mRNA_S-ischiensis_contig8.19582.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig8.19582.1
Unique NamemRNA_S-ischiensis_contig8.19582.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
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BLAST of mRNA_S-ischiensis_contig8.19582.1 vs. uniprot
Match: R7QRR5_CHOCR (Alpha-mannosidase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QRR5_CHOCR)

HSP 1 Score: 280 bits (715), Expect = 2.030e-83
Identity = 139/251 (55.38%), Postives = 175/251 (69.72%), Query Frame = 1 
Query:    1 GRVVPVGGTWVEMDTNIPSGESLVRQFMHGQRFFQSEFGVRCQEFWLPDTFGYSPQLPQLMRGAGIRYFLSQKLSWSLVNKFPRSSFVWEGLDGSQVLAHFPPADTYNSSAMPAEVVKSSTGNKDKEVFSSNMLLYGHGDGGGGPHPDHLESLDRLEQGCPGVPQLVHASPNAFFNALEEEALSHGLGSYAGWRGQGPALQHAVEPVKRVVGELYLELHQGTLTSQAEIKRLNRRCEEALYACEVFVSLSL 753
            GR VPVGG+WVEMD NIPSGESL+RQF+ GQ FFQ  FG+RC+EFWLPDTFGY  QLPQ+MRG GI YFL+QKLSW+L NKFP S+FVWEGLDGSQVLAH PPADTYN+ A P EV++++  NKD  V +S ++L GHGDGGGG  P  LES+ R+     GVP++  ++P  FF  ++ +                   QH    + R VGELY ELH+GT T+QA  K+ NR+CE AL   E+  ++++
Sbjct:  342 GRFVPVGGSWVEMDCNIPSGESLIRQFVVGQAFFQRNFGLRCKEFWLPDTFGYCGQLPQIMRGCGIDYFLTQKLSWNLFNKFPHSTFVWEGLDGSQVLAHMPPADTYNAQAFPEEVMRTANKNKDAAVHNSAIMLVGHGDGGGGASPAMLESMKRMHD-LDGVPKVEFSTPEKFFEGVKSK-------------------QH---DLPRWVGELYFELHRGTYTNQARTKQSNRQCENALRDLELVGTIAV 569
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BLAST of mRNA_S-ischiensis_contig8.19582.1 vs. uniprot
Match: A0A6I9YNW2_9SAUR (alpha-mannosidase 2C1 n=1 Tax=Thamnophis sirtalis TaxID=35019 RepID=A0A6I9YNW2_9SAUR)

HSP 1 Score: 264 bits (674), Expect = 5.750e-83
Identity = 133/251 (52.99%), Postives = 167/251 (66.53%), Query Frame = 1 
Query:    1 GRVVPVGGTWVEMDTNIPSGESLVRQFMHGQRFFQSEFGVRCQEFWLPDTFGYSPQLPQLMRGAGIRYFLSQKLSWSLVNKFPRSSFVWEGLDGSQVLAHFPPADTYNSSAMPAEVVKSSTGNKDKEVFSSNMLLYGHGDGGGGPHPDHLESLDRLEQGCPGVPQLVHASPNAFFNALEEEALSHGLGSYAGWRGQGPALQHAVEPVKRVVGELYLELHQGTLTSQAEIKRLNRRCEEALYACEVFVSLSL 753
            GR VPVGGTWVEMD N+PSGES+VRQF+ GQRFFQ EFG  C EFWLPDTFGYS QLPQ+MRG GIR FL+QKLSW+LVN FP ++F WEGLDGS+VL HFPPAD+Y  S    E++++   NKDK   + ++ L+G GDGGGGP    L+ L R++    G+P++  + P  FF+ALE+E           W                 VGEL+LELH GT T+  +IK+ NR CE  L+  E+  SL+L
Sbjct:   38 GRFVPVGGTWVEMDGNLPSGESMVRQFLQGQRFFQQEFGKLCLEFWLPDTFGYSAQLPQIMRGCGIRRFLTQKLSWNLVNTFPHNTFFWEGLDGSRVLVHFPPADSYGLSGRVDEMLRTVKNNKDKGRVNHSVALFGFGDGGGGPTQKMLDRLQRMKD-TDGLPRVQMSVPEQFFSALEKEKAQ-----LCTW-----------------VGELFLELHNGTYTTHGQIKKGNRECERLLHDIEILSSLAL 265
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BLAST of mRNA_S-ischiensis_contig8.19582.1 vs. uniprot
Match: A0A7R8ZIV0_9CRUS (Hypothetical protein n=1 Tax=Cyprideis torosa TaxID=163714 RepID=A0A7R8ZIV0_9CRUS)

HSP 1 Score: 277 bits (708), Expect = 1.360e-81
Identity = 136/249 (54.62%), Postives = 173/249 (69.48%), Query Frame = 1 
Query:    1 GRVVPVGGTWVEMDTNIPSGESLVRQFMHGQRFFQSEFGVRCQEFWLPDTFGYSPQLPQLMRGAGIRYFLSQKLSWSLVNKFPRSSFVWEGLDGSQVLAHFPPADTYNSSAMPAEVVKSSTGNKDKEVFSSNMLLYGHGDGGGGPHPDHLESLDRLEQGCPGVPQLVHASPNAFFNALEEEALSHGLGSYAGWRGQGPALQHAVEPVKRVVGELYLELHQGTLTSQAEIKRLNRRCEEALYACEVFVSL 747
            GR +PVGGTW+EMD NIPSGES +RQF+HGQ+FF+ EF +RCQEFWLPDTFGYSPQ+PQ++R  G+RYFL+QKLSWSLVNKFP +SF+WEGLDG+QVL+HFPP+++Y        + +     KDK   S++++LYG GDGGGGP  D +E   R+E    G+P+L  ASP+ F+ ++EEE  +        W                 VGELYLELH GT T+QAEIK LNRRCE AL   E  +S+
