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Homology
BLAST of mRNA_S-ischiensis_contig8.19630.1 vs. uniprot
Match: A0A7S2B0Q0_9STRA (Repressor of RNA polymerase III transcription n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B0Q0_9STRA) HSP 1 Score: 241 bits (616), Expect = 2.700e-75 Identity = 118/194 (60.82%), Postives = 152/194 (78.35%), Query Frame = 1
Query: 301 MKFLEEPSLAALTAYLQNRELGDRVLNGRIEAFSCKRAGDDKRLGRALEQHMLS-LSKSPTGVGTPPNFGLLSDSFVRRLLIDLIFTMNASFPDYDFSGVTPDHFLKEPSVNLVMNKVNTQLTDIGEVYKVSFLEDLWSSVDDVVALRDCEVYSYSPE-EGDPFSDGCLWSFNYFFFNRDVKKILFLHCTAKSK 876
MKFLE+P L LT++L NRE+GDR+LNGRIEAFSCKRAG+DKRL + LEQ + L+ SPT +G+ P G LSDS RRLLIDLI TMNASFPD+DFS V P+ FLKE V+LVM+ +N L ++ E Y SFLE+LW S+++VV L++CE+YSY P+ E DPFS+G LW+FN+FFFN+++K+IL+ C A SK
Sbjct: 1 MKFLEQPQLEMLTSFLSNREIGDRILNGRIEAFSCKRAGEDKRLSKMLEQQYVDELACSPTALGSSP-LGPLSDSGTRRLLIDLISTMNASFPDHDFSSVRPEQFLKEQHVSLVMSNINMHLAELSETYNSSFLEELWMSIEEVVKLKECEIYSYVPDMEEDPFSEGNLWTFNFFFFNKNLKRILYFTCIATSK 193
BLAST of mRNA_S-ischiensis_contig8.19630.1 vs. uniprot
Match: D7FXY4_ECTSI (Repressor of RNA polymerase III transcription n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXY4_ECTSI) HSP 1 Score: 238 bits (606), Expect = 4.000e-73 Identity = 137/289 (47.40%), Postives = 181/289 (62.63%), Query Frame = 1
Query: 301 MKFLEEPSLAALTAYLQNRELGDRVLNGRIEAFSCKRAGDDKRLGRALEQHMLSLSKSPT---------------------------------------GVGTPPNFGLLSDSFVRRLLIDLIFTMNASFPDYDFSGVTPDHFLKEPSVNLVMNKVNTQLTDIGEVYKVSFLEDLWSSVDDVVALRDCEVYSYSPE-EGDPFSDGCLWSFNYFFFNRDVKKILFLHCTAKSKLHMDSDDMGKDSDAXXXXXXXNGGGNAMED-----NSENEFLGDMDMDAPGGDDDSV 1032
MK+L+EP LA + +L++ ELGDR+L+ R +AFSCK+AGDDKRL + LE+ + + +P+ GT P+FG+L+D VRR L+DLI TMNASFPDYDFSGV PD F KE SV+LV NKVN L ++ ++ FLE W+ +D+V+ L+DCEVYSYSP+ EGDPF++GCLWSFN+FF N+++K++LFLHCT KSKLH+ D +G DS XXXXXXX +GDMDM+ GGDDDS+
Sbjct: 1 MKYLDEPRLAYWSNFLRSVELGDRLLSVRTDAFSCKKAGDDKRLSKELERQLSASLPTPSRSSSAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAFGTSPSFGVLTDVGVRRTLVDLICTMNASFPDYDFSGVRPDSFDKEASVSLVRNKVNAALAEVSVIHNKIFLESFWADLDEVMTLKDCEVYSYSPDMEGDPFTEGCLWSFNHFFLNKNLKRVLFLHCTTKSKLHVMEDMLGSDSXXXXXXXXXXXXXXXXXXXXXXXTCPGYIMGDMDMEPAGGDDDSL 289
BLAST of mRNA_S-ischiensis_contig8.19630.1 vs. uniprot
Match: A0A7R9U9D7_9STRA (Repressor of RNA polymerase III transcription n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U9D7_9STRA) HSP 1 Score: 212 bits (540), Expect = 7.580e-64 Identity = 113/217 (52.07%), Postives = 148/217 (68.20%), Query Frame = 1
Query: 301 MKFLEEPSLAALTAYLQNRELGDRVLNGRIEAFSCKRAGDDKRLGRALEQHMLS-LSKSPTGVGTPPNFGLLSDSFVRRLLIDLIFTMNASFPDYDFSGVTPDHFLKEPSVNLVMNKVNTQLTDIGEVY--------KVSFLEDLWSSVDDVVALRDCEVYSYSPE-EGDPFSDGCLWSFNYFFFNRDVKKILFLHCTAKSKLH--MDSDDMGKDSD 915
MK+LE+P LA T L + E+GD VL+GR+EAFSCKRAGDDKRL R L++ + L+ SP P G LS+S R LLIDLI TMNASFPDYDFS + P+ FLKE ++ V+N +NT L + E + FL D+W +V+D++ LR+CEVY Y P+ +GDPFS+G LWSFNYFFFN+ +K+I+F C A+SKL +D +D DSD
Sbjct: 1 MKYLEDPRLAHYTNLLSDFEMGDIVLDGRVEAFSCKRAGDDKRLSRKLDRQLKQELATSPKSPAESP-LGPLSESSTRNLLIDLIITMNASFPDYDFSSLRPEQFLKESHLSFVVNDINTHLAHVDEFRIEGLTSGTEKKFLVDVWRTVEDIIRLRECEVYRYIPDLDGDPFSEGTLWSFNYFFFNKALKRIIFFTCIARSKLFSSVDEEDEELDSD 216
BLAST of mRNA_S-ischiensis_contig8.19630.1 vs. uniprot
