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Homology
BLAST of mRNA_S-ischiensis_contig8.19636.1 vs. uniprot
Match: D7FL71_ECTSI (TPT domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FL71_ECTSI) HSP 1 Score: 124 bits (312), Expect = 6.350e-29 Identity = 88/191 (46.07%), Postives = 108/191 (56.54%), Query Frame = 2
Query: 17 GLGLAAVSTAAIGARHVYAKRAYQLEDFRARPLSAANSYAVLTVMSFATAVPYACVVDGPTAAEGWARASRAV--GARE----------ASTLGG--------------YLLCSGVLFFLHNAAGFAVHKRVGPVP-FSLLNALKRGAVVTAGVAFAGRPIDARHGAGLALAVLGAAALSASKAFFPPRRR 508
GL A S+ +G R Y+KRA + +F RPLSAAN+YAV+TVMSFAT VPYA +VDGP A WA A V GAR A GG YL SGVL FLH+AA F V +++G V FS+ N++KRG V+ G G PI G G A+AVLG AA ++ +FPPRRR
Sbjct: 207 GLFFAVASSVCVGVRDFYSKRASRQREFHKRPLSAANTYAVVTVMSFATVVPYALIVDGPHALRWWATAGGGVAGGARAVASAVREGVGAGDAGGDDDDVATSLAWLALYLGFSGVLLFLHSAAAFKVLEKMGSVTTFSVANSVKRGMVIFFGAVAMGTPIGFVSGFGAAVAVLGTAAYWVARLYFPPRRR 397
BLAST of mRNA_S-ischiensis_contig8.19636.1 vs. uniprot
Match: A0A1X1BMD4_9APIC (Glucose-6-phosphate/phosphate translocator n=1 Tax=Babesia sp. Xinjiang TaxID=462227 RepID=A0A1X1BMD4_9APIC) HSP 1 Score: 55.8 bits (133), Expect = 3.920e-5 Identity = 34/124 (27.42%), Postives = 64/124 (51.61%), Query Frame = 2
Query: 113 LSAANSYAVLTVMSFATAVPYACVVDGPTAAEGWARASRAVGAREASTLGGYLLCSGVLFFLHNAAGFAVHKRVGPVPFSLLNALKRGAVVTAGVAFAGRPIDARHGAGLALAVLGAAALSASK 484
LS N Y + T+++ +P A +++ PT AE W A++++ E + + +L GV ++ +N F R+ V +S+LN +KR AV+ + ++ G+A+A+ G S +K
Sbjct: 211 LSPTNVYMLFTLVASVICLPIALIIEAPTWAEAWETATKSMTGNEKTYIILKILACGVFYYTYNDFSFYCLGRMNQVTYSVLNTMKRIAVIVVSIIIFRNTVEVLGYVGIAIAIAGGLLYSLAK 334
BLAST of mRNA_S-ischiensis_contig8.19636.1 vs. uniprot
Match: A0A2H6KHL3_9APIC (Apicoplast triosephosphate translocator APT1 n=1 Tax=Babesia ovata TaxID=189622 RepID=A0A2H6KHL3_9APIC) HSP 1 Score: 55.8 bits (133), Expect = 4.220e-5 Identity = 35/133 (26.32%), Postives = 70/133 (52.63%), Query Frame = 2
Query: 113 LSAANSYAVLTVMSFATAVPYACVVDGPTAAEGWARASRAVGAREASTLGGYLLCSGVLFFLHNAAGFAVHKRVGPVPFSLLNALKRGAVVTAGVAFAGRPIDARHGAGLALAVLGAAALSASKAFFPPRRRK 511
L+ N+Y + T+++ +VP A +++ PT E WA+A+ ++ E + + G + GV ++++N F + V +S+LN +KR AV+ + ++ G+A A++G S +K RR++
Sbjct: 234 LTPTNTYMLFTLVAGICSVPPALIIEAPTWVEVWAKATASMTKGEKAIVIGKFIACGVFYYVYNDCSFYCLGLMNQVTYSVLNTMKRIAVIVVSIIIFKNTVEVLGYVGMATAIVGGLLYSLAKQGVCTRRKE 366
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Model size | 991 |
| Cds size | 528 |
| Stop | 1 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622817261.677943-CDS-S-ischiensis_contig8:2705360..2705413 | 1622817261.677943-CDS-S-ischiensis_contig8:2705360..2705413 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 2705361..2705413 + |
