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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 72.4 |
| Seed ortholog evalue | 5.2e-10 |
| Seed eggNOG ortholog | 2880.D7FMP0 |
| EggNOG OGs | 2AMK4@1,2RZCC@2759 |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 1155 |
| Cds size | 1152 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817263.7694798-CDS-S-ischiensis_contig8:3479840..3480830 | 1622817263.7694798-CDS-S-ischiensis_contig8:3479840..3480830 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 3479841..3480830 - |
| 1695740979.388433-CDS-S-ischiensis_contig8:3479840..3480830 | 1695740979.388433-CDS-S-ischiensis_contig8:3479840..3480830 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 3479841..3480830 - |
| 1622817263.785148-CDS-S-ischiensis_contig8:3481932..3482094 | 1622817263.785148-CDS-S-ischiensis_contig8:3481932..3482094 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 3481933..3482094 - |
| 1695740979.4001079-CDS-S-ischiensis_contig8:3481932..3482094 | 1695740979.4001079-CDS-S-ischiensis_contig8:3481932..3482094 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 3481933..3482094 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig8.19735.1 >prot_S-ischiensis_contig8.19735.1 ID=prot_S-ischiensis_contig8.19735.1|Name=mRNA_S-ischiensis_contig8.19735.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=384bp
AGAPPVRVTCVRGTCRWKTSGRRPRAQERPLMDFHQHSRQGTQGCGPGVV
WSEQHTEIMDSLIGLNGQVHSSNPLLDSGAVLSHLIQFTSAKEYLFVAGV
SRAWRASWLFEGRRCETSLSRASEAVSRLSWARDSGCPWNELTCAAIAEE
SHLDVLKWARQNGCPWDRRVFANAAWGGHLEVLKWARETGCPWDEPVCAS
AAWRGHLDVVKWAREDGCPWNVETCIRAIMGGHLEVLKWARKNRCPWGEY
ICPRTASFGHLEVLKWARENGRPWDAYTCSRAAEGGHLDILKWARENGYP
WDVLTCSSAAKGGHLEVLTWARENGCPWNEKTCSGAAVGGHLEILRWARE
NGCSWNEETCSGAAVWGHLEVRRWAGETGAPWDE back to topmRNA from alignment at S-ischiensis_contig8:3479839..3482094- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig8.19735.1 ID=mRNA_S-ischiensis_contig8.19735.1|Name=mRNA_S-ischiensis_contig8.19735.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=2256bp|location=Sequence derived from alignment at S-ischiensis_contig8:3479839..3482094- (Schizocladia ischiensis KU_0333)
GCGGGCGCCCCACCGGTACGGGTGACTTGCGTGCGTGGCACTTGTAGGTG
GAAAACTTCCGGGAGACGGCCAAGGGCACAAGAACGGCCACTCATGGACT
TCCACCAACATTCCCGGCAGGGAACACAGGGCTGCGGGCCTGGAGTCGTG
TGGTCTGAACAGGTCAGATATATCCGACACATAATTTCTTTACGATTGCG
TACATAAGCATGGGACTTTCAATCCTATAGGAAAACCAATGTCAGTTGCG
