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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 2398 |
| Cds size | 1341 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817267.6573868-UTR-S-ischiensis_contig8:2358717..2358950 | 1622817267.6573868-UTR-S-ischiensis_contig8:2358717..2358950 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig8 2358718..2358950 + |
| 1695740981.5708845-UTR-S-ischiensis_contig8:2358717..2358950 | 1695740981.5708845-UTR-S-ischiensis_contig8:2358717..2358950 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig8 2358718..2358950 + |
| 1622817267.6815715-UTR-S-ischiensis_contig8:2360291..2361115 | 1622817267.6815715-UTR-S-ischiensis_contig8:2360291..2361115 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig8 2360292..2361115 + |
| 1695740981.6002839-UTR-S-ischiensis_contig8:2360291..2361115 | 1695740981.6002839-UTR-S-ischiensis_contig8:2360291..2361115 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig8 2360292..2361115 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817267.6706047-CDS-S-ischiensis_contig8:2358950..2360291 | 1622817267.6706047-CDS-S-ischiensis_contig8:2358950..2360291 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 2358951..2360291 + |
| 1695740981.585778-CDS-S-ischiensis_contig8:2358950..2360291 | 1695740981.585778-CDS-S-ischiensis_contig8:2358950..2360291 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 2358951..2360291 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig8.19588.1 >prot_S-ischiensis_contig8.19588.1 ID=prot_S-ischiensis_contig8.19588.1|Name=mRNA_S-ischiensis_contig8.19588.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=447bp
MSDTAWPFGRGVDGVDEGPHYRFGGLAYDDDHQPRPSPFPEDISGMSLTM
GWDDPDITYRSVAVLPPPLELGGSVMGELEVGAPEMYIEHGKKFSRAPPS
PGTGHAAHARESVAVVGKEGLGKPAAAELAPEVPPYFGLERTHFVTGMTA
LAAGDLLEELFRTNSIDVQWTGFRLKCSAYVGHRETAFNVSLFRGDGAGP
ASTIIQFQRWDGCSMAFNKLYRSVRQAFKAVAGGSPVQPGDVSAAVAASL
APPPLPHGMMAGRAGARAGAGAGGADGKGEREGNLLDRRSARALAGGMNS
RSEEARRESCRVCAAIAAAPSGSGRALLDDPELAGALEGLLHAEGDPAWL
