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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 532 |
| Cds size | 528 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817261.6223495-CDS-S-ischiensis_contig8:2678898..2679020 | 1622817261.6223495-CDS-S-ischiensis_contig8:2678898..2679020 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 2678899..2679020 - |
| 1695740977.9112127-CDS-S-ischiensis_contig8:2678898..2679020 | 1695740977.9112127-CDS-S-ischiensis_contig8:2678898..2679020 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 2678899..2679020 - |
| 1622817261.6349094-CDS-S-ischiensis_contig8:2680168..2680375 | 1622817261.6349094-CDS-S-ischiensis_contig8:2680168..2680375 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 2680169..2680375 - |
| 1695740977.929683-CDS-S-ischiensis_contig8:2680168..2680375 | 1695740977.929683-CDS-S-ischiensis_contig8:2680168..2680375 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 2680169..2680375 - |
| 1622817261.6459594-CDS-S-ischiensis_contig8:2680478..2680677 | 1622817261.6459594-CDS-S-ischiensis_contig8:2680478..2680677 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 2680479..2680677 - |
| 1695740977.9412386-CDS-S-ischiensis_contig8:2680478..2680677 | 1695740977.9412386-CDS-S-ischiensis_contig8:2680478..2680677 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 2680479..2680677 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig8.19632.1 >prot_S-ischiensis_contig8.19632.1 ID=prot_S-ischiensis_contig8.19632.1|Name=mRNA_S-ischiensis_contig8.19632.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=176bp
KQFWRESNLLDPGLCTSETKPSESSAMVATEDAGRGADVHDAASVADALS
KSGLPEAEQARLKALFARLESAERAGASGPVEGAGADSDADLAQRAGALF
ARLATSEKEVRRRAAAEDGLTPDEQEAYSRLEALFDRLSAAEGACAVKQV
EALGTEGVAPATTTPAGGPPGTNMEE back to topmRNA from alignment at S-ischiensis_contig8:2678897..2680677- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig8.19632.1 ID=mRNA_S-ischiensis_contig8.19632.1|Name=mRNA_S-ischiensis_contig8.19632.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1781bp|location=Sequence derived from alignment at S-ischiensis_contig8:2678897..2680677- (Schizocladia ischiensis KU_0333)
AAACAATTCTGGAGGGAGAGCAACTTGCTCGACCCCGGGCTGTGCACCAG
CGAGACCAAGCCGTCGGAAAGCAGTGCAATGGTGGCCACGGAAGATGCTG
GGCGGGGCGCGGATGTGCACGACGCAGCGTCAGTCGCCGACGCGCTATCC
AAGTCTGGCTTGCCCGAGGCCGAGCAGGCCAGGTTGAAGGCTCTCTTTGG
TGAGCTCATCCAACCGATCGTTTGCGTTCAGCGCCCCTCCCCCCTGCCTC
GTACGTCATGATGGCAAACTAAACCGGCCATGAACCCTCCATCGTTCTGC
AGCGCGTCTGGAAAGTGCCGAGCGCGCTGGAGCTTCGGGACCCGTAGAGG
GAGCTGGCGCCGACAGCGATGCAGACTTGGCACAACGCGCCGGCGCACTC
TTCGCGAGGCTGGCCACCTCCGAGAAGGAGGTTCGGAGGAGGGCCGCGGC
GGAAGATGGGCTGACCCCTGACGAGCAAGAGGCGTACAGCCGCCTAGAGG
CTCTATTCGGTGCGTACTGTACACAACATTTGTTGATGTTCGGTTCTGTG
