mRNA_S-ischiensis_contig8.19746.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig8.19746.1
Unique NamemRNA_S-ischiensis_contig8.19746.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
[Close]
BLAST of mRNA_S-ischiensis_contig8.19746.1 vs. uniprot
Match: A0A6V1TVA9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1TVA9_HETAK)

HSP 1 Score: 251 bits (640), Expect = 7.430e-75
Identity = 141/312 (45.19%), Postives = 194/312 (62.18%), Query Frame = 3 
Query:  195 IKGLVFLQAGEETSVMQFRVEDKDVTRVLSRLQGQGVGVRYGYCDVMQLVGGTAVGPSDFMNLEDDSLTLTPAE------IYKNIATGAAITRDAFILLCISATVSGIGLATNSQVYVVASMLMSPLMGPLVAASFGLATFSRGLFINGWRNVVIMLAATALIGFVQGVVFCPFAESFLWPTSQMTSRGVNVELLFGMLVAMAGGAAMAVSEINRNVPSIVGIGIAASLLPPAVNCGLCLGAITLGPLVVPNITFSEDVYMEIVWGSCLLVMVNVFLIYATAFSVFKMITPLQQFRFQQQESDDLGLALGAS 1112
            I G+V L+A +  S++QFRVE++ V  V + +Q  GVG++YGYCD+M+L  GT VG       + D     P        +YKNI   + +T D   LL  S+ V+GIGLAT++QVYVVASML+SPLMGPL AA+FGLA F R +++ G RN  + L  T  +G   G  F PFAE  +WPT +M  RG++VELLF   VA+AGG A AVSE N NV SIVGI IAAS+LPP VN G+C     +GPL+   +  +   Y +I W S +L++VN+F IY  A  V+     L +F +++ + ++L   +  S
Sbjct:   29 IAGIVELRA-KNASILQFRVENQHVLSVQTLMQKSGVGIKYGYCDIMELAAGTTVGEIAQKTPKKDRGWFRPTPSVLFTTLYKNIEANSYLTLDTLFLLAASSAVAGIGLATDNQVYVVASMLISPLMGPLNAAAFGLAIFDREMYLRGIRNEFLALLLTLALGAALGAGFAPFAEVLIWPTGEMAGRGIHVELLFSGAVAIAGGLAAAVSECNANVSSIVGIAIAASILPPTVNAGMCAAYARVGPLLGHEVHVAA--YYQIAWTSFVLLVVNIFFIYTAAAMVYFSRASLDRFNYKRHDREELAAGINKS 337
[Close]
BLAST of mRNA_S-ischiensis_contig8.19746.1 vs. uniprot
Match: A0A6G0WXB1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WXB1_9STRA)

HSP 1 Score: 233 bits (594), Expect = 4.040e-68
Identity = 128/309 (41.42%), Postives = 191/309 (61.81%), Query Frame = 3 
Query:  156 HEQTVSVLHDDSRIKGLVFLQAGEETSVMQFRVEDKDVTRVLSRLQGQGVGVRYGYCDVMQLVGGTAVGPSD-------------FMNLEDDSLTLTP-AEIYKNIATGAAITRDAFILLCISATVSGIGLATNSQVYVVASMLMSPLMGPLVAASFGLATFSRGLFINGWRNVVIMLAATALIGFVQGVVFCPFAESFLWPTSQMTSRGVNVELLFGMLVAMAGGAAMAVSEINRNVPSIVGIGIAASLLPPAVNCGLCLGAITLGPLVVPNITFSE-DVYMEIVWGSCLLVMVNVFLIYATAFSVFK 1037
            H + V+VL DD +++ +  ++A   +S++ FRVED+++  VL+ LQ  GVGV++G+CDVM L  GT +  +               +    D  T  P AEIY  I     ++RD+  +L IS++++GIGLA +S   VVASML+SPLMGP++  SFG A   R +F+ G  N +  L  T ++G + G+V  P+A+   WPT++M SRG  V L+FG +VA   GA +A++E N N+ S+VG  IAA+LLPP VNCG+CL    +GPL + +   ++ +V+ EI  GS LLV +N+  IY +A  VFK
Sbjct:   13 HRKVVTVLQDDLKLENVTSIEA-RTSSIVTFRVEDEEMQGVLTVLQKLGVGVQFGFCDVMSLTPGTTMSKTKRGKNGQHRLKRGGILQKSSDVGTAIPVAEIYARIEASTTLSRDSIGMLFISSSIAGIGLAGDSSTCVVASMLLSPLMGPILGCSFGYAIRDRNMFLTGLSNELTALVITLMLGMILGIVLAPYADDLKWPTAEMRSRGQAVSLIFGAIVAALSGAGVALAESNANISSVVGTAIAAALLPPTVNCGICLSYAIIGPLFLTDYEVTKKNVFFEIAVGSALLVWINIIFIYLSAVVVFK 320
[Close]
BLAST of mRNA_S-ischiensis_contig8.19746.1 vs. uniprot
Match: H3HAV0_PHYRM (Uncharacterized protein n=20 Tax=Phytophthora TaxID=4783 RepID=H3HAV0_PHYRM)

HSP 1 Score: 231 bits (588), Expect = 4.660e-67
Identity = 128/318 (40.25%), Postives = 197/318 (61.95%), Query Frame = 3 
Query:  156 HEQTVSVLHDDSRIKGLVFLQAGEETSVMQFRVEDKDVTRVLSRLQGQGVGVRYGYCDVMQLVGGTAVGPSD-----------FMNLEDDSLTLTP-AEIYKNIATGAAITRDAFILLCISATVSGIGLATNSQVYVVASMLMSPLMGPLVAASFGLATFSRGLFINGWRNVVIMLAATALIGFVQGVVFCPFAESFLWPTSQMTSRGVNVELLFGMLVAMAGGAAMAVSEINRNVPSIVGIGIAASLLPPAVNCGLCLGAITLGPLVVPNITFSED---VYMEIVWGSCLLVMVNVFLIYATAFSVFKMITPLQQFR 1064
            H + VSVL D+ ++  +  ++A   +S++ FRVED+++  +L++LQ  GVGV++G+CDVM L  GT +   +            +    D  T  P AE+Y +I   + ++RD+ ++L IS++++GIGLA +S  YVVASML+SP+MGP++  +FG A   + LFING  N +  L  T L+G + G    P+A +  WPT++M  RG  ++LLFG +VA   G  +A++E N N+ S+VG+ IAA+LLPP VNCG+C   + +G   V +    E+   V+ EI  GS +L+ +NV LIY TA  VFK I  + QF+
Sbjct:   13 HGKVVSVLQDELKLDNVTSVEA-RTSSIVTFRVEDEEMQAILNKLQRMGVGVQFGFCDVMSLTPGTTMRKRNRSKKKKRSVGRILERNTDVGTAVPVAEMYAHIEANSTLSRDSVMMLLISSSIAGIGLAGDSGTYVVASMLLSPMMGPILGCAFGFALRDKNLFINGMLNELFALTITFLLGIMIGAFLSPYAVALNWPTAEMRERGQAIQLLFGAIVAALSGTGVALAESNANISSVVGVAIAAALLPPTVNCGICFSYVMIGQYFVTDDIIGEEQKLVFYEIAVGSLMLLWINVVLIYVTAVLVFK-IKKVDQFQ 328
[Close]
BLAST of mRNA_S-ischiensis_contig8.19746.1 vs. uniprot
Match: A0A485K6I1_9STRA (Aste57867_1945 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K6I1_9STRA)

HSP 1 Score: 229 bits (583), Expect = 1.570e-66
Identity = 128/308 (41.56%), Postives = 188/308 (61.04%), Query Frame = 3 