Sbjct: 2605 GRFIPVGGTWIEMDGNIPSGESFIRQFLHGQKFFEEEFNMRCQEFWLPDTFGYSPQIPQMIRHMGMRYFLTQKLSWSLVNKFPHNSFIWEGLDGTQVLSHFPPSNSYVDQIKIENIQELMKNLKDKGRVSTSVMLYGFGDGGGGPTADMIERSRRVED-VNGLPRLKLASPSEFWASMEEEQKN-----LCTW-----------------VGELYLELHNGTYTTQAEIKSLNRRCEVALREAEALISI 2830
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BLAST of mRNA_S-ischiensis_contig8.19582.1 vs. uniprot
Match: A0A6P4YFM7_BRABE (Alpha-mannosidase n=5 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4YFM7_BRABE)

HSP 1 Score: 275 bits (704), Expect = 1.370e-81
Identity = 138/256 (53.91%), Postives = 175/256 (68.36%), Query Frame = 1 
Query:    1 GRVVPVGGTWVEMDTNIPSGESLVRQFMHGQRFFQSEFGVRCQEFWLPDTFGYSPQLPQLMRGAGIRYFLSQKLSWSLVNKFPRSSFVWEGLDGSQVLAHFPPADTYNSSAMPAEVVKSSTGNKDKEVFSSNMLLYGHGDGGGGPHPDHLESLDRLEQGCPGVPQLVHASPNAFFNALEEEALSHGLGSYAGWRGQGPALQHAVEPVKRVVGELYLELHQGTLTSQAEIKRLNRRCEEALYACEVFVSLSLATALG 768
            G+ +PVGGTWVEMD NIPSGES VRQF+ GQ+FF+ EFG  C+EFWLPDTFGYS QLPQ+M GAGI  FL+QKLSWSLVNKFP   F WEGLDGS+ LAHFPPAD+Y + A   +++K+   +KDK   ++++LLYGHGDGGGGP  D LE L RL     G+P++  +SP+ FF+ +E+E  S+       W                 VGELYLELHQGT T+QA+IK+ NR+CE   +  E+  +L+     G
Sbjct:  479 GQFIPVGGTWVEMDGNIPSGESFVRQFLFGQKFFKKEFGAYCKEFWLPDTFGYSAQLPQIMAGAGIYRFLTQKLSWSLVNKFPHHMFYWEGLDGSRCLAHFPPADSYGTEAKTQDLLKTVKNHKDKGRVNNSVLLYGHGDGGGGPTEDMLERLKRLTD-VDGLPRVAMSSPDKFFSKVEQEESSN----LCTW-----------------VGELYLELHQGTFTTQAQIKKGNRQCEFLFHNIELMATLAWVATRG 712
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BLAST of mRNA_S-ischiensis_contig8.19582.1 vs. uniprot
Match: A0A7L4CRI8_9AVES (MA2C1 mannosidase (Fragment) n=2 Tax=Neognathae TaxID=8825 RepID=A0A7L4CRI8_9AVES)

HSP 1 Score: 263 bits (671), Expect = 1.750e-81
Identity = 131/252 (51.98%), Postives = 167/252 (66.27%), Query Frame = 1 
Query:    1 GRVVPVGGTWVEMDTNIPSGESLVRQFMHGQRFFQSEFGVRCQEFWLPDTFGYSPQLPQLMRGAGIRYFLSQKLSWSLVNKFPRSSFVWEGLDGSQVLAHFPPADTYNSSAMPAEVVKSSTGNKDKEVFSSNMLLYGHGDGGGGPHPDHLESLDRLEQGCPGVPQLVHASPNAFFNALEEEALSHGLGSYAGWRGQGPALQHAVEPVKRVVGELYLELHQGTLTSQAEIKRLNRRCEEALYACEVFVSLSLA 756
            G+ +PVGGTWVEMD N+PSGES+VRQF+ GQRFFQ +FG  C EFWLPDTFGYS QLPQLMRG GIR FL+QKLSW+LVN FP  +F WEG+DGSQVL HFPP D+Y       E++K+   NKDK   + + LL+G GDGGGGP    L+ + R+     G+P++  ++P+  F+ LE+E+          W                 VGEL+LELH GT T+QA+IK+ NR CE  L+  EV  +L+LA
Sbjct:  276 GQFIPVGGTWVEMDGNLPSGESMVRQFLQGQRFFQEQFGRICSEFWLPDTFGYSAQLPQLMRGCGIRRFLTQKLSWNLVNSFPHHTFYWEGIDGSQVLTHFPPGDSYGMHGRVEEMLKTVKNNKDKGRVNHSALLFGFGDGGGGPTQKMLDRMKRMSD-TDGLPRVQFSTPDRLFSVLEKESSQ-----LCTW-----------------VGELFLELHNGTYTTQAQIKKGNRECERILHDVEVLSTLALA 504
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BLAST of mRNA_S-ischiensis_contig8.19582.1 vs. uniprot
Match: A0A0P5AFG8_9CRUS (Alpha-mannosidase n=4 Tax=Daphnia magna TaxID=35525 RepID=A0A0P5AFG8_9CRUS)

HSP 1 Score: 274 bits (700), Expect = 1.910e-81
Identity = 135/252 (53.57%), Postives = 174/252 (69.05%), Query Frame = 1 
Query:    1 GRVVPVGGTWVEMDTNIPSGESLVRQFMHGQRFFQSEFGVRCQEFWLPDTFGYSPQLPQLMRGAGIRYFLSQKLSWSLVNKFPRSSFVWEGLDGSQVLAHFPPADTYNSSAMPAEVVKSSTGNKDKEVFSSNMLLYGHGDGGGGPHPDHLESLDRLEQGCPGVPQLVHASPNAFFNALEEEALSHGLGSYAGWRGQGPALQHAVEPVKRVVGELYLELHQGTLTSQAEIKRLNRRCEEALYACEVFVSLSLA 756
