mRNA_S-ischiensis_contig8.19718.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig8.19718.1 vs. uniprot
Match: D7G3G9_ECTSI (Bifunctional Aldehyde Dehydrogenase/Phosphoglucomutase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3G9_ECTSI) HSP 1 Score: 164 bits (416), Expect = 2.770e-40 Identity = 80/153 (52.29%), Postives = 103/153 (67.32%), Query Frame = 1
Query: 22 LVSRLGDLRRVYGEFCESNGYVRCGDPEVVSKVFRRLRNGGSYLPQCGPFAVTGVRDLSPGHAHDSSAEGGRPALPLVRVGEEMVTLRLGGEGAVVTLRTSGTEPKIKYYAQVQGRPGEAGEEVKARLSKLADAVVDEVIQPRRWGLVRSQLA 480
L+ R+ L + YGEF E NGYVRC D EVVSK+F+RLR GSY G + V+ VRDL+ GH DS G+P+LP+V G +T + EG V TLRTSGTEPKIK+Y + QGRPG EEV A+LS+LA +++ +Q +RWG+ R LA
Sbjct: 755 LLRRVQALHKRYGEFAEENGYVRCEDTEVVSKIFQRLRGSGSYRSSFGGYRVSAVRDLAEGHGFDSETPDGQPSLPVVAGGAHFLTFKFEEEGVVATLRTSGTEPKIKFYLEKQGRPGVPLEEVSAQLSELAAVFLEDALQLKRWGMKRVALA 907
BLAST of mRNA_S-ischiensis_contig8.19718.1 vs. uniprot
Match: A0A6H5K128_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K128_9PHAE) HSP 1 Score: 163 bits (413), Expect = 6.380e-40 Identity = 82/153 (53.59%), Postives = 103/153 (67.32%), Query Frame = 1
Query: 22 LVSRLGDLRRVYGEFCESNGYVRCGDPEVVSKVFRRLRNGGSYLPQCGPFAVTGVRDLSPGHAHDSSAEGGRPALPLVRVGEEMVTLRLGGEGAVVTLRTSGTEPKIKYYAQVQGRPGEAGEEVKARLSKLADAVVDEVIQPRRWGLVRSQLA 480
L+ RL L + YGEF E NGYVRC D EVVSK+F+RLR GSY G + VT VRDL+ GH DS G+P+LP+V G +T + EG V TLRTSGTEPKIK+Y + QGRPG E+V A+LS+LA ++E +Q +RWG+ R LA
Sbjct: 722 LLRRLQALHKRYGEFAEENGYVRCEDTEVVSKIFQRLRGSGSYPSSFGGYRVTAVRDLAEGHGFDSETPDGQPSLPVVAGGAHFLTFKFE-EGVVATLRTSGTEPKIKFYLEKQGRPGVPLEDVSAQLSELATVFLEEALQLKRWGMKRVALA 873
BLAST of mRNA_S-ischiensis_contig8.19718.1 vs. uniprot
Match: A0A3R7K2H8_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7K2H8_9STRA) HSP 1 Score: 125 bits (314), Expect = 2.630e-27 Identity = 68/147 (46.26%), Postives = 85/147 (57.82%), Query Frame = 1
Query: 22 LVSRLGDLRRVYGEFCESNGYVRCGDPEVVSKVFRRLRNGGSYLPQCGPFAVTGVRDLSPGHAHDSSAEGGRPALPLVRVGEEMVTLRLGGEGAVVTLRTSGTEPKIKYYAQVQGRPGEAGEEVKARLSKLADAVVDEVIQPRRWGL 462
+V L L YG F N YV+C DP V +F RLRN G Y P CG FA+T VRDL+ G+ DS+ R LP V EM+T G V TLRTSGTEPK+KYY ++ GR G+ EEV L K + +V+ ++QP GL
Sbjct: 460 VVQHLNALYERYGHFVTQNHYVKCYDPVKVRTIFERLRNNGKYWPSCGDFAITHVRDLTTGY--DSAQSDKRAVLP-VNNSTEMITYTFAN-GCVATLRTSGTEPKLKYYVELAGRVGQTREEVTRELRKQVEQIVELMLQPEVNGL 602
BLAST of mRNA_S-ischiensis_contig8.19718.1 vs. uniprot
Match: A0A7S0CJQ2_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CJQ2_9STRA) HSP 1 Score: 117 bits (292), Expect = 1.620e-26 Identity = 56/149 (37.58%), Postives = 91/149 (61.07%), Query Frame = 1
Query: 22 LVSRLGDLRRVYGEFCESNGYVRCGDPEVVSKVFRRLRNGGSYLPQCGPFAVTGVRDLSPGHAHDSSAEGGRPALPLVRVGEEMVTLRLGGEGAVVTLRTSGTEPKIKYYAQVQGRPGEAGEEVKARLSKLADAVVDEVIQPRRWGLVR 468
+V L L +YGEF +NGY C DP VV ++ +LRNGG YL + G + + +RDL + +DS+ +P LP + M+TL G + +R SGTEPK+KYY ++ G+PG + + V+ L ++D +++E+++P + GLV+