Match: A0A836CAL9_9STRA (Repressor of RNA polymerase III transcription n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAL9_9STRA) HSP 1 Score: 212 bits (539), Expect = 9.150e-64 Identity = 102/194 (52.58%), Postives = 135/194 (69.59%), Query Frame = 1
Query: 301 MKFLEEPSLAALTAYLQNRELGDRVLNGRIEAFSCKRAGDDKRLGRALEQHMLSLSKSPTGVGTPPNFGLLSDSFVRRLLIDLIFTMNASFPDYDFSGVTPDHFLKEPSVNLVMNKVNTQLTDIGEVYKVSFLEDLWSSVDDVVALRDCEVYSYSPEE--GDPFSDGCLWSFNYFFFNRDVKKILFLHCTAKSK 876
MKF+E+P LA L+ ++ +ELGD+VL RIE+F+CK AG+DK+ + LE+ M SP PNFG L+++ RR+LIDLI TMN FPDYDFS DHFLK+P V+N VN QL D+ +Y V+FLE LW +VD+ + L+ C VYSY P+ GDPF+DG LWSFNYFF+N KK+L+L C A++K
Sbjct: 1 MKFIEDPKLAELSNWITGKELGDKVLTCRIESFTCKMAGEDKKFSKKLEEEMDKAGVSPASA---PNFGPLNNTSARRILIDLIITMNMHFPDYDFSKAGADHFLKQPDATKVVNAVNAQLVDLTRLYHVNFLEQLWGAVDESIKLKQCSVYSYVPDADLGDPFTDGSLWSFNYFFYNPLRKKMLYLTCIARNK 191
BLAST of mRNA_S-ischiensis_contig8.19630.1 vs. uniprot
Match: F0YN32_AURAN (Repressor of RNA polymerase III transcription n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YN32_AURAN) HSP 1 Score: 206 bits (525), Expect = 8.440e-62 Identity = 103/198 (52.02%), Postives = 140/198 (70.71%), Query Frame = 1
Query: 301 MKFLEEPSLAALTAYLQNRELGDRVLNGRIEAFSCKRAGDDKRLGRALE-QHMLSLSKSPTGVGTPPNFGLLSDSFVRRLLIDLIFTMNASFPDYDFSGVTPDHFLKEPSVNLVMNKVNTQLTDIGEVYKVSFLEDLWSSVDDVVALRDCEVYSYSPE-EGDPFSDGCLWSFNYFFFNRDVKKILFLHCTAKSKLHMD 888
MK LE L+ALTA+L R LGDRV++GR+EAFSCKRAGDDK+L + LE Q+ L+ SP + T G+LS S RRLLIDLI TMNASFPD+DFS + P+ F +E S + V L++I + L++LW++V++ V+L+DCEV+SY P+ + DPFS+G LWSFNYFFFN+ +K+I++ C A+SK D
Sbjct: 1 MKLLENNRLSALTAFLTERSLGDRVIDGRVEAFSCKRAGDDKKLSKQLEKQYADELTSSPGSLDTTSPLGVLSASSTRRLLIDLISTMNASFPDHDFSALRPEQFCREASADFVARSCTRYLSEISD-QGFDLLQELWAAVEEAVSLKDCEVFSYVPDLDSDPFSEGALWSFNYFFFNKTLKRIVYFSCVARSKYSAD 197
BLAST of mRNA_S-ischiensis_contig8.19630.1 vs. uniprot
Match: A0A6G0XTH3_9STRA (Repressor of RNA polymerase III transcription n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XTH3_9STRA) HSP 1 Score: 201 bits (512), Expect = 1.490e-59 Identity = 100/203 (49.26%), Postives = 141/203 (69.46%), Query Frame = 1
Query: 286 ATRETMKFLEEPSLAALTAYLQNRELGDRVLNGRIEAFSCKRAGDDKRLGRALEQ-HMLSLSKSPTGVGTPPNFGLLSDSFVRRLLIDLIFTMNASFPDYDFSGVTPDHFLKEPSVNLVMNKVNTQLTDIGEVYKVSFLEDLWSSVDDVVALRDCEVYSYSPEE---GDPFSDGCLWSFNYFFFNRDVKKILFLHCTAKSKLH 882
A+ + MK+LEE +L+ A L +GDRV+NGR+E FSCK+AG DK+L ++LE + S + PT + + G L+DS R+LLI+LI TMNASFPDYDFS + P+ F KEP + +++N +NTQL +I E+ + FLE LW S+ + + +CEVYSY P+ DPFSDG LWSFNYFF+N+++KKIL+ C ++S H
Sbjct: 4 ASFKKMKYLEEKTLSWANAALNEFCVGDRVINGRLECFSCKKAGQDKKLAKSLELIYQQSNNYPPTTEQSNVSIGTLADSNTRKLLINLISTMNASFPDYDFSDLKPERFHKEPDMRMIVNAINTQLAEIVEMDNMGFLEKLWESIVEAIQPSECEVYSYIPDMDGCSDPFSDGTLWSFNYFFYNKEMKKILYFTCMSRSAFH 206
BLAST of mRNA_S-ischiensis_contig8.19630.1 vs. uniprot
Match: A0A8J2SMK1_9STRA (Repressor of RNA polymerase III transcription n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SMK1_9STRA) HSP 1 Score: 196 bits (498), Expect = 1.170e-57 Identity = 94/200 (47.00%), Postives = 135/200 (67.50%), Query Frame = 1
Query: 301 MKFLEEPSLAALTAYLQNRELGDRVLNGRIEAFSCKRAGDDKRLGRALEQHMLSLSK-SPTGVGTPPNFGLLSDSFVRRLLIDLIFTMNASFPDYDFSGVTPDHFLKEPSVNLVMNKVNTQLTDIGEVYKV------SFLEDLWSSVDDVVALRDCEVYSYSPE-EGDPFSDGCLWSFNYFFFNRDVKKILFLHCTAKSK 876
