mRNA_S-ischiensis_contig8.19559.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig8.19559.1 vs. uniprot
Match: A0A6H5KSV9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSV9_9PHAE) HSP 1 Score: 199 bits (507), Expect = 8.590e-57 Identity = 103/138 (74.64%), Postives = 118/138 (85.51%), Query Frame = 1
Query: 10 EAEADAALLNDLAEGDFGADQNIVEVWVVGAEIEPGVLSAGASSFFVVDFYDFESQASPLLGGLEPKFDFATTFKVTVDDLFLKYLGTESLTLELNQTRAADFELVGRAVVRLSPLLSSSQRPRLVLQHERLLSVRDG 423
E E ++ALL++LAEGDF ADQNIVEVWVVGAE+EPGVLSAG+SSF VVDF+DFESQA+PLL G+ P FDFATTFKVTVDD FL++LGTE L LELNQ RAADFELVGR V LS LLSS +PR++LQ E L+S RDG
Sbjct: 139 EQEQESALLSELAEGDFSADQNIVEVWVVGAELEPGVLSAGSSSFIVVDFFDFESQATPLLPGVSPAFDFATTFKVTVDDFFLRFLGTEGLVLELNQARAADFELVGRRQVALSGLLSS--KPRIILQREPLISTRDG 274
BLAST of mRNA_S-ischiensis_contig8.19559.1 vs. uniprot
Match: D8LSF7_ECTSI (C2-C2_1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSF7_ECTSI) HSP 1 Score: 199 bits (507), Expect = 1.270e-56 Identity = 103/138 (74.64%), Postives = 118/138 (85.51%), Query Frame = 1
Query: 10 EAEADAALLNDLAEGDFGADQNIVEVWVVGAEIEPGVLSAGASSFFVVDFYDFESQASPLLGGLEPKFDFATTFKVTVDDLFLKYLGTESLTLELNQTRAADFELVGRAVVRLSPLLSSSQRPRLVLQHERLLSVRDG 423
E E ++ALL++LAEGDF ADQNIVEVWVVGAE+EPGVLSAG+SSF VVDF+DFESQA+PLL G+ P FDFATTFKVTVDD FL++LGTE L LELNQ RAADFELVGR V LS LLSS +PR++LQ E L+S RDG
Sbjct: 588 EQEQESALLSELAEGDFSADQNIVEVWVVGAELEPGVLSAGSSSFIVVDFFDFESQATPLLPGVSPAFDFATTFKVTVDDFFLRFLGTEGLVLELNQARAADFELVGRRQVALSGLLSS--KPRIILQREPLISTRDG 723
BLAST of mRNA_S-ischiensis_contig8.19559.1 vs. uniprot
Match: A0A836CCF4_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCF4_9STRA) HSP 1 Score: 164 bits (416), Expect = 2.330e-44 Identity = 92/164 (56.10%), Postives = 114/164 (69.51%), Query Frame = 1
Query: 1 DEEEAEADAALLNDLAEGDFGADQNIVEVWVVGAEIEPGVLSAGASSFFVVDFYDFESQASPLLGGLEPKFDFATTFKVTVDDLFL--------------------------KYLGTESLTLELNQTRAADFELVGRAVVRLSPLLSSSQRPRLVLQHERLLSV 414
D +A A+ LL +LA+GDFG DQN+VEVWVVGA+++ GV++A ASSF V+DF+D+ESQA+PLL G EP+FDFATT+KVTVDDLFL +YL TE LTLELNQTRAADF+LV R + LS LLS+ +PRLVL E L+SV
Sbjct: 688 DGSDAAAEETLLAELADGDFGPDQNVVEVWVVGAQLKEGVIAANASSFAVLDFFDYESQATPLLAGREPRFDFATTYKVTVDDLFLSIEWHDGYSCXXXXXXXXXXXXXXXXRYLATEGLTLELNQTRAADFDLVARCKIALSSLLST--KPRLVLNGEPLVSV 849
BLAST of mRNA_S-ischiensis_contig8.19559.1 vs. uniprot
Match: A0A7S1TSY9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TSY9_9STRA) HSP 1 Score: 141 bits (356), Expect = 2.670e-36 Identity = 76/142 (53.52%), Postives = 101/142 (71.13%), Query Frame = 1
Query: 1 DEEEAEADAALLNDLAEGDFGADQNIVEVWVVGAEIEPGVLSAGASSFFVVDFYDFESQASPLLGGLEPKFDFATTFKVTVDDLFLKYLGTESLTLELNQT-RAADFELVGRAVVRLSPLLSSSQRPRLVLQHERLLSVRDG 423