Query:  156 HEQTVSVLHDDSRIKGLVFLQAGEETSVMQFRVEDKDVTRVLSRLQGQGVGVRYGYCDVMQLVGGTAVGP------------SDFMNLEDDSLTLTP-AEIYKNIATGAAITRDAFILLCISATVSGIGLATNSQVYVVASMLMSPLMGPLVAASFGLATFSRGLFINGWRNVVIMLAATALIGFVQGVVFCPFAESFLWPTSQMTSRGVNVELLFGMLVAMAGGAAMAVSEINRNVPSIVGIGIAASLLPPAVNCGLCLGAITLGPLVVPNITFSE-DVYMEIVWGSCLLVMVNVFLIYATAFSVFK 1037
            H + V+VL DD +++ +  ++A   +S++ FRVED+++  VL+ LQ  GVGV++G+CDVM L  GT++                 M    D  T  P AEIY +I +   ++RD+  +L IS++++GIGLA +S   VVASML+SPLMGP++  SFG A   R +F+NG  N +  L           +V  P+A+   WPT++M SRG  V L+FG +VA   GA +A++E N N+ S+VG  IAA+LLPP VNCG+CL    +GPL +P+   ++ +V+ EI  GS LLV +N+  IY  A  VFK
Sbjct:   13 HRKVVTVLQDDLKLENVTSIEA-RTSSIVTFRVEDEEMQGVLTVLQKMGVGVQFGFCDVMSLTPGTSISKIKRTKSGQVRLKRGIMQKSSDVGTAIPVAEIYAHIESSTTLSRDSIGMLFISSSIAGIGLAGDSPTCVVASMLLSPLMGPILGCSFGYAIRDRNMFLNGLSNELTALVIXXXXXXXXXIVLAPYADDLKWPTAEMRSRGQVVSLIFGAIVAALSGAGVALAESNANISSVVGTAIAAALLPPTVNCGICLSYAVIGPLFLPDYEETKKNVFFEIAVGSALLVWINIIFIYIAAVLVFK 319
[Close]
BLAST of mRNA_S-ischiensis_contig8.19746.1 vs. uniprot
Match: A0A225WWU1_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WWU1_9STRA)

HSP 1 Score: 228 bits (582), Expect = 3.570e-66
Identity = 130/317 (41.01%), Postives = 198/317 (62.46%), Query Frame = 3 
Query:  156 HEQTVSVLHDDSRIKGLVFLQAGEETSVMQFRVEDKDVTRVLSRLQGQGVGVRYGYCDVMQLVGGTAVGPSDFMN--------LEDDSL--TLTP-AEIYKNIATGAAITRDAFILLCISATVSGIGLATNSQVYVVASMLMSPLMGPLVAASFGLATFSRGLFINGWRNVVIMLAATALIGFVQGVVFCPFAESFLWPTSQMTSRGVNVELLFGMLVAMAGGAAMAVSEINRNVPSIVGIGIAASLLPPAVNCGLCLGAITLGPLVVPNITFSED---VYMEIVWGSCLLVMVNVFLIYATAFSVFKMITPLQQFR 1064
            H + VSVL D+ ++  +  ++A   +S++ FRVED ++  +L++LQ  GVGV++G+CDVM L  GT +               LE ++   T  P AE+Y +I   + ++RD+ ++L IS++++GIGLA +S  YVVASML+SP+MGP+V  +FG A   + LFING  N +  L  T L+G + G    P+A +  WPT++M  RG  ++LLFG +VA   G A+A++E N N+ S+VG+ IAA+LLPP+VN G+C   + +G   V +    E+   V+ EI  GS +L+ +NV LIY TA  VFK I  + QF+
Sbjct:   13 HGKVVSVLQDELKLDNVTSVEA-RTSSIVTFRVEDDEMQAILNKLQRMGVGVQFGFCDVMSLTPGTTMRSHSHSKKKCSVGRILERNTAVGTAVPVAEMYAHIEANSTLSRDSVVMLLISSSIAGIGLAGDSGTYVVASMLLSPMMGPIVGCAFGFALRDKHLFINGMLNELFALTVTFLLGIMIGAFLSPYAVTLNWPTAEMRERGQAIQLLFGAIVAALSGTAVALAESNANISSVVGVAIAATLLPPSVNSGICFSYVMIGQYFVTDDVIGEEQKLVFYEIAVGSLMLLWINVVLIYVTAVLVFK-IKKVDQFQ 327
[Close]
BLAST of mRNA_S-ischiensis_contig8.19746.1 vs. uniprot
Match: A0A8K1CGX4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CGX4_PYTOL)

HSP 1 Score: 223 bits (569), Expect = 1.810e-64
Identity = 125/302 (41.39%), Postives = 184/302 (60.93%), Query Frame = 3 
Query:  174 VLHDDSRIKGLVFLQAGEETSVMQFRVEDKDVTRVLSRLQGQGVGVRYGYCDVMQLVGGTAVGPSD----------FMNLEDDSLTLTP-AEIYKNIATGAAITRDAFILLCISATVSGIGLATNSQVYVVASMLMSPLMGPLVAASFGLATFSRGLFINGWRNVVIMLAATALIGFVQGVVFCPFAESFLWPTSQMTSRGVNVELLFGMLVAMAGGAAMAVSEINRNVPSIVGIGIAASLLPPAVNCGLCLGAITLGPLVVPNITFSED---VYMEIVWGSCLLVMVNVFLIYATAFSVFK 1037
            +L DD ++  +  ++A   +S++ FRVED  +  +L++L   GVGV++G+CDVM L  GTA+               +    +  T  P AE+Y +I   A ++RD+  +L IS+ V+GIGLA +S  YVVASML+SPLMGP++  +FG     R LFING+ N +  L  T L+G + G V  P+A +  WPTS+M SRG  ++LLFG +VA   GA +A++E N N+ S+VGI IAA+LLPP VN G+C   + LG   V +    E+   ++ EI  GS +L+ +N+  IY +A  VFK
Sbjct:    1 MLQDDWKLDNVTSVEA-RTSSIVTFRVEDDQMQAILTKLHSIGVGVQFGFCDVMSLTPGTALSKQTHAKKKRRVGRILERSTEIGTAVPVAEMYAHIEANATLSRDSIGMLLISSAVAGIGLAADSGTYVVASMLLSPLMGPIIGCAFGFVLRDRNLFINGFLNELFALTITLLLGMIIGAVLSPYAAALNWPTSEMRSRGQAIQLLFGAIVAALSGAGVALAESNANISSVVGIAIAAALLPPTVNAGICTSYVILGQYFVSDDVLGEEQKLIFYEIAVGSGMLLWINIVFIYFSAVVVFK 301
[Close]
BLAST of mRNA_S-ischiensis_contig8.19746.1 vs. uniprot
Match: A0A024U3R8_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U3R8_9STRA)

HSP 1 Score: 215 bits (548), Expect = 4.020e-61
Identity = 124/309 (40.13%), Postives = 182/309 (58.90%), Query Frame = 3 
Query:  156 HEQTVSVLHDDSRIKGLVFLQAGEETSVMQFRVEDKDVTRVLSRLQGQGVGVRYGYCDVMQLVGGTAVGPSD-------------FMNLEDDSLTLTP-AEIYKNIATGAAITRDAFILLCISATVSGIGLATNSQVYVVASMLMSPLMGPLVAASFGLATFSRGLFINGWRNVVIMLAATALIGFVQGVVFCPFAESFLWPTSQMTSRGVNVELLFGMLVAMAGGAAMAVSEINRNVPSIVGIGIAASLLPPAVNCGLCLGAITLGPLVVPNITFSE-DVYMEIVWGSCLLVMVNVFLIYATAFSVFK 1037
            H + V+VL DD  ++ +  ++A   +S++ FRVED+++  VL+ LQ  GVGV++G+CDVM L  GT +  +               +    D  T  P AEIY +I     ++RD+  +L IS++++GIGLA +S   VVASML+SPLMG     SFG A   R +F+NG  N +  L           +V  P+A+   WPT++M SRG  V L+FG +VA   GA +A++E N N+ S+VG  IAA+LLPP VNCG+ L    +GPL + +   ++ +V+ EI  GS LLV +N+  IY +A  VFK
