mRNA_S-ischiensis_contig8.19790.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig8.19790.1
Unique NamemRNA_S-ischiensis_contig8.19790.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
BLAST of mRNA_S-ischiensis_contig8.19790.1 vs. uniprot
Match: A0A7S2BV73_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BV73_9STRA)

HSP 1 Score: 140 bits (353), Expect = 5.120e-34
Identity = 81/168 (48.21%), Postives = 106/168 (63.10%), Query Frame = 1
Query:   97 IQPRGSLTRPFSVAIVGGGPAGFALLVRATRLGHLEELLNGGSDEDASETSAKGVAILERGSEEELGCGTLRHYQINSNTHASKFVVNVTSDRPDSLPPEMATGTPLESLRQSPSARMLEELGTDPAPLPLVGKFLGEVGQVLARQLRAHPESAIMNNCTVISATLLD 600
            +  RGS+  PF + IVGGGPAG A++VRA RLG L+ELL      D +  +  GV ++E G  ++LG G L  Y I SNT+A+ FV NV  DR + +PPEMATGT LE LR +P+A +LE+ G   APL  VG+FL EVG+V+   L  H ES  + N TV     +D
Sbjct:    2 VTTRGSIAAPFKLVIVGGGPAGTAVIVRAIRLGVLDELLG----PDPANGALAGVLLVEAGPSKKLGSGQLGKYLIRSNTNANNFVKNVVHDRLEMVPPEMATGTVLEPLRDTPAAGILEKAGATIAPLEQVGEFLEEVGKVVRSVLIEHGESECLCNTTVSEVRRMD 165          
BLAST of mRNA_S-ischiensis_contig8.19790.1 vs. uniprot
Match: A0A0P1A6C6_PLAHL (L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A6C6_PLAHL)

HSP 1 Score: 122 bits (307), Expect = 1.060e-26
Identity = 100/338 (29.59%), Postives = 140/338 (41.42%), Query Frame = 1
Query:  127 FSVAIVGGGPAGFALLVRATRLGHLEELLNG---GSDEDAS-----ETSAKGVAILERGSEEELGCGTLRHYQINSNTHASKFVVNVTSDRPDSLPPEMATGTPLESLRQSPSARMLEELGTDPAPLPLVGKFLGEVGQVLARQL--RAHPESAIMNNCTVISATLLDRPQPAPATSGGDSRGDPPASGETGGQERSRAEKSGGQPAEAGVDPSCKGVETDGKRVLWRLLVECPRSRLRSRNSIARTHQVDTMQTGPTVRFYVYTVRVVMATGGCQEVPRMPTRAHQEKTLVSDFVLTREGLKVLQQRLQSLPQPNKARLCVVGGSHSCFSVVWTCLN 1110
            +   IVGGGPAG  + +RA R G+L  LL+    G+ +D       +    GVA+L  G+    G G L  Y INSNT A   + ++  ++ +  PPE    T LE LR   SA+ LEELG  P  L  +G FL  VG  L R++  +A   S ++ + T   AT  +  Q                                                                      N +   H   T   G      +YT  +++ATGG QE+P +   A+  K   SD  L  EG   L++ L +LP P + ++C+VGGSHS FSV W  LN
Sbjct:    8 YKAVIVGGGPAGIGIFIRAARTGYLPRLLDPKKYGTTKDNELSNLLKVEQMGVAVLHDGNSNTFGGGNLGEYIINSNTFACSLLASILDEKSELDPPESIKNTFLEGLRTHVSAKRLEELGAAPGKLTEMGCFLRHVGACLVREISGKACDTSKVLYDTT---ATKFEAQQ----------------------------------------------------------------------NGLICVHTRST--NGSAAATVLYTEHLILATGGTQELPSLDNLAYHSKLFTSDSCLREEGFAKLKRHLLALP-PGERKVCIVGGSHSSFSVAWLLLN 269          
BLAST of mRNA_S-ischiensis_contig8.19790.1 vs. uniprot
Match: A0A662XTQ1_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XTQ1_9STRA)

HSP 1 Score: 122 bits (305), Expect = 2.480e-26
Identity = 102/367 (27.79%), Postives = 155/367 (42.23%), Query Frame = 1
Query:  127 FSVAIVGGGPAGFALLVRATRLGHLEELLNG---GSDEDASETSA-----KGVAILERGSEEELGCGTLRHYQINSNTHASKFVVNVTSDRPDSLPPEMATGTPLESLRQSPSARMLEELGTDPAPLPLVGKFLGEVGQVLARQLRAH-PESA-IMNNCTVISATLLDRPQPAPATSGGDSRGDPPASGETGGQERSRAEKSGGQPAEAGVDPSCKGVETDGKRVLWRLLVECPRSRLRSRNSIARTHQVDTMQTGPTVRFYVYTVRVVMATGGCQEVPRMPTRAHQEKTLVSDFVLTREGLKVLQQRLQSLPQPNKARLCVVGGSHSCFSVVWTCLNLIHPASSPSGSSAAPAEPSWKLALCTEGK 1197