ATAACCTCTGTGGGGCTCGCCTACTGGAATACTCCCACATACCCTTGCTT
TTAGGTGGGGAATGCTCCACCAGGTCACTTTTGTGTCTCTGAGGGGGGAG
GTACCATGGAAACCCCGCCTTTCGTCATCTCCTGAGCGCTGAACGCCGCG
GTACTTTAAGCCGGGTGATGTTTATGTGTGTTTGTTCCGGTCCTGTAGTT
TGTTTACGACGGAATGCCTGGGCTCTTGTAGAGATGGACACGGAGCCAAT
TGAAACCCTCCTTGGTTATTCAACCAAACGAAAACCGTGTATGTGCACAC
ATAACCCCCGCGCAAGAGCAGTAAACATGCAGCTATGTAGCGGCCCGGGT
TTAACCGGTAAGTGCTGGTTAACCAGCTGTAATTCGACAACTACCGGCAG
GCTGTGACCGGTGTTCCGTAATCCTCGATTTTATCAATGCACATTTTGAC
CTCTAGGTCGTCGCCCTCCTCGATCTCAATCGTGGCTTGCAAAAACGGTG
CCAAAAACGCGCAAAAACACGGAGAAATGGAACCGCCCGACAAAAAACAT
GCTAGAAGCATTGAGTAAGTACCTCGTACGAGTAGCACACATGAAGCAGA
AAGAAAACAGTCCCGCGAGCCCAATTGGATTGCCCACAACGATTGATCGC
CATGTCGTGGGCTTCTAGTCGGGTTATAGCACTGGTCGTTGGCACGAACC
ACAGTGGTGACGAAACGGGCAGACACGGAACAGGCAGCTTCTTGGCCGAC
CCAACTTGTAGTTTTGTTTCACGACGATCGCACGAGCAGCTGACCGTGAC
GATACCGTCTCTGCCACTGTGACTGTGCTGCCCCAACCCGCACGGCCTGG
CATGAGCTGTGCTTGACCCCCTACAGCAAATGGAGTGTGTGGTGAAGGCA
GTAGTTTCGACTTGTTTGCTTGCATGTGCGCAACTATCTGCACTATCAAA
GACCTTCAAGGCTTACAATTTACCCTTGACACCCTGCGCCATCTGCTGCA
TTCGCCTGTCACAGCACACAGAAATCATGGACAGCTTGATTGGACTGAAT
GGTCAAGTGCACTCCAGCAACCCTCTGCTGGACTCTGGCGCTGTGCTGTC
TCATTTGATCCAGTTCACATCGGCCAAGGAGTACTTGTTTGTGGCTGGTG
TGTCCCGGGCTTGGCGGGCCTCGTGGCTTTTTGAAGGGCGCCGTTGTGAA
ACCAGCCTTTCGCGGGCCAGTGAAGCCGTGTCCCGTCTGTCATGGGCACG
GGACAGTGGTTGCCCGTGGAACGAGCTGACGTGTGCTGCAATTGCCGAGG
AATCTCACCTGGATGTCCTCAAGTGGGCCAGGCAGAACGGGTGCCCCTGG
GACAGACGGGTCTTTGCAAATGCCGCATGGGGGGGGCATCTGGAAGTTCT
TAAGTGGGCCAGGGAGACTGGGTGCCCCTGGGACGAGCCAGTCTGTGCAA
GTGCCGCATGGAGGGGGCATCTGGATGTTGTTAAGTGGGCCAGGGAGGAT
GGGTGCCCCTGGAACGTGGAGACCTGCATAAGGGCCATCATGGGAGGGCA
TTTGGAGGTCCTGAAGTGGGCCAGGAAGAACAGGTGCCCCTGGGGCGAGT
ACATCTGTCCACGCACCGCGAGTTTTGGGCATCTGGAGGTTCTTAAGTGG
GCCAGGGAGAATGGGCGCCCCTGGGATGCGTATACTTGCTCTCGCGCCGC
AGAGGGGGGGCATCTGGACATTCTTAAATGGGCCAGGGAGAATGGGTACC
CCTGGGACGTTTTGACTTGCTCTAGCGCCGCAAAGGGGGGGCATCTGGAG
GTTCTTACGTGGGCCAGGGAGAACGGGTGCCCCTGGAATGAGAAGACCTG
CTCTGGGGCTGCCGTGGGAGGGCATTTGGAGATCCTTAGGTGGGCGAGGG
AGAATGGGTGCTCCTGGAACGAGGAGACCTGCTCTGGGGCCGCAGTGTGG
GGGCATCTGGAGGTCCGTAGGTGGGCGGGGGAGACGGGGGCCCCCTGGGA
CGAGCG back to topCoding sequence (CDS) from alignment at S-ischiensis_contig8:3479839..3482094- >mRNA_S-ischiensis_contig8.19735.1 ID=mRNA_S-ischiensis_contig8.19735.1|Name=mRNA_S-ischiensis_contig8.19735.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2304bp|location=Sequence derived from alignment at S-ischiensis_contig8:3479839..3482094- (Schizocladia ischiensis KU_0333)