Sbjct:   13 HRKVVTVLQDDLNLENVTSIEA-RTSSIVSFRVEDEEMQGVLTVLQKLGVGVKFGFCDVMSLTPGTTISKAKKTKNGSSSRPRRGILQKSSDVGTAIPVAEIYAHIEASTTLSRDSIGMLFISSSIAGIGLAGDSPTCVVASMLLSPLMGXXXGCSFGYAIRDRNMFLNGLSNELTALXXXXXXXXXXXIVLAPYADDLKWPTAEMRSRGQAVSLIFGAIVAALSGAGVALAESNANISSVVGTAIAAALLPPTVNCGISLSYAIIGPLFLTDYEVTKKNVFFEIAVGSALLVWINIIFIYLSAVVVFK 320
[Close]
BLAST of mRNA_S-ischiensis_contig8.19746.1 vs. uniprot
Match: K3WKC6_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WKC6_GLOUD)

HSP 1 Score: 210 bits (535), Expect = 3.060e-59
Identity = 120/308 (38.96%), Postives = 179/308 (58.12%), Query Frame = 3 
Query:  156 HEQTVSVLHDDSRIKGLVFLQAGEETSVMQFRVEDKDVTRVLSRLQGQGVGVRYGYCDVMQLVGGTAVGPSD----------FMNLEDDSLTLTP-AEIYKNIATGAAITRDAFILLCISATVSGIGLATNSQVYVVASMLMSPLMGPLVAASFGLATFSRGLFINGWRNVVIMLAATALIGFVQGVVFCPFAESFLWPTSQMTSRGVNVELLFGMLVAMAGGAAMAVSEINRNVPSIVGIGIAASLLPPAVNCGLCLGAITLGPLVVPNITFSED---VYMEIVWGSCLLVMVNVFLIYATAFSVFK 1037
            H + VS L D+ ++  +  ++A   +S++ FRVED+++  +L++LQ  GVGV++G+CDVM L  GT +               +    D  T  P AE+Y +I   A ++RD+  +L IS+ ++GIGLA +S  YVVASML+SPL           A   R LFING+ N +  L  T L+G + G +  P+A +  WPT++M  RG  ++LLFG +VA   G  +A++E N N+ S+VG  IAA+LLPP VN G+C   + +G   V +    E+   ++ EI  GS +LV +NV  IY TA  VFK
Sbjct:   13 HGKIVSTLQDELKLDNVTSVEA-RTSSIVTFRVEDEEMQAILTKLQSMGVGVQFGFCDVMSLTPGTTIRKHTTKKKKRRVGRILERSTDVGTAVPVAEMYHHIEANATLSRDSVGMLLISSAIAGIGLAGDSSTYVVASMLLSPLXXXXXXXXXXYAIRDRSLFINGFLNEIFALIVTLLLGMMIGALLSPYAAALNWPTNEMRQRGQAIQLLFGAVVAALSGTGVALAESNANISSVVGTAIAAALLPPTVNSGICFSYVIIGQYFVNDDVIGEEQRLIFYEIAVGSAMLVWINVIFIYFTAVLVFK 319
[Close]
BLAST of mRNA_S-ischiensis_contig8.19746.1 vs. uniprot
Match: A0A3R7XQN2_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3R7XQN2_9STRA)

HSP 1 Score: 209 bits (531), Expect = 4.550e-59
Identity = 128/346 (36.99%), Postives = 194/346 (56.07%), Query Frame = 3 
Query:  159 EQTVSVLHDDSRIKGLVFLQAGEETSVMQFRVEDKDVTRVLSRLQGQGVGVRYGYCDVMQLVGGTAV-----------GPSDFMNLEDDSLTLTP-AEIYKNIATGAAITRDAFILLCISA-----------------TVSGIGLATNSQV------------YVVASMLMSPLMGPLVAASFGLATFSRGLFINGWRNVVIMLAATALIGFVQGVVFCPFAESFLWPTSQMTSRGVNVELLFGMLVAMAGGAAMAVSEINRNVPSIVGIGIAASLLPPAVNCGLCLGAITLGPLVVPNITFSED---VYMEIVWGSCLLVMVNVFLIYATAFSVFKMITPLQQFR 1064
            +  VSVL DD ++  +  ++A   +S++ FRVED+++  +L++LQ  GVGV++G+CDVM L  GT +                +    D  T  P AE+Y +I   + ++RD+ ++L IS+                 +++GIGLA +S V            YVVASML+SP+MGP++  +FG A   + LFING  N +  L  T L+G + G    P+A +  WPT++M  RG  ++LLFG +VA   G   A++E N N+ S+VG+ IAA+LLPP VN G+C+  I  G   V +    E+   ++ EI  GS +L+ +NV LIY TA  VFK I  + QF+
Sbjct:   16 DTVVSVLQDDLKLDNVTSVEA-RTSSIVTFRVEDEEMQAILNKLQLMGVGVQFGFCDVMSLTPGTTMLKRNRNKKKKRSVGRILERNTDVGTAVPVAEMYAHIEANSTLSRDSMVMLLISSYVESVTCLDIVIGDASSSIAGIGLAGDSSVRLAGLLFCILLTYVVASMLLSPMMGPILGCAFGFALRDKNLFINGMLNELFALTITFLLGIMIGAFLSPYAVALNWPTAEMRQRGQAIQLLFGAIVAALSGTGAALAESNANISSVVGVAIAAALLPPTVNFGICVSYIMFGQYFVTDDVIGEEQTIIFYEIAMGSLMLLWINVILIYVTAVLVFK-IKKVDQFQ 359
[Close]
BLAST of mRNA_S-ischiensis_contig8.19746.1 vs. uniprot
Match: A0A7S1U9S5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U9S5_9STRA)

HSP 1 Score: 200 bits (508), Expect = 2.570e-56
Identity = 106/209 (50.72%), Postives = 139/209 (66.51%), Query Frame = 3 
Query:  414 EIYKNIATGAAITRDAFILLCISATVSGIGLATNSQVYVVASMLMSPLMGPLVAASFGLATFSRGLFINGWRNVVIMLAATALIGFVQGVVFCPFAESFLWPTSQMTSRGVNVELLFGMLVAMAGGAAMAVSEINRNVPSIVGIGIAASLLPPAVNCGLCLGAITLGPLVVPNITFSEDVYMEIVWGSCLLVMVNVFLIYATAFSVFKM 1040
            ++  N+     ++ D  +LLCIS+ V+G+GLAT+++  VVASMLMSPL      ASFGLA     LF+ G RN  I L AT  IGFV G++F PFAE   WPT +M  RGV  ELLFG +VA+ GG A+A++E N +V SIVGI IAA+LLPPAVN G+CL    +GP V P++   + ++ +I  GS  LV+VNVF IY  A  VFK+
Sbjct:  110 QVITNVGRQTVLSFDMIVLLCISSIVAGLGLATSNRTLVVASMLMSPLXXXXXXASFGLAVHDHTLFMVGVRNESIALFATVAIGFVMGIIFIPFAEDLFWPTQEMALRGVFAELLFGAIVAVCGGIAVAIAETNSHVSSIVGIAIAAALLPPAVNTGICLAYANVGPSVTPDVDIDQVLFNDIAMGSFTLVLVNVFFIYTAAALVFKL 318
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19746.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6V1TVA9_HETAK7.430e-7545.19Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6G0WXB1_9STRA4.040e-6841.42Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
