mRNA_S-ischiensis_contig8.19708.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig8.19708.1 vs. uniprot
Match: A0A8K0C415_9COLE (Uncharacterized protein n=1 Tax=Ignelater luminosus TaxID=2038154 RepID=A0A8K0C415_9COLE) HSP 1 Score: 64.3 bits (155), Expect = 2.550e-9 Identity = 47/138 (34.06%), Postives = 75/138 (54.35%), Query Frame = 1
Query: 1 EIGGAIQVDWDENGRLVPNEASREIGGRDLEEEQTFEEIEEDVDSRATSTSFISREATAP-WSVAQTQAFYRGLQRYGTDFSMMEEAFAGRTRAQLKNKYKKELRLRAELVTKALRTPI---------DSTEELFVEE 384
+IG ++ DE ++ NE ++ R+ EE Q + ++ D D T RE + WS +T FY+ L GTDF++M E F+GR+R +LK K+KKE R+ L+ KAL P+ ++ E+LF+E+
Sbjct: 361 KIGANGEIVIDEKSLIIENEETK----RNREEIQKSKIVDGDFD---TGYGIYKREKRSKDWSKEETLRFYKALNTLGTDFTLMVELFSGRSRRELKMKFKKEERVNRPLIDKALTQPVRFDITELRKEAEEQLFIEQ 491
BLAST of mRNA_S-ischiensis_contig8.19708.1 vs. uniprot
Match: A0A2K1J0E1_PHYPA (SANT domain-containing protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1J0E1_PHYPA) HSP 1 Score: 62.4 bits (150), Expect = 1.090e-8 Identity = 35/95 (36.84%), Postives = 56/95 (58.95%), Query Frame = 1
Query: 37 NGRLVPNEASREIGGR--DLEEEQTFEEIEEDVDSRATSTSFISREATAPWSVAQTQAFYRGLQRYGTDFSMMEEAFAGRTRAQLKNKYKKELRL 315
NGR+V N+ S +G + E+ T++ +EED + S+ +R W T FY+ L+++GTDF +++ F GRTR Q+K+K+K E RL
Sbjct: 153 NGRIVINQQSLVVGAQASTREDTNTYQRVEEDR-PKLNYNSYSNRTPVERWKQEDTDLFYKALEQFGTDFELIQNLFPGRTRKQVKSKFKNEERL 246
BLAST of mRNA_S-ischiensis_contig8.19708.1 vs. uniprot
Match: A0A7S0UVF8_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Polytomella parva TaxID=51329 RepID=A0A7S0UVF8_9CHLO) HSP 1 Score: 62.4 bits (150), Expect = 1.090e-8 Identity = 37/102 (36.27%), Postives = 58/102 (56.86%), Query Frame = 1
Query: 37 NGRLVPNEASREIGGRDLEEEQTFEEIEEDVDSRATSTSFISREATAPWSVAQTQAFYRGLQRYGTDFSMMEEAFAGRTRAQLKNKYKKELRLRAELVTKAL 342
NG++V + S + + + + + ED T T R+A A WS +T FYRGLQR+G+DFS++ + F R R Q+K+KY+KEL+ + V + L
Sbjct: 275 NGQVVLDTTSLTVASQAATDLSDYRRVVEDTRLINTFTYMNRRQAKA-WSAEETHLFYRGLQRFGSDFSLINQIFPDRDRRQIKSKYQKELKTNRDAVERVL 375
BLAST of mRNA_S-ischiensis_contig8.19708.1 vs. uniprot
Match: B9RH85_RICCO (SANT domain-containing protein n=10 Tax=Ricinus communis TaxID=3988 RepID=B9RH85_RICCO) HSP 1 Score: 62.4 bits (150), Expect = 1.230e-8 Identity = 32/65 (49.23%), Postives = 45/65 (69.23%), Query Frame = 1
Query: 151 SFISREATAPWSVAQTQAFYRGLQRYGTDFSMMEEAFAGRTRAQLKNKYKKELRLRAELVTKALR 345
SF+ + TA WS +T+ FY G+Q++GTD SM+++ F GRTR Q+K KYKKE R ++ ALR
Sbjct: 844 SFMDKTPTARWSKQETELFYEGIQQFGTDLSMIQQLFPGRTRHQIKLKYKKEERQHPLRLSDALR 908
BLAST of mRNA_S-ischiensis_contig8.19708.1 vs. uniprot
Match: A0A7I8VW54_9ANNE (Hypothetical protein n=1 Tax=Dimorphilus gyrociliatus TaxID=2664684 RepID=A0A7I8VW54_9ANNE) HSP 1 Score: 61.6 bits (148), Expect = 1.950e-8 Identity = 38/110 (34.55%), Postives = 61/110 (55.45%), Query Frame = 1
Query: 13 AIQVDWDENGRLVPNEASREIGGRDLEEEQTFEEIEEDVDSRATSTSFISREATAPWSVAQTQAFYRGLQRYGTDFSMMEEAFAGRTRAQLKNKYKKELRLRAELVTKAL 342
A Q+ DE G +V +E S + + + ++ + + D +S SF + + PW+V T FY GL+ GTDF+ + + F GR+R +LK K+K+E R+ LV AL
Sbjct: 213 APQIRIDEKGEIVIDEESLVVREKKKFDFKSMPLTDGNKDEFVSSRSFKKQSFSGPWTVRDTATFYLGLKTLGTDFTSLTKLFPGRSREELKKKFKREERVNGNLVETAL 322
BLAST of mRNA_S-ischiensis_contig8.19708.1 vs. uniprot
Match: A0A7I4C3W2_PHYPA (SANT domain-containing protein n=4 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4C3W2_PHYPA) HSP 1 Score: 61.6 bits (148), Expect = 2.050e-8 Identity = 36/95 (37.89%), Postives = 55/95 (57.89%), Query Frame = 1
