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Homology
BLAST of mRNA_S-ischiensis_contig8.19720.1 vs. uniprot
Match: D7FYV7_ECTSI (Anaphase-promoting complex subunit 10 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYV7_ECTSI) HSP 1 Score: 260 bits (664), Expect = 5.350e-85 Identity = 131/198 (66.16%), Postives = 160/198 (80.81%), Query Frame = 1
Query: 31 FLGRRDIGKEAVWSLSTAKPGNGVEQLRDNNTETYWQSDGRQPHLVNIQFHKKVSVVEMSFYFDFNLDESYTPKKISIRAGNTFHDLVEVATKDLHEPVGWVRVPLRPASRGGGGEEFSSLGRRRRGGRGGRPRAALAHPLLRTHFLQICVVSMHQNGRDTHIRQVKVFGPRQPAAVHHDPSLPAFSSVEFEQFSVIR 624
++ RR+IG+EAVWSLS+AKPGNGV+QLRD++T+TYWQSDG QPHL+NIQFHKK++VVE++F+ DF+ DESYTPKK+SIRAG++FHDLVEV K+LHEPVGWVRVPL + GGGG +++ GG G P+LR HF+QICVV+MHQNGRDTHIRQVKVFGPR A+V HDPSL F S EFE F+ IR
Sbjct: 26 YVTRREIGREAVWSLSSAKPGNGVDQLRDDSTDTYWQSDGGQPHLINIQFHKKMTVVEIAFHLDFSSDESYTPKKLSIRAGSSFHDLVEVTVKELHEPVGWVRVPL--FAPGGGGA--AAIAADAAGGAEG--------PVLRAHFVQICVVAMHQNGRDTHIRQVKVFGPRL-ASVQHDPSLLEFISPEFETFACIR 210
BLAST of mRNA_S-ischiensis_contig8.19720.1 vs. uniprot
Match: F0XYN0_AURAN (Anaphase-promoting complex subunit 10 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XYN0_AURAN) HSP 1 Score: 226 bits (575), Expect = 1.030e-71 Identity = 118/202 (58.42%), Postives = 132/202 (65.35%), Query Frame = 1
Query: 43 RDIGKEAVWSLSTAKPGNGVEQLR--------DNNTETYWQSDGRQPHLVNIQFHKKVSVVEMSFYFDFNLDESYTPKKISIRAGNTFHDLVEVATKDLHEPVGWVRVPLRPASRGGGGEEFSSLGRRRRGGRGGRPRAALAHPLLRTHFLQICVVSMHQNGRDTHIRQVKVFGPRQPAAVHHDPSLPAFSSVEFEQFSVIR 624
R+IG EAVWSLSTAKPGNGVEQ+R D NTETYWQSDG QPHL+NIQFHKK+S+ EM+FY D+ LDESYTPKK+SIRAG TFHDLVEV DLHEP GWV V L S G G LR FLQ+CVVSMHQNGRDTH+RQ K+FGPR P V F+SV QF+V+R
Sbjct: 21 REIGDEAVWSLSTAKPGNGVEQIRAAPGGKRRDENTETYWQSDGGQPHLINIQFHKKMSISEMAFYLDYGLDESYTPKKMSIRAGTTFHDLVEVEVVDLHEPTGWVTVAL---SHGDG-------------------------KALRAFFLQVCVVSMHQNGRDTHVRQAKIFGPRTPIDVCAGKHAARFTSVALTQFAVLR 194
BLAST of mRNA_S-ischiensis_contig8.19720.1 vs. uniprot
Match: W7U0V1_9STRA (Anaphase-promoting complex, subunit 10/DOC domain protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U0V1_9STRA) HSP 1 Score: 219 bits (558), Expect = 9.410e-69 Identity = 113/212 (53.30%), Postives = 141/212 (66.51%), Query Frame = 1
Query: 43 RDIGKEAVWSLSTAKPGNGVEQLRDNNTETYWQSDGRQPHLVNIQFHKKVSVVEMSFYFDFNLDESYTPKKISIRAGNTFHDLVEVATKDLHEPVGWVRVPLRP--ASRGGGGEEFSSLGRRRRGGRGGRPRAALAHPL---LRTHFLQICVVSMHQNGRDTHIRQVKVFGPRQPAAVHHDPS-------------LPAFSSVEFEQFSVIR 624
RDIG EAVWSLSTAKPGNGVEQ+RD++ +TYWQSDG QPHL+N+QFHKK++++E+S Y D++LDESYTPKKISI+AG TFHDLVE+ T +L EP GWV+VP+R A R G + A P+ LR FLQI +++MHQNGRDTH+RQVKV+GPR A S +P F+S E QFS +R
Sbjct: 24 RDIGHEAVWSLSTAKPGNGVEQIRDDDMDTYWQSDGAQPHLINVQFHKKMTILEVSLYLDYSLDESYTPKKISIKAGTTFHDLVEIQTVNLKEPQGWVKVPVRNPYADRPSGVDTVGD--------------ATAGDPVGGVLRAFFLQISIIAMHQNGRDTHVRQVKVYGPRYSQASFCSHSRVEGIASLDTYGTMPEFTSAELAQFSTVR 221
BLAST of mRNA_S-ischiensis_contig8.19720.1 vs. uniprot
Match: A0A5D6Y3X3_9STRA (Anaphase-promoting complex subunit 10 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y3X3_9STRA) HSP 1 Score: 211 bits (538), Expect = 2.280e-66 Identity = 106/195 (54.36%), Postives = 131/195 (67.18%), Query Frame = 1
Query: 40 RRDIGKEAVWSLSTAKPGNGVEQLRDNNTETYWQSDGRQPHLVNIQFHKKVSVVEMSFYFDFNLDESYTPKKISIRAGNTFHDLVEVATKDLHEPVGWVRVPLRPASRGGGGEEFSSLGRRRRGGRGGRPRAALAHPLLRTHFLQICVVSMHQNGRDTHIRQVKVFGPRQPAAVHHDPSLPAFSSVEFEQFSVIR 624
