mRNA_S-ischiensis_contig8.19554.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig8.19554.1
Unique NamemRNA_S-ischiensis_contig8.19554.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
BLAST of mRNA_S-ischiensis_contig8.19554.1 vs. uniprot
Match: D7FRA6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRA6_ECTSI)

HSP 1 Score: 706 bits (1822), Expect = 3.840e-247
Identity = 362/532 (68.05%), Postives = 425/532 (79.89%), Query Frame = 1
Query:  154 MTTFWKPGQVAPGLALERGDEAAPLH--DRRLSHLPLTQQRQALPVYRHRRSILYAVEKYRTVVLVGETGSGKTTQIPQYLHEAGWTKGDRTVACTQPRRIAAVTVAARVAQEMGCQLGAEVGYAVRFDAKCGPRTKLKFCTDGMLMREMMLDPLLSGYSAVMLDEAHERTIYNDVLFGLLKKVMRKRPDLRVIVASATLDPEQFRDFFETNRSKDRSRDTATVMSIQGRQHGVDVLYLERPAPNYIEAAVEAALSLHATQGPGDILVFLPGAEEIDAAVEMIRERAPPP-------GRGQGRARGQGGAAPLQALPLYSALPVSAQMRVFEPAEGEVRRCVFATSVAETSVTIEGVRYVVDPGLARLPWYDPATGLGALLTTHASRASARQRAGRAGRVAPGKCLRLMTEGDYFRALPEFTVPEMQRTELSWVVLLLKALGIDNVLRFEFLSAPAAGAMARALELLYALGALDEEGRLTDPVGQAMAELPVEPRLAKLLVSSWGFGCVEEAVTLAGVLSVRNPFVDPSQAG 1722
            M+ FWKPG   PG  LERGD +  LH  D +LS LPL  QR ALP+YRHR S+L+AV+K+R +VLVGETG GKTTQIPQYLHEAGWT G+R V CTQPRR+AA TVA RVA+EMG +LG  VGY+VRFD++ GP TK+KFCTDGML+REMMLDPLL+ YS VMLDEAHERTIYND+LFGLLKK+MRKR +LRVIVASATLD EQFRDFFETN        TAT++SIQGRQH VDVLY E+P  NY+ AAV+AAL++H+++  GD+L+FLPGAEEIDAAVEM+R+ AP         G G   A+G G   PLQ LP YSALP++ QM+VFEP    VRR V AT++AETSVTI+ +RYV+DPG  RLP+YDPA G GALLTT  S+ASA+QRAGRAGRV+PGKCLRLMTE DY   LP  T+PEMQR++LSWVVLLLKALGID++L FEFLS PAA  M RALELLYALGALD+  RLT+P+G  MAE PVEP LAK L S+W FGCVE+A+T+A +LSV+NPFV P   G
Sbjct:    1 MSVFWKPGTSGPG-GLERGDGSESLHIVDPKLSKLPLQTQRHALPIYRHRNSVLFAVQKHRAIVLVGETGCGKTTQIPQYLHEAGWTAGNRAVVCTQPRRVAAFTVATRVAEEMGSRLGETVGYSVRFDSRVGPATKVKFCTDGMLLREMMLDPLLTAYSVVMLDEAHERTIYNDILFGLLKKIMRKRKELRVIVASATLDAEQFRDFFETNTXXXXXXXTATILSIQGRQHPVDVLYTEKPVSNYVRAAVDAALAVHSSEPVGDVLIFLPGAEEIDAAVEMLRDHAPQSATSGKWGGWGGSTAKGVGEGGPLQVLPFYSALPINTQMKVFEPTRQGVRRIVVATTIAETSVTIDRIRYVIDPGFIRLPFYDPAQGFGALLTTLTSKASAKQRAGRAGRVSPGKCLRLMTEEDYHAQLPAQTIPEMQRSDLSWVVLLLKALGIDDILHFEFLSPPAAETMIRALELLYALGALDDSCRLTEPLGMTMAEFPVEPCLAKFLASAWDFGCVEDALTVAAMLSVQNPFVHPRGGG 531          
BLAST of mRNA_S-ischiensis_contig8.19554.1 vs. uniprot
Match: A0A835Z495_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z495_9STRA)