PAVSAFANLSAWYRELGEGQRAWVRASLAPVVAGLGRHKDPHAQREAARA
LASLSGVLPGQIKSLGGTESLTAAYRSQDVSCRGYASEALKNIEAF* back to topmRNA from alignment at S-ischiensis_contig8:2358718..2361115+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig8.19588.1 ID=mRNA_S-ischiensis_contig8.19588.1|Name=mRNA_S-ischiensis_contig8.19588.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=2398bp|location=Sequence derived from alignment at S-ischiensis_contig8:2358718..2361115+ (Schizocladia ischiensis KU_0333)
CCGGGGGCAGTGACAAGAAGCAACGAAGCACAACGAGTGTCGTCGTGACT
ACCGCTAGGTAAGATGGTGTTCTGTTCCTCTTGCCCGCGGGGTGGGAGAT
GGGGCGCCCGGCTGGCGCGCACCCCGACCCAATCGTAGCCGTGGAGATCG
AGCCTCACTTGCTGCCCCCCCGCTGTGACTTGCCCAGGTCGACACAATAG
GTCGTCCTCCAACTTCAAAGCTGGAACGAAGGAATGTCGGACACTGCGTG
GCCTTTCGGGCGGGGAGTGGATGGTGTCGACGAGGGACCCCACTACCGGT
TTGGCGGTCTCGCGTACGACGACGACCACCAACCGCGCCCGTCGCCCTTT
CCAGAGGACATCTCCGGGATGTCCCTCACGATGGGGTGGGACGACCCCGA
CATCACGTACCGCTCCGTGGCGGTGCTGCCCCCGCCGTTGGAACTTGGGG
GCTCTGTCATGGGAGAGCTGGAGGTGGGGGCCCCGGAAATGTACATAGAG
CACGGGAAGAAGTTCTCTCGCGCGCCACCGAGCCCTGGCACAGGGCACGC
TGCACATGCTCGCGAATCGGTGGCCGTGGTGGGGAAGGAAGGGCTGGGGA
AACCTGCTGCGGCGGAGCTGGCCCCCGAGGTTCCGCCGTACTTTGGCCTA
GAAAGAACACACTTTGTGACGGGAATGACGGCGCTGGCCGCGGGCGACCT
GCTGGAGGAGCTCTTCCGCACCAACTCCATCGATGTCCAGTGGACGGGGT
TCCGGCTGAAATGCTCGGCGTACGTCGGGCACCGGGAGACCGCCTTCAAT
GTCAGCCTCTTCCGGGGCGACGGGGCGGGGCCGGCGAGCACCATAATTCA
GTTCCAGCGATGGGACGGGTGCTCCATGGCCTTTAACAAGCTCTACCGGA
GCGTGCGGCAGGCCTTCAAGGCTGTGGCGGGCGGCAGCCCCGTCCAGCCC
GGAGACGTGTCTGCCGCCGTAGCCGCCTCGCTCGCCCCGCCCCCCCTCCC
GCACGGCATGATGGCGGGCCGGGCCGGGGCCCGGGCCGGGGCCGGGGCCG
GGGGCGCGGACGGGAAAGGGGAAAGGGAAGGGAATCTTCTGGACAGGCGA
TCCGCTCGCGCACTGGCGGGGGGGATGAATTCGCGCTCCGAGGAAGCCCG
CCGGGAAAGCTGTCGGGTGTGCGCGGCCATCGCGGCGGCGCCGTCGGGGT
CCGGCCGGGCCCTCCTGGATGACCCGGAGCTGGCAGGGGCACTCGAGGGG
CTGCTCCACGCTGAGGGCGACCCCGCGTGGCTCCCCGCGGTCTCCGCCTT
CGCGAACCTCTCCGCCTGGTACCGGGAGCTGGGGGAGGGTCAGCGGGCGT
GGGTGCGGGCGTCGTTGGCGCCGGTGGTGGCGGGGCTGGGCCGGCACAAG
GACCCGCACGCGCAAAGGGAGGCGGCGCGGGCCCTGGCCAGCCTGTCAGG
CGTGCTTCCGGGGCAAATAAAGAGCCTGGGTGGGACGGAGAGCCTGACCG