            + + IVGGGPAG  +L+RA R G L  LLN    G  +D   +S      KGVA+L  G  +  G G L  Y INSNT A   + ++  ++P+  PPE    T LE +R+  S++ L+E+G  PA L   G+FL  VG  + +++  + PES+  + N       +L+                                                                         N + R     T  +G TV   ++T  + +A GG QE P +   A+  K   +D  L  +G   L+Q L + P   + ++C+VGGSHS FSV W  LN +    + + +S +PA  +      TEG+
Sbjct:  205 YKLVIVGGGPAGVGVLIRAARTGFLPRLLNPELQGIKKDLEFSSQLGLKQKGVAMLHAGDAKTFGSGNLGAYVINSNTFARSLLASILDEKPELDPPESIKNTFLERVREDESSKRLDEIGAAPASLVEFGRFLNHVGSCVLKEITCNAPESSKCLLNTAATKFEVLE-------------------------------------------------------------------------NGLIRVEAQSTNGSGETV--VLHTEHLALAMGGMQETPSLDNPAYHSKLFTTDACLREDGFAKLKQHLLAQPTGER-KVCIVGGSHSSFSVAWLLLNKLGEPKNVAVTSKSPAITNSSEEQSTEGQ 495          
BLAST of mRNA_S-ischiensis_contig8.19790.1 vs. uniprot
Match: A0A3R7D5A8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R7D5A8_9STRA)

HSP 1 Score: 120 bits (301), Expect = 3.750e-26
Identity = 112/347 (32.28%), Postives = 151/347 (43.52%), Query Frame = 1
Query:  127 FSVAIVGGGPAGFALLVRATRLGHLEELLNGGSDEDASETSAKGVAILERGSEEELGCGTLRHYQINSNTHASKFVVNVTSDRPDSLPPEMATGTPLESLRQSPSARMLEELGTDPAPLPLVGKFLGEVGQVLARQLRAHPESAIMNNCTVISATL-LDRPQPAPATSGGDSRGDPPASGETGGQERSRAEKSGGQPAEAGVDPSCKGVETDGKRVLWRLLVECPRSRLRSRNSIARTHQVDTMQTGPTVRFYVYTVRVVMATGGCQEVPRMPTRAHQ-EKTLVSDFVLTREGLKVLQQRLQSLPQPNKARLCVVGGSHSCFSVVWTCLNLIHPASSPSGSSAAPAE 1161
            + +AI+GGGPAG  +LVRA RLG L +LL         + S +GVA++  GS + LG G L  Y INSNT A   V +V  ++ D  PPE   GT L +L   P+A+ L + G     L  +GKFLG VGQ    ++  + ES+    C V +  L ++R   AP                                                     R LVE         NS        T+Q+       ++   VV+A GG Q +P     A Q  KT +SD VL   G   L + L + PQ    ++C+VGGSHS FSV WT L       S SG + AP +
Sbjct:    8 YKLAILGGGPAGVGILVRAARLGLLPQLLQ------PPDKSMRGVALVHGGSVDTLGVGNLGDYIINSNTFAKSLVTSVLEEKLDLDPPESVQGTFLATLATHPTAKRLMDAGNVTIALGELGKFLGAVGQQARLEMLKYTESS---TCFVNTTALRVERVATAPPND--------------------------------------------------RALVE---------NSKPPHVCKITIQSNGGAPTCIFAENVVLAMGGKQALPTSDLTASQLTKTWLSDHVLRDPGRVALAKVLAAAPQK---KVCIVGGSHSAFSVAWTLLQKQPKDKSVSGVTFAPKD 283          
BLAST of mRNA_S-ischiensis_contig8.19790.1 vs. uniprot
Match: A0A6A4Z7N2_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z7N2_9STRA)

HSP 1 Score: 117 bits (294), Expect = 3.990e-26
Identity = 102/328 (31.10%), Postives = 143/328 (43.60%), Query Frame = 1
Query:  127 FSVAIVGGGPAGFALLVRATRLGHLEELLNGGSDEDASETSAKGVAILERGSEEELGCGTLRHYQINSNTHASKFVVNVTSDRPDSLPPEMATGTPLESLRQSPSARMLEELGTDPAPLPLVGKFLGEVGQVLARQLRAHPESAIMNNCTVISATLLDRPQPAPATSGGDSRGDPPASGETGGQERSRAEKSGGQPAEAGVDPSCKGVETDGKRVLWRLLVECPRSRLRSRNSIARTHQVDTMQTGPTVRFYVYTVRVVMATGGCQEVPRMPTRAHQ-EKTLVSDFVLTREGLKVLQQRLQSLPQPNKARLCVVGGSHSCFSVVWTCL 1107