MK LE P L+ALTA+L R LG+RVL+GR+EAFSCKRAG+DK+L + LE + S+ SP+ + G L+ RRLL+DLI T+NASFPD+DFS + P+ F +E + L ++ + FL++LW+++++ + LR+CEVYSY P+ E DPFS+G LWSFNYFFFN+ +K+I++L C A+S+
Sbjct: 1 MKLLENPRLSALTAFLSQRRLGERVLDGRVEAFSCKRAGEDKKLAKELEAQFAAESRNSPSSMEASSPLGALAQPATRRLLVDLIATLNASFPDHDFSNLRPEQFCREAGAQFAVRACARHLAELATAERFRAPGGGEFLDELWAAIEEAIQLRECEVYSYVPDGESDPFSEGALWSFNYFFFNKRLKRIVYLSCVARSR 200
BLAST of mRNA_S-ischiensis_contig8.19630.1 vs. uniprot
Match: A0A024TW87_9STRA (Repressor of RNA polymerase III transcription n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A024TW87_9STRA) HSP 1 Score: 196 bits (498), Expect = 1.540e-57 Identity = 102/207 (49.28%), Postives = 137/207 (66.18%), Query Frame = 1
Query: 301 MKFLEEPSLAALTAYLQNRELGDRVLNGRIEAFSCKRAGDDKRLGRALEQHMLSLSKSPTGV----GTPP------NFGLLSDSFVRRLLIDLIFTMNASFPDYDFSGVTPDHFLKEPSVNLVMNKVNTQLTDIGEVYKVSFLEDLWSSVDDVVALRDCEVYSYSPEE---GDPFSDGCLWSFNYFFFNRDVKKILFLHCTAKSKLH 882
MK+LEE +L+ A L +GDRV+NGR+E FSCK+AG DK+L ++LE S + T V TP + G L+DS R+LLI+LI TMNASFPDYDFS + P+ F KE + ++N +NTQL +I E+ + FLE LW S+ +A DCEVYSY P+ DPFSDG LWSFNYFF+N+++KKIL+ C ++S +H
Sbjct: 1 MKYLEEKTLSWANAALSEFCVGDRVINGRLECFSCKKAGQDKKLAKSLELLYQSNNNGNTSVVEQQATPATVHNNVSIGTLADSNTRKLLINLISTMNASFPDYDFSDLKPEQFHKEVDMRTIVNAINTQLAEIVEMDNIGFLEKLWESIVAAIAPGDCEVYSYIPDMDGCSDPFSDGTLWSFNYFFYNKELKKILYFTCMSRSAVH 207
BLAST of mRNA_S-ischiensis_contig8.19630.1 vs. uniprot
Match: A0A1V9Z321_9STRA (Repressor of RNA polymerase III transcription n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z321_9STRA) HSP 1 Score: 193 bits (490), Expect = 1.310e-56 Identity = 101/194 (52.06%), Postives = 136/194 (70.10%), Query Frame = 1
Query: 301 MKFLEEPSLAALTAYLQNRELGDRVLNGRIEAFSCKRAGDDKRLGRALEQHMLSLSKSPTGVGTPPNFGLLSDSFVRRLLIDLIFTMNASFPDYDFSGVTPDHFLKEPSVNLVMNKVNTQLTDIGEVYKVSFLEDLWSSVDDVVALRDCEVYSYSPEE---GDPFSDGCLWSFNYFFFNRDVKKILFLHCTAKS 873
MK+L+EP+L A + +GDRV+NGR+EAFSCK+AG DK+L ++LE + ++P VG + G L+DS R+LLI+LI TMNASFPDYDFS + P+ F KE + LV+N VN QL +I E+ + FLE LW SV +A +DCE+YSY P+ DPFSDG LWSFNYFF+N+ +KKIL+ C ++S
Sbjct: 1 MKYLDEPTLDWANAAMSEVSVGDRVINGRLEAFSCKKAGADKKLAKSLEA---AYQQTPD-VGAN-SIGSLADSNTRKLLINLISTMNASFPDYDFSDLKPEQFHKEVDLRLVVNGVNAQLAEIVEMDDMGFLEKLWESVFAAIAPKDCEIYSYIPDMDGCSDPFSDGTLWSFNYFFYNKALKKILYFTCMSRS 189
BLAST of mRNA_S-ischiensis_contig8.19630.1 vs. uniprot
Match: A0A1V9Z7M1_9STRA (Repressor of RNA polymerase III transcription n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z7M1_9STRA) HSP 1 Score: 191 bits (485), Expect = 7.140e-56 Identity = 97/194 (50.00%), Postives = 134/194 (69.07%), Query Frame = 1
Query: 301 MKFLEEPSLAALTAYLQNRELGDRVLNGRIEAFSCKRAGDDKRLGRALEQHMLSLSKSPTGVGTPPNFGLLSDSFVRRLLIDLIFTMNASFPDYDFSGVTPDHFLKEPSVNLVMNKVNTQLTDIGEVYKVSFLEDLWSSVDDVVALRDCEVYSYSPEE---GDPFSDGCLWSFNYFFFNRDVKKILFLHCTAKS 873
MK+LEE L A + +GDRVLNGR+E FSCK+AG DK+L ++LE + +S T G+ G L+D+ R+LLI+LI TMNASFPDYDFS + P+ F KE + +V+N +NTQL +I E+ +SFLE LW S+ + RDCE+Y+Y P+ DPFS+G LWSFNYFF+N+++KKIL+ C ++S
Sbjct: 1 MKYLEEARLDWANAAMSEVSVGDRVLNGRLECFSCKKAGADKKLAKSLEAAYI---QSATASGS---IGSLADANTRKLLINLISTMNASFPDYDFSDLKPEQFKKEIDLRIVVNSINTQLAEIVEMDDLSFLEKLWESIFAAIQPRDCEIYTYIPDMDGCSDPFSEGTLWSFNYFFYNKNMKKILYFTCMSRS 188
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 238.0 |