            GR +PVGGTWVEMD NIPSGES +RQF++GQRFF  EFG+R QEFWLPDTFGYS Q PQ++R  GI  FL+QKLSWSLVN+FP  +F+WEGLDGS VL HFPPAD+Y +S   +E +K+     DK   + +++LYG+GDGGGGPH   L+ ++RL+    GVP+L++++PN FF  LE E+                        + R VGELYLELH GT TSQA++K+ NR CE  L   E+ +++SLA
Sbjct:  371 GRFIPVGGTWVEMDGNIPSGESFIRQFLYGQRFFIKEFGMRSQEFWLPDTFGYSAQTPQILRHVGISRFLTQKLSWSLVNRFPHHNFLWEGLDGSTVLVHFPPADSYEASCKVSEALKTERNLLDKGRVTKSIMLYGYGDGGGGPHKPMLDRMERLKD-VDGVPKLMNSTPNKFFENLEAESSQ----------------------LCRWVGELYLELHNGTYTSQADMKKFNRCCEYKLRDAELLLAVSLA 599
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BLAST of mRNA_S-ischiensis_contig8.19582.1 vs. uniprot
Match: A7SSJ0_NEMVE (Alpha-mannosidase n=3 Tax=Nematostella vectensis TaxID=45351 RepID=A7SSJ0_NEMVE)

HSP 1 Score: 273 bits (698), Expect = 1.960e-81
Identity = 138/249 (55.42%), Postives = 171/249 (68.67%), Query Frame = 1 
Query:    1 GRVVPVGGTWVEMDTNIPSGESLVRQFMHGQRFFQSEFGVRCQEFWLPDTFGYSPQLPQLMRGAGIRYFLSQKLSWSLVNKFPRSSFVWEGLDGSQVLAHFPPADTYNSSAMPAEVVKSSTGNKDKEVFSSNMLLYGHGDGGGGPHPDHLESLDRLEQGCPGVPQLVHASPNAFFNALEEEALSHGLGSYAGWRGQGPALQHAVEPVKRVVGELYLELHQGTLTSQAEIKRLNRRCEEALYACEVFVSL 747
            G+ +PVG TWVEMD NIPSGES +RQF+ GQ+FF+ EFG+ C+EFWLPDTFGYS QLPQ++ G GI++FL+QKLSWSL+NKFP SSF W+G+DGS+ L HFPPADTY S     +V+K+S+  KDK     +MLLYGHGDGGGGP  D +E L R+E    G P++  +SP+ FF A+ +   S    S   W                 VGELYLELHQGT T+QAEIK LNRR E  L+  E+  SL
Sbjct:  327 GQFIPVGATWVEMDGNIPSGESFIRQFVVGQQFFKEEFGMMCKEFWLPDTFGYSAQLPQIITGCGIKFFLTQKLSWSLINKFPFSSFFWQGIDGSKCLTHFPPADTYESRGDAKDVLKTSSNLKDKGRVHGSMLLYGHGDGGGGPSEDMIEMLKRMED-VDGCPRVKLSSPHEFFTAVAKRDSS----SLCTW-----------------VGELYLELHQGTFTTQAEIKSLNRRGEFLLHNAELVTSL 553
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BLAST of mRNA_S-ischiensis_contig8.19582.1 vs. uniprot
Match: UPI00077AA047 (alpha-mannosidase 2C1-like n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077AA047)

HSP 1 Score: 266 bits (680), Expect = 4.100e-81
Identity = 133/250 (53.20%), Postives = 168/250 (67.20%), Query Frame = 1 
Query:    1 GRVVPVGGTWVEMDTNIPSGESLVRQFMHGQRFFQSEFGVRCQEFWLPDTFGYSPQLPQLMRGAGIRYFLSQKLSWSLVNKFPRSSFVWEGLDGSQVLAHFPPADTYNSSAMPAEVVKSSTGNKDKEVFSSNMLLYGHGDGGGGPHPDHLESLDRLEQGCPGVPQLVHASPNAFFNALEEEALSHGLGSYAGWRGQGPALQHAVEPVKRVVGELYLELHQGTLTSQAEIKRLNRRCEEALYACEVFVSLS 750
            G+ +PVGGTWVEMD NIP+GES +RQF+ GQ FFQ EFG  C+EFWLPDTFGYS QLPQ++RG G++YFL+ KLSWSL+NKFP  +F WEG+DGS+ LAHFPPADTY S    A+V+K+    KDK    ++MLLYGHGDGGGGP    LE L R+E    G P++  +SP  FF ++E                         E +   VGELYLELHQGT T+QA IK++NR+ E  L+  E+  +L+
Sbjct:  219 GQFIPVGGTWVEMDGNIPNGESFIRQFLVGQNFFQKEFGKVCEEFWLPDTFGYSAQLPQIIRGVGMKYFLTMKLSWSLINKFPFHTFKWEGIDGSRCLAHFPPADTYESRGDAADVLKTVKQLKDKGQVHASMLLYGHGDGGGGPSEKMLEMLQRMED-VDGCPRVKLSSPQNFFTSVESRDA---------------------EKLCTWVGELYLELHQGTYTTQARIKQMNRQSELLLHDAELLAALA 446
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BLAST of mRNA_S-ischiensis_contig8.19582.1 vs. uniprot
Match: A0A670YLY5_PSETE (Alpha-mann_mid domain-containing protein n=2 Tax=Elapidae TaxID=8602 RepID=A0A670YLY5_PSETE)

HSP 1 Score: 265 bits (678), Expect = 4.500e-81
Identity = 132/251 (52.59%), Postives = 169/251 (67.33%), Query Frame = 1 