H3HAV0_PHYRM4.660e-6740.25Uncharacterized protein n=20 Tax=Phytophthora TaxI... [more]
A0A485K6I1_9STRA1.570e-6641.56Aste57867_1945 protein n=1 Tax=Aphanomyces stellat... [more]
A0A225WWU1_9STRA3.570e-6641.01Uncharacterized protein n=1 Tax=Phytophthora megak... [more]
A0A8K1CGX4_PYTOL1.810e-6441.39Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A024U3R8_9STRA4.020e-6140.13Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
K3WKC6_GLOUD3.060e-5938.96Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A3R7XQN2_9STRA4.550e-5936.99Uncharacterized protein n=2 Tax=Peronospora effusa... [more]
A0A7S1U9S5_9STRA2.570e-5650.72Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:3619178..3631197 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score222.6
Seed ortholog evalue2.8e-55
Seed eggNOG ortholog115417.EPrPW00000019511
GOsGO:0007275,GO:0007399,GO:0008150,GO:0009987,GO:0022008,GO:0030154,GO:0032501,GO:0032502,GO:0048731,GO:0048856,GO:0048869
EggNOG free text desc.Domain of unknown function (DUF389)
EggNOG OGs1MJBT@121069,28URR@1,2R1GQ@2759
COG Functional cat.S
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons9
Model size1492
Cds size1026
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817300.924951-UTR-S-ischiensis_contig8:3619177..36194041622817300.924951-UTR-S-ischiensis_contig8:3619177..3619404Schizocladia ischiensis KU_0333UTRS-ischiensis_contig8 3619178..3619404 -
1695741008.5496542-UTR-S-ischiensis_contig8:3619177..36194041695741008.5496542-UTR-S-ischiensis_contig8:3619177..3619404Schizocladia ischiensis KU_0333UTRS-ischiensis_contig8 3619178..3619404 -
1622817301.06382-UTR-S-ischiensis_contig8:3630958..36311971622817301.06382-UTR-S-ischiensis_contig8:3630958..3631197Schizocladia ischiensis KU_0333UTRS-ischiensis_contig8 3630959..3631197 -
1695741008.6564581-UTR-S-ischiensis_contig8:3630958..36311971695741008.6564581-UTR-S-ischiensis_contig8:3630958..3631197Schizocladia ischiensis KU_0333UTRS-ischiensis_contig8 3630959..3631197 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817300.9386103-CDS-S-ischiensis_contig8:3619404..36195241622817300.9386103-CDS-S-ischiensis_contig8:3619404..3619524Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 3619405..3619524 -
1695741008.5638382-CDS-S-ischiensis_contig8:3619404..36195241695741008.5638382-CDS-S-ischiensis_contig8:3619404..3619524Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 3619405..3619524 -
1622817300.9498208-CDS-S-ischiensis_contig8:3620791..36209501622817300.9498208-CDS-S-ischiensis_contig8:3620791..3620950Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 3620792..3620950 -
1695741008.5761921-CDS-S-ischiensis_contig8:3620791..36209501695741008.5761921-CDS-S-ischiensis_contig8:3620791..3620950Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 3620792..3620950 -
1622817300.9661465-CDS-S-ischiensis_contig8:3621730..36217901622817300.9661465-CDS-S-ischiensis_contig8:3621730..3621790Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 3621731..3621790 -
1695741008.5851483-CDS-S-ischiensis_contig8:3621730..36217901695741008.5851483-CDS-S-ischiensis_contig8:3621730..3621790Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 3621731..3621790 -
1622817300.9798203-CDS-S-ischiensis_contig8:3622998..36231401622817300.9798203-CDS-S-ischiensis_contig8:3622998..3623140Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 3622999..3623140 -
1695741008.5959172-CDS-S-ischiensis_contig8:3622998..36231401695741008.5959172-CDS-S-ischiensis_contig8:3622998..3623140Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 3622999..3623140 -
1622817300.9931414-CDS-S-ischiensis_contig8:3624142..36242791622817300.9931414-CDS-S-ischiensis_contig8:3624142..3624279Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 3624143..3624279 -
1695741008.6072915-CDS-S-ischiensis_contig8:3624142..36242791695741008.6072915-CDS-S-ischiensis_contig8:3624142..3624279Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 3624143..3624279 -
1622817301.00769-CDS-S-ischiensis_contig8:3624892..36250191622817301.00769-CDS-S-ischiensis_contig8:3624892..3625019Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 3624893..3625019 -
1695741008.616068-CDS-S-ischiensis_contig8:3624892..36250191695741008.616068-CDS-S-ischiensis_contig8:3624892..3625019Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 3624893..3625019 -