            + +AI+GGGPAG  +LVRA RLG L +LL         + + +GVA++  G  E LG G L  Y INSNT+A   V +V  ++P+  PPE   GT L +L    +A  L + G     L  +GKFLG VGQ    ++  +  S+    C V +  L  R +   AT+                                   PS  G   + K                  + + +     T+Q        ++   VV+A GG Q +P     A Q  KT +SD VL   G  +L   L + PQ    ++C+VGGSHS FSV WT L
Sbjct:    9 YKLAILGGGPAGIGILVRAARLGLLPQLLQ------PPDNATRGVALIHGGPVETLGVGNLGDYIINSNTYAKSLVTSVLEEKPELDPPESVQGTFLANLATHATATRLMDAGNTTIALAELGKFLGAVGQEARLEMLKYTASS---TCYVNTTAL--RVERIVATA-----------------------------------PSVDGSSVEPKT-----------------SHVCKI----TIQPAGGTAMCIFAESVVLAMGGKQSLPTTDLSASQLAKTWLSDAVLREPGRGMLASALAAAPQK---KVCIVGGSHSAFSVAWTLL 266          
BLAST of mRNA_S-ischiensis_contig8.19790.1 vs. uniprot
Match: W2Q2E4_PHYPN (Pyr_redox_2 domain-containing protein n=2 Tax=Phytophthora parasitica TaxID=4792 RepID=W2Q2E4_PHYPN)

HSP 1 Score: 119 bits (298), Expect = 5.590e-26
Identity = 95/338 (28.11%), Postives = 135/338 (39.94%), Query Frame = 1
Query:  127 FSVAIVGGGPAGFALLVRATRLGHLEELLNGGSDEDASETSAK--------GVAILERGSEEELGCGTLRHYQINSNTHASKFVVNVTSDRPDSLPPEMATGTPLESLRQSPSARMLEELGTDPAPLPLVGKFLGEVGQVLARQL--RAHPESAIMNNCTVISATLLDRPQPAPATSGGDSRGDPPASGETGGQERSRAEKSGGQPAEAGVDPSCKGVETDGKRVLWRLLVECPRSRLRSRNSIARTHQVDTMQTGPTVRFYVYTVRVVMATGGCQEVPRMPTRAHQEKTLVSDFVLTREGLKVLQQRLQSLPQPNKARLCVVGGSHSCFSVVWTCLN 1110
            +   +VGGGPAG  + VRA R G L  LLN        +T           GV +L  G  E  G G L  Y INSNT A   + +V  ++PD  PPE    T LE +R   SA+ LEE+G  P  L  +G+FL  VG  L  ++  +A   S ++ +   +    L+                                                                         N + R     T  +G TV   ++T  +++A GG QE+P +   A+  K   SD  L  +G   L++ L +LP   + ++C+VGGSHS FSV W  LN
Sbjct:    8 YKAVVVGGGPAGIGVFVRAARGGLLPRLLNPDKHGTTKDTELSTQLGFKQMGVVVLHSGGAETFGGGNLGEYIINSNTFACGLLASVLDEKPDLDPPESIKNTFLEKVRVHESAKRLEEIGAAPGNLTEIGRFLRRVGACLIEEISDKASDTSKVLLHTAAVKYEALE-------------------------------------------------------------------------NGLIRVKAQRTNGSGDTV--ILHTEHLILAMGGTQELPSLDNPAYHSKLFASDSCLREDGFAKLKEHLLALPTGER-KVCIVGGSHSSFSVAWLLLN 269          
BLAST of mRNA_S-ischiensis_contig8.19790.1 vs. uniprot
Match: A0A024U854_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U854_9STRA)

HSP 1 Score: 120 bits (301), Expect = 6.710e-26
Identity = 112/347 (32.28%), Postives = 151/347 (43.52%), Query Frame = 1
Query:  127 FSVAIVGGGPAGFALLVRATRLGHLEELLNGGSDEDASETSAKGVAILERGSEEELGCGTLRHYQINSNTHASKFVVNVTSDRPDSLPPEMATGTPLESLRQSPSARMLEELGTDPAPLPLVGKFLGEVGQVLARQLRAHPESAIMNNCTVISATL-LDRPQPAPATSGGDSRGDPPASGETGGQERSRAEKSGGQPAEAGVDPSCKGVETDGKRVLWRLLVECPRSRLRSRNSIARTHQVDTMQTGPTVRFYVYTVRVVMATGGCQEVPRMPTRAHQ-EKTLVSDFVLTREGLKVLQQRLQSLPQPNKARLCVVGGSHSCFSVVWTCLNLIHPASSPSGSSAAPAE 1161
            + +AI+GGGPAG  +LVRA RLG L +LL         + S +GVA++  GS + LG G L  Y INSNT A   V +V  ++ D  PPE   GT L +L   P+A+ L + G     L  +GKFLG VGQ    ++  + ES+    C V +  L ++R   AP                                                     R LVE         NS        T+Q+       ++   VV+A GG Q +P     A Q  KT +SD VL   G   L + L + PQ    ++C+VGGSHS FSV WT L       S SG + AP +