Query:    1 GRVVPVGGTWVEMDTNIPSGESLVRQFMHGQRFFQSEFGVRCQEFWLPDTFGYSPQLPQLMRGAGIRYFLSQKLSWSLVNKFPRSSFVWEGLDGSQVLAHFPPADTYNSSAMPAEVVKSSTGNKDKEVFSSNMLLYGHGDGGGGPHPDHLESLDRLEQGCPGVPQLVHASPNAFFNALEEEALSHGLGSYAGWRGQGPALQHAVEPVKRVVGELYLELHQGTLTSQAEIKRLNRRCEEALYACEVFVSLSL 753
            GR +PVGGTWVEMD N+PSGES+VRQF+ GQRFFQ EFG  C EFWLPDTFGYS QLPQ+MRG GIR FL+QKLSW+LVN FP ++F WEG+DGSQVL HFPPAD+Y  S    E++++   NKDK   + ++ L+G GDGGGGP    L+ L R++    G+P++  + P+ FF+ALE+E        +  W                 VGEL+LELH GT T+  +IK+ NR CE  L+  E+  SL+L
Sbjct:  330 GRFIPVGGTWVEMDGNLPSGESMVRQFLQGQRFFQQEFGKLCLEFWLPDTFGYSAQLPQIMRGCGIRRFLTQKLSWNLVNTFPHNTFFWEGVDGSQVLVHFPPADSYGLSGHVDEMLRTVKNNKDKGRVNHSVALFGFGDGGGGPTQKMLDRLQRMKD-TDGLPRVQMSVPDQFFSALEKEKAQ-----FCTW-----------------VGELFLELHNGTYTTHGQIKKGNRECERLLHDVEILSSLAL 557
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BLAST of mRNA_S-ischiensis_contig8.19582.1 vs. uniprot
Match: A0A224YHB8_9ACAR (Alpha-mannosidase n=2 Tax=Rhipicephalus TaxID=426455 RepID=A0A224YHB8_9ACAR)

HSP 1 Score: 267 bits (683), Expect = 9.520e-81
Identity = 139/263 (52.85%), Postives = 174/263 (66.16%), Query Frame = 1 
Query:    1 GRVVPVGGTWVEMDTNIPSGESLVRQFMHGQRFFQSEFGVRCQEFWLPDTFGYSPQLPQLMRGAGIRYFLSQKLSWSLVNKFPRSSFVWEGLDGSQVLAHFPPADTYNSSAMPAEVVKSSTGNKDKEVFSSNMLLYGHGDGGGGPHPDHLESLDRLEQGCPGVPQLVHASPNAFFNALEEEA--LSHGLGSYAGWRGQGPALQHAVEPVKRVVGELYLELHQGTLTSQAEIKRLNRRCEEALYACEVFVSLSLATALGAEPSP 783
            G+ +PVGGTWVEMD N+PSGESLVRQF++GQ FF+ EFG RC+EFWLPDTFGYS QLPQ+MR  G+  FL+QKLSW+LVNKFP  +FVWEGLDGS VLAHF P++TY +    AEVVK+ T  +DK   S ++LL+GHGDGGGGP    L    RL Q   G+P++  ++P+AFF+ LE E+  L H       W                  GEL+LELH  T T+ A  K+LNR CE+AL   E+  S++ A A    P P
Sbjct:  326 GQFIPVGGTWVEMDGNLPSGESLVRQFLYGQLFFEKEFGTRCKEFWLPDTFGYSAQLPQIMRICGVSRFLTQKLSWNLVNKFPHHNFVWEGLDGSNVLAHFAPSETYGAELRVAEVVKTVTNLEDKGRVSHSILLFGHGDGGGGPTEAMLRRQSRL-QDVSGLPRVTLSTPDAFFSVLESESRNLCH-------WS-----------------GELFLELHNATYTTHARTKQLNRMCEQALRDAEMIYSVAFALAPDVAPYP 563
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19582.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7QRR5_CHOCR2.030e-8355.38Alpha-mannosidase n=1 Tax=Chondrus crispus TaxID=2... [more]
A0A6I9YNW2_9SAUR5.750e-8352.99alpha-mannosidase 2C1 n=1 Tax=Thamnophis sirtalis ... [more]
A0A7R8ZIV0_9CRUS1.360e-8154.62Hypothetical protein n=1 Tax=Cyprideis torosa TaxI... [more]
A0A6P4YFM7_BRABE1.370e-8153.91Alpha-mannosidase n=5 Tax=Branchiostoma TaxID=7737... [more]
A0A7L4CRI8_9AVES1.750e-8151.98MA2C1 mannosidase (Fragment) n=2 Tax=Neognathae Ta... [more]
A0A0P5AFG8_9CRUS1.910e-8153.57Alpha-mannosidase n=4 Tax=Daphnia magna TaxID=3552... [more]
A7SSJ0_NEMVE1.960e-8155.42Alpha-mannosidase n=3 Tax=Nematostella vectensis T... [more]
UPI00077AA0474.100e-8153.20alpha-mannosidase 2C1-like n=1 Tax=Acropora digiti... [more]
A0A670YLY5_PSETE4.500e-8152.59Alpha-mann_mid domain-containing protein n=2 Tax=E... [more]
A0A224YHB8_9ACAR9.520e-8152.85Alpha-mannosidase n=2 Tax=Rhipicephalus TaxID=4264... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:2315667..2321688 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score274.2
Seed ortholog evalue6.1e-71
Seed eggNOG ortholog45351.EDO33329
Preferred nameMAN2C1
KEGG koko:K01191
