mRNA_S-ischiensis_contig8.19610.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig8.19610.1 vs. uniprot
Match: A0A6H5KW72_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW72_9PHAE) HSP 1 Score: 255 bits (652), Expect = 5.590e-77 Identity = 130/202 (64.36%), Postives = 161/202 (79.70%), Query Frame = 1
Query: 4 KLPACHPLEVDKDRPQASLYGLQGPLPFKAFMRQAKRQAVDHLAEALGGDRLAAEYALLALLSRVDARTESVALGSLALNLSGVPPSSSAAFHRAVSALVPKCSLVPVTTDSLSQEYKFAPKKDYDADRLMLSALQLSPGTVVLLDETALGPGQVGADGVRNVSALRSLLTLQKVPYEFSYYSMDFDVDHPVVALSGAKSML 609
+LPAC PL VD +PQ +L LQGPLPF FMR AK++ + HLA+AL GD LAAEY LLALLSR RTES+A GSL+LNL GV P + FH AVS LVPKC VPVTT SLS+++KF+PKKDY+ADRLM+S+LQLS GTVV+LDET+L PGQVG +GV N++AL SL++LQKVPY+F +Y MDF+VDHP ++LS S++
Sbjct: 362 QLPACTPLMVDPKQPQDALRALQGPLPFSVFMRNAKQETIKHLAKALRGDVLAAEYVLLALLSRAYVRTESLAPGSLSLNLRGVRPDDAPGFHAAVSNLVPKCVTVPVTTKSLSEKFKFSPKKDYEADRLMMSSLQLSDGTVVVLDETSLEPGQVGTEGVTNLAALNSLMSLQKVPYDFGFYKMDFEVDHPTISLSARGSVV 563
BLAST of mRNA_S-ischiensis_contig8.19610.1 vs. uniprot
Match: A0A7S0NHD5_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0NHD5_MICPS) HSP 1 Score: 131 bits (330), Expect = 7.780e-33 Identity = 83/182 (45.60%), Postives = 114/182 (62.64%), Query Frame = 1
Query: 70 QGPLPFKAFMRQAKRQAVDHLAEALGGDRLAAEYALLALLSRVDARTESVALGSLALNLSGVP-----PSSSAAFHRAVSALVPKCSLVPVTTDSLSQEYKFAPKKDYDADRLMLSALQLSPGTVVLLDETALGPGQVGADGVRNVSALRSLLTLQKVPYEFSYYSMDFDVDHPVVALSGAK 600
+G + A +R A + HLA LGGD LAAEY L A++SRV RT+S+ALG L++ L GVP P + AA A++ + P + +P++ L+ + PKKDY +RL LQL+PGTV +LDETAL GQ+ GVRNV AL+ L+ LQ++ Y+F Y+ M VD PVV L+ AK
Sbjct: 63 EGAIEAPAEIRTA---LIQHLAVPLGGDVLAAEYVLAAIVSRVHTRTDSLALGKLSVTLMGVPEGGDLPRNLAA---AIADIAPYVAHLPLSIAGLNAR-SWTPKKDYGVNRLRSGPLQLAPGTVAILDETALTSGQLRETGVRNVQALKQLVQLQELEYDFQYHQMRMPVDVPVVVLTSAK 237
BLAST of mRNA_S-ischiensis_contig8.19610.1 vs. uniprot
Match: A7RN02_NEMVE (Mini-chromosome maintenance complex-binding protein n=2 Tax=Nematostella vectensis TaxID=45351 RepID=A7RN02_NEMVE) HSP 1 Score: 130 bits (327), Expect = 4.780e-31 Identity = 77/168 (45.83%), Postives = 109/168 (64.88%), Query Frame = 1
Query: 130 LAEALGGDRLAAEYALLALLSRVDARTESVALGSLALNLSGVPPSSSAAFHRAVSALV--------PKCSLVPVTTDSLSQEYKFAPKKDYDADRLMLSALQLSPGTVVLLDETALGPGQVGADGVRNVSALRSLLTLQKVPYEFSYYSMDFDVDHPVVALSGAKSML 609
L + L GDRLAAEY LL LLS V R+ +A+G A+NLSG+P + +S+ V PKC L+P+T ++L+ F PKKDY DRLM LQLS GT ++LDETA+ GQ+ A GV+NV++L +L++ QK+ Y+F++Y +F VD V+ +S KS+L