Sbjct:    8 YKLAILGGGPAGVGILVRAARLGLLPQLLQ------PPDKSMRGVALVHGGSVDTLGVGNLGDYIINSNTFAKSLVTSVLEEKLDLDPPESVQGTFLATLATHPTAKRLMDAGNVTIALGELGKFLGAVGQQARLEMLKYTESS---TCFVNTTALRVERVATAPPND--------------------------------------------------RALVE---------NSKPPHVCKITIQSNGGAPTCIFAENVVLAMGGKQALPTSDLTASQLTKTWLSDHVLRDPGRVALAKVLAAAPQK---KVCIVGGSHSAFSVAWTLLQKQPKDKSVSGVTFAPKD 283          
BLAST of mRNA_S-ischiensis_contig8.19790.1 vs. uniprot
Match: A0A662XZJ0_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XZJ0_9STRA)

HSP 1 Score: 120 bits (301), Expect = 1.040e-25
Identity = 101/367 (27.52%), Postives = 153/367 (41.69%), Query Frame = 1
Query:  127 FSVAIVGGGPAGFALLVRATRLGHLEELLNG---GSDEDASETSA-----KGVAILERGSEEELGCGTLRHYQINSNTHASKFVVNVTSDRPDSLPPEMATGTPLESLRQSPSARMLEELGTDPAPLPLVGKFLGEVGQVLARQLRAH-PESA-IMNNCTVISATLLDRPQPAPATSGGDSRGDPPASGETGGQERSRAEKSGGQPAEAGVDPSCKGVETDGKRVLWRLLVECPRSRLRSRNSIARTHQVDTMQTGPTVRFYVYTVRVVMATGGCQEVPRMPTRAHQEKTLVSDFVLTREGLKVLQQRLQSLPQPNKARLCVVGGSHSCFSVVWTCLNLIHPASSPSGSSAAPAEPSWKLALCTEGK 1197
            + + IVGGGPAG  + +RA R G L  LLN    G  +D   +S      KGVA++  G  +  G G L  Y INSNT A   + ++  ++P+  PPE    T LE +R+  S++ L+E+G  PA L   G+FL  VG  + +++  + PES+  + N       +L+                                                                         N + R     T  +G TV   ++T  + +A GG QE P +   A+  K   +D  L  +G   L+Q L + P   + ++C+VGGSHS FSV W  LN      + + +S +PA  S      TEG+
Sbjct:  652 YKLVIVGGGPAGVGVFIRAARTGFLPRLLNPELQGIKKDLEFSSRLGLKQKGVAMIHAGDAKTFGSGNLGAYVINSNTFARSLLASILDEKPELDPPESIKNTFLEKVREDESSKRLDEVGAAPASLVEFGRFLTHVGSCVLKEITCNAPESSKCLLNTAATKFEVLE-------------------------------------------------------------------------NGLIRVEAQSTNGSGETV--VLHTEHLALAMGGMQETPSLDNPAYHSKLFTTDACLREDGFAKLKQHLLAQPTGER-KVCIVGGSHSSFSVAWLLLNKFGEPKNVAVTSKSPANTSSSEEQSTEGQ 942          
BLAST of mRNA_S-ischiensis_contig8.19790.1 vs. uniprot
Match: V9F0D9_PHYPR (Pyr_redox_2 domain-containing protein n=7 Tax=Phytophthora parasitica TaxID=4792 RepID=V9F0D9_PHYPR)

HSP 1 Score: 119 bits (298), Expect = 1.620e-25
Identity = 95/338 (28.11%), Postives = 135/338 (39.94%), Query Frame = 1
Query:  127 FSVAIVGGGPAGFALLVRATRLGHLEELLNGGSDEDASETSAK--------GVAILERGSEEELGCGTLRHYQINSNTHASKFVVNVTSDRPDSLPPEMATGTPLESLRQSPSARMLEELGTDPAPLPLVGKFLGEVGQVLARQL--RAHPESAIMNNCTVISATLLDRPQPAPATSGGDSRGDPPASGETGGQERSRAEKSGGQPAEAGVDPSCKGVETDGKRVLWRLLVECPRSRLRSRNSIARTHQVDTMQTGPTVRFYVYTVRVVMATGGCQEVPRMPTRAHQEKTLVSDFVLTREGLKVLQQRLQSLPQPNKARLCVVGGSHSCFSVVWTCLN 1110
            +   +VGGGPAG  + VRA R G L  LLN        +T           GV +L  G  E  G G L  Y INSNT A   + +V  ++PD  PPE    T LE +R   SA+ LEE+G  P  L  +G+FL  VG  L  ++  +A   S ++ +   +    L+                                                                         N + R     T  +G TV   ++T  +++A GG QE+P +   A+  K   SD  L  +G   L++ L +LP   + ++C+VGGSHS FSV W  LN