KEGG Pathwayko00511,map00511
GOsGO:0003674,GO:0003824,GO:0004553,GO:0004559,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005773,GO:0005783,GO:0005829,GO:0005975,GO:0005996,GO:0006013,GO:0006464,GO:0006517,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009100,GO:0009311,GO:0009313,GO:0009987,GO:0012505,GO:0015923,GO:0016052,GO:0016787,GO:0016798,GO:0019318,GO:0019538,GO:0031974,GO:0031981,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0070013,GO:0071704,GO:1901135,GO:1901564,GO:1901575
EggNOG free text desc.Mannosidase alpha class 2C member 1
EggNOG OGs38EQ8@33154,3BDUC@33208,COG0383@1,KOG4342@2759
EC3.2.1.24
COG Functional cat.G
CAZyGH38
Best tax levelMetazoa
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko04131
Hectar predicted targeting categoryother localisation
Exons7
Model size787
Cds size786
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817290.1571398-CDS-S-ischiensis_contig8:2315667..23157751622817290.1571398-CDS-S-ischiensis_contig8:2315667..2315775Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 2315668..2315775 -
1695740999.7727206-CDS-S-ischiensis_contig8:2315667..23157751695740999.7727206-CDS-S-ischiensis_contig8:2315667..2315775Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 2315668..2315775 -
1622817290.172561-CDS-S-ischiensis_contig8:2316255..23162841622817290.172561-CDS-S-ischiensis_contig8:2316255..2316284Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 2316256..2316284 -
1695740999.7875047-CDS-S-ischiensis_contig8:2316255..23162841695740999.7875047-CDS-S-ischiensis_contig8:2316255..2316284Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 2316256..2316284 -
1622817290.1856186-CDS-S-ischiensis_contig8:2317655..23178301622817290.1856186-CDS-S-ischiensis_contig8:2317655..2317830Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 2317656..2317830 -
1695740999.7993984-CDS-S-ischiensis_contig8:2317655..23178301695740999.7993984-CDS-S-ischiensis_contig8:2317655..2317830Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 2317656..2317830 -
1622817290.197592-CDS-S-ischiensis_contig8:2318141..23182371622817290.197592-CDS-S-ischiensis_contig8:2318141..2318237Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 2318142..2318237 -
1695740999.809717-CDS-S-ischiensis_contig8:2318141..23182371695740999.809717-CDS-S-ischiensis_contig8:2318141..2318237Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 2318142..2318237 -
1622817290.2080753-CDS-S-ischiensis_contig8:2319585..23197441622817290.2080753-CDS-S-ischiensis_contig8:2319585..2319744Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 2319586..2319744 -
1695740999.8214746-CDS-S-ischiensis_contig8:2319585..23197441695740999.8214746-CDS-S-ischiensis_contig8:2319585..2319744Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 2319586..2319744 -
1622817290.2191598-CDS-S-ischiensis_contig8:2320228..23203251622817290.2191598-CDS-S-ischiensis_contig8:2320228..2320325Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 2320229..2320325 -
1695740999.8317838-CDS-S-ischiensis_contig8:2320228..23203251695740999.8317838-CDS-S-ischiensis_contig8:2320228..2320325Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 2320229..2320325 -