Sbjct: 344 LEKLLCGDRLAAEYLLLHLLSTVYTRSGVMAVGKFAINLSGLPTQQTLPLEERISSQVAKFLKHVLPKCHLLPMTLNNLNS-LNFIPKKDYTKDRLMSGMLQLSNGTELVLDETAMEAGQLNATGVQNVTSLGNLMSWQKLAYDFNFYKTEFMVDIKVLVMSEGKSLL 510
BLAST of mRNA_S-ischiensis_contig8.19610.1 vs. uniprot
Match: A0A2K1IR71_PHYPA (Uncharacterized protein n=3 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1IR71_PHYPA) HSP 1 Score: 130 bits (326), Expect = 5.900e-31 Identity = 76/176 (43.18%), Postives = 113/176 (64.20%), Query Frame = 1
Query: 103 QAKRQAVDHLAEALGGDRLAAEYALLALLSRVDARTESVALGSLALNLSGVPPSS-------SAAFHRAVSALVPKCSLVPVTTDSLSQEYKFAPKKDYDADRLMLSALQLSPGTVVLLDETALGPGQVGADGVRNVSALRSLLTLQKVPYEFSYYSMDFDVDHPVVALSGAKSML 609
+ ++ +D+L +LGGD LAAEY LL LLS+V AR +++ALG L+LN++G P S +A +S LVP+ L+P++ +L+ AP+KDY ++RL+ A+QLS GT + LDETAL G + + GV+N+ L+ LL QKV Y+F Y+ M+ D PV+ LS KS +
Sbjct: 322 ETRKSLLDYLTFSLGGDALAAEYLLLHLLSQVHARVDAMALGKLSLNITGCNPGSEGGLSPTAATAADVISKLVPRSHLMPLSLQTLNHA-PVAPRKDYVSNRLVTGAMQLSDGTHLTLDETALQAGTLNSVGVQNLEVLKHLLQWQKVEYDFQYHKMEMPADVPVLVLSQGKSRI 496
BLAST of mRNA_S-ischiensis_contig8.19610.1 vs. uniprot
Match: UPI0019398623 (mini-chromosome maintenance complex-binding protein-like n=1 Tax=Styela clava TaxID=7725 RepID=UPI0019398623) HSP 1 Score: 129 bits (325), Expect = 8.820e-31 Identity = 80/164 (48.78%), Postives = 109/164 (66.46%), Query Frame = 1
Query: 130 LAEALGGDRLAAEYALLALLSRVDARTESVALGSLALNLSGVPPSSSAAFHRAVSA----LVPKCSLVPVTTDSLSQEYKFAPKKDYDADRLMLSALQLSPGTVVLLDETALGPGQVGADGVRNVSALRSLLTLQKVPYEFSYYSMDFDVDHPVVALSGAKSML 609
L +AL GD LAAEY LL L+SRV +R + +ALG +LN+SG+PP+S+ + R +S LV K +P++ D L+ E KF P K+Y +RL LQLS GT ++LDET L PG + A+GV+NV AL+++LT QKV Y F ++ FD D V+ LS KSML
Sbjct: 334 LEKALLGDSLAAEYLLLHLISRVYSRRDMLALGKFSLNISGIPPNST--YPRILSKFLQDLVTKLYYLPMSIDKLN-EGKFIPTKNYSTNRLDSGILQLSTGTHLVLDETMLKPGTMDANGVKNVQALKNVLTFQKVDYNFQFHEASFDCDINVLILSEGKSML 494
BLAST of mRNA_S-ischiensis_contig8.19610.1 vs. uniprot
Match: C1E1U7_MICCC (Uncharacterized protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1E1U7_MICCC) HSP 1 Score: 128 bits (322), Expect = 1.890e-30 Identity = 79/165 (47.88%), Postives = 107/165 (64.85%), Query Frame = 1
Query: 121 VDHLAEALGGDRLAAEYALLALLSRVDARTESVALGSLALNLSGVP-----PSSSAAFHRAVSALVPKCSLVPVTTDSLSQEYKFAPKKDYDADRLMLSALQLSPGTVVLLDETALGPGQVGADGVRNVSALRSLLTLQKVPYEFSYYSMDFDVDHPVVALSGAK 600
+ HLA LGGD LAAEY L A++SRV RT+S+ALG L++ L GVP P + AA A++ + P + +P++ L+ + PKKDY +RL LQL+PGTVV+LDETAL GQ+ GVRNV AL+ L+ LQ++ Y+F Y+ M VD VV L+ AK