Query: 37 NGRLVPNEASREIGGR--DLEEEQTFEEIEEDVDSRATSTSFISREATAPWSVAQTQAFYRGLQRYGTDFSMMEEAFAGRTRAQLKNKYKKELRL 315
NGR+V N+ S + + E+ T+ +EED + S S+ +R W T FY+ LQ++GTDF +++ F GRTR Q+K+K+K E RL
Sbjct: 170 NGRIVINQQSLMVAAQASTREDIDTYRRVEEDR-PKLNSNSYSNRTHVERWKQEDTDLFYKALQQFGTDFELIQNLFPGRTRKQVKSKFKNEERL 263
BLAST of mRNA_S-ischiensis_contig8.19708.1 vs. uniprot
Match: Q23QE8_TETTS (Myb-like DNA-binding domain protein n=1 Tax=Tetrahymena thermophila (strain SB210) TaxID=312017 RepID=Q23QE8_TETTS) HSP 1 Score: 61.2 bits (147), Expect = 2.690e-8 Identity = 31/66 (46.97%), Postives = 43/66 (65.15%), Query Frame = 1
Query: 145 STSFISREATAPWSVAQTQAFYRGLQRYGTDFSMMEEAFAGRTRAQLKNKYKKELRLRAELVTKAL 342
S SF+SRE T WS +T FY+GL+ +GTDFSM+ F RTR KNK++KE ++ + + K L
Sbjct: 260 SASFLSREHTKKWSHDETLKFYKGLELFGTDFSMISRLFTNRTRKMCKNKFRKEEKVNMQEIEKRL 325
BLAST of mRNA_S-ischiensis_contig8.19708.1 vs. uniprot
Match: A0A835LCC2_SPOEX (Myb-like domain-containing protein n=1 Tax=Spodoptera exigua TaxID=7107 RepID=A0A835LCC2_SPOEX) HSP 1 Score: 61.2 bits (147), Expect = 3.050e-8 Identity = 34/61 (55.74%), Postives = 39/61 (63.93%), Query Frame = 1
Query: 172 TAPWSVAQTQAFYRGLQRYGTDFSMMEEAFAGRTRAQLKNKYKKELRLRAELVTKALRTPI 354
TA WS A+T FYR L GTDF +ME F GRTR LK K+KKE R+ V KALRT +
Sbjct: 486 TADWSDAETVRFYRALAAMGTDFMLMERLFPGRTRRDLKLKFKKEERMNMAQVDKALRTTV 546
BLAST of mRNA_S-ischiensis_contig8.19708.1 vs. uniprot
Match: A0A2H1V467_SPOFR (SFRICE_001433 n=6 Tax=Spodoptera TaxID=7106 RepID=A0A2H1V467_SPOFR) HSP 1 Score: 61.2 bits (147), Expect = 3.050e-8 Identity = 34/61 (55.74%), Postives = 39/61 (63.93%), Query Frame = 1
Query: 172 TAPWSVAQTQAFYRGLQRYGTDFSMMEEAFAGRTRAQLKNKYKKELRLRAELVTKALRTPI 354
TA WS A+T FYR L GTDF +ME F GRTR LK K+KKE R+ V KALRT +
Sbjct: 490 TADWSDAETVRFYRALAAMGTDFMLMERLFPGRTRRDLKLKFKKEERMNMAQVDKALRTTV 550
BLAST of mRNA_S-ischiensis_contig8.19708.1 vs. uniprot
Match: A0A7E5WN33_TRINI (uncharacterized protein LOC113504141 n=1 Tax=Trichoplusia ni TaxID=7111 RepID=A0A7E5WN33_TRINI) HSP 1 Score: 61.2 bits (147), Expect = 3.070e-8 Identity = 35/59 (59.32%), Postives = 38/59 (64.41%), Query Frame = 1
Query: 172 TAPWSVAQTQAFYRGLQRYGTDFSMMEEAFAGRTRAQLKNKYKKELRLRAELVTKALRT 348
TA WS A+T FYR L GTDF +ME F GRTR LK K+KKE RL V KALRT
Sbjct: 533 TADWSDAETVRFYRALAALGTDFMLMERLFPGRTRRDLKLKFKKEERLNMAQVDKALRT 591 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19708.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig8.19708.1 >prot_S-ischiensis_contig8.19708.1 ID=prot_S-ischiensis_contig8.19708.1|Name=mRNA_S-ischiensis_contig8.19708.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=137bp EIGGAIQVDWDENGRLVPNEASREIGGRDLEEEQTFEEIEEDVDSRATSTback to top mRNA from alignment at S-ischiensis_contig8:3272656..3276219+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig8.19708.1 ID=mRNA_S-ischiensis_contig8.19708.1|Name=mRNA_S-ischiensis_contig8.19708.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=3564bp|location=Sequence derived from alignment at S-ischiensis_contig8:3272656..3276219+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig8:3272656..3276219+ >mRNA_S-ischiensis_contig8.19708.1 ID=mRNA_S-ischiensis_contig8.19708.1|Name=mRNA_S-ischiensis_contig8.19708.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=822bp|location=Sequence derived from alignment at S-ischiensis_contig8:3272656..3276219+ (Schizocladia ischiensis KU_0333)back to top |