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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Ec32 ortholog description | DnaJ domain |
| Ec32 ortholog | Ec-21_006040.2 |
| Hectar predicted targeting category | signal peptide |
| Exons | 1 |
| Model size | 1561 |
| Cds size | 1188 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817267.7135136-UTR-S-ischiensis_contig8:2385011..2385045 | 1622817267.7135136-UTR-S-ischiensis_contig8:2385011..2385045 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig8 2385012..2385045 + |
| 1695740981.6122186-UTR-S-ischiensis_contig8:2385011..2385045 | 1695740981.6122186-UTR-S-ischiensis_contig8:2385011..2385045 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig8 2385012..2385045 + |
| 1622817267.7396724-UTR-S-ischiensis_contig8:2386233..2386572 | 1622817267.7396724-UTR-S-ischiensis_contig8:2386233..2386572 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig8 2386234..2386572 + |
| 1695740981.6396475-UTR-S-ischiensis_contig8:2386233..2386572 | 1695740981.6396475-UTR-S-ischiensis_contig8:2386233..2386572 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig8 2386234..2386572 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817267.7258048-CDS-S-ischiensis_contig8:2385045..2386233 | 1622817267.7258048-CDS-S-ischiensis_contig8:2385045..2386233 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 2385046..2386233 + |
| 1695740981.6249812-CDS-S-ischiensis_contig8:2385045..2386233 | 1695740981.6249812-CDS-S-ischiensis_contig8:2385045..2386233 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 2385046..2386233 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig8.19591.1 >prot_S-ischiensis_contig8.19591.1 ID=prot_S-ischiensis_contig8.19591.1|Name=mRNA_S-ischiensis_contig8.19591.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=396bp
MQLDGMARGFVFGAFALSLLQEGHPFHVPAPIGAAPRTCQRGVHVAPVGM
CAAGTGQMGDSLPPQRKPDGSELLRRRPTGKESRGRGSPSSLPRAIQQPA
EQLAASNEGSAMRSDAFDFGGELFDWGRGVEYTVPTPQFPKLVRQDAATR
PRPARPEAARPYPPSGPRSRPQSDNVVAPPETVPGEEWLRFAPPSPLATG
PPTGSGGDDTMPTLAELVGLPADATFSQLREAYRTAIKMAHPDVSLAEEG
APAAAGLSRAQLLNWAWARLQATEEAKLARGGASRQGRPRGSAPLLPPRA
ASVQAPRPAAGCKARAAPSGAAAASVQALRPEAGRKARAAPAGAAPRSSP