HSP 1 Score: 600 bits (1547), Expect = 1.790e-206
Identity = 318/525 (60.57%), Postives = 391/525 (74.48%), Query Frame = 1
Query:  163 FWKPGQVAPGLALERGDEA-AP-LHDRRLSHLPLTQQRQALPVYRHRRSILYAVEKYRTVVLVGETGSGKTTQIPQYLHEAGWTKGDRTVACTQPRRIAAVTVAARVAQEMGCQLGAEVGYAVRFDAKCGP---RTKLKFCTDGMLMREMMLDPLLSGYSAVMLDEAHERTIYNDVLFGLLKKVMRKRPDLRVIVASATLDPEQFRDFFETNRSKDRSRDTATVMSIQGRQHGVDVLYLERPAPNYIEAAVEAALSLHATQGPGDILVFLPGAEEIDAAVEMIRERAPPPGRGQGRARGQGGAAPLQALPLYSALPVSAQMRVFEPAEGEVRRCVFATSVAETSVTIEGVRYVVDPGLARLPWYDPATGLGALLTTHASRASARQRAGRAGRVAPGKCLRLMTEGDYFRALPEFTVPEMQRTELSWVVLLLKALGIDNVLRFEFLSAPAAGAMARALELLYALGALDEEGRLTDPVGQAMAELPVEPRLAKLLVSSWGFGCVEEAVTLAGVLSVRNPFVDPSQAG 1722
            FWKPG   PG   ERG +A AP L D +LSHLPL++QRQALP+Y++ RS+LYA+E +RT+V+VGETGSGKTTQ+PQYLH+AGWT G R V CTQPRR+AAVTVAARVAQEM         YAVRFD KC     RT LKF TDG+L+REMMLDPLLS YS VMLDEAHERT++ND+LFGLLKKVMR+R DLR+IVASATLD E+FRDFFET   K+  + TAT++S+QGRQH VD+LYLE PA NY+ AA EAALS+H T+ PGDIL+F+PGAEEID                                          QM VFEPA+  +R+ + AT+VAETS+T++GV+YVVDP   RLP+YDPATG+ +L+TT  S+ASA QRAGRAGR +PGKCLRL+TE D+   LP  T PE+QRT+LS  +LLLKALG+ +++RF+FLS P A A+ARALELLY+LGA+D+   +T P+G +MAELP+ P+LAK+LV+SW FGCV EA+T+A +LSVR PF  P   G
Sbjct:    3 FWKPGTAGPGFVQERGGDAEAPVLVDPKLSHLPLSKQRQALPIYQYHRSLLYALETHRTLVIVGETGSGKTTQVPQYLHQAGWTAGGRAVVCTQPRRVAAVTVAARVAQEMXXXXXXXXXYAVRFDEKCSKEVGRTALKFVTDGLLIREMMLDPLLSRYSVVMLDEAHERTVHNDILFGLLKKVMRQRSDLRLIVASATLDAEEFRDFFET-ADKEGDKLTATILSVQGRQHPVDILYLEAPADNYVRAAAEAALSIHETEPPGDILIFMPGAEEIDTV----------------------------------------QMAVFEPAKPGIRKVIVATNVAETSITLDGVKYVVDPCFVRLPFYDPATGVESLVTTVTSKASATQRAGRAGRTSPGKCLRLVTETDFNSLLPARTPPEVQRTDLSGTLLLLKALGLHDIVRFDFLSPPTAEALARALELLYSLGAIDDSADITRPLGASMAELPLSPQLAKVLVASWRFGCVAEALTVAAMLSVRGPFERPRGVG 486          
BLAST of mRNA_S-ischiensis_contig8.19554.1 vs. uniprot
Match: L8GZI0_ACACA (PremRNA splicing factor, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GZI0_ACACA)

HSP 1 Score: 545 bits (1405), Expect = 1.680e-184
Identity = 294/530 (55.47%), Postives = 380/530 (71.70%), Query Frame = 1