| Seed ortholog evalue | 4.7e-60 |
| Seed eggNOG ortholog | 2880.D7FXY4 |
| Preferred name | MAF1 |
| KEGG ko | ko:K12394 |
| KEGG Pathway | ko04142,map04142 |
| GOs | GO:0000122,GO:0000182,GO:0000994,GO:0001016,GO:0001030,GO:0001031,GO:0001032,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005829,GO:0005886,GO:0006325,GO:0006342,GO:0006355,GO:0006357,GO:0006359,GO:0006996,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016020,GO:0016043,GO:0016458,GO:0016480,GO:0019219,GO:0019222,GO:0019899,GO:0030424,GO:0030425,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031974,GO:0031981,GO:0036477,GO:0040029,GO:0042995,GO:0043005,GO:0043175,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043565,GO:0044212,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044463,GO:0044464,GO:0045202,GO:0045814,GO:0045892,GO:0045934,GO:0048471,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050811,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051276,GO:0060077,GO:0060255,GO:0061587,GO:0065007,GO:0070013,GO:0070063,GO:0071840,GO:0071944,GO:0080084,GO:0080090,GO:0097159,GO:0097447,GO:0097458,GO:0120025,GO:0120038,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2001141 |
| EggNOG free text desc. | RNA polymerase III core binding |
| EggNOG OGs | COG5046@1,KOG3104@2759 |
| COG Functional cat. | K |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko04131 |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | Repressor of RNA polymerase III transcription Maf1 |
| Ec32 ortholog | Ec-19_002040.1 |
| Exons | 6 |
| Model size | 1082 |
| Cds size | 756 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622817293.8053002-UTR-S-ischiensis_contig8:2666449..2666475 | 1622817293.8053002-UTR-S-ischiensis_contig8:2666449..2666475 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig8 2666450..2666475 - |
| 1695741002.6636348-UTR-S-ischiensis_contig8:2666449..2666475 | 1695741002.6636348-UTR-S-ischiensis_contig8:2666449..2666475 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig8 2666450..2666475 - |
| 1622817293.887947-UTR-S-ischiensis_contig8:2674198..2674498 | 1622817293.887947-UTR-S-ischiensis_contig8:2674198..2674498 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig8 2674199..2674498 - |
| 1695741002.7521372-UTR-S-ischiensis_contig8:2674198..2674498 | 1695741002.7521372-UTR-S-ischiensis_contig8:2674198..2674498 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig8 2674199..2674498 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622817293.817289-CDS-S-ischiensis_contig8:2666475..2666540 | 1622817293.817289-CDS-S-ischiensis_contig8:2666475..2666540 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 2666476..2666540 - |
| 1695741002.677053-CDS-S-ischiensis_contig8:2666475..2666540 | 1695741002.677053-CDS-S-ischiensis_contig8:2666475..2666540 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 2666476..2666540 - |
| 1622817293.828321-CDS-S-ischiensis_contig8:2667307..2667426 | 1622817293.828321-CDS-S-ischiensis_contig8:2667307..2667426 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 2667308..2667426 - |
| 1695741002.6912203-CDS-S-ischiensis_contig8:2667307..2667426 | 1695741002.6912203-CDS-S-ischiensis_contig8:2667307..2667426 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 2667308..2667426 - |