1622817290.2303333-CDS-S-ischiensis_contig8:2321566..23216881622817290.2303333-CDS-S-ischiensis_contig8:2321566..2321688Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 2321567..2321688 -
1695740999.8420563-CDS-S-ischiensis_contig8:2321566..23216881695740999.8420563-CDS-S-ischiensis_contig8:2321566..2321688Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 2321567..2321688 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19582.1prot_S-ischiensis_contig8.19582.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig8 2315668..2321688 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig8.19582.1

>prot_S-ischiensis_contig8.19582.1 ID=prot_S-ischiensis_contig8.19582.1|Name=mRNA_S-ischiensis_contig8.19582.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=262bp
GRVVPVGGTWVEMDTNIPSGESLVRQFMHGQRFFQSEFGVRCQEFWLPDT
FGYSPQLPQLMRGAGIRYFLSQKLSWSLVNKFPRSSFVWEGLDGSQVLAH
FPPADTYNSSAMPAEVVKSSTGNKDKEVFSSNMLLYGHGDGGGGPHPDHL
ESLDRLEQGCPGVPQLVHASPNAFFNALEEEALSHGLGSYAGWRGQGPAL
QHAVEPVKRVVGELYLELHQGTLTSQAEIKRLNRRCEEALYACEVFVSLS
LATALGAEPSPP
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mRNA from alignment at S-ischiensis_contig8:2315667..2321688-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig8.19582.1 ID=mRNA_S-ischiensis_contig8.19582.1|Name=mRNA_S-ischiensis_contig8.19582.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=6022bp|location=Sequence derived from alignment at S-ischiensis_contig8:2315667..2321688- (Schizocladia ischiensis KU_0333)
GGGCGGGTGGTCCCCGTGGGGGGCACGTGGGTGGAGATGGATACCAACAT
ACCCTCCGGGGAGAGCCTGGTTCGCCAGTTCATGCACGGCCAGCGCTTCT
TCCAGAGCGAGTTCGGCGTCAGGTGTGTGCGTGCGTGCGTGCGTGCGTGG
TGGGCGCACGCCAGGCCAGTTCATTCACGGCCAGCGCTTCTTCCGGAACG
AGTTCGGCGTCAGGTGTGAGGTTTCTGTCGGAACATCTGTATCCATGATG
TTAGAACGACACGCATGGCCTCTTGTCCCCCATACTTCGAAGTACGAGAC
TCCTTACAGCCCCTTGTAGCACTCTCAGTCTGGGAGATACAGGTGTCATA
TACTGTAGGGCATTTTTCTTAACTTTGTTTTTCGACCCATTTTTTTTTTT
AAGGCCTTTCTTATTTTGGACTCTCTTGAAAGGGCACTTTTGGCCATTTT
TAGGCGAAATCCTTGTACCTCGAAGTGTACCGGCCCTGCGGGAGGATCGC
AGCACGCGAAGACATCACGACGACGTCCCTGCTTCCGCCACCCTGAGCGC
CTGGTGCCCCCTGCAGAGTCTCTACCAGAGAGTCTACATCTTCGCCGATC
TCCTCAGCGTCAAGCCAGTGCTACGCCTGACATCCCAAAGAGCTCGCAGC
CCCTGCATGTAGTGCAGCCAGCCCCGACATGGGAGGCATTTTGCCGTTTC
TAATACCGCGGGCGGTATGAAGCCTTCGGCGTTTCTTAACTTCGGTGCGA
TTTGAAGGCTTCATTTCTTCACAGCTGTTTCTTAGCAGGTGTCTTATACT
GTATCTCTAGCTCCCCTCATTACTCTACACCTTAGGTATTTCTGCTATTT
CTGCCGTTGTCAGCACAGGCCCCCAGCCCTATCACTGCCCTCTCCAACGG
CGCAGATGAACAGCGTGTTACCATGAGACGAGGTACTTTGACAGTTTCAC
GCGTGCGTGCGTGCGTGCGTGGCGGGCACACGCCGGCGGGACATCCCTCC
CCCGCGGGGGTTTGTGCATGTGTGCCCCCTCTCGGGCAGTGGTTGAGTCC
GCCCCCCGGACGGGTTTGAGTGTGTGTGTGTGTATGTGTAGCTGCTGCTG
AGTGAGCGATGAACTGGCCGATTTCGTGCCTTGCATTCGTTGATTCGTTG
GAAATCGCCCGGTACTTTTTTTAATACTTCCTACGATACTGTAGTCTACT
CCGTCTCTGTCGAGGCGCCAAACTCTAGGGGTCTATGCAGGCCGCATGGA
TGCGCCTTGAAACAGGAAGTGCTTCCAAGTACTCGTACCAGTCACACGAG
AGGCAAACGCCCCCCGGCGCCCGCGCCCCACCTCCTCTCGATGGCAATTG
TCGAAATAAAAAGGTGCCAGGAGTTTTGGCTGCCGGACACTTTCGGCTAC
TCTCCCCAGCTGCCGCAGCTCATGCGCGGTGCCGGGATCCGCTACTTCCT
CAGCCAGAAGGTAACTACGAGTACTTAGTGGGACAAATAAATGCCGCGTG
TGCTGTACAGTAGTACTGGTGGAACTCTGCTGTACTGTACTGTACAGTAC
AGTACAGTAGTCGAGTACTTTTTATGCGCAGCGTTTTCGCGCACCCGGAA
GGGCTTGCGGCGCGCCAGGGCCCGGCCGCGCCCATCGGGGGCGCGGCGCT
GGGCGCGCCGGTCCGATGTCGGCATACCTCACCCCCCCTCTGGGCCCCGC
AGGGTGATGCTTGCTACAGTAGTAACGGGGCTCCTGAGCATCATTTCTTG