1622817301.0227373-CDS-S-ischiensis_contig8:3627596..36277161622817301.0227373-CDS-S-ischiensis_contig8:3627596..3627716Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 3627597..3627716 -
1695741008.624971-CDS-S-ischiensis_contig8:3627596..36277161695741008.624971-CDS-S-ischiensis_contig8:3627596..3627716Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 3627597..3627716 -
1622817301.036521-CDS-S-ischiensis_contig8:3630178..36302651622817301.036521-CDS-S-ischiensis_contig8:3630178..3630265Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 3630179..3630265 -
1695741008.634728-CDS-S-ischiensis_contig8:3630178..36302651695741008.634728-CDS-S-ischiensis_contig8:3630178..3630265Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 3630179..3630265 -
1622817301.0485709-CDS-S-ischiensis_contig8:3630884..36309581622817301.0485709-CDS-S-ischiensis_contig8:3630884..3630958Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 3630885..3630958 -
1695741008.6453676-CDS-S-ischiensis_contig8:3630884..36309581695741008.6453676-CDS-S-ischiensis_contig8:3630884..3630958Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 3630885..3630958 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19746.1prot_S-ischiensis_contig8.19746.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig8 3619405..3630958 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig8.19746.1

>prot_S-ischiensis_contig8.19746.1 ID=prot_S-ischiensis_contig8.19746.1|Name=mRNA_S-ischiensis_contig8.19746.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=342bp
MQFRVEDKDVTRVLSRLQGQGVGVRYGYCDVMQLVGGTAVGPSDFMNLED
DSLTLTPAEIYKNIATGAAITRDAFILLCISATVSGIGLATNSQVYVVAS
MLMSPLMGPLVAASFGLATFSRGLFINGWRNVVIMLAATALIGFVQGVVF
CPFAESFLWPTSQMTSRGVNVELLFGMLVAMAGGAAMAVSEINRNVPSIV
GIGIAASLLPPAVNCGLCLGAITLGPLVVPNITFSEDVYMEIVWGSCLLV
MVNVFLIYATAFSVFKMITPLQQFRFQQQESDDLGLALGASLFERTMWRA
KNAGSSRADAPHQGRTDATGQSREPSPAGRKGGHTRFQSFG*
back to top

mRNA from alignment at S-ischiensis_contig8:3619178..3631197-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig8.19746.1 ID=mRNA_S-ischiensis_contig8.19746.1|Name=mRNA_S-ischiensis_contig8.19746.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=12020bp|location=Sequence derived from alignment at S-ischiensis_contig8:3619178..3631197- (Schizocladia ischiensis KU_0333)
CCCGGTGCCATGCCGGCCAAGCTGGTGCAGGTCACGATCCCAGCGCATCA
CGAGGAGCAAGCAAGTACCCTTCCGGTCGCTCGATTCATGTCCCCCGCCT
TGTTTCCCCCTGAAATTGCCCTCACACAACCGGCCCTTGTCATCACCCCG
GGTGTCACGAGCAGACAGTCAGCGTGCTGCACGATGACTCGCGCATCAAA
GGCCTGGTGTTCTTGCAAGCCGGGGAGGAGACCTCCGTCATGCAATTCCG
CGTGGAGGACAAGGACGTCACGCGCGTCCTCAGCCGCCTGCAGGGCCAGG
GTGTCGGCGTGAGGTGACATCCCTGGCACAGCTGCCGCCCTTTGCGACTG
GGAATGCTCATGACTGGGAGTACTGTAGACAGACATGCAGCTGAGGCTCC
GACTCCCTCCGCCACATCAACAGACGGGGGTCTTCCACCCCCAATGAGGC
GTGTCTCCCTCTCTGCGTGGGGTCGGGCTTGTGGGGGCGGGCCTGTCCTA
CAGCGGCTGCTTTGCCTGCCTTGTGTACTTGCTTAGTACTGCTGCAGTAC
TTCGAAGTATTGCATGCGCTATCTTGCAGGCGGCCTTGGCCCCGACGTGT
GTAGTTTTGTGGGGGGAGAGGGCACCAAAAGCTTCCCTTGTCGTGAGACG
GTGTGGCGTGATTCGATGGCCATGACAAGGCGGTGCAAACTGGATGCGGT
GTGTGATAATGCGCGCGCAACATGTGATGTGGCATGATGTTGTGAGGTGT
TGGTGTGGCGTCCAGGCAGTGCCCGGCCTACTGCAGCGTGATAATGGCGT
GATGCTGCAGCCGTGCCATGGCCTGCCGTGTCATGGCCAGGGACGGCCTC
GAACCCGGCCCGACTGCCCTGTCATGCCGGCAATATGATGTGAGGTGACG
TGGCGCTGTGTGACATGCGATGCCACGTCCAGGTACGGCTACTGCGACGT
GATGCAGCTGGTGGGGGGGACGGCCGTGGGGCCTTCCGACTTCATGAACC
TGGAGGACGACTCGCTCACGTGAGACGCACAATTACTGTATCACTTGCTT
CGAGGGTAGAGTACGTGGGCGTATGCCTGGGGGGTGGCTCACTGGCGTGC
GATGCCTACATAACGGCTTGCTTTTGAAGCGTTAATTGAGGGGGAAATCG
CTCATGTGATAAGTACGCGTAGCCACTTGCGGGGTACCCTTCAGTGATGT
GGTGCCGTGATGCCACTTGTATGCCATGGTTGCTCTGTGATGCAGCTTTG
TTCGAGAAGACACGTACTTCAAGTGCTAGTATGTAGTAGTACTTCAGTGA
GCGGGAGAGAGAGAGGTGTCCCTTCTTACGCGAGTCCCGGGCCCCAATAA
GGCCGCTGTTTGACATCACATCGCATGGCATCGGGGCATCAGGGCATTGT
CGGGCGACCGAGCAGTCGGGATCAATCGTCCTGATTGTTCCTCCCGCGAC
CGTTAGGGTGCCGGTGCACCCACGAGCAACTCTGCTAAGAGACCCACAAG
TACTCGCAGATGGCTACGCTTTGTCGCAGTGTAGTCTCGCATCCCAACGC
CAATGCATAGTGGCTTCCAGCCTTGGCTAGTGCGCAGCGCACTGACCGGT
GCAATCCCGGGATGCTTTGTCCCGGCCTAGTTGGGATGCCAGAGTCTGTG
GCTCAATCGCTACTCCTGTCGGAGGGCAAGCTCGAAGTTTCGACTTCGGC
TGTCGGCAATGTACGCATGGTTATGTCGCAAGACAAACCAGTGAGTACAG
AGAGATGACATGACGTCACATGCCACAAGCAGTCTGCCAGTGGGCCCCAG
CCTGGGTGTGCCAGTGATGGAATATCTAGGCAACCAAAACTTTTTATCGA
CAGTAGTGGTCTATTTTGAGTGGGTAGTATTGTAAGGAGCAACACGGGGC