| 1622817293.8409913-CDS-S-ischiensis_contig8:2668373..2668495 | 1622817293.8409913-CDS-S-ischiensis_contig8:2668373..2668495 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 2668374..2668495 - |
| 1695741002.7026567-CDS-S-ischiensis_contig8:2668373..2668495 | 1695741002.7026567-CDS-S-ischiensis_contig8:2668373..2668495 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 2668374..2668495 - |
| 1622817293.853896-CDS-S-ischiensis_contig8:2669583..2669685 | 1622817293.853896-CDS-S-ischiensis_contig8:2669583..2669685 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 2669584..2669685 - |
| 1695741002.7147944-CDS-S-ischiensis_contig8:2669583..2669685 | 1695741002.7147944-CDS-S-ischiensis_contig8:2669583..2669685 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 2669584..2669685 - |
| 1622817293.8648179-CDS-S-ischiensis_contig8:2670318..2670563 | 1622817293.8648179-CDS-S-ischiensis_contig8:2670318..2670563 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 2670319..2670563 - |
| 1695741002.7265468-CDS-S-ischiensis_contig8:2670318..2670563 | 1695741002.7265468-CDS-S-ischiensis_contig8:2670318..2670563 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 2670319..2670563 - |
| 1622817293.876435-CDS-S-ischiensis_contig8:2674095..2674198 | 1622817293.876435-CDS-S-ischiensis_contig8:2674095..2674198 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 2674096..2674198 - |
| 1695741002.7414606-CDS-S-ischiensis_contig8:2674095..2674198 | 1695741002.7414606-CDS-S-ischiensis_contig8:2674095..2674198 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 2674096..2674198 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig8.19630.1 >prot_S-ischiensis_contig8.19630.1 ID=prot_S-ischiensis_contig8.19630.1|Name=mRNA_S-ischiensis_contig8.19630.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=252bp
MKFLEEPSLAALTAYLQNRELGDRVLNGRIEAFSCKRAGDDKRLGRALEQ HMLSLSKSPTGVGTPPNFGLLSDSFVRRLLIDLIFTMNASFPDYDFSGVT PDHFLKEPSVNLVMNKVNTQLTDIGEVYKVSFLEDLWSSVDDVVALRDCE VYSYSPEEGDPFSDGCLWSFNYFFFNRDVKKILFLHCTAKSKLHMDSDDM GKDSDADDSDADDNGGGNAMEDNSENEFLGDMDMDAPGGDDDSVDQERAG W* back to topmRNA from alignment at S-ischiensis_contig8:2666450..2674498- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig8.19630.1 ID=mRNA_S-ischiensis_contig8.19630.1|Name=mRNA_S-ischiensis_contig8.19630.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=8049bp|location=Sequence derived from alignment at S-ischiensis_contig8:2666450..2674498- (Schizocladia ischiensis KU_0333) ACGGTGTGTGCTGCTGTTTGGAGGCGCTTCGGAGTGCGCGCTGACGAGAC
GATACAGCTGCTATAACCCCGCGCTGGTTGACTTGGACGCGTTGAGCGAC
CACCCGTTGTCTTCTGTGGCGGTGGTTTCGGTGGTAGTCCGGAATCGTTT
AGGCTTGGACGGATCGGGTTGAATGCTCCGGAGGTGGACGGGACCCCTTG
GTACTCGAGTGGGCCGCGGGTCGCAGCAGCTTTGGCGCGGAGCACGTGGA
CAGCACATCTTGCACACGGGGCGGGTCCTGGAGAGGCGACTAGGGAAACT
ATGAAATTCTTGGAAGAGCCTAGCCTCGCGGCGTTGACGGCCTACTTGCA
AAATCGAGAGCTCGGGGACCGCGTCCTCAACGGACGAATAGAGGCCTTCT
CATGTGAGTCGCACGCGGCACGCCCCGGAAACAGGCTAGCGGTGGGAATA
AAAAGCGTTCCTGGGTCACCGGTGCCTCTGAGACATGCCATTGGGGGGGT
TCGATTTCAATTTTTCACCACAGCAAGGGTTGTTTTTGCAACGAGCTTAG
CGCGCCTAGCAGCTGACTGACTGAGGCGCACACCCTGCTCCTGCCGCACG