GGCGTGGTGACGAGCCTTTGTTTTTTTGGGGTGCCGGCGGCGCCCGGCCC
CCTTTTTTCTTGGGCGCGTTTTTTTGGCCCGAGATCGGATTTCTTTTGCG
GTCGCCGCCGTGCCCACTGTGTGAGTCCTTGCCCCGCCGCCGCCCGCGCC
CCTCCCCGCGGCACGGAAAAACGCCACACCTGTCGCGAGGACAGCTGAGC
TGGAGCTTGGTGAACAAGTTCCCGCGGTCGTCGTTTGTGTGGGAAGGCCT
GGACGGGTCGCAGGTGCTGGCGCACTTCCCCCCCGCGGACACATACAACA
GCTCCGCCATGCCCGCGGAGGTGGTCAAGTCCAGCACGGGGAACAAGGAC
AAGGTGTGTGTGTGGGTGTGTGGGTGTGTGCGTGTGCGTGTGTGTGTGTG
CATAGGTGTGCGTGCTTGTATGTGCGTGCGTGTGCGTGTGTTGTGCTTGG
TTGATTTTACCTCGCTTGCCTCGCTTGGCTTTTTTAGAGTGGCCTTGTTG
CTTGGTTGGGCATGTTTTGACCGTTTTACCTCGCTGCTCTTTTCAAAGTG
GCCTGCAAACGGTTGCCTGGAGTGGGGGGTACTACTGTAGTACTTCGAAG
TAGTAGCTGTACTCGTACGCCAGTACAATAGAGAGAAAATAGAGCAACTC
CACGTCACTAACGTCCTCGCCAGCCGTGGTGATGTGACGCGATGTGATGT
GGTGCGTGGAGTACTCTGACATTCCTTTGTGCCCGTCGAGGCAATGAATG
ATGGGTTCACTCTTCCGCTGAGTCCTGTTGTGATGTCGTGCAATGTATGA
TGTGATGTGATGTGATGTCAAAACTACAGTAAATCAGAGCACACATCACA
TCACATCGTATCACATGACGGTACTGTAGCGAGGGAATGAATAATGGGTT
CACTCTTCCGCTGAGTCCTGTTGTGATGTGATGCAATGTGATGTGATGTG
ATGTCAAACTGCAGTACATCAGAGTACACATCACATCGCATCATATCGCA
TGACGCTACTGTAGCAAGGGATTGAATGATGGGTTAACTCTCCCGCTGCG
TCCTGTTTCGGGACGGCCCTTTTGGGTGATCACGGGACCCGGAAGTCGCC
GCTTGTCTGCCAATCAAGGACCCTACTCCACCACTCAATCGAGCACTCAA
TCACACACGTGCGATTGTACCTCGTTACAAATTACTTCGTACATGGTGGC
CACCCCCTCCCACCCTGGCTCTGCCAGGGGAGGGAGGGATCCTGCTCCGT
CTCGAACGAGGCGCGTGGTCAATGGTATCGGGACTACGGCAAGCACCACG
TGAGTACATATACTACGTAGTATATATACATTAATCACGCTACTCTAACA
TTCAGTGGATTGGCATCACATCACATCACATCACATGAGACGACCGCGTG
AGGTGTGGTTGACGTCGCCACTGACCTCGACGCGACACACCTCCTACCTG
TTCTCGTCGGACATGCTCCTCTGACGCAACCACAAACCTCTCTCTCACAC
ACACGCGTGCACGCACACATACACCAGAAACTGCTCTCGTGTGACGTGCT
CCTGTGCGACGCTTGCAACCGCTCACACACACACACACACACACACACAC
ACACACACACACCGGGAAGCGTTTTCTCTCGTCCGACATGACCGACACGC
ACGCACATACGCACGCGCGCACACACACAAACACTCGCACGCGCGCATCA
GGAGGTCTTCTCGTCCAACATGCTGCTCTACGGCCACGGGGATGGCGGGG
GCGGCCCACATCCGGACCACCTTGAGTCCCTCGACCGCCTCGAGCAGGTG
AGTGTCTTCAACGCTTCCTAGGTCTCTGGGTGTCTCTCTCTTTCTCTGTG
CGCTTGTGTGCACGCGTGTGTATGCGTGCGGGGGCGCGTTTGTGTGAGTG
TGTGTTCGTGTTTGTGTGCATGTGTTTGTGTGCGTGTGCGTGTGTGTATG
TGCTAATCCAGACAAACCCCACCCCGCCCACCGACCCCCATCCCTTCCAT
CTTGTCTGTCCGTCCTCCCGCCCGCCCGCCCGCTCTCCCGCCCGCCTTCC
CGCCCAACGGCCCATCTGTCCGTCGTCTGCCCTTTGGCAACAATGAAAAC
AAAACAAGGGCTGCCCGGGGGTCCCCCAGCTGGTGCACGCCTCCCCTAAC
GCCTTCTTCAATGCGTTGGAGGAGGAGGCCCTATCTCACGGCCTGGGGTC
GTATGCCGGGTGGCGGGGGCAGGGCCCGGCGCTGCAGCACGCGGTGGAGC
CCGTCAAGCGGGTGGTGGGGGAACTCTACCTGGGTGAGGGGGGGAGATCA
GTTTTGGAATGTCTAAGCAAATTAACCTATTTATCACAGTAGTGATCTAT
TTTGAGTGGTAGATAAGCGGCGAGTTCCAGGCCCCGTGCCAAAAGGCTCG
TCCCGAAACAGGACTCAACGATCTATATATCTATCTGTAGTCGATATTCG
TTAGTTTGACCAACAAAAAATCCAACTAGTATAGTACTACAGTAGTGTTT
TTTGCAAGAAGGCCAAGTAGTTACTTGGTACAGCCACCTTCGAAATCAGT
TGAGCCCGGTAGCTATCGAATACACGATCCATGATATCTAGTGTTGTTAA
CTGGTGCCGTTTTTTTTACCGGTCGGTACCAGTTAACTGGTTGTTAGACG
GTTAGCCGACCGGTGGCCAATCGTGTAGCCGGAGCGGGTGACATGACCGT
TGTTCGTTGGTTTTGGCAATACTTTAGCGGTTGCCGGCAACCGGTTAAGA
CCGACCGGTCACAAGACCGGTTAAGTTAACAGTTAAACTGATAGGCCTTG
TCAGTTCACAACCCTAGTGAAGGGGGGAGGGGAGGGGAGGGGGCCGGGGG
GGCGGGAAGGGCGGGAGAGGGGCGGGAGGGGGAGATTTGTGCTGCTTGGG
CAGCTGCCCTCCGGTTGCGAAGACCGGGGGGGGGCAGGGGCGCGGTTGCG
GTTGCATTTGGGCTGGACGCCTGTTGTCGATCTCACATGCACACACACAC
ACACACACGTGCAACAGACCTCACAGTCCCCGTGCATGGGGCGAGAGACG
AGAGTGGAAACGATCTGACCCTTTTTTGTGGCCTGCAGTGCCATGTGCAA
GTGCTAGGTTTGTGTAGTTTTGAAGTGTGCACAGTATTACCATACGTGCA