DE E+ A+ A DLA D G D+NIVEVW+ E++ G L G+++F +VDFYDFES A+P++ GL P FDFATT+KV++DD FL+YL TE+L +ELN T R ADF+++ RA + L +L + RP LVL HE L SVR G
Sbjct: 369 DEAESVAETAYAADLA-ADIGPDENIVEVWIRKVELKDGALEEGSNTFCIVDFYDFESVATPIMAGLTPGFDFATTYKVSLDDFFLRYLATENLAVELNLTKRGADFDILARAQIPLGSMLEA-YRPVLVLTHEPLYSVRSG 508
BLAST of mRNA_S-ischiensis_contig8.19559.1 vs. uniprot
Match: A0A7S3ZSY2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZSY2_9STRA) HSP 1 Score: 136 bits (342), Expect = 2.140e-34 Identity = 70/139 (50.36%), Postives = 101/139 (72.66%), Query Frame = 1
Query: 7 EEAEADAALLNDLAEGDFGADQNIVEVWVVGAEIEPGVLSAGASSFFVVDFYDFESQASPLLGGLEPKFDFATTFKVTVDDLFLKYLGTESLTLELNQTRAADFELVGRAVVRLSPLLSSSQRPRLVLQHERLLSVRDG 423
E E+ LL +L +GD D+N+VEVWVV A ++ GV+S AS+F VVDF +ESQA+ L G +P+FDFAT++KV+VDDLFL+YL TESL+LE+ + + AD+EL+ +A + L+PLL S +P L+L + L++ R G
Sbjct: 543 ETTESTNLLLAELQDGDLQPDENLVEVWVVSASLDEGVVSPNASTFAVVDFLTYESQATQWLPGSKPEFDFATSYKVSVDDLFLRYLATESLSLEICEAQQADYELLAKASIPLAPLLDS--KPTLILDKQPLIAARTG 679
BLAST of mRNA_S-ischiensis_contig8.19559.1 vs. uniprot
Match: A0A7S3ZSY1_9STRA (Hypothetical protein (Fragment) n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZSY1_9STRA) HSP 1 Score: 136 bits (342), Expect = 2.140e-34 Identity = 70/139 (50.36%), Postives = 101/139 (72.66%), Query Frame = 1
Query: 7 EEAEADAALLNDLAEGDFGADQNIVEVWVVGAEIEPGVLSAGASSFFVVDFYDFESQASPLLGGLEPKFDFATTFKVTVDDLFLKYLGTESLTLELNQTRAADFELVGRAVVRLSPLLSSSQRPRLVLQHERLLSVRDG 423
E E+ LL +L +GD D+N+VEVWVV A ++ GV+S AS+F VVDF +ESQA+ L G +P+FDFAT++KV+VDDLFL+YL TESL+LE+ + + AD+EL+ +A + L+PLL S +P L+L + L++ R G
Sbjct: 543 ETTESTNLLLAELQDGDLQPDENLVEVWVVSASLDEGVVSPNASTFAVVDFLTYESQATQWLPGSKPEFDFATSYKVSVDDLFLRYLATESLSLEICEAQQADYELLAKASIPLAPLLDS--KPTLILDKQPLIAARTG 679
BLAST of mRNA_S-ischiensis_contig8.19559.1 vs. uniprot
Match: A0A7S3XN98_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XN98_HETAK) HSP 1 Score: 120 bits (300), Expect = 4.920e-31 Identity = 66/112 (58.93%), Postives = 80/112 (71.43%), Query Frame = 1
Query: 100 AEIEPGVLSAGAS----SFFVVDFYDFESQASPLLGGLEPKFDFATTFKVTVDDLFLKYLGTESLTLELNQTRAADFELVGRAVVRLSPLLSSSQRPRLVLQHERLLSVRDG 423
AE++ G L A +F +VDF+D+ESQA+PLL G PKFDFATT+KV VDD FL++L E LTLELN+ + ADFEL+ R V L LLSS RPRLVL+ E L SVRDG
Sbjct: 1 AELKAGALGGAADDDACTFVLVDFFDYESQATPLLRGARPKFDFATTYKVHVDDFFLRFLALEPLTLELNRNKGADFELLARCSVPLGGLLSS--RPRLVLEREPLYSVRDG 110
BLAST of mRNA_S-ischiensis_contig8.19559.1 vs. uniprot
Match: A0A7S2S466_9STRA (Hypothetical protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2S466_9STRA) HSP 1 Score: 121 bits (304), Expect = 2.080e-29 Identity = 55/123 (44.72%), Postives = 87/123 (70.73%), Query Frame = 1
Query: 55 DFGADQNIVEVWVVGAEIEPGVLSAGASSFFVVDFYDFESQASPLLGGLEPKFDFATTFKVTVDDLFLKYLGTESLTLELNQTRAADFELVGRAVVRLSPLLSSSQRPRLVLQHERLLSVRDG 423