Sbjct:    8 YKAVVVGGGPAGIGVFVRAARGGLLPRLLNPDKHGTTKDTELSTQLGFKQMGVVVLHSGGAETFGGGNLGEYIINSNTFACGLLASVLDEKPDLDPPESIKNTFLEKVRVHESAKRLEEIGAAPGNLTEIGRFLRRVGACLIEEISDKASDTSKVLLHTAAVKYEALE-------------------------------------------------------------------------NGLIRVKAQRTNGSGDTV--ILHTEHLILAMGGTQELPSLDNPAYHSKLFASDSCLREDGFAKLKEHLLALPTGER-KVCIVGGSHSSFSVAWLLLN 269          
BLAST of mRNA_S-ischiensis_contig8.19790.1 vs. uniprot
Match: A0A6G0X2L9_9STRA (Pyr_redox_2 domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X2L9_9STRA)

HSP 1 Score: 114 bits (285), Expect = 3.980e-25
Identity = 100/330 (30.30%), Postives = 140/330 (42.42%), Query Frame = 1
Query:  127 FSVAIVGGGPAGFALLVRATRLGHLEELLNGGSDEDASETSAKGVAILERGSEEELGCGTLRHYQINSNTHASKFVVNVTSDRPDSLPPEMATGTPLESLRQSPSARMLEELGTDPAPLPLVGKFLGEVGQVLAR--QLRAHPESAIMNNCTVISATLLDRPQPAPATSGGDSRGDPPASGETGGQERSRAEKSGGQPAEAGVDPSCKGVETDGKRVLWRLLVECPRSRLRSRNSIARTHQVDTMQTGPTVRFYVYTVRVVMATGGCQEVPRMPTRAHQEKTLVSDFVLTREGLKVLQQRLQSLPQPNKARLCVVGGSHSCFSVVWTCLN 1110
            + +AIVGGGPAG  +LVRA RLG+L +LL        S  ++KGV ++  G  + LGCG L  Y INSNT A   V +V  ++PD  PPE   GT LE L Q  +A+ L + G     LP +GKFL  +G  LAR   L+    S  + N   +S   +                                    G+  E  +    K V    +RV                                     +   RV++ATGG Q +P   +  ++ K  +SD+VL   G   L      L +  + ++C+VGGSHS FSV W  L+
Sbjct:    7 YKLAIVGGGPAGVGVLVRAARLGYLPQLL--------SPAASKGVVLIHGGPVDNLGCGNLGEYIINSNTFAKSLVSSVLEEKPDLDPPESIHGTFLEELTQHAAAKRLMDAGNASIGLPELGKFLAALGS-LARLEMLKYGATSTCLVNTMAVSVARV------------------------------------GEHCEITI----KSVGGGDERV-------------------------------------ILADRVLLATGGHQAMPPELSN-YRSKAFLSDYVLRESGRSELSA---VLAKAKEKKVCIVGGSHSAFSVAWVLLH 246          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19790.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2BV73_9STRA5.120e-3448.21Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A0P1A6C6_PLAHL1.060e-2629.59L-lysine 6-monooxygenase/L-ornithine 5-monooxygena... [more]
A0A662XTQ1_9STRA2.480e-2627.79Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
A0A3R7D5A8_9STRA3.750e-2632.28Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A6A4Z7N2_9STRA3.990e-2631.10Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
W2Q2E4_PHYPN5.590e-2628.11Pyr_redox_2 domain-containing protein n=2 Tax=Phyt... [more]
A0A024U854_9STRA6.710e-2632.28Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A662XZJ0_9STRA1.040e-2527.52Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
V9F0D9_PHYPR1.620e-2528.11Pyr_redox_2 domain-containing protein n=7 Tax=Phyt... [more]
A0A6G0X2L9_9STRA3.980e-2530.30Pyr_redox_2 domain-containing protein n=1 Tax=Apha... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:4001549..4003567 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score128.6
Seed ortholog evalue6e-27