| 1695740977.9550788-CDS-S-ischiensis_contig8:2705360..2705413 | 1695740977.9550788-CDS-S-ischiensis_contig8:2705360..2705413 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 2705361..2705413 + |
| 1622817261.6901212-CDS-S-ischiensis_contig8:2706169..2706261 | 1622817261.6901212-CDS-S-ischiensis_contig8:2706169..2706261 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 2706170..2706261 + |
| 1695740977.9782758-CDS-S-ischiensis_contig8:2706169..2706261 | 1695740977.9782758-CDS-S-ischiensis_contig8:2706169..2706261 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 2706170..2706261 + |
| 1622817261.7022295-CDS-S-ischiensis_contig8:2706723..2706885 | 1622817261.7022295-CDS-S-ischiensis_contig8:2706723..2706885 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 2706724..2706885 + |
| 1695740977.9917076-CDS-S-ischiensis_contig8:2706723..2706885 | 1695740977.9917076-CDS-S-ischiensis_contig8:2706723..2706885 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 2706724..2706885 + |
| 1622817261.7154655-CDS-S-ischiensis_contig8:2710306..2710527 | 1622817261.7154655-CDS-S-ischiensis_contig8:2710306..2710527 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 2710307..2710527 + |
| 1695740978.0059597-CDS-S-ischiensis_contig8:2710306..2710527 | 1695740978.0059597-CDS-S-ischiensis_contig8:2710306..2710527 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 2710307..2710527 + |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622817261.7263277-UTR-S-ischiensis_contig8:2710527..2710989 | 1622817261.7263277-UTR-S-ischiensis_contig8:2710527..2710989 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig8 2710528..2710989 + |
| 1695740978.018788-UTR-S-ischiensis_contig8:2710527..2710989 | 1695740978.018788-UTR-S-ischiensis_contig8:2710527..2710989 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig8 2710528..2710989 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig8.19636.1 >prot_S-ischiensis_contig8.19636.1 ID=prot_S-ischiensis_contig8.19636.1|Name=mRNA_S-ischiensis_contig8.19636.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=176bp