GAGGTGCGGGCCACGTCACTGGACCTCAGCCGCGGCCCTTCCTTAGCTTG
CCAGGGGAAATTTGTGCGAGTGGTAGATATCTATCGATAGTCGATATGTG
ATAGTTTGACCCACACTAAATCCAAGTAGTTAGTAGCGCCACCCACAAAA
TCAGTCGAGCCCGATAGCTATCTACTGATCGATATTCCACAACTGGAGTG
TACCAGTAGATTGCTGGCACCGCCTTCCACGGGCTCTGCACATTATTATG
TACTTCGAAGTATACTTAGCTCGGGGGTGGTCCCTCCCTCCCACCCTGGC
TTGCCAGGGCCGGGAGGGAGATAGCTCCGCCCTCGAGGGTGCGGCGCGTA
GGCAATTGTCTCTGGAGCCCCTCCCACACCTAACATGGCTTTGCCACCTG
GGGGAGGGAGCGGGGCTGCTCTGCTCGGTCGAGGCTCGGGGTCAATGGTC
TTGGGACTACCCCAAGCACTGTTGGGGGTGAGCACATACTAGTAGGTACA
TACTTCGAAGCATATATACTACACGTACGGCAAGCACAACGTGAGTACAT
ACATAGGTAGTATATATACTCCGAAGGAGTTTGAAGTACTACCATATACC
TACTACGTAGTATGTACTCTGCGCAGTGAGTGTGTGTCGAAGCAGCCCCC
GGAACTGGTGCCATATACTTAATCCCAAATGTGTGCTTCGAAGCATGAAC
TTTCGGGTGCGGGGGGGTTAACTGCGGTCGCTCCCAACTCGGAAACGGTC
GTGTGGGCACTGCTTTCGGGCGGGCTACGGCAAGCTCTGTTAGATGTGAG
GCACTGATGTGATGTGATGTCGCACTACAGTGCGTTGGAGCACACATCAC
TTGGAGGTATGGTTCATCACGTCGCTTCGAGGTACGGTTCATCACATCAC
ATCGCATCACAGCATGAGTGCCCGTGGCCAATGGTCTCCCGGCTACAGCA
AGCAAATACTGCTGTGCGTGACTAGGTATTCTGCTACAATTGTACAGTGT
GCTGCAAGGTCAACTCCAGTGACAACGTGGCATGTGCTGTAGAGCTCTAC
GGCGAACAACTAATGCCCCCCCCCCCTCTTTGCCTCTACCCCACCGCCCC
GGGCACTGGGACACCCCTTTCCCCCTCTGCTGGCCATGCAACGACCGCAA
CCATCACCACCACCACCACTACCACCACAACCGCCACCACCGCTGCTACC
ACCACCGCCGCCGCCACCACCACTGCCATGGCCACCACCACTGCCACCAC
CACCACCACCGCCGCTGCTACTTACCACCACCACCACTGCCACGGCCACC
GCCCCCCCCCGCACCGCTACCACCGCCACCTCCGCCGCAACCACTGCCAC
CATCGCGACCACGACCTTCGCCGCCGCCACGACCACCAACGACCACCACC
ACTACCGACACCACCACCGCCACCACCACCTCCGCCGCACCACTGCCGCC
ATCGCGACCACCACCACCACCACCACTACCACCACCACCACCTCCGCCTC
AACCGCTGCCACCATCGCGACCACCACCACCACCACCTCCGCCGCAACCA
CTGCCCCCATCGCGGCCACCACCACGGCCAGGCTGACCCCCGCGGAGATC
TACAAGAACATTGCGACCGGCGCAGCCATAACACGGGATGCCTTCATCCT
GCTGTGCATATCTGCCACCGTGTCGGGCATCGGCCTCGCCACCAACAGCC
AGTGAGTGGACAGTACTTATGCAGTACTTTGAAGTCCTCTCTCTGCCATC
ATATCGGGCATCGGTCTCGCCACAGGCAGCCAGTGAGTGTACAGTACTGT
AGCACTTCGAAGTAGGTGCCCTCATCATCCAGTACCTAATTCGTAGAGCC
GTGATGTGCCCGATAGGTCAGTCGAATGGATGTCTTTCGGCCCCAACCTG
GCGACTGATTCACTGTAGTTTGGTTGCTCAGAAATCTTTAAGCTTTCGCC
GAGCTCGGGCGGGGGCGTCCGGCCAAGGTCTCTGCTGCGCCAAAGCTCTG
TTCGATGTGACTACTAGTACATGTCTACCCGCTTGGAGTGCAGCAAGTAT
ACAGGAGCACGTGGTATAGCTCTTGGCGCTCGCCGTGTTCAAAGTATGTG
TGCACTCATACACTTCGTCTTCAAAGTCTGGTGCTCCGTCTCGACCGAGG
TTCTTCGTCAATAGTCTCGGGACTACGGGAAGCACAACGTGAGTATGTAC
TCATTGGTTTGTCTTGCGGCACAACTGTGCGTGCAATGCCGACAGCCCTA
AGTCGAAACTTCGGGTTTGCCCTCCGACAGGAGTAGCTATTAAGCCATGG
ACTCTCGCATCCCAACTAGGCCGGGACGGAGCATGCCGGGTTTGCACCGG
CCAGGCCGTGCACTGGCCAAGCCCGGAATGCCATGATGCCTTGGCATCGG
CAAGCCGTATGAGGGGCCGCTCGCTAGGCTACGACAAAGCGTATCCGTTG
GCGAGTACTCGTGTACGTCTCTCTTCGCAGAGTTGCTCTTGGGCGCACCG
GCACCCTAATGGTCACGGTAGGAACAATCAGGATGATCGATCCCGACCGC
TAGGTCGCCGACAATGCCACCGTGAGTACATGTATATATTGTGCAGTGCT
ACTCGTACAGAATACCGTAATCATCGGAGAGATCTTGCCCCCACGGGACA
ATTTTCGGGGGAATATTTCTCGCCGGGAAGGTGCCGAAATGTCCCGAAAG
CCCCGGACAAATTCCCCCAGGTCCCGGGGGAGATTTTCCGAGTTCTCCCC
GTGCGAATCCGACCAGTATTCGGCGATAACAGTTCTCCCGAAAATTGTCG
GGGGGGCAAGATCTCTCCGACGATTATGGTAGGCACAGGTGAGGTCCGCG
TTGCTACTTAATGACACCGGCAGCGGGCCGCCCTTTCTCACAAAGCAAAC
CAGAGGGGGGGCAAGTGGGTACCGTAAAGGACGGTGTACAACGACCCCCT
TCGGGACAACCGGCGGGCAATTTTTTCTCGCCCAATCGATGTCCGATCGA
ATCGACAACCCTCGGGATATATTGGTCACGACCAAAGGCTCTCATTCCGA
GGGTTTTTGGTTCGATCGAAAACCGATCCGGCGAGAAACGATTGCCCGCC
GGTTGTCCCGAAGGGGGTCGCTATACGCTGTCCTTTGCAGTACGGTACAA
TAGTCAGGGGACCGCTGCATACGGAGTATATGTACGAAGTAGTAGTAATA
CTGGTAGAGTTCTTGTCCCCAACCCGTGCGGTGCCTGGGCATGATGGGGG
CGGGGAGAAGGGGGGGCGGCTGGCTCTGATGAGTGGGGGTGACGATCGGC
AGGGGGGCTGCTGCGTCCCTCGTGGGCGCGCGCTTGGTCAACGGAAGTGC
GGTACTACACTAGTACGTGCGGTACAGCGCAGTAGTCTGCGCAGCAGCCC
CTTGGCACGGAGGCACTTCGAAGTAGTTGGAAGCACGTACTGTACTTTGT
GCGTGAGTATGTATATATATGTACTCATACTTCGAAGTACTCAAGTTGTG
CTTGCCGTAGTCCCGAGACCATTGACCACGCGCCTCGATCGAGACGGAGC
AGTGTGCGTGTTGTACGTAAGACCAGTACCAAGTGCACCTACTATGTCGT
AGTGTACTTTGCTTTGCGCACGTGCTGTAGCCCAGAGACCTATTGGCAGC
GCCCCGTCTCCCAAGTTGGGAGGCCAGGAGAACAGCGTCAGTTAACCCTT
TTCACCCCTGCTAAATTGGACGTACACACTAAAGCCCTATGATTATACGG
ACCCAGGGGTGAAAGGGTTAACGTTCCAGAAGCGTGTTTTGTGTTCCCTG
GCGAGCCCCGACACTAGCCCACTACCCGCCTGCTGCTGCTGCCGCCACCG
CCGCTCCTTGCCTCCACCTCCACCCACCACCACATGTGTGAATTGCCGTG
TGTCTGGCTCATGGCTTATGCCATCGCCTCAACGCCAATAGCCATATTGT
TAGTAAGTGTTAATAGTGTTAAAACTCCTGACACCGCCACCACTGCCGCC
ACTACCACCACCACAACCACCACCTTCGCGCCACCACCGCCGCCGCCGCG
CCCTCTGCCACCTCCACTAACACCACCACCCTGCCACCGCCCCCGCCACC
AATATATATACAGATACTCGAGTATATATTTCCTCAAGTTGTGATTGCCG
TAGTCCCGAGACCATTGATCACGCGCCTCGGTCGAGACCAATGCCACCAC