Sbjct: 92 MVQYLQSLCDIYGEFVTNNGYYYCHDPTVVFQIMAKLRNGGKYLSKVGLYTIQSIRDLG-AYPYDSTTLDHKPTLPTSKT-SPMITLTFTN-GCITQIRASGTEPKLKYYIELPGKPGVSKKMVQEELDIMSDVLLEELLEPTKHGLVK 237
BLAST of mRNA_S-ischiensis_contig8.19718.1 vs. uniprot
Match: A0A0N7L6W0_PLAHL (Uncharacterized protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L6W0_PLAHL) HSP 1 Score: 122 bits (305), Expect = 3.930e-26 Identity = 66/145 (45.52%), Postives = 86/145 (59.31%), Query Frame = 1
Query: 16 GCLVSR-LGDLRRVYGEFCESNGYVRCGDPEVVSKVFRRLRNGGSYLPQCGPFAVTGVRDLSPGHAHDSSAEGGRPALPLVRVGEEMVTLRLGGEGAVVTLRTSGTEPKIKYYAQVQGRPGEAGEEVKARLSKLADAVVDEVIQP 447
G VS+ L L +G F N YV+C DPE + +F RLRN G Y CG FA+TGVRDL+ G+ DSS R LP V EM+T G + TLRTSGTEPK+KYY ++ GR G+ EEV + L K +++ ++QP
Sbjct: 456 GMTVSQHLQTLYERHGHFVTHNHYVKCNDPEKIRSIFARLRNNGEYWQSCGDFAITGVRDLTTGY--DSSQPDKRAVLP-VSDSTEMITYTFAN-GCIATLRTSGTEPKLKYYVELAGRVGQTREEVTSELEKQVKQILELMLQP 596
BLAST of mRNA_S-ischiensis_contig8.19718.1 vs. uniprot
Match: W2LLC0_PHYPR (Uncharacterized protein n=19 Tax=Phytophthora TaxID=4783 RepID=W2LLC0_PHYPR) HSP 1 Score: 121 bits (304), Expect = 5.330e-26 Identity = 66/143 (46.15%), Postives = 83/143 (58.04%), Query Frame = 1
Query: 34 LGDLRRVYGEFCESNGYVRCGDPEVVSKVFRRLRNGGSYLPQCGPFAVTGVRDLSPGHAHDSSAEGGRPALPLVRVGEEMVTLRLGGEGAVVTLRTSGTEPKIKYYAQVQGRPGEAGEEVKARLSKLADAVVDEVIQPRRWGL 462
L L YG F N YV+C DP + +F RLRN G Y CG FA+T VRDL+ G+ DSS R LP V EM+T G V TLRTSGTEPK+KYY ++ GR G+ EEV L K + +V+ ++QP+ GL
Sbjct: 464 LNALYERYGHFVTQNHYVKCYDPVKIRAIFERLRNNGKYWESCGDFAITHVRDLTTGY--DSSQTDKRAVLP-VSSSTEMITYTFAN-GCVATLRTSGTEPKLKYYVELAGRVGQTREEVTLELQKQVEQIVELMLQPKDNGL 602
BLAST of mRNA_S-ischiensis_contig8.19718.1 vs. uniprot
Match: M4BKM1_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BKM1_HYAAE) HSP 1 Score: 121 bits (304), Expect = 5.330e-26 Identity = 66/147 (44.90%), Postives = 84/147 (57.14%), Query Frame = 1
Query: 22 LVSRLGDLRRVYGEFCESNGYVRCGDPEVVSKVFRRLRNGGSYLPQCGPFAVTGVRDLSPGHAHDSSAEGGRPALPLVRVGEEMVTLRLGGEGAVVTLRTSGTEPKIKYYAQVQGRPGEAGEEVKARLSKLADAVVDEVIQPRRWGL 462
+ L L YG F N YV+C DP + +F RLRNGG Y CG +A++ VRDL+ G+ DSS R LP V EM+T G V TLRTSGTEPK+KYY ++ GR G+ EEV L K VV +++QP+ GL
Sbjct: 460 VAQHLSALYGRYGYFVTQNHYVKCYDPVKIRAIFERLRNGGKYWDSCGDYAISHVRDLTTGY--DSSQPDKRAVLP-VSSSTEMITYTFAN-GCVATLRTSGTEPKLKYYVELAGRVGQTCEEVTVELRKQVTQVVQQMLQPKENGL 602
BLAST of mRNA_S-ischiensis_contig8.19718.1 vs. uniprot
Match: A0A662WHP8_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WHP8_9STRA) HSP 1 Score: 120 bits (302), Expect = 9.960e-26 Identity = 66/150 (44.00%), Postives = 84/150 (56.00%), Query Frame = 1
Query: 22 LVSRLGDLRRVYGEFCESNGYVRCGDPEVVSKVFRRLRNGGSYLPQCGPFAVTGVRDLSPGHAHDSSAEGGRPALPLVRVGEEMVTLRLGGEGAVVTLRTSGTEPKIKYYAQVQGRPGEAGEEVKARLSKLADAVVDEVIQPRRWGLVRS 471