RR++G EAVWSLSTAKPGNGV+QLRDNN +TYWQSDG QPHL+NIQF +K ++V ++ Y D+ LDESYTPKK+S+R G T HDL E+ T+ + EP GWV +PLR A + LRT FLQI VV+MHQNGRDTHIRQVKV+ PR+P + D S+P S+ +F FS IR
Sbjct: 7 RREVGDEAVWSLSTAKPGNGVDQLRDNNVDTYWQSDGSQPHLINIQFQRKTALVALALYLDYKLDESYTPKKLSLRCGATLHDLREIHTQSIAEPSGWVTIPLRAAD------------------------SDDTEAPLRTFFLQIAVVAMHQNGRDTHIRQVKVYAPREPNVL--DRSVPEPSTEQFWAFSCIR 175
BLAST of mRNA_S-ischiensis_contig8.19720.1 vs. uniprot
Match: K3WX17_GLOUD (Anaphase-promoting complex subunit 10 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WX17_GLOUD) HSP 1 Score: 211 bits (537), Expect = 3.120e-66 Identity = 104/195 (53.33%), Postives = 135/195 (69.23%), Query Frame = 1
Query: 40 RRDIGKEAVWSLSTAKPGNGVEQLRDNNTETYWQSDGRQPHLVNIQFHKKVSVVEMSFYFDFNLDESYTPKKISIRAGNTFHDLVEVATKDLHEPVGWVRVPLRPASRGGGGEEFSSLGRRRRGGRGGRPRAALAHPLLRTHFLQICVVSMHQNGRDTHIRQVKVFGPRQPAAVHHDPSLPAFSSVEFEQFSVIR 624
RR++G +AVWSLSTAKPGNGV+QLRDNN +TYWQSDG QPHL+N+QFHKK+++ E++ Y D+ LDESYTPKKISIR G+T HDL E+ + L EP GWV +PL + ++ + L+T FLQI +++MHQNGRDTHIRQVK++ PR+P A+ D SLP S+ +F FS IR
Sbjct: 7 RREVGDDAVWSLSTAKPGNGVDQLRDNNVDTYWQSDGSQPHLINVQFHKKMALKEIALYLDYKLDESYTPKKISIRCGSTVHDLKEIYAQSLAEPNGWVTIPLTASD-----DDDETP--------------------LQTFFLQIAIIAMHQNGRDTHIRQVKIYAPREPNAL--DRSLPEPSTEQFWAFSCIR 174
BLAST of mRNA_S-ischiensis_contig8.19720.1 vs. uniprot
Match: A0A067CDF0_SAPPC (Anaphase-promoting complex subunit 10 n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CDF0_SAPPC) HSP 1 Score: 211 bits (536), Expect = 4.580e-66 Identity = 107/195 (54.87%), Postives = 136/195 (69.74%), Query Frame = 1
Query: 40 RRDIGKEAVWSLSTAKPGNGVEQLRDNNTETYWQSDGRQPHLVNIQFHKKVSVVEMSFYFDFNLDESYTPKKISIRAGNTFHDLVEVATKDLHEPVGWVRVPLRPASRGGGGEEFSSLGRRRRGGRGGRPRAALAHPLLRTHFLQICVVSMHQNGRDTHIRQVKVFGPRQPAAVHHDPSLPAFSSVEFEQFSVIR 624
+R+IG EAVW+LSTAKPGNGV QLRD+N +TYWQSDG QPHL+NIQFHKK++V E++ Y D+ LDESYTP+KI+IRAG+TFHDLV++ T+ + EP GW +PL+ A +LG+ R LRT FLQI V+ MHQNGRDTHIRQVK++ PR A++ +P SSV F F+ IR
Sbjct: 3 KREIGDEAVWTLSTAKPGNGVHQLRDDNLDTYWQSDGVQPHLINIQFHKKMTVHEVALYLDYKLDESYTPRKIAIRAGSTFHDLVDIKTQTIVEPSGWTVIPLQQA--------LLALGQPSR------------EKPLRTFFLQIAVLGMHQNGRDTHIRQVKIYAPRVAASI--GAQIPEPSSVAFSSFASIR 175
BLAST of mRNA_S-ischiensis_contig8.19720.1 vs. uniprot
Match: A0A1W0A3Z8_9STRA (Anaphase-promoting complex subunit 10 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A3Z8_9STRA) HSP 1 Score: 209 bits (531), Expect = 2.630e-65 Identity = 109/195 (55.90%), Postives = 134/195 (68.72%), Query Frame = 1
Query: 43 RDIGKEAVWSLSTAKPGNGVEQLRDNNTETYWQSDGRQPHLVNIQFHKKVSVVEMSFYFDFNLDESYTPKKISIRAGNTFHDLVEVATKDLHEPVGWVRVPL-RPASRGGGGEEFSSLGRRRRGGRGGRPRAALAHPLLRTHFLQICVVSMHQNGRDTHIRQVKVFGPRQPAAVHHDPSLPAFSSVEFEQFSVIR 624
R++G EAVWSLSTAKPGNGV QLRD+N +TYWQSDG QPHL+NIQF KK++V E++ Y D LDESYTP+KISIRAG+TFHDLVE+ T+ + EP+GW+ + L +P S ++ G + LRT FLQI V+ MHQNGRDTHIRQVKVF PRQ D +P SS+EF F+ IR
Sbjct: 4 REVGDEAVWSLSTAKPGNGVYQLRDDNLDTYWQSDGVQPHLINIQFAKKMTVQEIAMYLDHKLDESYTPRKISIRAGSTFHDLVEIKTQTIVEPMGWITIQLMQPPS------HIANAG---------------SEKPLRTFFLQIAVMGMHQNGRDTHIRQVKVFAPRQSHLFGAD--IPEPSSIEFSSFATIR 175
BLAST of mRNA_S-ischiensis_contig8.19720.1 vs. uniprot