Sbjct: 311 IQHLAVPLGGDVLAAEYVLAAIVSRVHTRTDSLALGKLSVTLMGVPEGGDLPRNLAA---AIADIAPCVAHLPLSIAGLNAR-SWTPKKDYGVNRLRSGPLQLAPGTVVVLDETALTSGQLRETGVRNVQALKQLVQLQELEYDFQYHQMRVPVDVAVVVLTSAK 471
BLAST of mRNA_S-ischiensis_contig8.19610.1 vs. uniprot
Match: A0A2B4RGL3_STYPI (Mini-chromosome maintenance complex-binding protein n=1 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4RGL3_STYPI) HSP 1 Score: 126 bits (316), Expect = 1.470e-29 Identity = 73/173 (42.20%), Postives = 110/173 (63.58%), Query Frame = 1
Query: 97 MRQAKRQAVDHLAEALGGDRLAAEYALLALLSRVDARTESVALGSLALNLSGVPPSSS--AAFHRAVSALVPKCSLVPVTTDSLSQEYKFAPKKDYDADRLMLSALQLSPGTVVLLDETALGPGQVGADGVRNVSALRSLLTLQKVPYEFSYYSMDFDVDHPVVALSGAKSML 609
+ + + V L + + GD LAAEY LL L+S V + T + +G LN+SG P S S H+ V LVPKC +P+T ++++ F PKKDY A+RL S LQLS T +++DETAL GQ+ A+GV+NV+AL ++++ QK+ Y+F++Y DF + ++ LS KS+L
Sbjct: 334 LADVRGEVVSLLTQVMCGDSLAAEYLLLHLISSVYSWTGIMPVGKFTLNVSGCPSSDSFPKEMHKLVEHLVPKCHFLPMTLNNMNT-LNFVPKKDYTANRLKSSILQLSQSTNLIVDETALQAGQLNANGVKNVTALGNVISWQKLEYDFNFYKADFTTNLLILILSEGKSLL 505
BLAST of mRNA_S-ischiensis_contig8.19610.1 vs. uniprot
Match: A0A3M6U6Q4_POCDA (Mini-chromosome maintenance complex-binding protein n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6U6Q4_POCDA) HSP 1 Score: 125 bits (314), Expect = 2.750e-29 Identity = 73/182 (40.11%), Postives = 112/182 (61.54%), Query Frame = 1
Query: 70 QGPLPFKAFMRQAKRQAVDHLAEALGGDRLAAEYALLALLSRVDARTESVALGSLALNLSGVPPSSS--AAFHRAVSALVPKCSLVPVTTDSLSQEYKFAPKKDYDADRLMLSALQLSPGTVVLLDETALGPGQVGADGVRNVSALRSLLTLQKVPYEFSYYSMDFDVDHPVVALSGAKSML 609
+ +P + + + V L + + GD LAAEY LL L+S V + T + +G LN+SG P S S H+ V LVPKC + +T ++++ F PKKDY A+RL S LQLS T +++DETAL GQ+ A+GV+NV+AL ++++ QK+ Y+F++Y DF + ++ LS KS+L
Sbjct: 324 EASVPILQQLADVRGELVSLLTQLMSGDSLAAEYLLLHLISSVYSWTGIMPVGKFTLNVSGCPSSDSFPREMHKLVEYLVPKCHFLSMTLNNMNS-LNFVPKKDYTANRLKSSILQLSQSTNLIVDETALQAGQLNANGVKNVTALGNVISWQKLEYDFNFYKADFTTNLLILILSEGKSLL 504
BLAST of mRNA_S-ischiensis_contig8.19610.1 vs. uniprot
Match: V4AT78_LOTGI (Mini-chromosome maintenance complex-binding protein n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4AT78_LOTGI) HSP 1 Score: 125 bits (313), Expect = 3.970e-29 Identity = 78/192 (40.62%), Postives = 117/192 (60.94%), Query Frame = 1