CGGCCTACCGCAGCCAGGACGTGTCCTGCCGGGGCTACGCGTCCGAGGCG
CTGAAGAATATTGAGGCGTTTTGAGTGGGCAGAGGGAGCGGCTGGTGGAG
GAGGGGGAGGAGGAGGAGGAGGAGCGGGGAGGGTGAGGCGACTGGGAGGT
GCCTCGACGGCCTGCACGCCTTGCGTGTGCGCGTTTGCTCCTCCTCCCCC
TTGCCGTCTTCCGACTCCGCCGCCCCCCCTTGTGTTGTCTCTCCCCGTGT
TCGTGAGTGAGACTCCGATGGGGAGTTGGCGGGATGGCGTGATTGCTGTA
CGTTGACCAGCGCCGCTAGTTGTACCTGTGTTGCGGGTCCTCAGTGCATG
GTATCTAGAGCTGGTTGTAAATGTTCCCTGGCCGCCGTCTGTTGTCGTGA
CGGCCGCGCCGTAGAAGAAGGAAGCCTCCTGTCATGTCATGGCATTGGCC
CGTGATAATTATCTTACTACATATTCGTACACACACGATGATGATGAACT
CGTTGCTCTTCGAGCCCGTGACGCGCGGCACCATGTTGCTCTCATGAGTC
TGCAACGGCTGTCTTGTCAAGCTTTTGAGAGGGCAATGCCTGTCTTGTCA
AGATTGCCCCGCAGGCCCAGCCTGTCAAGTGAGGCCGCCTCGTCCCGTGC
CGTCACCTACCAAGTACACGTACAGTTTGTCAAGGCTTGTTCTGATGGGG
ACATGTCAAATCACAAATTTTAGCACTCACATTGCGCCCTCTCCTCGGCT
GTGACGCTGCCGCTGGGCTGTGCCTCGGCGACAAGATGCAGCGACTACTC
GTACTTCCGGAAGTTCAAGTTCTGCCCGAGGGTGGCCCGGGGGGACCAAC
GCGACGCAGCCGCGACCGCCATGCCTACTTAGCCCTTTTACCCCTGAG back to topCoding sequence (CDS) from alignment at S-ischiensis_contig8:2358718..2361115+ >mRNA_S-ischiensis_contig8.19588.1 ID=mRNA_S-ischiensis_contig8.19588.1|Name=mRNA_S-ischiensis_contig8.19588.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2682bp|location=Sequence derived from alignment at S-ischiensis_contig8:2358718..2361115+ (Schizocladia ischiensis KU_0333)
ATGTCGGACACTGCGTGGCCTTTCGGGCGGGGAGTGGATGGTGTCGACGA
GGGACCCCACTACCGGTTTGGCGGTCTCGCGTACGACGACGACCACCAAC
CGCGCCCGTCGCCCTTTCCAGAGGACATCTCCGGGATGTCCCTCACGATG
GGGTGGGACGACCCCGACATCACGTACCGCTCCGTGGCGGTGCTGCCCCC
GCCGTTGGAACTTGGGGGCTCTGTCATGGGAGAGCTGGAGGTGGGGGCCC
CGGAAATGTACATAGAGCACGGGAAGAAGTTCTCTCGCGCGCCACCGAGC
CCTGGCACAGGGCACGCTGCACATGCTCGCGAATCGGTGGCCGTGGTGGG
GAAGGAAGGGCTGGGGAAACCTGCTGCGGCGGAGCTGGCCCCCGAGGTTC
CGCCGTACTTTGGCCTAGAAAGAACACACTTTGTGACGGGAATGACGGCG
CTGGCCGCGGGCGACCTGCTGGAGGAGCTCTTCCGCACCAACTCCATCGA
TGTCCAGTGGACGGGGTTCCGGCTGAAATGCTCGGCGTACGTCGGGCACC
GGGAGACCGCCTTCAATGTCAGCCTCTTCCGGGGCGACGGGGCGGGGCCG
GCGAGCACCATAATTCAGTTCCAGCGATGGGACGGGTGCTCCATGGCCTT
TAACAAGCTCTACCGGAGCGTGCGGCAGGCCTTCAAGGCTGTGGCGGGCG
GCAGCCCCGTCCAGCCCGGAGACGTGTCTGCCGCCGTAGCCGCCTCGCTC