Match: A0A7S3AMX8_9EUKA (Anaphase-promoting complex subunit 10 n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AMX8_9EUKA) HSP 1 Score: 210 bits (534), Expect = 4.200e-65 Identity = 104/197 (52.79%), Postives = 134/197 (68.02%), Query Frame = 1
Query: 40 RRDIGKEAVWSLSTAKPGNGVEQLRDNNTETYWQSDGRQPHLVNIQFHKKVSVVEMSFYFDFNLDESYTPKKISIRAGNTFHDLVEVATKDLHEPVGWVRV--PLRPASRGGGGEEFSSLGRRRRGGRGGRPRAALAHPLLRTHFLQICVVSMHQNGRDTHIRQVKVFGPRQPAAVHHDPSLPAFSSVEFEQFSVIR 624
RR+IG++AVWSLSTAKPGNGVEQLRD++T+TYWQSDG QPHL+NIQF KK+ V E+ Y DF DESYTP KISIRAG TFHDL E+ ++L+EP GWV + P P S G + LLRTHF+Q+ +++ HQNGRDTHIRQ+K++ PR+ H LP F+S+ F+Q++ +R
Sbjct: 51 RREIGEQAVWSLSTAKPGNGVEQLRDDSTDTYWQSDGPQPHLINIQFPKKMRVHEIQIYTDFKHDESYTPSKISIRAGTTFHDLQEIHVEELNEPSGWVTILPPREPTSDTAPGSQ-----------------------LLRTHFIQVAILANHQNGRDTHIRQIKIYTPRKDMGQHM--GLPEFNSIAFQQYACLR 222
BLAST of mRNA_S-ischiensis_contig8.19720.1 vs. uniprot
Match: A0A7S3SUE3_EMIHU (Anaphase-promoting complex subunit 10 n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3SUE3_EMIHU) HSP 1 Score: 209 bits (531), Expect = 4.570e-65 Identity = 110/206 (53.40%), Postives = 133/206 (64.56%), Query Frame = 1
Query: 7 TDAGDPSHFLGRRDIGKEAVWSLSTAKPGNGVEQLRDNNTETYWQSDGRQPHLVNIQFHKKVSVVEMSFYFDFNLDESYTPKKISIRAGNTFHDLVEVATKDLHEPVGWVRVPLRPASRGGGGEEFSSLGRRRRGGRGGRPRAALAHPLLRTHFLQICVVSMHQNGRDTHIRQVKVFGPRQPAAVHHDPSLPAFSSVEFEQFSVIR 624
T G+ S +IG AVWSLSTAKPGNGVEQLRD++ TYWQSDG QPHLVNIQFH+K+ + + Y DF LDESYTP KISIR+G TFHDL E+ ++LHEP GW + GGGE GG P LRTHF+Q+ V++ HQNGRDTHIRQ+K++ PR+ H D LP FSSV F+QF +R
Sbjct: 9 TPQGESSADKDECEIGDLAVWSLSTAKPGNGVEQLRDDDVNTYWQSDGPQPHLVNIQFHRKMVIHHIRVYTDFKLDESYTPAKISIRSGTTFHDLQEIHVQELHEPSGWHTILPTIEQAAGGGEG------------GGGP--------LRTHFIQVAVLANHQNGRDTHIRQIKIYTPRRLMGRHMD--LPHFSSVAFQQFECLR 192
BLAST of mRNA_S-ischiensis_contig8.19720.1 vs. uniprot
Match: A0A485KIW7_9STRA (Anaphase-promoting complex subunit 10 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KIW7_9STRA) HSP 1 Score: 208 bits (529), Expect = 5.280e-65 Identity = 107/195 (54.87%), Postives = 130/195 (66.67%), Query Frame = 1
Query: 40 RRDIGKEAVWSLSTAKPGNGVEQLRDNNTETYWQSDGRQPHLVNIQFHKKVSVVEMSFYFDFNLDESYTPKKISIRAGNTFHDLVEVATKDLHEPVGWVRVPLRPASRGGGGEEFSSLGRRRRGGRGGRPRAALAHPLLRTHFLQICVVSMHQNGRDTHIRQVKVFGPRQPAAVHHDPSLPAFSSVEFEQFSVIR 624
+R+IG EAVW+LS+AKPGNGV QLRD+N +TYWQSDG QPHL+NIQFHKK+++ E++ Y D+ LDESYTPK + IRAG TFHDLV++ + EP GWV +PL G AA P LRT FLQI V MHQNGRDTHIRQVKVF PRQ A + D + P S+V+F F+ IR
Sbjct: 3 KREIGDEAVWTLSSAKPGNGVHQLRDDNMDTYWQSDGPQPHLINIQFHKKMTIREVALYLDYKLDESYTPKMLMIRAGTTFHDLVDIKAHTIAEPNGWVTIPLTQTVVSGA--------------------AAFEKP-LRTFFLQISVTGMHQNGRDTHIRQVKVFAPRQTALLGLD-AAPEPSTVDFSSFACIR 175
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 158.3 |
| Seed ortholog evalue | 2.6e-36 |
| Seed eggNOG ortholog | 2880.D7FYV7 |
| Preferred name | ANAPC10 |
| KEGG rclass | RC00090,RC00166,RC01100 |
| KEGG ko | ko:K03357,ko:K11788 |
| KEGG Reaction | R04144,R04208 |
| KEGG Pathway | ko00230,ko01100,ko01110,ko01130,ko04110,ko04111,ko04113,ko04114,ko04120,ko04914,ko05166,map00230,map01100,map01110,map01130,map04110,map04111,map04113,map04114,map04120,map04914,map05166 |
| KEGG Module | M00048,M00389 |