Query: 88 KAFMRQAKRQAVDHLAEALGGDRLAAEYALLALLSRVDARTESVALGSLALNLSGVPPSS--SAAFHRAVSALVPKCSLVPVTTDSLSQEYKFAPKKDYDADRLMLSALQLSPGTVVLLDETALGPGQVGADGVRNVSALRSLLTLQKVPYEFSYYSMDFDVDHPVVALSGAKSMLGDAFAAHVPVVPAAAP 657
K + + + + + L L GD+LAAE+ LL L+SRV R + + LG L LN+SG P S +R +SALV KC L+P+T ++++ K PKKD A+RL LQLS T +++DET L GQ+ GV+N++AL +L+T QKV Y+F+++S F + V+ LS KS+L F +P+ A+P
Sbjct: 330 KTEVSKIREELLSTLEHILLGDKLAAEFFLLHLISRVYGRADVMPLGKLTLNISGCPNSRYYGGLINRFISALVTKCHLLPLTINNMNS-MKLIPKKDLKANRLESGILQLSDNTHLVIDETVLEAGQLNPQGVKNITALGNLITWQKVEYDFTFHSQQFQTNVNVLILSEGKSLLPSDF--QIPLEKKASP 518
BLAST of mRNA_S-ischiensis_contig8.19610.1 vs. uniprot
Match: A0A067R5U4_ZOONE (Mini-chromosome maintenance complex-binding protein n=1 Tax=Zootermopsis nevadensis TaxID=136037 RepID=A0A067R5U4_ZOONE) HSP 1 Score: 124 bits (312), Expect = 4.250e-29 Identity = 70/162 (43.21%), Postives = 108/162 (66.67%), Query Frame = 1
Query: 130 LAEALGGDRLAAEYALLALLSRVDARTESVALGSLALNLSGVPPSS--SAAFHRAVSALVPKCSLVPVTTDSLSQEYKFAPKKDYDADRLMLSALQLSPGTVVLLDETALGPGQVGADGVRNVSALRSLLTLQKVPYEFSYYSMDFDVDHPVVALSGAKSML 609
L++ L GD LAA+Y + L+S V +E +ALG +LN+S V P + + + ++ LV K +P+T ++L++ F PKKDYD +RL+ LQLS T ++LDET + PGQ+ ++GVRNV+AL +L++ QKV Y+F +Y ++F D PV+ LS KS+L
Sbjct: 294 LSQVLLGDHLAADYFICHLISTVFQHSELLALGKFSLNISSVSPGNGYTTKLYAVLAELVTKSHYLPLTLENLNKS-TFIPKKDYDGNRLVSGILQLSAHTHLVLDETCMEPGQLDSNGVRNVAALGTLISQQKVDYDFQFYKLEFQTDIPVLVLSEGKSLL 454 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19610.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig8.19610.1 >prot_S-ischiensis_contig8.19610.1 ID=prot_S-ischiensis_contig8.19610.1|Name=mRNA_S-ischiensis_contig8.19610.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=247bp LKLPACHPLEVDKDRPQASLYGLQGPLPFKAFMRQAKRQAVDHLAEALGGback to top mRNA from alignment at S-ischiensis_contig8:2530502..2532737- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig8.19610.1 ID=mRNA_S-ischiensis_contig8.19610.1|Name=mRNA_S-ischiensis_contig8.19610.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=2236bp|location=Sequence derived from alignment at S-ischiensis_contig8:2530502..2532737- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig8:2530502..2532737- >mRNA_S-ischiensis_contig8.19610.1 ID=mRNA_S-ischiensis_contig8.19610.1|Name=mRNA_S-ischiensis_contig8.19610.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1482bp|location=Sequence derived from alignment at S-ischiensis_contig8:2530502..2532737- (Schizocladia ischiensis KU_0333)back to top |