mRNA_S-ischiensis_contig80.19817.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig80.19817.1 vs. uniprot
Match: A0A6H5KMS3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KMS3_9PHAE) HSP 1 Score: 232 bits (592), Expect = 1.800e-73 Identity = 114/164 (69.51%), Postives = 132/164 (80.49%), Query Frame = 1
Query: 37 EGTELAPLIESTFVLACSSGDYDMGLNSFISVVKQAYEQGYTVPALTMEVSMCPNQTAGRPLQRDEIELRSVWLALVYLTLEKARWPQKKARALEISAPFMDKFSEFVDNIMNAYARGHTLETLKLEQVMRKGMEPDNPLEYAVLSQSMRIVFSTLKLMGEGWS 528
E LA L+ESTFVLA + Y+MGL +FIS +K+AYE+GYTVPALTMEVS P +TAGR L DE+ELRSVW+ALVYLTLE A WPQK RA EISAPFMD+F+EFV +MN A GHTL+TLKLE+VMR+G EP P+E AVLSQSMRIVF+TL LM EGWS
Sbjct: 125 EQQSLASLVESTFVLAAAGNSYEMGLKAFISTIKEAYERGYTVPALTMEVSFVPTKTAGRDLHPDEVELRSVWIALVYLTLENANWPQKVQRAHEISAPFMDRFAEFVKKVMNGAASGHTLQTLKLEEVMRRGAEPRTPMEAAVLSQSMRIVFATLDLMKEGWS 288
BLAST of mRNA_S-ischiensis_contig80.19817.1 vs. uniprot
Match: A0A836CF30_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF30_9STRA) HSP 1 Score: 172 bits (435), Expect = 9.680e-51 Identity = 78/138 (56.52%), Postives = 103/138 (74.64%), Query Frame = 1
Query: 46 ELAPLIESTFVLACSSGDYDMGLNSFISVVKQAYEQGYTVPALTMEVSMCPNQTAGRPLQRDEIELRSVWLALVYLTLEKARWPQKKARALEISAPFMDKFSEFVDNIMNAYARGHTLETLKLEQVMRKGMEPDNPLE 459
+LA ++E +FV+ACS GDY GL +FIS + +AYE G+ VP L+ME+ MC N +AGRPL +E+ELR+VW+ LVYLTLE+ARWPQ+ RA ISAPF ++F FV NIM A++ G+ L LKLE++MR G EP P E
Sbjct: 74 DLASIVERSFVVACSEGDYTRGLQAFISAIMKAYESGFAVPTLSMEIGMCGNNSAGRPLMAEEVELRTVWMTLVYLTLERARWPQRVPRAAGISAPFKNEFDPFVGNIMRAHSSGYDLNRLKLEEMMRGGTEPRTPFE 211
BLAST of mRNA_S-ischiensis_contig80.19817.1 vs. uniprot
Match: A0A7S2CCD5_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2CCD5_9EUKA) HSP 1 Score: 139 bits (349), Expect = 1.630e-37 Identity = 77/174 (44.25%), Postives = 103/174 (59.20%), Query Frame = 1
Query: 16 SPGNGGPEGTELAPLIESTFVLACSS---GDYDMGLNSFISVVKQAYEQGYTVPALTMEVSMCPNQTAGRPLQRDEIELRSVWLALVYLTLEKARWPQKKARAL---EISAPFMDKFSEFVDNIMNAYARGHTLETLKLEQVMRKGMEPDNPLEYAVLSQSMRIVFSTLKLMGE 519
SP P + L IESTFV A S +Y+ GL F+ + AY++G VPAL +E+SMC TAGRPLQ DEIELR+VWL+LVYLT E+ + K A ++A KF F +I+NA +G+ L TLKLE+V++ P E A+LSQ+MRI + +K E
Sbjct: 60 SPKAANPPSSPLTLAIESTFVQAASGMGGTNYEFGLMEFVRATRDAYDEGIMVPALNLELSMCQQYTAGRPLQADEIELRTVWLSLVYLTFERVGYESKSTEAFPGQSVAADLRHKFYTFTYDIVNAKKQGYDLATLKLEEVLQSSGIERTPTEQAILSQAMRICYLAIKAAEE 233
BLAST of mRNA_S-ischiensis_contig80.19817.1 vs. uniprot
Match: A0A8J2WDQ0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WDQ0_9STRA) HSP 1 Score: 132 bits (332), Expect = 8.660e-35 Identity = 75/170 (44.12%), Postives = 113/170 (66.47%), Query Frame = 1
Query: 49 LAPLIESTFVLAC---SSGDYDMGLNSFISVVKQAYEQGYTVPALTMEVSMCPNQTAGRPLQRDEIELRSVWLALVYLTLEKARWPQKKARALEISAP--FMDKFSEFVDNIMNAYARGHTLETLKLEQVMRK-GMEPDN--PLEYAVLSQSMRIVFSTLKLMGEGWSSG 534
+A ++E TFV AC ++G D L FI+ AYE+G+TV AL++E++ CP QTAGRPL ++E+ELRSVWL+LVYLTL R + + ++ S P +F FV +++NA G+TLE+LKLE ++R+ G + ++ +E A+L QSMR+VF TL + E ++G