| GOs | GO:0000151,GO:0000152,GO:0000209,GO:0000278,GO:0003674,GO:0003824,GO:0004842,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005680,GO:0005737,GO:0005739,GO:0005829,GO:0006275,GO:0006323,GO:0006325,GO:0006333,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0006996,GO:0007049,GO:0007113,GO:0008150,GO:0008152,GO:0008156,GO:0008283,GO:0009056,GO:0009057,GO:0009888,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009987,GO:0010087,GO:0010498,GO:0010556,GO:0010558,GO:0010564,GO:0010604,GO:0010605,GO:0010948,GO:0016043,GO:0016567,GO:0016604,GO:0016740,GO:0019219,GO:0019222,GO:0019538,GO:0019787,GO:0019941,GO:0022607,GO:0030163,GO:0030234,GO:0031145,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031396,GO:0031398,GO:0031399,GO:0031401,GO:0031461,GO:0031497,GO:0031974,GO:0031981,GO:0032268,GO:0032270,GO:0032446,GO:0032502,GO:0032875,GO:0032876,GO:0032991,GO:0036211,GO:0043085,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043632,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0045595,GO:0045786,GO:0045934,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048856,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0051173,GO:0051246,GO:0051247,GO:0051276,GO:0051338,GO:0051347,GO:0051438,GO:0051443,GO:0051603,GO:0051726,GO:0060255,GO:0061630,GO:0061659,GO:0065007,GO:0065009,GO:0070013,GO:0070647,GO:0070979,GO:0071103,GO:0071704,GO:0071840,GO:0080090,GO:0090329,GO:0098772,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1903320,GO:1903322,GO:1904666,GO:1904668,GO:1990234,GO:2000104,GO:2000112,GO:2000113,GO:2000736 |
| EggNOG free text desc. | anaphase-promoting complex-dependent catabolic process |
| EggNOG OGs | COG5156@1,KOG3437@2759 |
| EC | 6.3.3.1,6.3.4.13 |
| COG Functional cat. | DO |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko00002,ko01000,ko03036,ko04121 |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | Putative subunit of the Anaphase Promoting Complex |
| Ec32 ortholog | Ec-19_002640.1 |
| Exons | 6 |
| Model size | 691 |
| Cds size | 423 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622817299.0819433-UTR-S-ischiensis_contig8:3353857..3353921 | 1622817299.0819433-UTR-S-ischiensis_contig8:3353857..3353921 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig8 3353858..3353921 - |
| 1695741006.9469974-UTR-S-ischiensis_contig8:3353857..3353921 | 1695741006.9469974-UTR-S-ischiensis_contig8:3353857..3353921 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig8 3353858..3353921 - |
| 1622817299.1514678-UTR-S-ischiensis_contig8:3360798..3360857 | 1622817299.1514678-UTR-S-ischiensis_contig8:3360798..3360857 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig8 3360799..3360857 - |
| 1695741007.0233262-UTR-S-ischiensis_contig8:3360798..3360857 | 1695741007.0233262-UTR-S-ischiensis_contig8:3360798..3360857 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig8 3360799..3360857 - |
| 1622817299.162605-UTR-S-ischiensis_contig8:3362417..3362562 | 1622817299.162605-UTR-S-ischiensis_contig8:3362417..3362562 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig8 3362418..3362562 - |
| 1695741007.034403-UTR-S-ischiensis_contig8:3362417..3362562 | 1695741007.034403-UTR-S-ischiensis_contig8:3362417..3362562 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig8 3362418..3362562 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622817299.0945835-CDS-S-ischiensis_contig8:3353921..3354023 | 1622817299.0945835-CDS-S-ischiensis_contig8:3353921..3354023 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 3353922..3354023 - |