RPGLGWAGPGGRFYRGHRREARVCEEGIPAGGFPGPASLGRQLLRGAHGY VFRDGCAVRVCGGRPDGGRGVGAGVAGGWGKGGQHAGGLPPVQRGALLPT QRRGLCRAQARGARAFLPAERPQAGGGGDGGCGLCGPPHRRPARGGPGAG RPGGGGAVRLQGLLPPPPKKALSVK* back to topmRNA from alignment at S-ischiensis_contig8:2705361..2710989+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig8.19636.1 ID=mRNA_S-ischiensis_contig8.19636.1|Name=mRNA_S-ischiensis_contig8.19636.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=5629bp|location=Sequence derived from alignment at S-ischiensis_contig8:2705361..2710989+ (Schizocladia ischiensis KU_0333) AGACCTGGGCTGGGCTGGGCTGGGCCTGGCGGCCGTTTCTACCGCGGCCA
TCGGTGAGAACCCCCCGGGGGGGGCCGGGGGGGTGTGTGGAGTTCTTGCC
CGAGCAGACAGGATTATTTTTATGCGCCGATCGTGACAGCATGTCTGCCC
CTCCCCcccctCCCCCCGCTTGGCGGGCCTCCGCCAGGCCCTGCACTGTG
AAGGCGTGTGCTTCGAAGCACCAATTACTTGCCTCGTGCTTTACGGTACT
GTAGTGGTACAGTAGTGCTGCCACGTACGAAGAACACTTGCGCCGTGTAT
GGGTCGAGGCACGTGGTCGGCGGTCTCAGAGCTAACTTACTCGAGCTCGG
AAAGTGGTACTTGAGATTGCATCAGGCTCAATGCGAACACACACACACAC
ACACATGCACGCACACACGCACACATATACTCCGACCTACTGTATGTAGA
TGTGTACTGCAGAGTACTGTAGGTTCCGGTATGAACCCATGCCTGGCCAA
GGTGGTGAGAACCCGGTGTTCTCCGTCCCGGCCTGGTTGGGACGCGAGGC
CAATGGCCAAAAGGCTGCCCTGCGGGGGCTGGCTGGCAGTCCAGCAAGTA
GTACGCTGGGCCGACGGTCGGTGGTATGCACAGGACCGGGCAATAGCAAC
CCTGTCCGGCGTGAGTACACACACTGTGATGTGATGTGATATGGTGTGAT
GTGGTGTGATGTGATGTGATTTCCACTATAGTCTACTGTGCTGTAGTTTG
ACATCACATCACATCACATCATACTGACGACAGGAGTACACACACACTGT
GCCTGGCAGGCGCGAGGCACGTGTATGCGAAGAGGGCATACCAGCTGGAG
GATTTCCGGGCCCGGCCTCTCTCGGCCGCCAACTCCTACGCGGTGCTCAC
GGTGAGTGCACGCCTGACATTGGCAGATACAAGGACTTTGTACTACAATA
GGGTACTCTTGTGTACCCAGTGCCCGACCATATATCTCTCTCTGTCTCTG
TCTTTCCTCCTTCCTGTCCCTCTCCGTTTCTCTCTCTTGTCCCCCCCCCT
TCCTCTCCTCTCTTTCTCTCCATCTCTTTCTCTCTCTATCTCTATCTCTC
GCTATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCGAGAGTTGACATG
GCGAGCACTTGTCTGGGTTTTGCCAGCAGTCAAATAATCGTTGCGCGGCC
GAGTTCTGCCACCACGGTCAAGAGCTTGGTAAATAGTCGAGGGAGGCTGA
TGATGAGCTGCGCCACGGCCGTGCCATGATGATATCTTCCTTCGCCCCCT
CGTGCAAAACCAGGTTATGTCTTTCGCGACGGCTGTGCCGTACGCGTGTG
TGGTGGACGGCCCGACGGCGGCCGAGGGGTGGGCGCGGGCGTCGCGGGCG
GTTGGGGCAAGGGAGGCCAGCACGCTGGGGGGCTACCTCCTGTGCAGCGG
GGTGCTCTTCTTCCTACACAACGCCGTGAGTGAGGGGTGATTCATATAAA
ATGTAGCGAGGTGCAATCGCGCGTGTTTGAGGAACTTGCGCGAGGTCATG
TCCCCGTGGTTGCGGATTATCTTGCTGCGGCGGTGATTCATATAGAGCTA
AATTGTAATGAGGTACAATCGCACGTGTGTGAGATTGAGTGTTCTCGTAG
TGAGTGAGGGACGGGCGGACGGAGGCGTTGTTGGGCGCTTTGTCATCGAG
GGAGTCGTGCAGTGCAGTACGGTACATTCTTGTGGGTTTGCACGAGGTCG
GAGGCGTGTTTGTTGCGTGGCACTGTGAGGACGACGGGGCGCTCGTGTGG
TGTGATGTGATGTGATACATACATATATCTGCTATAGAGTATATTGGATA
TGTGTGTGCACAGTGGCTTGTCTTGCGACAGAATTCTTGCGTGCTTTGCC
GATGATAGCACGAAGTAAAAAGCACTTGGGGTTCGCTGTCCGACGGGAGT
AGACTAGGTATGTATGTGATGTAATGTGATATGTACTTCCCCTATTGCAC
TTGCTGCCGTTTGACACGGCATCGCGTTGCGTCCATCACACGGTAGTTGT
TCGGTTGTACTCGTACGAGTGTGCTTGTAAGGGTGTCAGTTAGGTAGTCC
GTAGAGGATACCGGGCCGCTACTTACCGTGATGTGATGCGATGTGATGTG