Seed eggNOG ortholog44056.XP_009040783.1
EggNOG OGs2CWT9@1,2RV74@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons5
Model size1206
Cds size1143
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19790.1prot_S-ischiensis_contig8.19790.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig8 4001549..4003504 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817304.6208112-CDS-S-ischiensis_contig8:4001548..40016321622817304.6208112-CDS-S-ischiensis_contig8:4001548..4001632Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 4001549..4001632 -
1695741011.669344-CDS-S-ischiensis_contig8:4001548..40016321695741011.669344-CDS-S-ischiensis_contig8:4001548..4001632Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 4001549..4001632 -
1622817304.6357052-CDS-S-ischiensis_contig8:4001859..40019761622817304.6357052-CDS-S-ischiensis_contig8:4001859..4001976Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 4001860..4001976 -
1695741011.6814733-CDS-S-ischiensis_contig8:4001859..40019761695741011.6814733-CDS-S-ischiensis_contig8:4001859..4001976Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 4001860..4001976 -
1622817304.6485603-CDS-S-ischiensis_contig8:4002316..40028891622817304.6485603-CDS-S-ischiensis_contig8:4002316..4002889Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 4002317..4002889 -
1695741011.6908038-CDS-S-ischiensis_contig8:4002316..40028891695741011.6908038-CDS-S-ischiensis_contig8:4002316..4002889Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 4002317..4002889 -
1622817304.6663024-CDS-S-ischiensis_contig8:4003029..40032571622817304.6663024-CDS-S-ischiensis_contig8:4003029..4003257Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 4003030..4003257 -
1695741011.702522-CDS-S-ischiensis_contig8:4003029..40032571695741011.702522-CDS-S-ischiensis_contig8:4003029..4003257Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 4003030..4003257 -
1622817304.6803536-CDS-S-ischiensis_contig8:4003363..40035041622817304.6803536-CDS-S-ischiensis_contig8:4003363..4003504Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 4003364..4003504 -
1695741011.7147124-CDS-S-ischiensis_contig8:4003363..40035041695741011.7147124-CDS-S-ischiensis_contig8:4003363..4003504Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 4003364..4003504 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817304.6931098-UTR-S-ischiensis_contig8:4003504..40035671622817304.6931098-UTR-S-ischiensis_contig8:4003504..4003567Schizocladia ischiensis KU_0333UTRS-ischiensis_contig8 4003505..4003567 -
1695741011.7266712-UTR-S-ischiensis_contig8:4003504..40035671695741011.7266712-UTR-S-ischiensis_contig8:4003504..4003567Schizocladia ischiensis KU_0333UTRS-ischiensis_contig8 4003505..4003567 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig8.19790.1

>prot_S-ischiensis_contig8.19790.1 ID=prot_S-ischiensis_contig8.19790.1|Name=mRNA_S-ischiensis_contig8.19790.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=381bp