GCCGTGAATGGTGCGCGTTCGTGTTCGGTGGCATAACTGGTTGACCCGCA
CGGCGCACCACCACGGCACCACCTTGTGCCTCCGGGTGCTCGAAACGTCG
GTTACTTTTCTCGGTTATGCCCCCCCGCGGCCCTTCCTCCTGCCCCCTCA
TCCTCCTCTTCTCCACGTCCTCACTCCTATCGCCCCGCTCTCCGCCCGCC
TCTGGTTGTAGAGGGATGAACCGATACACACCCCGGACAAATACAACTAC
TACACTATTCGGGTAAAAACGTGGGCACAGCTGATTGGCCAAAATCGTGG
GCCAACTAAGTAGGTTGGGCAACAAACTACAACTAGTTGGTAGTTGGAAC
TACTTGGATCAAGCCAACCAACTACTTGGTTGTATTTTTCCGCGGTGTGA
ACCGATAGGCCGAATCGCTATTTTCCGCCCCGACCCGGCGACTGATCGAT
TCAGTTTTCGGTGTTTCTTGGGTATGTTTCGGATGGCCGACATGTGTTTT
AGACCTTTTTTGTCATTTTCTGTTGCAGGTAACGGCTACCGTGGGTGGGT
ATCGACTGGCGTTACCGGTAGGGAGGGCAGTACCGACTACTACTCTCAAG
GTCACAGTATTGATACTTACGCATGATGTTTTTCAAGGAGCGGAAGAACC
GAAAACCCGGGGGCTTGTCCAATCGATTGTCGGTTATTATTATCGGTTGA
GTCTCAACCGACCCAATATCGAAAAACAAAACAAAAACTGGTTTGCGTTA
CGACTTGCGAGAAAGCGCCGCGCACTGTGGAGTCCATTTGTCACGTGGAC
CGCACTCGCTTGCCATCCGTCTTACTTACTTACAAGTATTCGAGCTTTCG
CTTGGTTCTTGGGCACAATGGTTTGCGTGCCGTCCTGGGCAGGGTTGGCG
CTTAACCCTTTTAGGCCCTCGATTAGGGGTGATTGGGGGTAGCTAGACCT
AAGGTGAAGGCCAACTAGGCCCTAATTAGCCTTTGCAAGTGCCAACCCTG
GTCCAGGGGGGCGTGCCGTTTCGCGGCTGTGCTTCCTGCCTGCTTCTCGT
TCGTCCCTGTTCCGGGAGCGGCCCGATGGCCCGCTGCGGGCTGCACTTCC
CATCCACGCCAGCAATGGGTTGCTTTGCCGGTTGTACCCGTAGCGGCAAA
GCAGTTATATGTACTGGTTTACTCGAGTGCATATATAGAGCTCTATATGT
ACTCATGATGTGTTTGCTATAGCCCCGAGACTATTGCCTACACGCCACCG
AGGGCGGAGCATTCTCCCTCCCCCCCCCTGGCGAGCCGGGATACAACATA
TCTTCCGTATGTACCGTACGGAATGTAAAGGTTTAGGCCTTTTTTATGAT
GGCAGAACATGACCCGGCGGATTTTGCCTCTACTCGATGTTGATGCCTTT
TTTTGCGTGAGATTCGCGGGGAATAGAGTGTCACGATGCCCTCGCCCCCA
CCAGCCAAGGCGTTTTGAATCGGGAAATAGCAAAAATCGGTTCTTGTCAT
TCTCTGCCAGAAACTCAGGTAGCTGTGGGTTTGACCGAAAATGACGGTTC
TTTCAAACCCACAGCTACCAGAGTTTCTGGCAATATATAGATATGTACTC
ACGTGGTGCTTGCCGTAGTCCTGAGACCATTGACCCCGCGCCTCGTTCGA
GGCGGAGCAGGAGTGAGTGTATATATATACATAAGATGTACTCATTGGTT
TGTCTTGCGACATAACCTTGCGTGCAATGCCGACAGCCCTAAGTCGAAAC
TTCGGGTTCGTACTGTATATATATATATATGTACTCACGTGGTGCTTGCC
GTATCCCAAGACCATGGGCCCCGCGCCTCGTTCGAGGCGGAGCAGGACCC
CTCCCGCCCCTGTACAAGTAGCAGCACATATTTACATTTGTGATTTGCAA
AGTACTACTTCAAGGTGTGTACATGCTTTTACCCACCGAATCTCAGCGAG
CACGCTCAGTTCCACGAGCATGAGTTTGTGCCTCGATGTTGTGCGTTTGA
AGCAATGCTGTTATTGCCATTTCCTGCGGAATAGGTGCCGTTATTGAGCA
ATAAAACTACAAGTAGGGTGAACTCCGGCAAAAAAAGCCCAAAATTGGTT
TCCAGTCCTCCTGATAAGCCTCGCACATTCACACGCCCTAGATAGAAGAG
TTGGCCATGGCATGTACAGTAGTACAGTACAGTACCATACATCACACTGA
TGCGTCCCTGCTAGTATGCCGTACGCGACACCTGATGAGACACAGATCTT
CAAGAAACAATGGCTTGGATCGGGCCAAGTTGCAAGAAACGCCGAAGGCT
TCATACCGCCGCCGGCTTCAGAACCGGCTCATTTACCGTGCCGAGACCCC
CTGTGGACGCCTCCCGAGGTCGTCTTAGCCCTTTTACCCCCGGGGTCCGT
ATAATCATAGGCATTTAGTGTGGAAATCCAGTTTTGCAGGGGCGAAAGGG
TTAAGCCTCGAGCAACCGCGGTAGGCCCTGGTTTTATACGCCTCCCCGGA
AAACGGGCAGTCGCACAGCTCCCTATCAAAACATGGCTCTGAGGTGGGAT
GGATGCGGGTACTTGATGACAGTTGATATGAGTATCAACTTGTTGCCCGG
CATCTTTCCCAGCTAAGAGTGACGCTCGATAGGGAGAAACGCGATTCCCG
GTTTTGGGGGGTGGCTTCTTATGAAACCAGGGCCTAGACCGAGGCAATGG
GCGAGTTTCGGCCCCGAGAGCATACAGGGGGGCAGATTCGAACGCCGGGG
TCCCTGCGGAAGACCAATATTTGGGGCGGTTCATATACGAAGTACATTGT
AACGAGGTACAATCGCGCGTGTGTGGATTGAATATGTTGGGGGAGTCTGT
TGGGACAACATAAACATATGGAATGTACCTTCGTTTTTGCCGGTGAACGC
TCGATTGCCACGATTCGTGGGAGTCATGGACGGGGCGTGTGTGGAATTGG
CCCAACCCCCCGCCCCTGGCAGAGGTGTGCCCCCCCGCTCCCCCTCCCGT
GGTCAATGGTCTCGGGACTACGGCAAGCACGACGTGAGTGCATGTACTGA
GTGTACTATGTACACAATCGTAAGCAACTTGCCCCACAGGCAGGCGTGCA
TCATCGGCGTAGGTAGGTAGGGGCGACAAGTTGCGCGGCGCAGAGGGAGG