GCGGCGCTTGTACAGAGCTTGGGAGTGTCACCTCCCAGAGGCCCACCCCC
ACCCGCTGGCACCTAGGTTGAGGATAGAGCAGCGGTGGTATGAGTGTCCC
CGGCGTGGTAGAAATGGACAAATTCAGAATCATTGTTTGAGGTTGAAGTA
TGAGAGGGCGGGGGATAAGGGGCCCCTCGGTACATTTTTTGGCCGCAAAA
CCGTTAAAATGGGGGTCGTTATTGAAGGGGGGTTCCTTTTCCTCCGTCCA
CCCGCCGATAGTGAACTGTCCGACCCGTAGGGGAGCGATATACGGGGGTG
TCGTTATAGGTACTGACAAGATGTCATCGAGGGGGGCTTTGATACTTTTT
AAGGGGGCCGACAAGTATTTCCGAGCTTTAAATGGTGGCTGGCCAGCTGC
ATGTTTCGATGGGTGCAGCCCCCAAGCCGCACATGCATCACAACACGATG
GGCGGCACGGTGGATGGTACGGGTGCATGACAGAACATGCTGCCCGTTTC
GGAGGCGTGTTTCGATGTACAGTAGATGGCGGCTTGGTTGAAGCTGGTGG
TTCAGTACGGCCACCCCGGGAGGCCCAGGAGGCCCAGGGCATTGGAGGGC
AAGGGGTTTCCGTGTCTCGGTTCCCCCCTGTGATTAAATGTTTGTGATGT
GGAAAAGTTATCGAAGGGTCGCTGTTCAAGGGGGGGTTCCTTATTCGAAT
GGCGTTCTGTTATCCACCGCCATTTACGGTACGAGGGCAAATGTATAGTA
AGAGTACATACTATACGTATCCCCGCACTTGTTTATGCCCTGCCCGATTT
GGTGAGCTTCGGTTCCGACACACAGCTCAACCATTCTCGCACACAACACA
CGTGCCCCACTTCTCTTCCCATCTCTCCCTCTACCCCTTCCTCCTCCCTG
AGCCCCCCCCCCCACGAACAAACGCCTCCCTGCCAAGTACTCCCTCCTCT
GGCGCGATATTTTTGCAAACACCTGCACATCCCTGCCCCCCGCCGCCCCT
CCGTGTTCCCCTCCCCCCGTGCGGCACTGCATCATCACCCCGCCACCTTC
CCCTGGGGCGGAAAAACCACGCCGCACGCACGCCTTCCCGGCGGTATGGC
CACGCAGACCGCCTGTCGGCCGCGGAGGGGGCCTGCGCCGTGAAGCAAGT
GGAAGCCCTGGGGACGGAAGGCGTTGCGCCTGCGACCACCACCCCTGCCG
GCGGGCCTCCAGGGACGAACATGGAAGAGGG back to topCoding sequence (CDS) from alignment at S-ischiensis_contig8:2678897..2680677- >mRNA_S-ischiensis_contig8.19632.1 ID=mRNA_S-ischiensis_contig8.19632.1|Name=mRNA_S-ischiensis_contig8.19632.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1056bp|location=Sequence derived from alignment at S-ischiensis_contig8:2678897..2680677- (Schizocladia ischiensis KU_0333)
AAACAATTCTGGAGGGAGAGCAACTTGCTCGACCCCGGGCTGTGCACCAG
CGAGACCAAGCCGTCGGAAAGCAGTGCAATGGTGGCCACGGAAGATGCTG
GGCGGGGCGCGGATGTGCACGACGCAGCGTCAGTCGCCGACGCGCTATCC
AAGTCTGGCTTGCCCGAGGCCGAGCAGGCCAGGTTGAAGGCTCTCTTTGA
AACAATTCTGGAGGGAGAGCAACTTGCTCGACCCCGGGCTGTGCACCAGC
GAGACCAAGCCGTCGGAAAGCAGTGCAATGGTGGCCACGGAAGATGCTGG
GCGGGGCGCGGATGTGCACGACGCAGCGTCAGTCGCCGACGCGCTATCCA
AGTCTGGCTTGCCCGAGGCCGAGCAGGCCAGGTTGAAGGCTCTCTTTGCG
CGTCTGGAAAGTGCCGAGCGCGCTGGAGCTTCGGGACCCGTAGAGGGAGC
TGGCGCCGACAGCGATGCAGACTTGGCACAACGCGCCGGCGCACTCTTCG
CGAGGCTGGCCACCTCCGAGAAGGAGGTTCGGAGGAGGGCCGCGGCGGAA
GATGGGCTGACCCCTGACGAGCAAGAGGCGTACAGCCGCCTAGAGGCTCT
ATTCGCGCGTCTGGAAAGTGCCGAGCGCGCTGGAGCTTCGGGACCCGTAG
AGGGAGCTGGCGCCGACAGCGATGCAGACTTGGCACAACGCGCCGGCGCA
CTCTTCGCGAGGCTGGCCACCTCCGAGAAGGAGGTTCGGAGGAGGGCCGC
GGCGGAAGATGGGCTGACCCCTGACGAGCAAGAGGCGTACAGCCGCCTAG
AGGCTCTATTCGACCGCCTGTCGGCCGCGGAGGGGGCCTGCGCCGTGAAG
CAAGTGGAAGCCCTGGGGACGGAAGGCGTTGCGCCTGCGACCACCACCCC
TGCCGGCGGGCCTCCAGGGACGAACATGGAAGAGACCGCCTGTCGGCCGC
GGAGGGGGCCTGCGCCGTGAAGCAAGTGGAAGCCCTGGGGACGGAAGGCG
TTGCGCCTGCGACCACCACCCCTGCCGGCGGGCCTCCAGGGACGAACATG
GAAGAG back to top
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