+ L L YG F N YV+C DPE +F RLRN G Y P+CG FA+ VRDL+ G+ DS+ R LP V EM+T G V TLRTSGTEPK+KYY ++ GR G+ EEV L +V+ ++QP GL +S
Sbjct: 463 VAQHLTALYERYGHFVTQNHYVKCYDPEKTRAIFTRLRNNGEYWPKCGDFAIAHVRDLTTGY--DSAQPDKRAVLP-VSSSSEMITYTFAN-GCVATLRTSGTEPKLKYYVELAGRVGQTREEVVKELKLQVQQIVELMLQPEANGLEQS 608
BLAST of mRNA_S-ischiensis_contig8.19718.1 vs. uniprot
Match: A0A2D4C2D5_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C2D5_PYTIN) HSP 1 Score: 118 bits (295), Expect = 4.210e-25 Identity = 61/149 (40.94%), Postives = 85/149 (57.05%), Query Frame = 1
Query: 22 LVSRLGDLRRVYGEFCESNGYVRCGDPEVVSKVFRRLRNGGSYLPQCGPFAVTGVRDLSPGHAHDSSAEGGRPALPLVRVGEEMVTLRLGGEGAVVTLRTSGTEPKIKYYAQVQGRPGEAGEEVKARLSKLADAVVDEVIQPRRWGLVR 468
+ L L YG F N YV+C +P V +++F RLRNGG Y CG F + +RDL+ G+ DS R LP V M+T + G V TLRTSGTEPK+KYY ++ G+ G+ EEV A L++ + +V+ ++QP L R
Sbjct: 356 VAQHLTSLYERYGHFVTQNHYVKCYEPAVTARIFERLRNGGKYWTHCGDFEIAHIRDLTTGY--DSEQPDKRAVLP-VSSSSHMITYKFTN-GCVATLRTSGTEPKLKYYVELAGKVGQTREEVTATLARQVEQIVELMLQPTENNLER 500
BLAST of mRNA_S-ischiensis_contig8.19718.1 vs. uniprot
Match: A0A3M6VPV5_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VPV5_9STRA) HSP 1 Score: 118 bits (295), Expect = 7.830e-25 Identity = 65/143 (45.45%), Postives = 82/143 (57.34%), Query Frame = 1
Query: 34 LGDLRRVYGEFCESNGYVRCGDPEVVSKVFRRLRNGGSYLPQCGPFAVTGVRDLSPGHAHDSSAEGGRPALPLVRVGEEMVTLRLGGEGAVVTLRTSGTEPKIKYYAQVQGRPGEAGEEVKARLSKLADAVVDEVIQPRRWGL 462
L L YG F N YV+C DP +F RLRNGG Y CG FA+T VRDL+ G+ DS R LP V EM+T + G V TLRTSGTEPK+KYY ++ G G+ EEV L K + +V+ ++QP+ GL
Sbjct: 464 LNALYERYGHFVTQNHYVKCYDPVKTRAIFERLRNGGKYWKTCGDFAITHVRDLTTGY--DSFQPDKRAVLP-VSSSTEMITYTIAN-GCVATLRTSGTEPKLKYYVELAGCVGQTREEVTLELRKQVEQIVELMLQPKENGL 602 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19718.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig8.19718.1 >prot_S-ischiensis_contig8.19718.1 ID=prot_S-ischiensis_contig8.19718.1|Name=mRNA_S-ischiensis_contig8.19718.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=161bp EGDGAGCLVSRLGDLRRVYGEFCESNGYVRCGDPEVVSKVFRRLRNGGSYback to top mRNA from alignment at S-ischiensis_contig8:3339414..3343044+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig8.19718.1 ID=mRNA_S-ischiensis_contig8.19718.1|Name=mRNA_S-ischiensis_contig8.19718.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=3631bp|location=Sequence derived from alignment at S-ischiensis_contig8:3339414..3343044+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig8:3339414..3343044+ >mRNA_S-ischiensis_contig8.19718.1 ID=mRNA_S-ischiensis_contig8.19718.1|Name=mRNA_S-ischiensis_contig8.19718.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=966bp|location=Sequence derived from alignment at S-ischiensis_contig8:3339414..3343044+ (Schizocladia ischiensis KU_0333)back to top |