AGCAGCGCGTGCTTCGTTTGTGTGTTTGTTTCGTGTTGAAAAGCGCCGGA
CCTGACCTGACCGCTCTCTCCGAAATACTTACTTTACTGCCCGTGTTGAT
GTCTTTAGTGAGGTGGCCTGCACCTCGCCCTGTGTCGTGAACTATCCTGC
TAATACTGCCCGTCCCACGCCATCATCCTGTCCAGGCAAGCGGGCCGGGG
ACGACAAGCGGCTTGGCCGCGCACTTGAGCAGCACATGCTCTCACTGTCC
AAGTCGCCGACTGGGGTGGGGACGCCCCCCAACTTTGGGCTGCTGAGCGA
CTCGTTCGTGCGTCGGCTGTTGATCGACCTGATCTTCACCATGAACGCCT
CCTTCCCCGACTACGATTTCAGCGGGGTCACGCCGGACCACTTCCTCAAG
GAGCCCAGCGTTAACCTGGTCATGAACAAGGTCAGGAAGAGTCGACGAAG
GTTCCGTTTCGAAGCCCCGCGAGTGGTCAAGCTAGGGAGTGCAATAGCGG
GAAGAGCGTGCGTGCGGGGGGAAGCGTGTCCCCTGCGGGATAACATTACA
CTTCTTCGCAGATATACCGGGGTCACTTCTGCCAGAAACCGTGGTAGCTG
TGGGACGTCTTGTACACTTCCCCGATGTCTGCGAGCTGGGTGTTCACCTG
GGAAGGCGTGTCCCCTGATGGACAAGACTCTTAGCATGCTTTGTGCCCTG
CTTCAGATGTACTGGGGCCACTTCTTGAGAATCCCCAAGTTAACTAACGT
GGGCACGAGCAAGGCACACACAGCACAAGAGTTGGCGGCCTACAAGCTTA
CGAGTAGGTTGTGCTCGACTGAATCGTGGCATGTGCTTGTAAACGGTCGG
CTCTTGTCTCGGTCGACGCGCGTGGCCAATGGCTTCGGGACTGCGACGAG
CACAACGTGAGTACGAGCACGAGCACTTTTGAAGTACACGCTTCTTCCAA
GTTTGTCTGTGAAGGCAAGTATGTGCAAGTAGAAGTCGACAGAGAGGGAT
TAAACCAAGGTGTCTTGCTCACCGCCCCAGTCCGTTCCGCCCCCCCCCCT
ACCGCCTCCTCAGGTGAACACCCAGCTGACAGACATTGGGGAAGTGTACA
AGGTGTCCTTCCTGGAAGATTTGTGGTCAAGTGTGGACGACGTCGTGGCT
TTGCGGGACTGCGAGGTGAGCTAGATGTGTCTTTTCGCCGGTCGACTACA
GGTGTGCCCGGTCGGTGCAAGCATGACGTGCTCAGTCTCGGCTTCGTAGG
GGCGCTATAGGGGGTCGATGGCCGAAGTGCGATTGTATGACTATGCACAG
CGTGTGGAGGAGTTAAGACGATGCACGTGAATCGTGAGTACGCGCAAGTG
TTTCGCTGTGGCGGAAGATGGGTCGGTGTTGCTTTCGTTTGCCTCGGTTC
AGGGGCGTTGGTGTATCGTACGCAGGGACATCTGCACGGTGGTGGTTCGG
GGACGAGTGTGAGTGTTTGAGGTGCAAAACGGCCCACACGCTCTAAGGTA
GGCTCAGCTGCTGAACCTGTACAGTACAAGTTCAGGGCCTCTGTTAGCTG
CGGTAGAGAACCTCTGTTGGCTGCGGTAGAGTGTGCCTCTGCTAGCTGTG
GCAGAGTATCTCTGTTAGCTGCAGTTGAGGACCTCTGCTAGCTGCGCTAC
GCAGTAGAGAACCTTTGTTAGCTGCGGTGGAGTGCCTCTGTTAGCTGCGC
AATTGAGGACCTCCGTTCGACGCGGTTGAGGGGCTCTGTTGACTGCGGCC
GAGGACCTCTGGTAGCTGCGGGAGAGGGCCTGTTGGATTGGCTTGATACA
AGCACGGGTGTGTTTTCAGAGTGTGGGACAGGTGTAAGGTATCTCTGCTG
TACACTGCCGCCGTTGTGCAAGGGTCAGGCATGGCTGTGCCCCCTGCGGT
GCAGCCTCCTGCCGCAGGAAAATGACAGCAGCAGCCATGGCTCAAACATA
GCACGCACGCTTAGCCTCAACAGTAGTTTCACAACACTGTTCGCCGGCGT
CGCTGGTGCGGCGACGGTGGCGGGTGGCTGCGAGCTGCGGCGGCATTGTG
GCGTGGTGTGTTGATATACCGTGTTCTCTCTCTGTCTCTGTATCACTGAC
TCCACTCTCTCCCCTCCCCCCCACCCCCCCCCTCTCTCCCTCTCTCCCTC
CCTCTTTCTCTCTCCCGGCCGCTCTCTCTCTGTCTGTCTCTCTCTCTGTG
CGTGGCTGCGTGTCCGTGTGGGGGTGGGTGGGTGGGTGGGGGGGGCGGCG
CAGGTATACTCCTACTCGCCGGAGGAGGGGGACCCTTTCAGCGACGGCTG
CCTGTGGTCATTTAACTATTTCTTCTTCAACCGCGACGTGAAGAAAATAC
TCTTCCTGCACTGCACCGCCAAGAGGTAAGGACAACGGAACATACGGTAC
GCTGATTCAATTCCCGCACCGCACATCGAAGAGTGAGGTATGCCTTTGCA
GCCCGCAGAGGACAAAAGGGCTCACGAACCTCACGCGTTGGGCCCTGGTG
TGGGACAAGTGTTGGATCAGTGTACTCCCACATATAACGTGAAGTGGGCT
TTTGAGGACGGCGGACGGGTACGCTACTCCCCCCCCTAGGCTAACTTACG
TGCCATCGCCCACCGCTCTGTCTGTATGGTAGGCCATGTGGTGTTTAGCT
GGTGAATGAGTGGTGATCCATACAAATTGTAGCGAGGTACAATGGCGGTG
AATTAGTGGATTGGTGCTCCCGTCTCAGTCGAGGCGCTATAGGGGTCAAT
GGTCTCTGGACTACGGCAAGCGCAGCGTGAGTACACGCACACGCATGCAC
ACACTTTTATGTACATGTACTTCGTACTTCGTAGTACTCATGACCAGTAC
GGCAGTGATTGGATACTGTAGCGTTTTTTTAGAAACTTTTTTTGTTGCCG
TGGTTGTCCCCCTTGCTGTTTTAGCTGTGTTATTTATTCGCGCGCTAAAC
CGCAGCAGTTTGACCATCACGCGGCACCAGTGTACCTCCAAGGATCGCAG
TCTTTGTCATATTGGTTTCGCTCGCCGCCCTGCTCCGCTCCGCTCCGGTC
GAGGCCTGTAGTCCAGGGTCTCAGAACTGCAGCAAGCTCTACGCGAGTAC