ATGCTTCGAAGCTTGTGCTCTCATGTACCATCGTTTGACGTCGCTCACGC
CGTGTCGCATCGCGTCCCATCACATCACATCGCGTTGCGTCGGCACCACC
ACATCAGTAGCTTGCACGTGTACGAGTAATATCCTTGGAAGGGTATGGCA
AATGGTCGTCTGGCTTCGGCAAGCAACTCAGTGCAAGTGCCGCCCCCCCC
CCCAAAGGCCAATGGGTTCTCCCCCTGTGGGACGCATGATCCAACGCCAC
AACAAGTACGGCTGGCTGTTTGTTCATGGCAAGAAAGACCTCACAAGACG
AGCAACCAACCCCCCCGAGAAACGTAATGCACACACAATAGTACCTAAGA
AGCCCCCGCCTGCCCCCCTCCCTGTCAAGCACTAAGGCGTTGTGGACCAC
GGCACCGCCCATCAGCGCATCATGCGCCTCCCAGCAGGGGTGGGGTTTTC
AGGAGAGTGAACTATCTTTACGGCTGCATGCACCTTGGACGGCGTGTGCC
TTTTCTAGAAGCTTGGACCGCGGCTACAAAACGCCCCCGCATATCTACTA
AACCTTGCAGTAGCTGCTCCGACGTACTCGAGTCTATCCCAAACGAACAG
TACCATGCAATGCACTGCAACACAAGGTGCTCCCCTCCTCTGAGCCTACA
ATCGACCTACCGTAATGTCGAGTCGCACTGTCATGAAGCTTGACATGCCC
CCTCGACGAGATATCTACTGTAGTCGATTCTGCTACATATCCCTGGCGCA
ACACACCCCAATGTCACGAGTAAGCGCCCCCTCGGCCGCGGCACATTCAG
AGGGTAAAACTAGTCCGCGGCGACCCCCGCACTCGCGGCGCCTGCCTGAT
CTTGCAGCCATCCCAAGTCTCATCCTGCTCCTCCTCCTCCTCGTGCGCGT
ACGCAAAAGGCCTGCCCTGTTCCTGGCTGAAGTTGGATACCTCAACGCGC
GCCGGCGACGGACACTCGCTCGCGAACTGACCCACACCACCACACCTACC
GGCGGCCGCAGCAATGCGCCACTCACTGCCAGACTGCTCCGACTTAGTGT
CCTGCTGCTTAGCCTGTTGCGTTGCCTTCTGCTTACGAGGGGTCTGCTTC
CTGGGGTTAGGGCACTGGTTGCTCCTATGGCCCACCTCACCACAGTTCTA
GCACTTGCCACGAATACGCGCGGCGTGCACCTGAGCCTGCAAGACCGTCT
CGCCCGGGAACATCCCCACCTTGCTCTTACCCCTGTCCTCCCCTGCATCA
GCCCTACGGCGGTAATGCGCCCTGATGGAGTCCACAAACTCCGGATACTT
GAGGTCTGCCTTGTTCTCCAAGACTACCCTTAGACTGTCGTACCTCGAAG
ACAAGGCTACAAGAAGAATGCAGCACTTCAATTTCTCCGAGATCTCGACC
TCTAGCTCACCTAGCTGCCTGCAGAGGGTGTCTATCTCTAGCATGATTTC
CTCCGGATCCCACGAGTCTTCCTCCGTCTTGATCTGCAGTAGACGCTTGT
ACAGACCCAGCACGCGCGTGGCACTCGTGGACTCAAACTATCTAGGACAA
TTTTCCACGCCTTAGCACCGTCCCGCTCGCCCCCAGCTACCACAAGCCTT
ACACTGCTCGGATCCAACGACATGACCAGGTAGTTGTAGACTTGTTGGAG
CTTCCTCTTGTGCTCCGCGGCCGCCTCCCGGGTCGCTGCCTCCGGCTCCA
TTCCAATCATGACCTCGTAGAGGCCCTTGAGCTGCATCCAGGCCTCGAAC
CTCGCCCGCCACACGCCAAATCTCCCCTCCTTGCCGTCAAGCGGGACAGA
CTTGACCGACTTGTCATCCCCACACCGGCTCCTCAGCCCACAGATCCCCG
TCTTGAGCCCAAGCCCGGCCTTCTTTAGGTTGGGCTGCGCACCTTACGCC
CAGGACACGTCGCCGCGCCCTCCCTCTGCCGGTCGACGAGCCGGACTTCA
ACTGATACAACAGTACCGTTGCCGCGAGCCAAACAGGCTCCCTCGTGCCA
GTCGGCGAGCTGGACTTCACCCGATACAGCGTGTACCGACGCCGTGACCC
GCACTCCATAGATCGGCTTCTCCGTTTCGGGCCGCGCCCAGGACACCTCG
CAGTGCCCTCCCCGTAATTTTAGGCCCATGCCAAGGACACGTCGCTGCGC
CCTCCCTTGGTTTCGGACTACGCCCAGGGCTGTACCCTCCCTATTTAGGC
CTTGCCAAGGACACGTCACCGTGAGGCCGTGCCCTCCCCCGGATGCCCCG
AAGGCTCTCGGTCACCGTAGACCGTGGGTTGCTTAGTGACCGCCCACGCC
GGAACTTGCTCACGGCCGTTCTCCCACCGGACTACTCCTACCACTGCACC
ACAGGGCTCATAACCTGTCAAGCACTAGGGCGCCGTGCACCACGGCACCG
CCCATCAGCGCTTCATGCGCCTCCCAGCAGGGGTGGGGTTTTCAGGAGAG