RSAARPAPAGALTTGSSHSKLRRLQDLSKMTPDIGTADDGCTASC* back to topmRNA from alignment at S-ischiensis_contig8:2385012..2386572+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig8.19591.1 ID=mRNA_S-ischiensis_contig8.19591.1|Name=mRNA_S-ischiensis_contig8.19591.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1561bp|location=Sequence derived from alignment at S-ischiensis_contig8:2385012..2386572+ (Schizocladia ischiensis KU_0333)
AGCGGAGCGCCGGGGCGTTGCGGGGGGCGCAAGAATGCAGCTTGACGGGA
TGGCGCGCGGTTTTGTCTTCGGGGCTTTCGCTTTGAGCCTGCTGCAGGAG
GGCCATCCCTTCCACGTTCCGGCTCCAATCGGCGCGGCTCCAAGAACATG
CCAGCGTGGCGTGCATGTGGCGCCAGTGGGCATGTGCGCGGCTGGGACGG
GACAGATGGGGGATAGCCTTCCACCCCAGAGGAAGCCAGATGGGTCGGAA
CTACTCAGGCGGCGACCCACAGGCAAGGAAAGCAGAGGGAGGGGAAGTCC
GTCCTCACTGCCACGTGCGATCCAACAACCGGCCGAGCAGCTGGCGGCGT
CTAACGAGGGGAGCGCCATGCGGTCTGACGCCTTCGACTTTGGCGGAGAG
CTTTTCGACTGGGGTCGGGGGGTGGAGTACACGGTCCCAACGCCCCAGTT
CCCAAAGCTCGTGCGGCAAGACGCGGCAACGCGGCCTCGCCCCGCACGCC
CGGAAGCGGCACGTCCGTATCCGCCCTCGGGGCCGAGGAGCCGGCCACAG
AGCGACAACGTCGTAGCGCCGCCGGAAACGGTCCCTGGCGAGGAATGGCT
CCGGTTCGCCCCGCCCAGCCCTCTCGCCACCGGTCCGCCTACCGGCTCGG
GCGGGGACGATACGATGCCCACGCTGGCAGAGCTCGTGGGGCTGCCGGCC
GACGCCACCTTCAGCCAGCTGCGCGAAGCCTACCGCACCGCCATAAAAAT
GGCCCACCCAGACGTGTCCCTGGCGGAGGAGGGGGCCCCGGCAGCGGCGG
GGCTGTCGCGGGCCCAGCTGCTGAACTGGGCTTGGGCCCGGCTGCAGGCC
ACCGAGGAGGCAAAGCTCGCTCGCGGGGGGGCGTCGCGGCAGGGGCGGCC
ACGGGGCTCGGCGCCGCTGCTGCCGCCGCGGGCAGCAAGTGTTCAGGCCC
CGCGGCCAGCAGCCGGCTGCAAGGCTCGGGCTGCGCCTAGCGGGGCGGCG
GCAGCAAGTGTTCAGGCCCTGCGCCCAGAAGCCGGCCGAAAGGCTCGGGC
TGCGCCTGCTGGGGCGGCGCCGCGTTCCAGCCCGCGGTCGGCGGCGCGCC
CCGCGCCCGCAGGGGCTTTGACAACTGGGAGCTCGCACAGCAAGCTGCGT
CGGCTGCAGGACCTGAGCAAGATGACGCCCGACATTGGCACGGCGGACGA
CGGCTGCACTGCGAGCTGTTGAGGGCCGCCGGGGGCACGGCTGTGTGCCT
GGCGGCAGCCGTGTAATCCACTGTTTGAGGGTGAGGCTGGGCATTTGTCC
TTTGACCGGGGAGTCAGCCTTCTTGTGCTGTCTTGTGCCTGTGCGTGTGT
CAGTGGTGGGAGGCAGTGTCGAGGTGCGATATTGTGCTTCCATGCCTGTG
TGCTCAGGTGCACATGTATGAGTAGCAGTAGCAGTACATACAATGGGATT
TGAGAGGGTGCTTTAGGGCACTTGGAACTGTTGCTTTTCTATACTTTTTA
TTGTGTTCGCCTGTTCTCAACGGCGAAACTTTTAATGTCCAAGTCCTTGG
TTTCCACGCTT back to topCoding sequence (CDS) from alignment at S-ischiensis_contig8:2385012..2386572+ >mRNA_S-ischiensis_contig8.19591.1 ID=mRNA_S-ischiensis_contig8.19591.1|Name=mRNA_S-ischiensis_contig8.19591.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2376bp|location=Sequence derived from alignment at S-ischiensis_contig8:2385012..2386572+ (Schizocladia ischiensis KU_0333)
ATGCAGCTTGACGGGATGGCGCGCGGTTTTGTCTTCGGGGCTTTCGCTTT
GAGCCTGCTGCAGGAGGGCCATCCCTTCCACGTTCCGGCTCCAATCGGCG
CGGCTCCAAGAACATGCCAGCGTGGCGTGCATGTGGCGCCAGTGGGCATG