MSSGSTATDSAIQPRGSLTRPFSVAIVGGGPAGFALLVRATRLGHLEELL
NGGSDEDASETSAKGVAILERGSEEELGCGTLRHYQINSNTHASKFVVNV
TSDRPDSLPPEMATGTPLESLRQSPSARMLEELGTDPAPLPLVGKFLGEV
GQVLARQLRAHPESAIMNNCTVISATLLDRPQPAPATSGGDSRGDPPASG
ETGGQERSRAEKSGGQPAEAGVDPSCKGVETDGKRVLWRLLVECPRSRLR
SRNSIARTHQVDTMQTGPTVRFYVYTVRVVMATGGCQEVPRMPTRAHQEK
TLVSDFVLTREGLKVLQQRLQSLPQPNKARLCVVGGSHSCFSVVWTCLNL
IHPASSPSGSSAAPAEPSWKLALCTEGKQVG
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mRNA from alignment at S-ischiensis_contig8:4001549..4003567-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig8.19790.1 ID=mRNA_S-ischiensis_contig8.19790.1|Name=mRNA_S-ischiensis_contig8.19790.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=2019bp|location=Sequence derived from alignment at S-ischiensis_contig8:4001549..4003567- (Schizocladia ischiensis KU_0333)
CCACGCTCGAGATTTTAACTCGGCTCTATACCACGGTCACAGACCGGGGG GGGCGTCCGGGACATGTCAAGTGGTTCAACTGCCACGGACAGTGCCATCC AACCCCGCGGTTCCTTGACACGGCCTTTTAGCGTAGCGATTGTGGGCGGC GGACCCGCCGGTTTCGCCCTGCTGGTCCGGGCTACAAGATTGGGCCATCT TGAGGTATGCAAGGTGTACTGTACACTTGCACCTAGGGAGTGCACGGACA ACCTTCGAGTGGCCAATGTTCTAGGTCGACTGCGCTGTTGTCGTGCTCGA CTATTTGCAGGAGCTCTTGAACGGCGGAAGCGACGAAGATGCGAGCGAAA CGTCTGCCAAGGGTGTCGCCATTTTGGAACGAGGTTCGGAAGAGGAGCTG GGGTGCGGTACTCTTCGGCATTACCAAATAAACAGCAACACCCACGCGTC CAAGTTCGTCGTCAACGTCACGAGTGACAGGCCGGACTCGCTCCCACCTG AGATGGCTACAGGGACGCCCCTGGAGTCACTCCGACAGGCGAGTATACTT TTCGGATGGTCACGGGCGCAGGGTGGCTAAGTACATTTGCATACGCGTGT GGCGGTGCTGGTACCCCCTCCCCAGTATTGCGCTCCGTATGTTCGCTAAT TCCTTGCACGTCTGATTTCCCGTCGCAGAGCCCAAGCGCGAGGATGCTGG AGGAACTAGGTACAGACCCAGCCCCGCTTCCTCTTGTCGGCAAGTTCCTT GGCGAGGTGGGCCAGGTCCTGGCAAGGCAGTTGCGGGCACACCCGGAGAG TGCCATCATGAACAATTGCACCGTTATCTCAGCGACACTGCTAGACAGGC CACAACCTGCACCTGCAACGTCGGGCGGGGACTCAAGGGGAGACCCCCCC GCTTCTGGGGAGACCGGGGGGCAAGAACGTTCCCGTGCAGAGAAGAGCGG AGGGCAGCCCGCGGAGGCTGGAGTAGACCCAAGCTGCAAGGGGGTAGAGA CAGACGGCAAACGGGTGCTGTGGAGGCTCCTGGTAGAATGCCCTCGCAGC AGACTTCGCAGCCGAAACTCGATTGCACGGACACATCAGGTGGATACAAT GCAAACGGGACCGACGGTTCGCTTCTACGTCTACACCGTGCGCGTGGTCA TGGCCACTGGGGGCTGTCAAGAGGTACCGCGGATGCCAACCAGGGCACAC CAGGAGAAAACGCTGGTCTCGGACTTTGTGCTCACACGAGAGGGTCTGAA GGTGTGATTCATACTTCGAAGTATAAATTGTAACGAGGTAGAATCGCACG TGTGTGAGACTGACTGATATAGTACTAGTAGTTGTCTGAAGGTGTGTTCG TGCCATTTGATTGGCAACAACCTTGCCGAGGCAAGTGTCAGACACGTTCC GCCATGTGGTGACCTTGCCAATGCTTGCTACGAGCAGGAGTTTCACGCCC TCGCCACGCCAGCGCTCATACCCTTGCGGCTTGCGCTCAGCCCTCTGCGG GCACGATATACTACCCGTGCACTACTGACCGTGCTTTTGTCCCTGCTGGG AAGTTCAGCCCTTGATTCGACAATGTGTGTATGTCTGGCAGGTGCTGCAG CAGAGGTTACAGAGCCTGCCACAGCCTAACAAGGCCAGGTTGTGCGTTGT AGGCGGAAGCCACAGCTGCTTCTCCGTGGTGTGGACCTGCCTCAACCTGA TTCATCCGGTGAGGGGAATGCTCTAGAAGGGGGTTTGTTTGCTAAAGGAT AGTTCTACAGTACGATAGGATGCACTTCCAGGGGCTCTGGCGACTCTTGT GCCACTGCGGTGCACGTCAATGCGTATCCCTGGGAAAACTTGCGTCATGC CTGCTACCCACAATTCGATGCAATTTGCCATAGTCGACGTCTTCAATGAC AAAGGCCTCAAACTTTGCCGGGTGCCCTGCTGCAGGCGTCGTCACCGAGC GGCTCATCTGCTGCACCAGCGGAGCCATCCTGGAAGCTGGCACTGTGTAC AGAGGGAAAGCAGGTGGGG