AACCCACCGCCGCCGCTGCTGCTGCCGCCGTCACCACCACCACCTCCCGC
CGCCTCCGTGATTGTGCCCCACCTGTAGGGTATACGTGGTGGCCTCAATG
CTGATGAGCCCGCTCATGGGGCCCCTGGTGGCGGCGTCCTTTGGGCTGGC
CACCTTCAGCCGGGGACTCTTCATTAACGGCTGGCGAAACGTCGTTATCA
TGCTCGTGAGTGACCTCGTCACCCAGTCCTGAGCCTTGTTTTACACGTGG
TCTCTCTCTCTCCCTGTCTCCCTCCCTCTCTCTCTCTCTCTCTCTCTCTC
TCCCCCTCTCCCTCCCTCTCTCTCTCTCTCCCTCTCTCCCTCTCTCTCTC
CCTCTCTCTCTCTCTGTCTCTCTGCATGTGCACGCGCACAGTTGCGCGCA
AGTGCAGCGTGTCGCTATGGCCCCCGTCATGTGTACTGCCCGCTTGCACA
CGTGTGCGCGCCGTGTGTGTGCGCGTGCGTGCGTGCCTGCGTGCGGTGAG
TGAGGCACACACAAGGGCGCGCAGTGCTCAGGTGCCACGCCACGCCTACG
TACTGTACTGTACTGTACTGTATACAGTTACCCTTTTGTGTTGCTTCGGA
GTACTTCCCAAGCACGAAACCAAACTCACCTCCATGCAAGTACCTCGGTA
CCGTAGCCGATCGTAGCAGCACTGTAGTGCCCGTACCTCAGTACCGTAGC
CCTCCCCCCCTGGCCGCGGCCGCCTGGCCCAACTCCTCTGCCCCTGCAAT
GATGCTCGCCCCGTCCAGCCCAACCCCCCCCCCCCTGTGTGTCATTGCTT
TGCGCCCTTTGCCCCCAGGCCGCCACGGCCCTGATTGGGTTTGTGCAGGG
GGTGGTCTTCTGCCCGTTTGCGGAGAGTTTCCTGTGGCCCACCAGCCAGA
TGACCTCCCGGGGGGTGAATGTGGAGCTCCTCTTCGGCATGCTCGTGGCC
ATGGCGTGAGTTAGTTGCACGTGTGTGCGTGTGCGTGTACTTGTGTGCGT
GTGTGTGTGTGTGTGCACGTGAGTGAGTGTGTGTGTATATGTGTGTGTGC
TTGTGTGTAGTCGAGTGTGTGTATGTGTGTGTGCACGTATGTGGGCGGGT
GTACACGCGCGCGTCTGTGTGTGTGTGCGCGCGCGTGCGCGCGCACGCGC
GTGTGCGTCTGTGTGCGTGTGCGTGACGGGAGCAGCCATCCAGATGGATG
GCTGGGCGGACCAGCCACCAGACAGGCATATTGACCGACTGACCGACAGA
CCGGCTGACCCAAGGGCAGGCAGACAGAAAAATGACATACTTCGACGTAC
AGCTGTACAGTAAGGGATAGATGAGCCTGCCTTACCAATCTGTTTGCCCA
CCTGGCCTCCTGCCTGCGTTCATGCCTGCCCACCCGCCCGCCTGCCTGCG
TACCTGCCTGCCTGCCCGCCTGCCTGCCTGCTTGCCTGCCTCTTACGGAA
TATCTAAGCAAATCAACCCATTTATCGACAGTGCCGATCCATATATCTAT
CGAAAGTCAATGTTCGATAGTTTGACCCACACTAAATCCAAGCAGTTCGT
AACGCCACCCACAAATTCAGTCGAGCCCGATAACTATCGACTGATCCATG
TTCTGTAACTGGCCTGCCTGTGTCTCCCACCTGGCCCGGCTGTGAGCCCT
TTCCCTGCCCATGCCCCCCCTGGCCAGCCCCCGGCCCCGCCCCACCCCCC
CCTGGCGCGTGAGCCCCCCAACTGCGGCTGACGTCCCTCTGCGCGTGCCC
CAAGGCTTGGCACTTGGAGGTTCATTAGGGCCCTAGTTAGCAAATTACCT
CTAGCTAAGGGCCTAAAGGGGCAGCTCCTACTACAGTAGTAGGGGTTAAG
TGCCAACCCTGCGCCCCCTGCCTGCCCCCCCCCCCCCCCCCCCGAGCGCT
CTCTCGCGCCCCAACTTCTACTGCCGGCTGGCTCTGCCCTTGGCTTGTCC
CTGGCAGGGGTGGCGCGGCCATGGCGGTATCGGAAATCAACCGCAACGTG
CCCTCGATCGTGGGGATTGGCATCGCCGCCTCGCTGCTGCCCCCCGCGGT
CAACTGCGGGCTCTGCCTGGGGGCCATAACCCTGGGCCCGCTGGTGGTGG
TGAGCAGTTGTGGAATATCGATCAGTAGATAGCTATCGGGCTCGACTGAC
AGTAGATAGTTATCGGGCTCGACTGATTTTGTGGGTGGCGCTACCAGCTA
CTTGGATTTAGTGTGTGTCAAACTATCGAATATCGAATATCGATAGATGT
ATATACATATTAGAGGTACAAGTAGATCAGTACTGTCGATAAATTGGTTG
ATTTGCTTAGATGTTCCATCACAGGTGGCGAGGGGAAGGGAGGGAGGGAG
AAAAGTGGTCCGCTCGCGAGCGGCGCGTGTACTGTAGCAGCCGTGATTTC
CGTTTACCCTTTTGCCCCTGGGGTCCGTATAATTGTACTTCGAAGTAGGA
TTGTAGTGTGTCGGTCCAATTTAGCAGCGGTAAAAGGGTTACTTAGTACT
ACTGTAGTTGCACCAAATAAGAGGGTTGTTGTCCACGTCTTTCAGTACCT
AGTGGCCTGGGCGGTGGGGCTCCCTCTCTAGCTCGCAGAGCCAGAGCAAG
GCAAAGCAGAAGGGGGGGGCTGGGATGGGGGAGGGGAGGGGGAGGGCAGG
ATGCGGGGGAGGAGGAGAGGAGGCCGAGGGGGAGGAAGGGCTGGGGCGGC
GGGCAGCAACACGGTGCAGGCGGAGGCTGTGATTCATATATAAATTGTAG
CGAGGTACAATCGCACGTGTGTGAGATTGAGTGTTCTCGTATTAGTGGTT
GTCACAGGCGGAGGCTATTTTACGTTGAACCTCCAGGGGGGACAGAACGT
TTCTCACCTTGAGACGCGTATGTACAGTATTGGTTAAAGTGGGCAGGATA
CCAGCTTGAACCTGGCCGGAAACCCGTCCCTGTCGGCCCAGTCCCATCGC
CTCACCTTGAGAGGCATAGTATTTGTTGAGTTGGGCAGGATACCAGCTTG
AACGTGGCAGGAGACCCCTCCCTGTCGGCCCAGTCCCATCGACTCTACAG
TACTAGTAGTAGTCCACGCACCGCCGCCAACAATGCCGCTGTCCACTAGT
ACGAGGACACTCAGCCTCACACACTTGCGATTGTACCTCGTTACAATTTA
TATATGAACCGTCTCGAACGAGGCGCGGGGTCAATGGTCTCGGGACTACG
GCAAGCACCACGTGAGTACATATATGTATATATATATATGTGTGAATCGC
CGCCAACGCCTTCGCTGTCCACGGCTGCCCGTCCATCATCCCTCCACCTG
CCTGCAGCCCAACATCACCTTCAGCGAGGACGTGTACATGGAAATTGTCT
GGGGCAGCTGCCTGCTGGTGAGCGACGACGACCCGGTACTTGGCGGTTTT
GATTCGACTCTTGTCCCTAGGCGGTGGCGGGTAGTGGTTCACTCGTGTGA
TGTGACGTATAATGTGATGTGGTGTGATGCCAACTATGTACTCATATGTA
GGTGGAGTACGGCACATTAGAGTACCCATCCCATCCCATCCCATCACGTC
ACGTCACGTCACGTCTGATTCAGTGTCCCTGCCGCCCTCTACGGGCTACT
TGGAGTATAATGTATGTGTGTGCTTTGAAAAACTCCTGGGCTTGTATTAC
GACATAGCCTTGAGGGCATTGCTGAGTATATACACGAGTATACCCCCCAG
AGGAGGAGGAGGAGGAGGAGGATGGGGAAGAGGAGGTGGAGGAGGAAGGG
GAGGAGTGTGGGGAAGAGGAGGGAGGAAGAGGAGGAGAAGGAGGAGGGGG
TAGTGTACTGCACTCTATTGGCACCTCCCCCAGACTGTTGTACGTGCCTT
CCGTGTCTAGAGTGAATAGAGCACGGCATCGACAGCAAGCACCTTGAACC
TCGAGCCCCGCCCCCGATGCCGAACTCTGGTCTGCATGTCTCAGGGTTGG
CACTTACCCCCTACGCAAGTGGTGCTCTTTTAGGCCCTTAAGTACTGTAC
ACAGAGGTATTTAGGGGTAATTAGACCTGCAATGCACGCAAGGTTGTGTC
GCAAGACAAACCAATGAGTACATATATACAATGAAGGCCAACTAGGCCCT
AATTATCCTTTAAGTGCCGACCCTGGCATGGCTCGCCTCCCGCGCAGGTA