| 1695741006.9614747-CDS-S-ischiensis_contig8:3353921..3354023 | 1695741006.9614747-CDS-S-ischiensis_contig8:3353921..3354023 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 3353922..3354023 - |
| 1622817299.1055603-CDS-S-ischiensis_contig8:3356228..3356392 | 1622817299.1055603-CDS-S-ischiensis_contig8:3356228..3356392 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 3356229..3356392 - |
| 1695741006.9721305-CDS-S-ischiensis_contig8:3356228..3356392 | 1695741006.9721305-CDS-S-ischiensis_contig8:3356228..3356392 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 3356229..3356392 - |
| 1622817299.1168854-CDS-S-ischiensis_contig8:3356557..3356615 | 1622817299.1168854-CDS-S-ischiensis_contig8:3356557..3356615 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 3356558..3356615 - |
| 1695741006.9820635-CDS-S-ischiensis_contig8:3356557..3356615 | 1695741006.9820635-CDS-S-ischiensis_contig8:3356557..3356615 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 3356558..3356615 - |
| 1622817299.1283863-CDS-S-ischiensis_contig8:3358991..3359057 | 1622817299.1283863-CDS-S-ischiensis_contig8:3358991..3359057 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 3358992..3359057 - |
| 1695741006.9961648-CDS-S-ischiensis_contig8:3358991..3359057 | 1695741006.9961648-CDS-S-ischiensis_contig8:3358991..3359057 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 3358992..3359057 - |
| 1622817299.140023-CDS-S-ischiensis_contig8:3360765..3360798 | 1622817299.140023-CDS-S-ischiensis_contig8:3360765..3360798 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 3360766..3360798 - |
| 1695741007.0129116-CDS-S-ischiensis_contig8:3360765..3360798 | 1695741007.0129116-CDS-S-ischiensis_contig8:3360765..3360798 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 3360766..3360798 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig8.19720.1 >prot_S-ischiensis_contig8.19720.1 ID=prot_S-ischiensis_contig8.19720.1|Name=mRNA_S-ischiensis_contig8.19720.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=141bp
MSFYFDFNLDESYTPKKISIRAGNTFHDLVEVATKDLHEPVGWVRVPLRP ASRGGGGEEFSSLGRRRRGGRGGRPRAALAHPLLRTHFLQICVVSMHQNG RDTHIRQVKVFGPRQPAAVHHDPSLPAFSSVEFEQFSVIR* back to topmRNA from alignment at S-ischiensis_contig8:3353858..3362562- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig8.19720.1 ID=mRNA_S-ischiensis_contig8.19720.1|Name=mRNA_S-ischiensis_contig8.19720.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=8705bp|location=Sequence derived from alignment at S-ischiensis_contig8:3353858..3362562- (Schizocladia ischiensis KU_0333) GCGATCACGGATGCCGGTGACCCATCCCATTTCCTGGGGCGCAGGGATAT
CGGGAAGGAGGCCGTATGGTCACTGTCCACGGCCAAGCCGGGCAACGGCG
TCGAGCAGCTGCGCGACAACAACACGGAGACCTACTGGCAATCAGGTGGG
CCGTGGGGCACCGAACCGAGCGCCAGGGCGTGAATGAGCTTAGGGCGTGG
TGTTGGCGCCTGGTAGTTGAGGACCTGGCCACGGCACCTCCCTCCGGCAT
TGGGAAGCCGTCGTGTGCTTTAAGTATATAGCAAGGCATGGCAGGTAGCC
CGCAGGAGGACAGGAGGGAGAAGATGGATAACCGCAGTGAATACAATTAG
CAGGTAAAAGTCGCCGTTTACTATCTTTGGCAAAAGGGGCAAGTCATTCA
TGATCAATGGTCTCTGAGCTACCGCAATCGGCGGAAGGTTATTACGTACT
TTAAGTTCTTGCCCACCTTTGAGTTCTTGCCGCAAAATTGTTTTGAATCA