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Coding sequence (CDS) from alignment at S-ischiensis_contig8:4001549..4003567-

>mRNA_S-ischiensis_contig8.19790.1 ID=mRNA_S-ischiensis_contig8.19790.1|Name=mRNA_S-ischiensis_contig8.19790.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2286bp|location=Sequence derived from alignment at S-ischiensis_contig8:4001549..4003567- (Schizocladia ischiensis KU_0333)
ATGTCAAGTGGTTCAACTGCCACGGACAGTGCCATCCAACCCCGCGGTTC
CTTGACACGGCCTTTTAGCGTAGCGATTGTGGGCGGCGGACCCGCCGGTT
TCGCCCTGCTGGTCCGGGCTACAAGATTGGGCCATCTTGAGATGTCAAGT
GGTTCAACTGCCACGGACAGTGCCATCCAACCCCGCGGTTCCTTGACACG
GCCTTTTAGCGTAGCGATTGTGGGCGGCGGACCCGCCGGTTTCGCCCTGC
TGGTCCGGGCTACAAGATTGGGCCATCTTGAGGAGCTCTTGAACGGCGGA
AGCGACGAAGATGCGAGCGAAACGTCTGCCAAGGGTGTCGCCATTTTGGA
ACGAGGTTCGGAAGAGGAGCTGGGGTGCGGTACTCTTCGGCATTACCAAA
TAAACAGCAACACCCACGCGTCCAAGTTCGTCGTCAACGTCACGAGTGAC
AGGCCGGACTCGCTCCCACCTGAGATGGCTACAGGGACGCCCCTGGAGTC
ACTCCGACAGGAGCTCTTGAACGGCGGAAGCGACGAAGATGCGAGCGAAA
CGTCTGCCAAGGGTGTCGCCATTTTGGAACGAGGTTCGGAAGAGGAGCTG
GGGTGCGGTACTCTTCGGCATTACCAAATAAACAGCAACACCCACGCGTC
CAAGTTCGTCGTCAACGTCACGAGTGACAGGCCGGACTCGCTCCCACCTG
AGATGGCTACAGGGACGCCCCTGGAGTCACTCCGACAGAGCCCAAGCGCG
AGGATGCTGGAGGAACTAGGTACAGACCCAGCCCCGCTTCCTCTTGTCGG
CAAGTTCCTTGGCGAGGTGGGCCAGGTCCTGGCAAGGCAGTTGCGGGCAC
ACCCGGAGAGTGCCATCATGAACAATTGCACCGTTATCTCAGCGACACTG
CTAGACAGGCCACAACCTGCACCTGCAACGTCGGGCGGGGACTCAAGGGG
AGACCCCCCCGCTTCTGGGGAGACCGGGGGGCAAGAACGTTCCCGTGCAG
AGAAGAGCGGAGGGCAGCCCGCGGAGGCTGGAGTAGACCCAAGCTGCAAG
GGGGTAGAGACAGACGGCAAACGGGTGCTGTGGAGGCTCCTGGTAGAATG
CCCTCGCAGCAGACTTCGCAGCCGAAACTCGATTGCACGGACACATCAGG
TGGATACAATGCAAACGGGACCGACGGTTCGCTTCTACGTCTACACCGTG
CGCGTGGTCATGGCCACTGGGGGCTGTCAAGAGGTACCGCGGATGCCAAC
CAGGGCACACCAGGAGAAAACGCTGGTCTCGGACTTTGTGCTCACACGAG
AGGGTCTGAAGAGCCCAAGCGCGAGGATGCTGGAGGAACTAGGTACAGAC
CCAGCCCCGCTTCCTCTTGTCGGCAAGTTCCTTGGCGAGGTGGGCCAGGT
CCTGGCAAGGCAGTTGCGGGCACACCCGGAGAGTGCCATCATGAACAATT
GCACCGTTATCTCAGCGACACTGCTAGACAGGCCACAACCTGCACCTGCA
ACGTCGGGCGGGGACTCAAGGGGAGACCCCCCCGCTTCTGGGGAGACCGG
GGGGCAAGAACGTTCCCGTGCAGAGAAGAGCGGAGGGCAGCCCGCGGAGG
CTGGAGTAGACCCAAGCTGCAAGGGGGTAGAGACAGACGGCAAACGGGTG
CTGTGGAGGCTCCTGGTAGAATGCCCTCGCAGCAGACTTCGCAGCCGAAA
CTCGATTGCACGGACACATCAGGTGGATACAATGCAAACGGGACCGACGG
TTCGCTTCTACGTCTACACCGTGCGCGTGGTCATGGCCACTGGGGGCTGT
CAAGAGGTACCGCGGATGCCAACCAGGGCACACCAGGAGAAAACGCTGGT
CTCGGACTTTGTGCTCACACGAGAGGGTCTGAAGGTGCTGCAGCAGAGGT
TACAGAGCCTGCCACAGCCTAACAAGGCCAGGTTGTGCGTTGTAGGCGGA
AGCCACAGCTGCTTCTCCGTGGTGTGGACCTGCCTCAACCTGATTCATCC
GGTGCTGCAGCAGAGGTTACAGAGCCTGCCACAGCCTAACAAGGCCAGGT
TGTGCGTTGTAGGCGGAAGCCACAGCTGCTTCTCCGTGGTGTGGACCTGC
CTCAACCTGATTCATCCGGCGTCGTCACCGAGCGGCTCATCTGCTGCACC
AGCGGAGCCATCCTGGAAGCTGGCACTGTGTACAGAGGGAAAGCAGGTGG
GGGCGTCGTCACCGAGCGGCTCATCTGCTGCACCAGCGGAGCCATCCTGG
AAGCTGGCACTGTGTACAGAGGGAAAGCAGGTGGGG
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