GCGGGCGCCCCACCGGTACGGGTGACTTGCGTGCGTGGCACTTGTAGGTG
GAAAACTTCCGGGAGACGGCCAAGGGCACAAGAACGGCCACTCATGGACT
TCCACCAACATTCCCGGCAGGGAACACAGGGCTGCGGGCCTGGAGTCGTG
TGGTCTGAACAGGCGGGCGCCCCACCGGTACGGGTGACTTGCGTGCGTGG
CACTTGTAGGTGGAAAACTTCCGGGAGACGGCCAAGGGCACAAGAACGGC
CACTCATGGACTTCCACCAACATTCCCGGCAGGGAACACAGGGCTGCGGG
CCTGGAGTCGTGTGGTCTGAACAGCACACAGAAATCATGGACAGCTTGAT
TGGACTGAATGGTCAAGTGCACTCCAGCAACCCTCTGCTGGACTCTGGCG
CTGTGCTGTCTCATTTGATCCAGTTCACATCGGCCAAGGAGTACTTGTTT
GTGGCTGGTGTGTCCCGGGCTTGGCGGGCCTCGTGGCTTTTTGAAGGGCG
CCGTTGTGAAACCAGCCTTTCGCGGGCCAGTGAAGCCGTGTCCCGTCTGT
CATGGGCACGGGACAGTGGTTGCCCGTGGAACGAGCTGACGTGTGCTGCA
ATTGCCGAGGAATCTCACCTGGATGTCCTCAAGTGGGCCAGGCAGAACGG
GTGCCCCTGGGACAGACGGGTCTTTGCAAATGCCGCATGGGGGGGGCATC
TGGAAGTTCTTAAGTGGGCCAGGGAGACTGGGTGCCCCTGGGACGAGCCA
GTCTGTGCAAGTGCCGCATGGAGGGGGCATCTGGATGTTGTTAAGTGGGC
CAGGGAGGATGGGTGCCCCTGGAACGTGGAGACCTGCATAAGGGCCATCA
TGGGAGGGCATTTGGAGGTCCTGAAGTGGGCCAGGAAGAACAGGTGCCCC
TGGGGCGAGTACATCTGTCCACGCACCGCGAGTTTTGGGCATCTGGAGGT
TCTTAAGTGGGCCAGGGAGAATGGGCGCCCCTGGGATGCGTATACTTGCT
CTCGCGCCGCAGAGGGGGGGCATCTGGACATTCTTAAATGGGCCAGGGAG
AATGGGTACCCCTGGGACGTTTTGACTTGCTCTAGCGCCGCAAAGGGGGG
GCATCTGGAGGTTCTTACGTGGGCCAGGGAGAACGGGTGCCCCTGGAATG
AGAAGACCTGCTCTGGGGCTGCCGTGGGAGGGCATTTGGAGATCCTTAGG
TGGGCGAGGGAGAATGGGTGCTCCTGGAACGAGGAGACCTGCTCTGGGGC
CGCAGTGTGGGGGCATCTGGAGGTCCGTAGGTGGGCGGGGGAGACGGGGG
CCCCCTGGGACGAGCACACAGAAATCATGGACAGCTTGATTGGACTGAAT
GGTCAAGTGCACTCCAGCAACCCTCTGCTGGACTCTGGCGCTGTGCTGTC
TCATTTGATCCAGTTCACATCGGCCAAGGAGTACTTGTTTGTGGCTGGTG
TGTCCCGGGCTTGGCGGGCCTCGTGGCTTTTTGAAGGGCGCCGTTGTGAA
ACCAGCCTTTCGCGGGCCAGTGAAGCCGTGTCCCGTCTGTCATGGGCACG
GGACAGTGGTTGCCCGTGGAACGAGCTGACGTGTGCTGCAATTGCCGAGG
AATCTCACCTGGATGTCCTCAAGTGGGCCAGGCAGAACGGGTGCCCCTGG
GACAGACGGGTCTTTGCAAATGCCGCATGGGGGGGGCATCTGGAAGTTCT
TAAGTGGGCCAGGGAGACTGGGTGCCCCTGGGACGAGCCAGTCTGTGCAA
GTGCCGCATGGAGGGGGCATCTGGATGTTGTTAAGTGGGCCAGGGAGGAT
GGGTGCCCCTGGAACGTGGAGACCTGCATAAGGGCCATCATGGGAGGGCA
TTTGGAGGTCCTGAAGTGGGCCAGGAAGAACAGGTGCCCCTGGGGCGAGT
ACATCTGTCCACGCACCGCGAGTTTTGGGCATCTGGAGGTTCTTAAGTGG
GCCAGGGAGAATGGGCGCCCCTGGGATGCGTATACTTGCTCTCGCGCCGC
AGAGGGGGGGCATCTGGACATTCTTAAATGGGCCAGGGAGAATGGGTACC
CCTGGGACGTTTTGACTTGCTCTAGCGCCGCAAAGGGGGGGCATCTGGAG
GTTCTTACGTGGGCCAGGGAGAACGGGTGCCCCTGGAATGAGAAGACCTG
CTCTGGGGCTGCCGTGGGAGGGCATTTGGAGATCCTTAGGTGGGCGAGGG
AGAATGGGTGCTCCTGGAACGAGGAGACCTGCTCTGGGGCCGCAGTGTGG
GGGCATCTGGAGGTCCGTAGGTGGGCGGGGGAGACGGGGGCCCCCTGGGA
CGAG back to top
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