GCCCCGCCCCCCCTCCCGCACGGCATGATGGCGGGCCGGGCCGGGGCCCG
GGCCGGGGCCGGGGCCGGGGGCGCGGACGGGAAAGGGGAAAGGGAAGGGA
ATCTTCTGGACAGGCGATCCGCTCGCGCACTGGCGGGGGGGATGAATTCG
CGCTCCGAGGAAGCCCGCCGGGAAAGCTGTCGGGTGTGCGCGGCCATCGC
GGCGGCGCCGTCGGGGTCCGGCCGGGCCCTCCTGGATGACCCGGAGCTGG
CAGGGGCACTCGAGGGGCTGCTCCACGCTGAGGGCGACCCCGCGTGGCTC
CCCGCGGTCTCCGCCTTCGCGAACCTCTCCGCCTGGTACCGGGAGCTGGG
GGAGGGTCAGCGGGCGTGGGTGCGGGCGTCGTTGGCGCCGGTGGTGGCGG
GGCTGGGCCGGCACAAGGACCCGCACGCGCAAAGGGAGGCGGCGCGGGCC
CTGGCCAGCCTGTCAGGCGTGCTTCCGGGGCAAATAAAGAGCCTGGGTGG
GACGGAGAGCCTGACCGCGGCCTACCGCAGCCAGGACGTGTCCTGCCGGG
GCTACGCGTCCGAGGCGCTGAAGAATATTGAGGCGTTTTGAATGTCGGAC
ACTGCGTGGCCTTTCGGGCGGGGAGTGGATGGTGTCGACGAGGGACCCCA
CTACCGGTTTGGCGGTCTCGCGTACGACGACGACCACCAACCGCGCCCGT
CGCCCTTTCCAGAGGACATCTCCGGGATGTCCCTCACGATGGGGTGGGAC
GACCCCGACATCACGTACCGCTCCGTGGCGGTGCTGCCCCCGCCGTTGGA
ACTTGGGGGCTCTGTCATGGGAGAGCTGGAGGTGGGGGCCCCGGAAATGT
ACATAGAGCACGGGAAGAAGTTCTCTCGCGCGCCACCGAGCCCTGGCACA
GGGCACGCTGCACATGCTCGCGAATCGGTGGCCGTGGTGGGGAAGGAAGG
GCTGGGGAAACCTGCTGCGGCGGAGCTGGCCCCCGAGGTTCCGCCGTACT
TTGGCCTAGAAAGAACACACTTTGTGACGGGAATGACGGCGCTGGCCGCG
GGCGACCTGCTGGAGGAGCTCTTCCGCACCAACTCCATCGATGTCCAGTG
GACGGGGTTCCGGCTGAAATGCTCGGCGTACGTCGGGCACCGGGAGACCG
CCTTCAATGTCAGCCTCTTCCGGGGCGACGGGGCGGGGCCGGCGAGCACC
ATAATTCAGTTCCAGCGATGGGACGGGTGCTCCATGGCCTTTAACAAGCT
CTACCGGAGCGTGCGGCAGGCCTTCAAGGCTGTGGCGGGCGGCAGCCCCG
TCCAGCCCGGAGACGTGTCTGCCGCCGTAGCCGCCTCGCTCGCCCCGCCC
CCCCTCCCGCACGGCATGATGGCGGGCCGGGCCGGGGCCCGGGCCGGGGC
CGGGGCCGGGGGCGCGGACGGGAAAGGGGAAAGGGAAGGGAATCTTCTGG
ACAGGCGATCCGCTCGCGCACTGGCGGGGGGGATGAATTCGCGCTCCGAG
GAAGCCCGCCGGGAAAGCTGTCGGGTGTGCGCGGCCATCGCGGCGGCGCC
GTCGGGGTCCGGCCGGGCCCTCCTGGATGACCCGGAGCTGGCAGGGGCAC
TCGAGGGGCTGCTCCACGCTGAGGGCGACCCCGCGTGGCTCCCCGCGGTC
TCCGCCTTCGCGAACCTCTCCGCCTGGTACCGGGAGCTGGGGGAGGGTCA
GCGGGCGTGGGTGCGGGCGTCGTTGGCGCCGGTGGTGGCGGGGCTGGGCC
GGCACAAGGACCCGCACGCGCAAAGGGAGGCGGCGCGGGCCCTGGCCAGC
CTGTCAGGCGTGCTTCCGGGGCAAATAAAGAGCCTGGGTGGGACGGAGAG
CCTGACCGCGGCCTACCGCAGCCAGGACGTGTCCTGCCGGGGCTACGCGT
CCGAGGCGCTGAAGAATATTGAGGCGTTTTGA back to top
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