TGAATTATCTTTACGGCTGCATGCACCTTGGACGGCGTGTGCCTTTTCTA
GAAGCTTGGACCGTGGCTACAAAACGCCCCCGCATATCTACCGAACCTCG
CAGTAACTGCTCCGACGTACTCGAGTCTACCCCAAACGAACAGTACCATG
CAATGCACTGCAACACAACGTGCTCCCCTCCTCTGAGCCTACAATCGACA
TACTGTAATGTCGAGTCGCACTGTCACAAAGCTTGACACTCCCCTCCTCT
CCCCCTCAACTCGCATACACCGAAAATCGAATGGCTGTTTCTCCAGGCGG
GCTTTGCCGTGCACAAGCGCGTGGGGCCCGTGCCTTTCTCCCTGCTGAAC
GCCCTCAAGCGGGGGGCGGTGGTGACGGCGGGTGTGGCCTTTGCGGGCCG
CCCCATCGACGCCCGGCACGGGGCGGGCCTGGCGCTGGCCGTCCTGGGGG
CGGCGGCGCTGTCCGCCTCCAAGGCCTTCTTCCCCCCCCGCCGAAGAAAG
CTCTCTCAGTGAAGTGAAGTTCGGTTCGAGATAGATCTCGACTCTTTGGG
CTCGGATCAGAGTTTGAAAAGGTTGAAGCTCGGACCTCGAGTTCAGGCCA
GATCTCGACGACTCTTCGGGCCCGGATCGGAGTTTGAAAAGGAAGCTCTC
TCGGTGAGGTTCGTTGGGTTCGAGATAGATCTCGACTCTTCTTTGGGCTC
GGATCAGAGTTTGAACAGGTTGAAGCTCTCTCAGTGAAGTTCGGTTCGAG
ATAGATCTCGACGACTCTTTGGGCTCGGATCAGAGTTTGAAAAGGTTGAA
GCTCTCTCAGTGAAGTTCGGTTTGAGATCTCGGCGACTGTTTGGGCTCGG
ATCGGAGCTTGAAAAGGTTGAAGCTCGGGCGGACCTCGAGTTCAGGTTGG
AGTGGTGGCGCTGTGTGTTGCTTTTCCGAGTTGTTGTCGCCACAGGTTTT
TACCACCGCCCCCTGCTTCCCGTCCTCCA back to topCoding sequence (CDS) from alignment at S-ischiensis_contig8:2705361..2710989+ >mRNA_S-ischiensis_contig8.19636.1 ID=mRNA_S-ischiensis_contig8.19636.1|Name=mRNA_S-ischiensis_contig8.19636.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1056bp|location=Sequence derived from alignment at S-ischiensis_contig8:2705361..2710989+ (Schizocladia ischiensis KU_0333) AGACCTGGGCTGGGCTGGGCTGGGCCTGGCGGCCGTTTCTACCGCGGCCA TCGAGACCTGGGCTGGGCTGGGCTGGGCCTGGCGGCCGTTTCTACCGCGG CCATCGGCGCGAGGCACGTGTATGCGAAGAGGGCATACCAGCTGGAGGAT TTCCGGGCCCGGCCTCTCTCGGCCGCCAACTCCTACGCGGTGCTCACGGC GCGAGGCACGTGTATGCGAAGAGGGCATACCAGCTGGAGGATTTCCGGGC CCGGCCTCTCTCGGCCGCCAACTCCTACGCGGTGCTCACGGTTATGTCTT TCGCGACGGCTGTGCCGTACGCGTGTGTGGTGGACGGCCCGACGGCGGCC GAGGGGTGGGCGCGGGCGTCGCGGGCGGTTGGGGCAAGGGAGGCCAGCAC GCTGGGGGGCTACCTCCTGTGCAGCGGGGTGCTCTTCTTCCTACACAACG CCGTTATGTCTTTCGCGACGGCTGTGCCGTACGCGTGTGTGGTGGACGGC CCGACGGCGGCCGAGGGGTGGGCGCGGGCGTCGCGGGCGGTTGGGGCAAG GGAGGCCAGCACGCTGGGGGGCTACCTCCTGTGCAGCGGGGTGCTCTTCT TCCTACACAACGCCGCGGGCTTTGCCGTGCACAAGCGCGTGGGGCCCGTG CCTTTCTCCCTGCTGAACGCCCTCAAGCGGGGGGCGGTGGTGACGGCGGG TGTGGCCTTTGCGGGCCGCCCCATCGACGCCCGGCACGGGGCGGGCCTGG CGCTGGCCGTCCTGGGGGCGGCGGCGCTGTCCGCCTCCAAGGCCTTCTTC CCCCCCCGCCGAAGAAAGCTCTCTCAGTGAAGTGAGCGGGCTTTGCCGTG CACAAGCGCGTGGGGCCCGTGCCTTTCTCCCTGCTGAACGCCCTCAAGCG GGGGGCGGTGGTGACGGCGGGTGTGGCCTTTGCGGGCCGCCCCATCGACG CCCGGCACGGGGCGGGCCTGGCGCTGGCCGTCCTGGGGGCGGCGGCGCTG TCCGCCTCCAAGGCCTTCTTCCCCCCCCGCCGAAGAAAGCTCTCTCAGTG AAGTGA back to top
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