DFG +N++E+WV+GA + + G ++F ++DFYD+E+Q SPLL GL PK++FA T+++ VD FL+YL +E+LTLELN+T+ AD+EL+G+ + + LL SS + + ++S RDG
Sbjct: 363 DFGPGENLIEIWVMGASLNENKVEPGVTTFVMLDFYDYETQTSPLLSGLHPKYNFAATYRIKVDHFFLRYLASETLTLELNRTKHADYELLGQCTLSMRSLLESSGKFKC--DEAEIISSRDG 483
BLAST of mRNA_S-ischiensis_contig8.19559.1 vs. uniprot
Match: A0A2R5G9Z1_9STRA (Protein fantom n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G9Z1_9STRA) HSP 1 Score: 117 bits (294), Expect = 6.250e-28 Identity = 54/123 (43.90%), Postives = 87/123 (70.73%), Query Frame = 1
Query: 55 DFGADQNIVEVWVVGAEIEPGVLSAGASSFFVVDFYDFESQASPLLGGLEPKFDFATTFKVTVDDLFLKYLGTESLTLELNQTRAADFELVGRAVVRLSPLLSSSQRPRLVLQHERLLSVRDG 423
DFG +N++E+W+ A+++ L A++F ++DFYD+E+Q SPL+ GL P F+FA T++V VD L+Y+ +++LTLELN+TR DFEL+G+ + L PLL S + ++ +++SVRDG
Sbjct: 582 DFGPGENLIEIWIKDAKLDETKLEQAATTFVMLDFYDYETQTSPLVSGLTPNFNFAATYRVAVDHFLLRYMASDTLTLELNRTRHGDFELLGQTALSLRPLLHGSGKWQV--DDAQIISVRDG 702
BLAST of mRNA_S-ischiensis_contig8.19559.1 vs. uniprot
Match: A0A1V9YGY3_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YGY3_9STRA) HSP 1 Score: 108 bits (271), Expect = 7.790e-25 Identity = 56/118 (47.46%), Postives = 80/118 (67.80%), Query Frame = 1
Query: 13 AEADAALLNDLAEGDFGADQNIVEVWVVGAEIEPGVLSAGASSFFVVDFYDFESQASPLLGGLEPKFDFATTFKVTVDDLFLKYLGTESLTLELNQTRAADFELVGRAVVRLSPLLSS 366
A+A+ ALL D +N++EVWVV A EP + + +F + DF+DFESQ + LL G +P ++FAT++K+T D FL+YL +E LTLE++Q F +VG+AVVRLSPLL+S
Sbjct: 607 ADAEPALL--AGAEDLEPGENLLEVWVVSAHFEPKYVHGSSCTFVLCDFFDFESQTTALLPGGDPVYNFATSYKITADAFFLRYLASEQLTLEVHQALKGAFHVVGKAVVRLSPLLAS 722 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19559.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig8.19559.1 >prot_S-ischiensis_contig8.19559.1 ID=prot_S-ischiensis_contig8.19559.1|Name=mRNA_S-ischiensis_contig8.19559.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=141bp DEEEAEADAALLNDLAEGDFGADQNIVEVWVVGAEIEPGVLSAGASSFFVback to top mRNA from alignment at S-ischiensis_contig8:2198071..2199410+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig8.19559.1 ID=mRNA_S-ischiensis_contig8.19559.1|Name=mRNA_S-ischiensis_contig8.19559.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1340bp|location=Sequence derived from alignment at S-ischiensis_contig8:2198071..2199410+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig8:2198071..2199410+ >mRNA_S-ischiensis_contig8.19559.1 ID=mRNA_S-ischiensis_contig8.19559.1|Name=mRNA_S-ischiensis_contig8.19559.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=846bp|location=Sequence derived from alignment at S-ischiensis_contig8:2198071..2199410+ (Schizocladia ischiensis KU_0333)back to top |