CTATTGGGTTGTACTCGAGCACAGCATGTAGTACTTCTACTTGCTTGTAC
TTCCGGAAGTACTTGGAAGTATTTCGAAGTACATAGCATACTTGAACAGC
AGCATGCGCTTGGAAGTATGTACCTGTGGGCGGTGCGCCCCAAATCGTGC
TACAGGAGCGCCGAGTTAGTTTGGTGACTGACGTCGCCTCCTCCCCGGCC
CCGCCTCCCTGCCCCCTAACCCCCCCCCTTGCCCTTGCCCCACCACATCC
TCTGCACTCCACGGCGGGCTGCCTGCTATGTGTGTGCCGACCTCCCCGCT
TGCTGTGCTTCCGTCCGCGCTTGTCCCCACCTCCTCCTCCTCCTCCTCTT
CCTCCTCCTCCTCCTCCTCCCCCTCCCCCTCCTCCTCCTCCTCCTCCTCC
TCCTCCTCCTCCTCCTCTTTCTCCTCCTCCTCCTCCTTCTCCTTCTTCTC
CTCCTCCTCCTCCCCTTCCCCCACCCTCCTGGGGGCTGGATGGCTCTTTG
GCAGAGCTCCATCAAGGGACGCTGACCTCACAGGTGGGAATAAGCAGCAC
GCACACCGAGGGCTGAACCGTAGACGTTCGTCTAAGCGGTTGCCCAAGTA
CTGTACAGAGTGCTTCCGAGTATGTGCTGTAGGTAGTGCTGTAGCCTACG
GTAGTACTTCCAAGTACCAGCTCTTTGTTTACGAGATCGAACAGACGCAG
GTGTCGCCCAATTGCCGGGCAACGTCTCGGTAAAAACGGCGATTGGCAAA
TGAATCAAGCACGTTTGGGAAGCCAGCCTCGCGACTGACCAAGCACGGTG
AGCTCTGTTACTCCCGGAAGTACTCGTAAATGTTAGCACATACTTGGGAG
CACTTTATGTACAGTGTACGTATGGGAGCGCGTGCGGAGGTGCTGCTTTT
AGTACCAGACCGCACTCGTAGGTCTATTGGCTGCATGCACGCCCATCCAC
CCGTCCATCCACCCACCACCCCACCCGCCCGCCCACCTCACCCTCCCGCC
CCATGCCCCGCAGGCGGAGATCAAACGGCTCAACCGCCGCTGCGAGGAGG
CCCTCTACGCCTGCGAAGTTTTTGTCTCCCTCTCCCTCGCCACCGCCCTT
GGCGCCGAGCCCTCCCCGCCCC
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Coding sequence (CDS) from alignment at S-ischiensis_contig8:2315667..2321688-

>mRNA_S-ischiensis_contig8.19582.1 ID=mRNA_S-ischiensis_contig8.19582.1|Name=mRNA_S-ischiensis_contig8.19582.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1572bp|location=Sequence derived from alignment at S-ischiensis_contig8:2315667..2321688- (Schizocladia ischiensis KU_0333)
GGGCGGGTGGTCCCCGTGGGGGGCACGTGGGTGGAGATGGATACCAACAT
ACCCTCCGGGGAGAGCCTGGTTCGCCAGTTCATGCACGGCCAGCGCTTCT
TCCAGAGCGAGTTCGGCGTCAGGGGCGGGTGGTCCCCGTGGGGGGCACGT
GGGTGGAGATGGATACCAACATACCCTCCGGGGAGAGCCTGGTTCGCCAG
TTCATGCACGGCCAGCGCTTCTTCCAGAGCGAGTTCGGCGTCAGGTGCCA
GGAGTTTTGGCTGCCGGACACTTTCGGCTACTCTCCCCAGCTGCCGCAGC
TCATGCGCGGTGCCGGGATCCGCTACTTCCTCAGCCAGAAGGTGCCAGGA
GTTTTGGCTGCCGGACACTTTCGGCTACTCTCCCCAGCTGCCGCAGCTCA
TGCGCGGTGCCGGGATCCGCTACTTCCTCAGCCAGAAGCTGAGCTGGAGC
TTGGTGAACAAGTTCCCGCGGTCGTCGTTTGTGTGGGAAGGCCTGGACGG
GTCGCAGGTGCTGGCGCACTTCCCCCCCGCGGACACATACAACAGCTCCG
CCATGCCCGCGGAGGTGGTCAAGTCCAGCACGGGGAACAAGGACAAGCTG
AGCTGGAGCTTGGTGAACAAGTTCCCGCGGTCGTCGTTTGTGTGGGAAGG
CCTGGACGGGTCGCAGGTGCTGGCGCACTTCCCCCCCGCGGACACATACA
ACAGCTCCGCCATGCCCGCGGAGGTGGTCAAGTCCAGCACGGGGAACAAG
GACAAGGAGGTCTTCTCGTCCAACATGCTGCTCTACGGCCACGGGGATGG
CGGGGGCGGCCCACATCCGGACCACCTTGAGTCCCTCGACCGCCTCGAGC
AGGAGGTCTTCTCGTCCAACATGCTGCTCTACGGCCACGGGGATGGCGGG
GGCGGCCCACATCCGGACCACCTTGAGTCCCTCGACCGCCTCGAGCAGGG
CTGCCCGGGGGTCCCCCAGCTGGTGCACGCCTCCCCTAACGCCTTCTTCA
ATGCGTTGGAGGAGGAGGCCCTATCTCACGGCCTGGGGTCGTATGCCGGG
TGGCGGGGGCAGGGCCCGGCGCTGCAGCACGCGGTGGAGCCCGTCAAGCG
GGTGGTGGGGGAACTCTACCTGGGGCTGCCCGGGGGTCCCCCAGCTGGTG
CACGCCTCCCCTAACGCCTTCTTCAATGCGTTGGAGGAGGAGGCCCTATC
TCACGGCCTGGGGTCGTATGCCGGGTGGCGGGGGCAGGGCCCGGCGCTGC
AGCACGCGGTGGAGCCCGTCAAGCGGGTGGTGGGGGAACTCTACCTGGAG
CTCCATCAAGGGACGCTGACCTCACAGAGCTCCATCAAGGGACGCTGACC
TCACAGGCGGAGATCAAACGGCTCAACCGCCGCTGCGAGGAGGCCCTCTA
CGCCTGCGAAGTTTTTGTCTCCCTCTCCCTCGCCACCGCCCTTGGCGCCG
AGCCCTCCCCGCCCGCGGAGATCAAACGGCTCAACCGCCGCTGCGAGGAG
GCCCTCTACGCCTGCGAAGTTTTTGTCTCCCTCTCCCTCGCCACCGCCCT
TGGCGCCGAGCCCTCCCCGCCC
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