ATGGTGAACGTCTTCCTCATCTACGCCACGGCCTTCTCTGTGTTCAAGAT
GATAACTCCCCTGCAGCAGTTCCGCTTCCAGCAGCAGGAGAGCGACGACC
TGGGGCTGGCGCTGGGGGCCTCCCTCTTCGAGCGGACCATGTGGCGGGCA
AAGAATGTGCGAACTCTTTGCGGGGTTGTCGATGAGAAGTTCGTTCGCGT
ACACTTTCTCTTTTGTTTTGGCAAGAAGACAAACAAGCGAGTGGGGGAGA
AGAGGTGTTCCTAGGTGTTCCTTCTCTTTCTGTCTAAGAAAGCATGTGCT
TCCGTAATTTCCTCCCTCCGTGCGTCACCCCCCCCCTCCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGCGCGCGCACGCTCTCC
CTCTCAGCCTGCGTCCCCTTCATCCCCTCTCAGGAGATTGTACTGCAAAG
CACGTCGTACACCATACGTACGGTTTTCTGCTGCACACAGCTACAGCACA
AACCATGCTTGGCCCAGAGAGAGCCTCTATTAAGTGTTACAGTAGGAGCC
GTGAAGTGCAGTTGTACATTGCGGCAGTTCTTCGCTGAGAAGGGACCTCT
GTTAGCTGCGGTGAAGTACAGTCGTAAGCACACAGCACAGCAAGTAGTAC
GCGAAGGTCGAAGGCCCAAGTGCCACGACTGTGCACACACGTGCGGAGGA
GTTTCGACGATGTACGGTACGTGAATCATTGGTGCATTCTTCGAAGCGTT
CAAGGAGATTGGTGCTCCATTGCCCAAGTACTTCGTAGCTAAGGTGATTG
GTTTTCAATCACCAAGTAGTTAAGGAGATTGGCTATGCACAGCGTGCGGA
GGAGTTAAGACGATGTACAGTACGTGAATCATTGGTACATTCTTCGAAGC
GGTCAAGGAGATTGGTGTTCCAATGCCCAAGTAGTTAAGGAGATTGGCTT
TCAATCACCAAGTAGTTAAGGAGATTGAGTGTGCGCAGCGTGCGGAGGAG
TTAAGATGATGTACAGTGTTGGTGGTGGTTGTTTATGGGCGAATCCAGTC
GGCAAAGCTCGAACCAACACGCGCTGGAAGCCCAGTCGCGTCGCACCGTC
ACCCCACCCACCCACCTGCACATTGCTTTCTTGTGAGTTTTTTTTTGTTT
TTTTGCCCGTTTGATGTTGATTTATGCCCACGGGTGTTCTTTCTGCGCAC
ATCATTTGTTGTTGGTGGTGTTGTTGTAGTTGTTTTTGGCCTGCTCCGTC
TCGATCGAAGCGCGTGGTCAATGGGCCCGGGACTACGGCAAGCTCTGTTC
GATGTGAGTAGAGTACGTATATATTGTTGTTGTCGTTGTCGTCGTGGTCA
TTTCACTTGCTTTCTTTCCTCCATCAAAACACCGCCGCCCCACCCCACCC
CACCGCGCGCCGACGGGAGGCAGGCCGGTTCCAGCCGCGCCGACGCACCC
CACCAAGGGAGGACTGATGCCACTGGCCAGAGCCGAGAGCCCTCCCCCGC
AGGCAGGAAGGGCGGGCACACACGCTTCCAATCCTTTGGATGACGTCAAG
CCCTGGGCCGGACCGCAGCACCCCACAGCCGGTTGGAGTGTGTGTTCGGA
CGAGGTTCCTCGTCTCTGTGCGTGCCCCGGACCCGAACGATCCTCGTCTT
TGCTCCTTCGCGTGGATCGCTGGCCAGCTGTAGCTTTCGCCATTGGCCAC
GCGTCCTATTCGACGGAGCACGGCGGGTATTTCACCGGAGTGGGATAGAG
AATCCGGGGCGGTGGCGGCC
back to top

Coding sequence (CDS) from alignment at S-ischiensis_contig8:3619178..3631197-

>mRNA_S-ischiensis_contig8.19746.1 ID=mRNA_S-ischiensis_contig8.19746.1|Name=mRNA_S-ischiensis_contig8.19746.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2052bp|location=Sequence derived from alignment at S-ischiensis_contig8:3619178..3631197- (Schizocladia ischiensis KU_0333)
ATGCAATTCCGCGTGGAGGACAAGGACGTCACGCGCGTCCTCAGCCGCCT
GCAGGGCCAGGGTGTCGGCGTGAGATGCAATTCCGCGTGGAGGACAAGGA
CGTCACGCGCGTCCTCAGCCGCCTGCAGGGCCAGGGTGTCGGCGTGAGGT
ACGGCTACTGCGACGTGATGCAGCTGGTGGGGGGGACGGCCGTGGGGCCT
TCCGACTTCATGAACCTGGAGGACGACTCGCTCACGTACGGCTACTGCGA
CGTGATGCAGCTGGTGGGGGGGACGGCCGTGGGGCCTTCCGACTTCATGA
ACCTGGAGGACGACTCGCTCACGCTGACCCCCGCGGAGATCTACAAGAAC
ATTGCGACCGGCGCAGCCATAACACGGGATGCCTTCATCCTGCTGTGCAT
ATCTGCCACCGTGTCGGGCATCGGCCTCGCCACCAACAGCCAGCTGACCC
CCGCGGAGATCTACAAGAACATTGCGACCGGCGCAGCCATAACACGGGAT
GCCTTCATCCTGCTGTGCATATCTGCCACCGTGTCGGGCATCGGCCTCGC
CACCAACAGCCAGGTATACGTGGTGGCCTCAATGCTGATGAGCCCGCTCA
TGGGGCCCCTGGTGGCGGCGTCCTTTGGGCTGGCCACCTTCAGCCGGGGA
CTCTTCATTAACGGCTGGCGAAACGTCGTTATCATGCTCGGTATACGTGG
TGGCCTCAATGCTGATGAGCCCGCTCATGGGGCCCCTGGTGGCGGCGTCC
TTTGGGCTGGCCACCTTCAGCCGGGGACTCTTCATTAACGGCTGGCGAAA
CGTCGTTATCATGCTCGCCGCCACGGCCCTGATTGGGTTTGTGCAGGGGG
TGGTCTTCTGCCCGTTTGCGGAGAGTTTCCTGTGGCCCACCAGCCAGATG
ACCTCCCGGGGGGTGAATGTGGAGCTCCTCTTCGGCATGCTCGTGGCCAT
GGCGCCGCCACGGCCCTGATTGGGTTTGTGCAGGGGGTGGTCTTCTGCCC
GTTTGCGGAGAGTTTCCTGTGGCCCACCAGCCAGATGACCTCCCGGGGGG
TGAATGTGGAGCTCCTCTTCGGCATGCTCGTGGCCATGGCGGGTGGCGCG
GCCATGGCGGTATCGGAAATCAACCGCAACGTGCCCTCGATCGTGGGGAT
TGGCATCGCCGCCTCGCTGCTGCCCCCCGCGGTCAACTGCGGGCTCTGCC
TGGGGGCCATAACCCTGGGCCCGCTGGTGGTGGGGTGGCGCGGCCATGGC
GGTATCGGAAATCAACCGCAACGTGCCCTCGATCGTGGGGATTGGCATCG
CCGCCTCGCTGCTGCCCCCCGCGGTCAACTGCGGGCTCTGCCTGGGGGCC
ATAACCCTGGGCCCGCTGGTGGTGCCCAACATCACCTTCAGCGAGGACGT
GTACATGGAAATTGTCTGGGGCAGCTGCCTGCTGCCCAACATCACCTTCA
GCGAGGACGTGTACATGGAAATTGTCTGGGGCAGCTGCCTGCTGGTAATG
GTGAACGTCTTCCTCATCTACGCCACGGCCTTCTCTGTGTTCAAGATGAT
AACTCCCCTGCAGCAGTTCCGCTTCCAGCAGCAGGAGAGCGACGACCTGG
GGCTGGCGCTGGGGGCCTCCCTCTTCGAGCGGACCATGTGGCGGGCAAAG
AATGTAATGGTGAACGTCTTCCTCATCTACGCCACGGCCTTCTCTGTGTT
CAAGATGATAACTCCCCTGCAGCAGTTCCGCTTCCAGCAGCAGGAGAGCG
ACGACCTGGGGCTGGCGCTGGGGGCCTCCCTCTTCGAGCGGACCATGTGG
CGGGCAAAGAATGCCGGTTCCAGCCGCGCCGACGCACCCCACCAAGGGAG
GACTGATGCCACTGGCCAGAGCCGAGAGCCCTCCCCCGCAGGCAGGAAGG
GCGGGCACACACGCTTCCAATCCTTTGGATGAGCCGGTTCCAGCCGCGCC
GACGCACCCCACCAAGGGAGGACTGATGCCACTGGCCAGAGCCGAGAGCC
CTCCCCCGCAGGCAGGAAGGGCGGGCACACACGCTTCCAATCCTTTGGAT
GA
back to top