TGCGCGGCTGGGACGGGACAGATGGGGGATAGCCTTCCACCCCAGAGGAA
GCCAGATGGGTCGGAACTACTCAGGCGGCGACCCACAGGCAAGGAAAGCA
GAGGGAGGGGAAGTCCGTCCTCACTGCCACGTGCGATCCAACAACCGGCC
GAGCAGCTGGCGGCGTCTAACGAGGGGAGCGCCATGCGGTCTGACGCCTT
CGACTTTGGCGGAGAGCTTTTCGACTGGGGTCGGGGGGTGGAGTACACGG
TCCCAACGCCCCAGTTCCCAAAGCTCGTGCGGCAAGACGCGGCAACGCGG
CCTCGCCCCGCACGCCCGGAAGCGGCACGTCCGTATCCGCCCTCGGGGCC
GAGGAGCCGGCCACAGAGCGACAACGTCGTAGCGCCGCCGGAAACGGTCC
CTGGCGAGGAATGGCTCCGGTTCGCCCCGCCCAGCCCTCTCGCCACCGGT
CCGCCTACCGGCTCGGGCGGGGACGATACGATGCCCACGCTGGCAGAGCT
CGTGGGGCTGCCGGCCGACGCCACCTTCAGCCAGCTGCGCGAAGCCTACC
GCACCGCCATAAAAATGGCCCACCCAGACGTGTCCCTGGCGGAGGAGGGG
GCCCCGGCAGCGGCGGGGCTGTCGCGGGCCCAGCTGCTGAACTGGGCTTG
GGCCCGGCTGCAGGCCACCGAGGAGGCAAAGCTCGCTCGCGGGGGGGCGT
CGCGGCAGGGGCGGCCACGGGGCTCGGCGCCGCTGCTGCCGCCGCGGGCA
GCAAGTGTTCAGGCCCCGCGGCCAGCAGCCGGCTGCAAGGCTCGGGCTGC
GCCTAGCGGGGCGGCGGCAGCAAGTGTTCAGGCCCTGCGCCCAGAAGCCG
GCCGAAAGGCTCGGGCTGCGCCTGCTGGGGCGGCGCCGCGTTCCAGCCCG
CGGTCGGCGGCGCGCCCCGCGCCCGCAGGGGCTTTGACAACTGGGAGCTC
GCACAGCAAGCTGCGTCGGCTGCAGGACCTGAGCAAGATGACGCCCGACA
TTGGCACGGCGGACGACGGCTGCACTGCGAGCTGTTGAATGCAGCTTGAC
GGGATGGCGCGCGGTTTTGTCTTCGGGGCTTTCGCTTTGAGCCTGCTGCA
GGAGGGCCATCCCTTCCACGTTCCGGCTCCAATCGGCGCGGCTCCAAGAA
CATGCCAGCGTGGCGTGCATGTGGCGCCAGTGGGCATGTGCGCGGCTGGG
ACGGGACAGATGGGGGATAGCCTTCCACCCCAGAGGAAGCCAGATGGGTC
GGAACTACTCAGGCGGCGACCCACAGGCAAGGAAAGCAGAGGGAGGGGAA
GTCCGTCCTCACTGCCACGTGCGATCCAACAACCGGCCGAGCAGCTGGCG
GCGTCTAACGAGGGGAGCGCCATGCGGTCTGACGCCTTCGACTTTGGCGG
AGAGCTTTTCGACTGGGGTCGGGGGGTGGAGTACACGGTCCCAACGCCCC
AGTTCCCAAAGCTCGTGCGGCAAGACGCGGCAACGCGGCCTCGCCCCGCA
CGCCCGGAAGCGGCACGTCCGTATCCGCCCTCGGGGCCGAGGAGCCGGCC
ACAGAGCGACAACGTCGTAGCGCCGCCGGAAACGGTCCCTGGCGAGGAAT
GGCTCCGGTTCGCCCCGCCCAGCCCTCTCGCCACCGGTCCGCCTACCGGC
TCGGGCGGGGACGATACGATGCCCACGCTGGCAGAGCTCGTGGGGCTGCC
GGCCGACGCCACCTTCAGCCAGCTGCGCGAAGCCTACCGCACCGCCATAA
AAATGGCCCACCCAGACGTGTCCCTGGCGGAGGAGGGGGCCCCGGCAGCG
GCGGGGCTGTCGCGGGCCCAGCTGCTGAACTGGGCTTGGGCCCGGCTGCA
GGCCACCGAGGAGGCAAAGCTCGCTCGCGGGGGGGCGTCGCGGCAGGGGC
GGCCACGGGGCTCGGCGCCGCTGCTGCCGCCGCGGGCAGCAAGTGTTCAG
GCCCCGCGGCCAGCAGCCGGCTGCAAGGCTCGGGCTGCGCCTAGCGGGGC
GGCGGCAGCAAGTGTTCAGGCCCTGCGCCCAGAAGCCGGCCGAAAGGCTC
GGGCTGCGCCTGCTGGGGCGGCGCCGCGTTCCAGCCCGCGGTCGGCGGCG
CGCCCCGCGCCCGCAGGGGCTTTGACAACTGGGAGCTCGCACAGCAAGCT
GCGTCGGCTGCAGGACCTGAGCAAGATGACGCCCGACATTGGCACGGCGG
ACGACGGCTGCACTGCGAGCTGTTGA back to top
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