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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 1123 |
| Cds size | 1122 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817268.4031272-CDS-S-ischiensis_contig8:3182773..3183895 | 1622817268.4031272-CDS-S-ischiensis_contig8:3182773..3183895 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 3182774..3183895 + |
| 1695740982.0135794-CDS-S-ischiensis_contig8:3182773..3183895 | 1695740982.0135794-CDS-S-ischiensis_contig8:3182773..3183895 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 3182774..3183895 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig8.19680.1 >prot_S-ischiensis_contig8.19680.1 ID=prot_S-ischiensis_contig8.19680.1|Name=mRNA_S-ischiensis_contig8.19680.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=374bp
QGQVGGSRQRTRLRAEDALVLAAPAIQGLAALFLSGRPFVFADGAAMFRK
NAPSGKRGTVGPRQRPEGDQQRKDPSSGREADTIAIAASTSRGSSALGHK
NRSNSLGSLARPSHGGKATGPVAPQRAFPDGHRRSTSLVRALNIRRRKKP
RSDEPTGTAEASPVSPRADTGGGHPTTLRAATIAQVFSSPESPRSDNSGS
SSCSSSDDRDGRHGHGAVRRADTRRHWGGEGGGQSPPSPRTINALYSDHL
ISHPISVTSTTFSSMMSPDSVQLGDSWGGGRPHARTSSSGSWTMGHSMGG
GGGGGGKDSPAGPKRQPLGRALTYQSPVARLDYNSTNRARAATQRGRELG
LPPRGEGVAYVLEPEVESCSSEEG back to topmRNA from alignment at S-ischiensis_contig8:3182774..3183895+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig8.19680.1 ID=mRNA_S-ischiensis_contig8.19680.1|Name=mRNA_S-ischiensis_contig8.19680.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1122bp|location=Sequence derived from alignment at S-ischiensis_contig8:3182774..3183895+ (Schizocladia ischiensis KU_0333)
CAGGGACAAGTTGGCGGGAGTCGCCAGAGGACGCGCTTGCGGGCAGAGGA
TGCACTTGTGTTGGCAGCGCCGGCCATCCAGGGGCTAGCCGCCCTTTTTC
TGTCGGGGCGGCCGTTCGTTTTTGCGGACGGCGCCGCCATGTTTCGGAAA
AATGCGCCTAGTGGCAAACGCGGCACCGTCGGTCCCCGCCAAAGACCGGA
AGGAGACCAGCAGCGCAAGGACCCGTCATCTGGGCGCGAAGCAGACACCA
TTGCCATTGCGGCCTCGACTTCGCGGGGGAGTTCTGCCCTAGGGCACAAG
AACCGCTCGAACAGTCTGGGCTCACTTGCGCGCCCAAGCCATGGGGGGAA
GGCCACCGGGCCGGTTGCGCCCCAGCGGGCGTTCCCGGACGGCCACAGGC
GGTCGACCTCGCTGGTGAGGGCGCTTAACATCCGGAGACGGAAGAAGCCG
CGGTCGGATGAGCCAACGGGGACGGCGGAGGCCTCCCCTGTGTCCCCGCG
GGCGGACACAGGTGGAGGCCATCCGACCACCCTCAGGGCCGCGACGATCG
CCCAGGTCTTCAGCAGCCCCGAGAGCCCACGGTCAGACAACTCGGGCAGC
AGCAGCTGCAGCAGCAGCGACGATAGGGACGGGCGCCACGGGCACGGGGC
CGTGAGGCGGGCGGACACCCGGCGGCACTGGGGTGGGGAAGGGGGGGGGC
AGTCGCCCCCCTCGCCCCGCACCATCAACGCCCTCTACTCCGACCACCTC
ATCTCGCACCCCATCTCCGTCACCTCGACGACCTTCTCGTCCATGATGAG
CCCCGACTCGGTGCAGCTCGGCGACAGCTGGGGGGGGGGCAGGCCCCACG
CGAGGACGAGCTCGAGCGGGAGCTGGACGATGGGGCACTCCATGGGCGGC
GGCGGCGGCGGCGGCGGCAAAGATTCCCCCGCAGGGCCCAAGCGGCAGCC
TCTGGGGCGTGCATTAACGTACCAGTCGCCAGTGGCGCGGCTTGATTACA
ATTCGACCAACCGGGCCCGGGCGGCGACCCAGCGTGGCCGGGAGCTGGGC
CTGCCGCCCCGGGGGGAGGGCGTGGCCTATGTGCTGGAGCCGGAGGTGGA