GCCATGTGCTTCGTTAAATCTTTCACGTCGTTGAGTTATTGCCCCCCCTT
CCCATTTTTGCTTCAGTGGATTTTGCACCGTCCTAGAGATTTTGCACCCC
CTCCCATTTTTGCACTGGCAGCAGCTCGCCCTTTGTTGCGGGACTTTTTC
TCTTGTCTTTGTCGACGACGGCCTCCGACTTCTCCAGGTCCTTGAACCAC
TGCTGCACGTTCTGGCGACTGAGTAGGCCGGGCCACCGCCCCGCTGTGGG
GCCGGACCGCGGGTTCCGTCCTTGCCTGGCACCCCTCGACCTTCTCGAGG
GCATGCTTGGCTACCACAATTTTCGTGTCAGGTCGAAGGTTCTCTCCTTA
AGCTTGCCTCGTTGTTGGCAACTCTAGCTCGAACGGCGGGGGGCAGGGCG
CTTGGTGCTCGCTTCCCCTTCCGGGTGGGCCTTGCCACCCCCCGACCTTG
TGCAACCCGCGTTTCGATTTTGCCCGTCGAAGGCGTCTTGCCCTCGGGAA
GAAGGTGTACCAAACTCGGGACCCGACCGGCCAATGAAATTAGAGTTGTT
GCCCGTTGTTGAGTTATTGCCTTCGGAAGTTGATGCAGGTAACTCGCCGC
CCTTTTGATACATTTTGCATGCAATAACCTTCTGGCGAGCGCTAGAAATG
CACGCCTCGCCTTCTATCGCTGCTCCGACTCTCCCGCCACACGAAGCGTC
GGGCAGGCAGCCATCTCTGCAAGCCCGTCTTTTTTTTTTTGCCCGAAACA
ATACCCGAGGAGAAAACGAAGAAAATCTCGACCACCTCTGCCACCCAGCC
CTGCCTCGGAGTGATCACAACACTGTGTGTGAGTGGTGTGGGACCGCTGG
GTTAAACGAAACAGGTTTCCCTTTTGAGGGCAACGGTGCACTAACTATTC
ACTCGTTCCTTTGTTATACTGTGCCGTGGAGATTGCCAATCCTCCGCACA
TGATGCCCCCCCCCCCCCTCCCACCTTGGCTCTGCCGGGGGAGGGAGGGG
GCGTGCACCGTATCGGTCGAGGCCCGTGGTCAATGGTCTCGGGACTACGG
CAAGCAAATGTGATTGCACATATATCACTGTGCCGTAATGAACTATCTCC
CCCAACGGCAACAAAAAAAAGCTGGCTGAGACCTGCGCGAAGCTGTGCCC
AGCCCCATCCACTCACTCGCCCACCCGCCCGTCCCGTTGTCCCCCCCCCG
GCCAGATGGCCGGCAGCCTCACCTGGTGAACATCCAGTTCCACAAGAAGG
TGTCGGTGGTGGAGATGTCCTTCTACTTCGACTTCAATTTGGACGAGGTG
AGGCTTGCCCACCGCCGCCGCACCACGCTACAGCACTGTACTCTAGAGCT
GCGTAACACGAGTGCTGCTTGCATTGACGTGCTCGCGTCTAGAAGGGCAT
GCCGTGCGGCACCTGCTGTACTGTACTCGAGTGCACAGTCCCGAGACCAC
TTGATTCGGCCACGGGCACTTGCGTTGTGTGCGACGCGATTCGGTGCGAC
GCTTGCTCTGCTGCGCTGAGGGTTTGACATGACGTCGCCTCAGGTGACAT
GATGCTTGGAAGTATGGTACCACACCACATCGTCATATGATGTCGCATCA
CGGCTAGCAGAGCTTGCCGTAGGCAACTACTACACCAGCAGTCCTGAGAC
CGCCAAACACGAGCCTCGGCCGAGACAGGGCAGGCCCTCGCTCGCCCCTG
CTGGCAAGTCCAGGTTGCCCTGTTTACGTTAGAGTCAGTGCCTACGTCGC
TGCTCACTCCTCCTGCAGGAGGGAAAGCCCGCTGTTTTGATTTGGCTATA
TGGTATAGGTAGTAGTACTCAAACCGGTTTGGCTGCATCCGTGCATATAG
TGGGATAGCTGAGAGTCAATGCCAAACGAGCTGCTCCTGCAGGACGGCAA
ACCCAACAGTTTGACTTCCATATATAGCACTTCGAAGTATAGGTAGTAGT
ACTTCAATGGTTTGACCGTGTGCACGCATAGAGTGGGATAGTTGAGAGTC
AATGCCGAAAAAGCTGCTCCTGCAGGAGGGCAAACCCAAAGCGTGACTTT
GGGCTGTCTACTATACACGCCTTACAAGGTTATGTCGCAAGACAAGCCGA
TGAGTGCATACTACGTATGTACTTCAAAGTGACTTCAAAGTACTACTACT
TAGATGCCGGGGTTTGAGCAAGATTGCTCCGCTCTTGGGAGAGATCTGTG
GTTGATGCTCTCCGTAGTGAAGTGAGCACAATGTGAGGAGTACACAGCAA
TATACTCAGGTACCGGAGAAGAGGAGGAAGGCGTGCTACTGTTGTAGGTG
CGCATGATGCCACTGCAAGGGGCCCCGACGACGGACCTTCCTTCACGCGC
CGGGAAGGAGGGGCTAGAGAACAGGCAGGACGAGGAGGAGGAGCAGGAGG
GCAAGGACCACTGTGGAGCAGATGGCCTGTCGAGCTTTGTTATTCATGTC
TCTGACTCACGGGTCGCTCTGTCCCGGCCTGTAGAGCAAGGGGGGCTGGG
GAGGGCAGAGAGCAGAGAGAAGGGGAGAAAGAGGAGAGAGAGAGGGGATG
AGACAGAGGGGCCGGGGGAGAGAGAGGGGGCGGGGGAGGAGAGAGAGGGA
AGAAGATAAAGCGGGGGCGGGCGGGGGAGGGAAAGGAGTATATACATATA
TACTTCAAAGCATACATATCTCCGTTGCGGGGGCGGGGGGGGGGGGGGGG
GGAGGAGAAAGAGTATAGACATACAGAGCTCTATACTTCAAAGCATACAT
ATCTCCGTTGCGGTAGTGGGTCGAGGTCAATGTCCGTCCGGCTAGTGGCA
CCGGCGGGCCCAGTCAGTCAATGGCCGTATCATAAGCTTGCGGCTACGGC
AAGCAACTCACTATCCGCCCGCCCCGCCCATCCCGCCCGCCTTGCCCCGC
CCCGCGCCCTCCGCGTAAACTGGCTTTTGTCGTGGGCCGCCGCCGCCGCT
GTGCCCCCCTCCCGAAACGCGATCGATTGCTACATGGCCCCCGGCGGATG
GGCAGAGCTACACGCCCAAGAAGATCTCGATACGTGCCGGCAACACCTTC
CACGACCTGGTGGAGGTTGCGGTCAGTTGTGCAGGGGTTGGGGCGGCAGG
CGTGTGTGTGGGGGGGTCATTGCACGGCGTGTGTGTGTGTGTGTGTGTGT