ATTTCACGTACAGTACCACATTTGCTGTACAAGTACTTCGTACATACACT
ACTCCTCGCACTTCCAAGTACACGTTTACCCCCCCCCCCGGCTGGATCAA
ATCAACATTTGCTGTACACATTGTACATACGTAGACCTACTCATACTTCC
AAGACCAATACTCGAAGTGCATGTTATCCTCAACCCCCCCACCTCCCTGG
CCGGACCACACCGCCGCTGCAGCAAGCTGCACATGGACAGCGATGACATG
GGCAAGGACAGCGACGCCGACGACTCGGACGCCGACGACAATGGCGGCGG
CAATGCAATGGAGGATAACTCCGAGAACGAGTTCCTGGGCGGTGAGTGCC
AGGGGCCGCTGAGATTATTTCGTGGGTAAGTAGAGTTGGTATGCTGTGCG
TAGAGTAGCGCGCGAAAGCGCAAGCAAGTAGGGGCACATCTGGCCTGGAA
GAATATGCTACGAGTACTACTGTACTAGTAGTAGTGCTCCATCTCGAACG
AGGCGCGGGGTCAATGGTCTCGGGACTACGGCAAGCACCACGTGAGTACA
TATATATACTACGTAGTATATATAGTAGTAGTACTGTGTTGTATGTACTT
GAGTACTCCTGACCCCCCGGTGTGTTCTATATCCGGCGACGTAGGGACGT
GAGGCCAATGTCCGAAAGGCTGCCCTGCGGGGGCTGGCCGGCTGTCCAGC
AAGCAGTGTGCTGGGCCGACGGTCGGTGGCATGCACGCCTTGACGGGGTG
TGATAACAACCCTGTCCGACATGAGTACACGCTACTGTAGTACTCGAGTA
TATATATATATATATATGTACTCACGTGGTCCTTGCCGTAGTCCCGAGAC
CATTGACCACGCGCCTCGTTCGAGACAGAGCAGTATGGACCTATAGGTAC
AGTGTTGTACTAGCGTAGTAGGGTGGAATGACTTGTACGAGTAGAGTTCG
GGCTTGATCAGGATTGGGGCCTTGACCCTTCGTGGGCCGACACTGGCTAT
GTTACGAGTACGTTACATAGGAAGTAGTTGGGCGTAAGTTACAGTGAGCT
AAACCTTCTTTGGTTTCCTGTACGAAACCCGCAACTACTGTACGTACTGT
ATGTGCAGACATGGACATGGATGCTCCCGGCGGGGACGACGACTCTGTGG
ATCAGGAGCGGGCCGGGTGGTGAGGGGGGGGGAGGGGCCGGCCACCCAG back to topCoding sequence (CDS) from alignment at S-ischiensis_contig8:2666450..2674498- >mRNA_S-ischiensis_contig8.19630.1 ID=mRNA_S-ischiensis_contig8.19630.1|Name=mRNA_S-ischiensis_contig8.19630.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1512bp|location=Sequence derived from alignment at S-ischiensis_contig8:2666450..2674498- (Schizocladia ischiensis KU_0333) ATGAAATTCTTGGAAGAGCCTAGCCTCGCGGCGTTGACGGCCTACTTGCA AAATCGAGAGCTCGGGGACCGCGTCCTCAACGGACGAATAGAGGCCTTCT CATATGAAATTCTTGGAAGAGCCTAGCCTCGCGGCGTTGACGGCCTACTT GCAAAATCGAGAGCTCGGGGACCGCGTCCTCAACGGACGAATAGAGGCCT TCTCATGCAAGCGGGCCGGGGACGACAAGCGGCTTGGCCGCGCACTTGAG CAGCACATGCTCTCACTGTCCAAGTCGCCGACTGGGGTGGGGACGCCCCC CAACTTTGGGCTGCTGAGCGACTCGTTCGTGCGTCGGCTGTTGATCGACC TGATCTTCACCATGAACGCCTCCTTCCCCGACTACGATTTCAGCGGGGTC ACGCCGGACCACTTCCTCAAGGAGCCCAGCGTTAACCTGGTCATGAACAA GGCAAGCGGGCCGGGGACGACAAGCGGCTTGGCCGCGCACTTGAGCAGCA CATGCTCTCACTGTCCAAGTCGCCGACTGGGGTGGGGACGCCCCCCAACT TTGGGCTGCTGAGCGACTCGTTCGTGCGTCGGCTGTTGATCGACCTGATC TTCACCATGAACGCCTCCTTCCCCGACTACGATTTCAGCGGGGTCACGCC GGACCACTTCCTCAAGGAGCCCAGCGTTAACCTGGTCATGAACAAGGTGA ACACCCAGCTGACAGACATTGGGGAAGTGTACAAGGTGTCCTTCCTGGAA GATTTGTGGTCAAGTGTGGACGACGTCGTGGCTTTGCGGGACTGCGAGGT GAACACCCAGCTGACAGACATTGGGGAAGTGTACAAGGTGTCCTTCCTGG AAGATTTGTGGTCAAGTGTGGACGACGTCGTGGCTTTGCGGGACTGCGAG GTATACTCCTACTCGCCGGAGGAGGGGGACCCTTTCAGCGACGGCTGCCT GTGGTCATTTAACTATTTCTTCTTCAACCGCGACGTGAAGAAAATACTCT TCCTGCACTGCACCGCCAAGAGGTATACTCCTACTCGCCGGAGGAGGGGG ACCCTTTCAGCGACGGCTGCCTGTGGTCATTTAACTATTTCTTCTTCAAC CGCGACGTGAAGAAAATACTCTTCCTGCACTGCACCGCCAAGAGCAAGCT GCACATGGACAGCGATGACATGGGCAAGGACAGCGACGCCGACGACTCGG ACGCCGACGACAATGGCGGCGGCAATGCAATGGAGGATAACTCCGAGAAC GAGTTCCTGGGCGCAAGCTGCACATGGACAGCGATGACATGGGCAAGGAC AGCGACGCCGACGACTCGGACGCCGACGACAATGGCGGCGGCAATGCAAT GGAGGATAACTCCGAGAACGAGTTCCTGGGCGACATGGACATGGATGCTC CCGGCGGGGACGACGACTCTGTGGATCAGGAGCGGGCCGGGTGGTGAACA TGGACATGGATGCTCCCGGCGGGGACGACGACTCTGTGGATCAGGAGCGG GCCGGGTGGTGA back to top
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