTGGGCTATTTGACAATCCTTCTCCTTAACTACGTGGGTT
ATTTGACAATCCTTCCCCTTTTACGATCTTGCTCCAGGTGATTGTGGAGC
AGCTGGAGGGTCTTGTTTCTGCCACGGTAGACACAACGCAGGCAGACTAT
GCCATTGTGGCTGGCATTCAGGTGGGCCAAACAGCGCTGCTGTATCTGTA
TCCTACTACTGCACAGTAGGCCGTGTTTGCTGTGCATCAGTACTTGTACA
AAGTACTCCATTTCTCGAGCACATTTTGTACTGTAAGTAGGCGTGTGCGC
ACACGAGTACATTGCAGTACAGTAATCTGGTAGCCATACCTCCAAGGATA
TTCGTGTACTTTGAAGCACTTGAAGTACTGCAGTACAGTCTTCGTCCCCT
CCTCCTCCTCCTCCTCGTCCTCCTCCTGCCCCCCTTCTTCCCCACACAGT
CCTTCCCTGGCAAGCTAGGGAAGGGCCACTGTTGAGGTCTTTAGTGACGT
GGCCTGCGCCTCGCCCTGGGTTGTTCCTGTTTATGCTGGGCACCTAGAGT
GTATATACAGTACATACACTGGGTTTTTCCTGTTGATACCACACCTACAA
GTACTCATGTCGGACAGGGTTGCCCCATGCATGCCACCGCCGACCTGTTC
GGACCCATTGAAGTCCAGAAACTAACCAGACACGAGCAAGGCCATACTAG
CCCTTGGCCCGGCCACCCCCACGCTCGTGCACGCACGCACGCGCGCGCGC
GCACACACACACACACACATGTGTGTGTGTGTGTGTGTGTGTACACAGGC
GTGTGCCACTTCCAGGAGTAGCACCCACTGTATACATGGCAGTGGCTATG
GCCACGGACTGTCTAGCAACACAGATCCTCTACCCAACACCACCGCCACC
GCCACCACCAGCTCTCATGTTCTTCCGGCGCCACCCACCTACCGTAAAGG
AAGTGGAATATCGAACCCTTGGGGCCAACCAGCGGCAAAGGATTCTCGCC
GGATCGGTTTTCGATCGAATCGAAAACCCTCGGAATGAAAGCCTTTGGTC
GAGACCGATACGTTCCGAGGGTTTTCGATTCGATCGGGAAGCGATCCGGC
GAGAAAAAATTGCCCGCCGGTTGTCCCCAAGGGTTTCGATATTCCACTTC
CTTTACGGTGAGCCAACGCTCGTGAACCCCACTCCCTTCCAACCCCATTC
CCTTCCAACCCCAGGTGCATGGGCCGGAGGGCAAGGACTACTTCTACCCC
TGCTACCGGCACTGCGTCACATGCGTGGAAGGCGTGCGGGAGCCGCTGGT
GATTGTGCCGCTGGAACACCTAAAGCAAATGAACGGAAAGGCCGGC
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Coding sequence (CDS) from alignment at S-ischiensis_contig81:150333..158128-

>mRNA_S-ischiensis_contig81.19865.1 ID=mRNA_S-ischiensis_contig81.19865.1|Name=mRNA_S-ischiensis_contig81.19865.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1464bp|location=Sequence derived from alignment at S-ischiensis_contig81:150333..158128- (Schizocladia ischiensis KU_0333)
ATGCCAGAGGAGTACTTCCTCGCCAGTGCGGTCACTGCCCTGGCTGAGCA
GGGCTTCTCCGGGGACACGGCAATCGCTTGTGTCAGCGTCTGCCGAGACG
AGCGCTGCGGGACTTTCCTCAGCGTCCTCAGAGAACTCGTCGGTCCCGTG
TTCGACATGCGGAGCCTGGGCGGTTTCATCACCTGTGGCAAGACGGGCTT
CGGGGCGGCGCACGCCCACGCTCCCATTTCCAGCGACGGGCGAGAACGCT
ACGTATGCCAGAGGAGTACTTCCTCGCCAGTGCGGTCACTGCCCTGGCTG
AGCAGGGCTTCTCCGGGGACACGGCAATCGCTTGTGTCAGCGTCTGCCGA
GACGAGCGCTGCGGGACTTTCCTCAGCGTCCTCAGAGAACTCGTCGGTCC
CGTGTTCGACATGCGGAGCCTGGGCGGTTTCATCACCTGTGGCAAGACGG
GCTTCGGGGCGGCGCACGCCCACGCTCCCATTTCCAGCGACGGGCGAGAA
CGCTACGTGTACTTCTGTGCGCCGCACATCGCCATCGACAAGGACGGGGC
CGTGGCCCCCGTGGAGCGGCCCGGTCGTGAGCGCATGTCCACGGCATGCG
GGGCTTTGTGCGCTCTTAAGGGCCAGCTGGAACAGGGACCCCTGGACATC
ACGCCCGACGTGGACGATCTGGAGATGTCCATTATAAAGCAGGTGGTACT
TCTGTGCGCCGCACATCGCCATCGACAAGGACGGGGCCGTGGCCCCCGTG
GAGCGGCCCGGTCGTGAGCGCATGTCCACGGCATGCGGGGCTTTGTGCGC
TCTTAAGGGCCAGCTGGAACAGGGACCCCTGGACATCACGCCCGACGTGG
ACGATCTGGAGATGTCCATTATAAAGCAGGTGGCGCCCCACCTGGCAAGG
CGTACGAGCGAGGACGGACCGCTGGACCTCGCCGGCATAACCAAGCTGGC
TGAACAGGCGCCCCACCTGGCAAGGCGTACGAGCGAGGACGGACCGCTGG
ACCTCGCCGGCATAACCAAGCTGGCTGAACAGGTGATTGTGGAGCAGCTG
GAGGGTCTTGTTTCTGCCACGGTAGACACAACGCAGGCAGACTATGCCAT
TGTGGCTGGCATTCAGGTGATTGTGGAGCAGCTGGAGGGTCTTGTTTCTG
CCACGGTAGACACAACGCAGGCAGACTATGCCATTGTGGCTGGCATTCAG
GTGCATGGGCCGGAGGGCAAGGACTACTTCTACCCCTGCTACCGGCACTG
CGTCACATGCGTGGAAGGCGTGCGGGAGCCGCTGGTGATTGTGCCGCTGG
AACACCTAAAGCAAATGAACGGAAAGGCCGGCGTGCATGGGCCGGAGGGC
AAGGACTACTTCTACCCCTGCTACCGGCACTGCGTCACATGCGTGGAAGG
CGTGCGGGAGCCGCTGGTGATTGTGCCGCTGGAACACCTAAAGCAAATGA
ACGGAAAGGCCGGC
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