TTTCTTTGCCTTTGCGCAGAAATCGTTTGCAGGCATCCACGGAGAGTCAG
GTGTCTTTTTCGCCCGGTGTTCTGCTTCAACCCCCTTGGTACATTCAACT
ATTACGTAGTACTATCAGGAACAACACGGGGCGAGGTGCGGGCCACGTCA
CTAGAGACCTCAGCAGTGGCCCTTCCTTCAACTACTAATACTACAGTATG
AGTACCTGTATACCTATACATATGTATGTGTGACTCACGTCGGGCTGGGT
TGTCATTCCCCCGTGTCCTGTGCCTGCCACCAACCGTCGGCCCGTGATGT
GCTGTGATGCCAAACTACAGGATATTAGAGTGCACATCACATCGCATCAC
AATACAAGACATCACATCACGTCGCAATGTGTGCACTCGTGTCGGGCAGG
GTTTTTATCACCCCGTGTCCTGTGCGTGACACCGACCGTCGGTCCAGCAC
GCTCCGTGCTGGGCCGGCGATCAGCCCCCGCAGGGGAACGCCCGCGGGGT
GCGTCAAGTCTGTAAGGCAGATGTTCGGCCATTGGCACAAGTACGAGCGT
CGAGGCGCGTGCTCTTGTGCGCTTGCTCACGGCGGTCCGGCAAGTAGGGG
TAGTGTACTACTGTACTGGCCTTGACGACCGGTGCCATGCGCCACAAGCA
CCGGTGTGTTGTGACGTCAAACTGCACCACACTACTACTAAAGTACTGCT
CCGCACAAAAATTTCCCCTGGCGAGCTAAGTAAGGGCCACTGCTGAGGTC
TCTAGTGACGTGGCCCGCACCTCGCCCCGTGTTGTTCCTGAGAATACTAC
AGTAAGGTGTTTGGACTGCACGTCGCATCACATCAGTGGCGCAAGCGTCG
CTTGCAATGTACGGCGCCCGGCGGGGCGCTGCAGCTCCCTGTCCGACCGA
CGCGCGTGCGCACGACGTCGAGCCGTGCTTTGCCGCCTTGGTCCCCGAGG
CCGGCGAGCAAGCGCAAGCGCCTCGACCGACACGGAGCAGCCAACCACCG
TGCTTAACCCTTCTGCTTGTTAACCCGGGTGTACATGGAACTATAGGGAT
TTAGTACAATATGCGTGTACACCCTCCCGGGGGTCAAAGGGTCAGTACTT
CATACCCGAGTCTCACACCAAACACGGGCGAAGAAGTTGAACCCTTCTGC
TTTTGTACCCAGGTCTAGGATACACAGAACTCTAGGGATGTAGTGTGCGT
GTGCACCCTCCCCCCCGGTGGCGGGAGGCCAAAGGGTTGATAAAGAGTAC
TTCGTACTTGTACTTCCGGAGGTAGTCGAGTTTTTTGTTTTGTTGTGTTT
TTTCACTGGTGGAACCTCACGTGGCTTACCAGGTTGCCATGAATGCCCAT
GTCTCATGCATGGAGTTGCAAATTACAGTAGAGTACGAGCTACTTCGTAC
ATGTCAGTCACTGCTGTACCCCGCCCACACCTGCATAGCATGGCACGTGG
CTTACGAGGGTAGGGAGGGGGCCCGCTCCCGTCGTCTCGGGGTCCACGCT
GTGCTTGCACGTGTGTATGTGTATGTACTCACACTGTGCTTGCCGTAGTC
CCGAGGCCATTGACCATGTGCCGTTGACGACAAAGCAATCTCACGAGTAC
GAGTACTGTACTTCGAAGTACATGTGTGTGTTGCCTGTACGCGTGCTTGT
GTAGTACTACTATAGTAGGTGTGAGTGCCGGTAGTTCAGGCAGGCGATCC
CCGCTGATGTGATGGATGTGCTGTGATGTCATGTGATGCGATGCCATGTG
ACGTGGTGTGATGTGATGTCACGTGCGCCCTAAACGGCGGCGTTAACAGG
AACAACACAGGGCGAGGCGCAGGCCATGCCAATAAAGATCCTCAACAGTG
GCCCTTCCTTAGCTCGCCAAGGCAGCAGTTTGGCGTCACATCACATCTCA
CCGCATCACATCACTTTCGCTTCACTTCAAGTCTACATCACACCACACCA
CACCGCATCATCACATTGCGCCACATCAGCGTCGCATCACATCACATCAC
ATCGCACCGCACGTGCGCGCCGTGATTCGATGCGGTATGCACTCTAATGC
ACTGTCTACTCTAGAGTAGTGCACCATAGTTTGACATCACATCACATCAC
ATCACATCACATCACACTTGCAGCAGTTCAGGCAGGACCTGCTGCTCCCT
GGCGCGGCCCGAGTATCGGACTCCCTCCTCTCCATCTCCATCCCTCCCTC
CCCTCTCCCCCCCCTCCCCCAGGGGCATCAGACAAGGAAGCTGAGTTGGG
CACTCCCTCGCCTCCATCCCCCCCCGCCCCCCCCCCGGTGGCATCAGACA
AAGGACCTTCACGAGCCGGTGGGCTGGGTGCGGGTCCCTCTGCGACCGGC
CAGCAGTGTGCTAGGGGGGGCGACGGGGCTAGGCTTGGGGGGCGGCGGCG
GCGACGATGATGACGACGGCGGCGGCGGTGGCGGCGGCGGCGGCGGCGGC
GGCGGCAGCGGCGGCGGCGGCACCGCCGCAGGGCCAGACGCCGGCGGCGA
AGGAGGGGCCGCAGAAGGAGGAGGTGGGGGAGGCGAGGAGTTTTCTTCCT
TGGGGAGGCGGAGGCGCGGGGGGCGGGGGGGGCGCCCGCGTGCGGCGCTG
GCGCACCCCCTGCTGCGGACCCACTTCCTGCAGATCTGCGTTGTGTCCAT
GCACCAGAACGGGAGGGACACGCACATTCGACAGGTCAGCATCGTTGTTG
GTGGTGGTGTGCCAACGCTGTCTGATCTATTGCAAGTCAGGGTATGCAGG
CTACTTGGAAGTATATACACGTGTACTCACGGCGTGCTTGCCATACTCTA
CAAGTCGTGCCTGAGAGAATTGTTCGAAACATCCCGAGTAGTTCGGGCAC
TGAGGCTTGAGATATACAAGTAGTTAAGAGAATGGGTTTCAAAGAACCCA
AGTAGTTTGGACACCTGAGGTTCGAGATGCCCAAGTAGTTAGGAGAACAA
GTTTCAAAGAACTTGGGCCAAGTGGTCCGGAGACTGAGTTTAAAAGAAAC
CAAGTAGTTAGGAAAATTGAGTTTCAAAGAACCCAAGTAGCTACTTCCGT
AGGTAGGATAATGAGTTTCAAAGAACCCATGTACAGTACTCCGGAGACTG
AGATTCAAGATAGCCAAGCAGTTCGGAGACCGTGCATATATTTCCAAGCG