Sbjct: 61 VAQILEVTFVNACMQLATGYVDT-LKLFIAAALTAYERGFTVNALSLELAQCPQQTAGRPLMQEEVELRSVWLSLVYLTLANVRHESEASESVGASVPAEIRSQFQTFVYDVVNAAQGGYTLESLKLEDMLRRQGTDSESLGAVEKAILGQSMRVVFLTLTVRDEAAAAG 229
BLAST of mRNA_S-ischiensis_contig80.19817.1 vs. uniprot
Match: A0A7S3B6A2_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3B6A2_9EUKA) HSP 1 Score: 128 bits (321), Expect = 2.530e-33 Identity = 73/177 (41.24%), Postives = 103/177 (58.19%), Query Frame = 1
Query: 16 SPGNGGPEGTELAPLIESTFVLACSSGD---YDMGLNSFISVVKQAYEQGYTVPALTMEVSMCPNQTAGRPLQRDEIELRSVWLALVYLTLEKARWPQKKAR--ALEISAPFMDKFSEFVDNIMNAYARGHTLETLKLEQVMRKGMEPD----NPLEYAVLSQSMRIVFSTLKLMGE 519
SP + GP + IE+TFV A S + Y+ L FI + AY++G TVPAL +E+SMC TAGRPLQ +EI+LRSVWL+LVYLT E+ + ++A KF F +I+NA +G+ L LKLE++++ E P+E AVLSQ+MRI + ++ E
Sbjct: 57 SPEDAGPPPSPSTLAIEATFVQAASGANGANYEFSLMEFIRATRDAYDEGITVPALNLELSMCKQYTAGRPLQPEEIDLRSVWLSLVYLTFERVGYASSTGTFPGESVAADLRQKFYTFTYDIVNAKKQGYDLAGLKLEEILQSSEEKSATERTPMEQAVLSQAMRICYLAIQAAEE 233
BLAST of mRNA_S-ischiensis_contig80.19817.1 vs. uniprot
Match: A0A7S0F2H4_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0F2H4_9EUKA) HSP 1 Score: 127 bits (320), Expect = 5.340e-33 Identity = 73/173 (42.20%), Postives = 100/173 (57.80%), Query Frame = 1
Query: 19 PGNGGPEGTELAPLIESTFVLACSS---GDYDMGLNSFISVVKQAYEQGYTVPALTMEVSMCPNQTAGRPLQRDEIELRSVWLALVYLTLEKARWPQKKARAL---EISAPFMDKFSEFVDNIMNAYARGHTLETLKLEQVMRKGMEPDNPLEYAVLSQSMRIVFSTLKLMGE 519
P + GP + IE+ FV A S +Y+ GL FI + AY++G VPAL +E+SMC TAGRPLQ DEIELR+VWL+LVYLT E+ + K ++ KF F +I+NA +G L LKLE+V++ E P+E AVLSQ+MRI + ++ E
Sbjct: 78 PKDAGPPASPTTLAIEAAFVQAASGMSGANYEFGLMEFIRATRDAYDEGVMVPALNLELSMCQQYTAGRPLQSDEIELRTVWLSLVYLTFERVGYESKSTGGFLGQSVAEDLRQKFYTFTYDIVNAKKQGFDLAGLKLEEVLQSDEERP-PMEQAVLSQAMRICYLAIQATEE 249
BLAST of mRNA_S-ischiensis_contig80.19817.1 vs. uniprot
Match: A0A0G4EGE9_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EGE9_VITBC) HSP 1 Score: 117 bits (293), Expect = 1.060e-28 Identity = 71/191 (37.17%), Postives = 101/191 (52.88%), Query Frame = 1
Query: 46 ELAPLIESTFVLACSSGD--YDMGLNSFISVVKQAYEQGYTVPALTMEVSMCPNQTAGRPL-------------------------------QRDEIELRSVWLALVYLTLEKARWPQKKARALEISAPFMDKFSEFVDNIMNAYARGHTLETLKLEQVM-RKGMEP-DNPLEYAVLSQSMRIVFSTLKLM 513
E+A IE F+ ACS D Y L FI V AYE+G+ +PAL +EVS + RPL Q DE ELR++W++L++LTL+ WPQ + ++S F +KFS FV N++ A+ RG L LKLE+++ R G + P+E A+L QSMRI+F TL ++
Sbjct: 13 EVAEAIEKAFIAACSRTDLDYQETLRQFIRPVITAYEKGFNMPALLLEVSTVDKPSIERPLMVGEVTWVTDVPASLTRVHDRLFAFLCHGLCQPDEAELRTIWMSLIFLTLQTVGWPQLRESPSQLSISFEEKFSPFVANVVEAHRRGFDLRRLKLEEMISRTGSDKVRTPIEQAMLQQSMRIIFLTLSIL 203
BLAST of mRNA_S-ischiensis_contig80.19817.1 vs. uniprot
Match: A0A7S0I0A6_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0I0A6_9EUKA) HSP 1 Score: 100 bits (248), Expect = 2.630e-22 Identity = 60/163 (36.81%), Postives = 95/163 (58.28%), Query Frame = 1
Query: 43 TELAPLIESTFVLAC---SSGDYDMGLNSFISVVKQAYEQGYTVPALTMEVSMCPNQTAGRPLQRDEIELRSVWLALVYLTLEKARWPQKKARALE-ISAPFMDKFSEFVDNIMNAYARGHTLETLKLEQVMRKGMEPDNPLEYAVLSQSMRIVFSTLKLMGE 519