GAGCTGCAGCAGCGAGGAAGGG back to topCoding sequence (CDS) from alignment at S-ischiensis_contig8:3182774..3183895+ >mRNA_S-ischiensis_contig8.19680.1 ID=mRNA_S-ischiensis_contig8.19680.1|Name=mRNA_S-ischiensis_contig8.19680.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2244bp|location=Sequence derived from alignment at S-ischiensis_contig8:3182774..3183895+ (Schizocladia ischiensis KU_0333)
CAGGGACAAGTTGGCGGGAGTCGCCAGAGGACGCGCTTGCGGGCAGAGGA
TGCACTTGTGTTGGCAGCGCCGGCCATCCAGGGGCTAGCCGCCCTTTTTC
TGTCGGGGCGGCCGTTCGTTTTTGCGGACGGCGCCGCCATGTTTCGGAAA
AATGCGCCTAGTGGCAAACGCGGCACCGTCGGTCCCCGCCAAAGACCGGA
AGGAGACCAGCAGCGCAAGGACCCGTCATCTGGGCGCGAAGCAGACACCA
TTGCCATTGCGGCCTCGACTTCGCGGGGGAGTTCTGCCCTAGGGCACAAG
AACCGCTCGAACAGTCTGGGCTCACTTGCGCGCCCAAGCCATGGGGGGAA
GGCCACCGGGCCGGTTGCGCCCCAGCGGGCGTTCCCGGACGGCCACAGGC
GGTCGACCTCGCTGGTGAGGGCGCTTAACATCCGGAGACGGAAGAAGCCG
CGGTCGGATGAGCCAACGGGGACGGCGGAGGCCTCCCCTGTGTCCCCGCG
GGCGGACACAGGTGGAGGCCATCCGACCACCCTCAGGGCCGCGACGATCG
CCCAGGTCTTCAGCAGCCCCGAGAGCCCACGGTCAGACAACTCGGGCAGC
AGCAGCTGCAGCAGCAGCGACGATAGGGACGGGCGCCACGGGCACGGGGC
CGTGAGGCGGGCGGACACCCGGCGGCACTGGGGTGGGGAAGGGGGGGGGC
AGTCGCCCCCCTCGCCCCGCACCATCAACGCCCTCTACTCCGACCACCTC
ATCTCGCACCCCATCTCCGTCACCTCGACGACCTTCTCGTCCATGATGAG
CCCCGACTCGGTGCAGCTCGGCGACAGCTGGGGGGGGGGCAGGCCCCACG
CGAGGACGAGCTCGAGCGGGAGCTGGACGATGGGGCACTCCATGGGCGGC
GGCGGCGGCGGCGGCGGCAAAGATTCCCCCGCAGGGCCCAAGCGGCAGCC
TCTGGGGCGTGCATTAACGTACCAGTCGCCAGTGGCGCGGCTTGATTACA
ATTCGACCAACCGGGCCCGGGCGGCGACCCAGCGTGGCCGGGAGCTGGGC
CTGCCGCCCCGGGGGGAGGGCGTGGCCTATGTGCTGGAGCCGGAGGTGGA
GAGCTGCAGCAGCGAGGAAGGGCAGGGACAAGTTGGCGGGAGTCGCCAGA
GGACGCGCTTGCGGGCAGAGGATGCACTTGTGTTGGCAGCGCCGGCCATC
CAGGGGCTAGCCGCCCTTTTTCTGTCGGGGCGGCCGTTCGTTTTTGCGGA
CGGCGCCGCCATGTTTCGGAAAAATGCGCCTAGTGGCAAACGCGGCACCG
TCGGTCCCCGCCAAAGACCGGAAGGAGACCAGCAGCGCAAGGACCCGTCA
TCTGGGCGCGAAGCAGACACCATTGCCATTGCGGCCTCGACTTCGCGGGG
GAGTTCTGCCCTAGGGCACAAGAACCGCTCGAACAGTCTGGGCTCACTTG
CGCGCCCAAGCCATGGGGGGAAGGCCACCGGGCCGGTTGCGCCCCAGCGG
GCGTTCCCGGACGGCCACAGGCGGTCGACCTCGCTGGTGAGGGCGCTTAA
CATCCGGAGACGGAAGAAGCCGCGGTCGGATGAGCCAACGGGGACGGCGG
AGGCCTCCCCTGTGTCCCCGCGGGCGGACACAGGTGGAGGCCATCCGACC
ACCCTCAGGGCCGCGACGATCGCCCAGGTCTTCAGCAGCCCCGAGAGCCC
ACGGTCAGACAACTCGGGCAGCAGCAGCTGCAGCAGCAGCGACGATAGGG
ACGGGCGCCACGGGCACGGGGCCGTGAGGCGGGCGGACACCCGGCGGCAC
TGGGGTGGGGAAGGGGGGGGGCAGTCGCCCCCCTCGCCCCGCACCATCAA
CGCCCTCTACTCCGACCACCTCATCTCGCACCCCATCTCCGTCACCTCGA
CGACCTTCTCGTCCATGATGAGCCCCGACTCGGTGCAGCTCGGCGACAGC
TGGGGGGGGGGCAGGCCCCACGCGAGGACGAGCTCGAGCGGGAGCTGGAC
GATGGGGCACTCCATGGGCGGCGGCGGCGGCGGCGGCGGCAAAGATTCCC
CCGCAGGGCCCAAGCGGCAGCCTCTGGGGCGTGCATTAACGTACCAGTCG
CCAGTGGCGCGGCTTGATTACAATTCGACCAACCGGGCCCGGGCGGCGAC
CCAGCGTGGCCGGGAGCTGGGCCTGCCGCCCCGGGGGGAGGGCGTGGCCT
ATGTGCTGGAGCCGGAGGTGGAGAGCTGCAGCAGCGAGGAAGGG back to top
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