AGCGCAGTACGCATTCGTCAGGCAGTTTCGGTGGCGGTGCATATTTCCAA
GCGAGTACAGTACGCATTCGTACAGTACGGTACTCACCTCGTGCTTGCCG
TGGCTACAGTCGTCCCGAGACCATGGAGCAAACGCTTCAAAGCGCTTTGT
GCGGCAACTACGTACATACCACATGTGTGGTGTCGCTCGGTAAGTACTCG
GGCAAGGTGTTTTCAGTCACCAGGTGCAGTAGGTCGGAGGCGGTACATTC
CCTAACCCAAGTAGTTTCCGAAGCTGGTACATAGCCAGAAGTACAGACAT
TGTGGTTGTGGGATACTGAAGTACCCGTATATACGTACCTCGTACTTCGA
CGTACATAGTTTGGAGGTCCGACGCGTTTTCAGTCTCCGGACACAGTATG
AACAGAGACAACACAGGGCGAGGTGCAGGCCACGTCACTAAAGACCTCAA
CAGTGGCCCTTCCTTAGCTCGCCAGGGCCAGGCGCAGTAGTTAGGAGGCG
ATAGTCATTCGTGATGTGATATTGCACCTCGAAGCATCAAACAACCCCCC
TCCCCTGGCGAGCAAAGGAAGGGCCACTGTTGAGGTCCTTAGCGATGTGG
CCTGCACCTCGCCCCGTGCTCTTCCTGTTAATGCGGCAGCAAGTTGGAGC
CTGAATCACGTAACATCACGCAAAATGCCTCCCGTGGGTTGTTGCCGGGG
GGGCTTGCGGCGCGCAACTATTGTGCACTTTGTTCGGTGCGCAGTAGCAT
CGTCAGGTAATCGGAACATGAGCTAGAATAGAACCGCAGCTGCCATGCGC
CTGCCCCCCCTCACTCACCCGACCTCATCGTATTCGTCGCCGTCGCCGTT
CTTTTGTCAGCGCGTCACACCTCGACGGGCTTGACGGCCGACTGACCGAC
TGGTGCGACAGCGGCTGTAATAGGATTGCATGCACTGTGCTGTGCTGTGC
TGTGCTGTGCTGTACTCGAGTATACGAGTACTGTACTCACTCTGCTCTAC
TCTACGCACTTGCTGTATCAACTCTAGCTACTGTTCCTGTCCTGTACTGC
ACAAGATACTACTTCCAAGTACACGGTACTGCTGCACTGTGCTGTACTGC
ACTGTACAGTGTCTCTGTGCAGTACTACATACAGCACCTACTGTGCTGTA
CTGTACTGCACTGTACTAGGTGTGCGCCGCCGCCCTGACAGGCCAATTGT
ACGCTCTCTTACTGTTAGTGTTGCTTCCAAGTGCACAAAACACTACTGTA
ACACTAACGGGCAGCAGCGTGTCCCTGCTCCCCCCCCACCACCAACCCTG
CCTCGTTGCCTCATCTTTGTTTTCCGTGCGCGCACGCGTCATGCCTACGA
AGGACTGAGGGGATCTAGCGATCCAGTGGATCCACCCACCCATCCATTGG
GGCTGTGAACTGGTGCCAGTTTTTACCGGTCGGTACCGGTTAACTGGCTT
AACCGGAAAAACCGGCGCCAGCTAACTGGCTTAGCCGGTTAACCGACCGG
TGGCCAATCGTGTTGCCGGAGCAGGTGACACGACCGTTATTCGTTGATAT
TATACATTAGCCGCTACTGACAAGCGGCTAGAACTGAACGGTCACAAGAC
CGGTTAGCTGGGCCCTGAACTCGCGCAAGTAGGAACACCTCTCCTTTCCC
ACCCGCTTGTTTTATCTTCGTGCCAAAGTTAAACTAGTAGGCCTTGCCAT
TTCATAGCTCTACCATCCGCCCATCCATCCACCCCTCAGGTGAAGGTTTT
CGGGCCTCGGCAGCCCGCGGCGGTGCACCACGACCCTTCCCTCCCGGCCT
TCAGCTCCGTCGAGTTCGAGCAGTTTTCTGTCATACGGTGACGCAGGGCG
AGGGGACTCCGCCGCCACCGCCGCCACCGCCGCCGCCGCCGCAGCTACAA
CCCCC back to topCoding sequence (CDS) from alignment at S-ischiensis_contig8:3353858..3362562- >mRNA_S-ischiensis_contig8.19720.1 ID=mRNA_S-ischiensis_contig8.19720.1|Name=mRNA_S-ischiensis_contig8.19720.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=846bp|location=Sequence derived from alignment at S-ischiensis_contig8:3353858..3362562- (Schizocladia ischiensis KU_0333) ATGTCCTTCTACTTCGACTTCAATTTGGACGAGATGTCCTTCTACTTCGA CTTCAATTTGGACGAGAGCTACACGCCCAAGAAGATCTCGATACGTGCCG GCAACACCTTCCACGACCTGGTGGAGGTTGCGAGCTACACGCCCAAGAAG ATCTCGATACGTGCCGGCAACACCTTCCACGACCTGGTGGAGGTTGCGAC AAAGGACCTTCACGAGCCGGTGGGCTGGGTGCGGGTCCCTCTGCGACCGG CCAGCAACAAAGGACCTTCACGAGCCGGTGGGCTGGGTGCGGGTCCCTCT GCGACCGGCCAGCAGAGGTGGGGGAGGCGAGGAGTTTTCTTCCTTGGGGA GGCGGAGGCGCGGGGGGCGGGGGGGGCGCCCGCGTGCGGCGCTGGCGCAC CCCCTGCTGCGGACCCACTTCCTGCAGATCTGCGTTGTGTCCATGCACCA GAACGGGAGGGACACGCACATTCGACAGGAGGTGGGGGAGGCGAGGAGTT TTCTTCCTTGGGGAGGCGGAGGCGCGGGGGGCGGGGGGGGCGCCCGCGTG CGGCGCTGGCGCACCCCCTGCTGCGGACCCACTTCCTGCAGATCTGCGTT GTGTCCATGCACCAGAACGGGAGGGACACGCACATTCGACAGGTGAAGGT TTTCGGGCCTCGGCAGCCCGCGGCGGTGCACCACGACCCTTCCCTCCCGG CCTTCAGCTCCGTCGAGTTCGAGCAGTTTTCTGTCATACGGTGAGTGAAG GTTTTCGGGCCTCGGCAGCCCGCGGCGGTGCACCACGACCCTTCCCTCCC GGCCTTCAGCTCCGTCGAGTTCGAGCAGTTTTCTGTCATACGGTGA back to top
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