T +A ++E++FV AC + G D L FI K +E G T+ ++ + C QTAGRPL +E+ELR +W+ LVY TL P K A E + A +K++ V+ ++ A+ +G L +L+L + ++ P + +E AVLSQSMR++F TL ++ E
Sbjct: 64 TTVADMLEASFVRACMDLAKGLVDT-LKLFIVAAKAGFEIGSTIEEVSSGLEACERQTAGRPLMPEELELRHLWVCLVYQTLAFVDHPTKVADVGETVGAELREKYAPLVEGVVVAHVQGRDLPSLQLSEFLQP--VPTDAVEKAVLSQSMRLIFLTLVVLKE 223
BLAST of mRNA_S-ischiensis_contig80.19817.1 vs. uniprot
Match: A0A7S3ADU1_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3ADU1_9EUKA) HSP 1 Score: 91.3 bits (225), Expect = 8.780e-20 Identity = 59/135 (43.70%), Postives = 80/135 (59.26%), Query Frame = 1
Query: 34 PEGTELAPLIESTFVLAC---SSGDYDMGLNSFISVVKQAYEQGYTVPALTMEVSMCPNQTAGRPLQRDEIELRSVWLALVYLTLEKARWPQKKARALEISAPF-MDKFSEFVDNIMNAYARGHTLETLKLEQVM 426
P+ A +IE TFV AC S+G D L FI VK A+ G T+PA+ E+S C +TAGR L +E+ELRS+WL LV LTLE + A E P + K++EFV N++ A RG L+ LKLE+++
Sbjct: 32 PKPPSPAEMIECTFVRACMDLSTGQVDT-LKLFIVSVKAAFLNGATIPAVERELSECAQETAGRALLPEEVELRSLWLCLVSLTLEAIG---RGGTADEAGVPSEICKYAEFVRNVVGAKERGAELKALKLEELL 162
BLAST of mRNA_S-ischiensis_contig80.19817.1 vs. uniprot
Match: A0A7S0BPT7_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BPT7_9RHOD) HSP 1 Score: 84.7 bits (208), Expect = 1.670e-16 Identity = 64/202 (31.68%), Postives = 102/202 (50.50%), Query Frame = 1
Query: 22 GNGGPEGTELAPLIESTF------VLACSSGD-YDMGLNSFISVVKQAYEQGYTVPALTMEVSMCPNQTAGR---------PLQRDEIELRSVWLALVYLTLEKARWPQKKARALEISAPFMDKFSEFVDNIMNAYARGHTLETLKLE-QVMRKGMEPDNPLEYA-VLSQSMRIVFSTLKLMGEGWSSG*RKDACVGGVGNA 573
G G T ++ +I+ +F +L G+ Y++ L SFI V AY++G+++PAL ME+SM + G L +E + R VW+ LVYL L+K R+P + + VD + AY +G + + LK+E + R+ +P+ + A + SQ MRIVF T +L+ + RKD GG+G A
Sbjct: 50 GKGDDVSTTISKVIDGSFRKVWFVLLTKGLGEPYNLALQSFILGVMAAYKKGFSIPALQMEISMAKDIYEGPNAEEINKFIQLTENEKKTRYVWIVLVYLALQKLRFPSENKNMTVPKDELVPSLQGLVDEVSEAYKKGFSFDGLKMEISLNRQPGQPEISADAASIRSQWMRIVFITNQLVASNQAD--RKDP-KGGIGPA 248 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig80.19817.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig80.19817.1 >prot_S-ischiensis_contig80.19817.1 ID=prot_S-ischiensis_contig80.19817.1|Name=mRNA_S-ischiensis_contig80.19817.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=144bp MGLNSFISVVKQAYEQGYTVPALTMEVSMCPNQTAGRPLQRDEIELRSVWback to top mRNA from alignment at S-ischiensis_contig80:175145..178470+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig80.19817.1 ID=mRNA_S-ischiensis_contig80.19817.1|Name=mRNA_S-ischiensis_contig80.19817.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=3326bp|location=Sequence derived from alignment at S-ischiensis_contig80:175145..178470+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig80:175145..178470+ >mRNA_S-ischiensis_contig80.19817.1 ID=mRNA_S-ischiensis_contig80.19817.1|Name=mRNA_S-ischiensis_contig80.19817.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=864bp|location=Sequence derived from alignment at S-ischiensis_contig80:175145..178470+ (Schizocladia ischiensis KU_0333)back to top |