Query:  163 FWKPGQVAP----GLALERGDEAAPLHDRRL-----SHLPLTQQRQALPVYRHRRSILYAVEKYRTVVLVGETGSGKTTQIPQYLHEAGWTKGDRTVACTQPRRIAAVTVAARVAQEMGCQLGAEVGYAVRFDAKC-GPRTKLKFCTDGMLMREMMLDPLLSGYSAVM----LDEAHERTIYNDVLFGLLKKVMRKRPDLRVIVASATLDPEQFRDFFETNRSKDRSRDTATVMSIQGRQHGVDVLYLERPAPNYIEAAVEAALSLHATQGPGDILVFLPGAEEIDAAVEMIRERAPPPGRGQGRARGQGGAAPLQALPLYSALPVSAQMRVFEPAEGEVRRCVFATSVAETSVTIEGVRYVVDPGLARLPWYDPATGLGALLTTHASRASARQRAGRAGRVAPGKCLRLMTEGDYFRALPEFTVPEMQRTELSWVVLLLKALGIDNVLRFEFLSAPAAGAMARALELLYALGALDEEGRLTDPVGQAMAELPVEPRLAKLLVSSWGFGCVEEAVTLAGVLSVRNPFVDP 1710
            FWKPG VAP    G+   + D      D  +       L L+QQRQ LP++++R  ILY VEKY+TVV+VG TGSGKTTQIPQYLHEAGWT+G R VACTQPRR+AA TVA RVAQEMG  LG EVGYA+RFD K    +TK+KF TDG+L+RE MLDPLLS YS ++    LDEAHER+I+ D+L GLLKK+ RKRP+LR+IV+SATL+ ++  DFF TN++ D + DTA ++SI+GRQ  VD+ YL++P  NY+ AA++  +++H T+ PGD+LVFL G+EE+D  VE+IR+RA     G  +    G    L  LP+YS LP + QM+VF+     VR+ + AT++AETS+TI+GV YVVD G  ++  Y+PAT + AL+    ++A A QRAGR+GR  PGKC RL TE  Y RA+   T+PEMQRT+L+ V+L LKALGIDNVLRFEF + P +  M RALELLYALGALDE G+LT P+G  +AELPV P L K+L+ S   GC EE +++A +LSV+  FV P
Sbjct:   13 FWKPGAVAPEGLCGIGTGQFDRETEKEDLFVVFNANEKLSLSQQRQRLPIFKNRTHILYLVEKYQTVVIVGSTGSGKTTQIPQYLHEAGWTQGGRVVACTQPRRVAATTVAERVAQEMGSLLGEEVGYAIRFDNKTEAEKTKIKFMTDGLLLRETMLDPLLSKYSVIIASPRLDEAHERSIHTDILMGLLKKIQRKRPELRLIVSSATLEAQKLADFFNTNKTTDPANDTAAILSIEGRQFPVDIFYLKQPTDNYVHAAIDTVINIHKTEPPGDVLVFLTGSEEVDDTVELIRQRAAEIRPGDLK---PGSPRSLSVLPIYSGLPGAQQMKVFQTMPKHVRKVIVATNIAETSITIDGVVYVVDSGFVKIKAYNPATAMEALVVVPVAQAGADQRAGRSGRQRPGKCYRLYTEAAY-RAMRVNTIPEMQRTDLAPVLLQLKALGIDNVLRFEFPTPPPSQCMMRALELLYALGALDEYGKLTQPIGYTLAELPVGPTLGKMLLKSGELGCSEEVLSIAAMLSVQMVFVYP 538          
BLAST of mRNA_S-ischiensis_contig8.19554.1 vs. uniprot
Match: W7TSM4_9STRA (Deah (Asp-glu-ala-his) box polypeptide 35 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSM4_9STRA)

HSP 1 Score: 541 bits (1393), Expect = 9.250e-183
Identity = 292/536 (54.48%), Postives = 378/536 (70.52%), Query Frame = 1
Query:  163 FWKPGQVAPGLALER---------GDEAAPLHDRRLSHLPLTQQRQALPVYRHRRSILYAVEKYRTVVLVGETGSGKTTQIPQYLHEAGWTKGDRTVACTQPRRIAAVTVAARVAQEMGCQLGAEVGYAVRFDAKC---GPRTKLKFCTDGMLMREMMLDPLLSGYSAVMLDEAHERTIYNDVLFGLLKKVMRKRPDLRVIVASATLDPEQFRDFFET-------NRSKDRSRDTATVMSIQGRQHGVDVLYLERPAPNYIEAAVEAALSLHATQGPGDILVFLPGAEEIDAAVEMIRERAPPPGRGQGRARGQGGAAPLQALPLYSALPVSAQMRVFEPAEGEV-RRCVFATSVAETSVTIEGVRYVVDPGLARLPWYDPATGLGALLTTHASRASARQRAGRAGRVAPGKCLRLMTEGDYFRALPEFTVPEMQRTELSWVVLLLKALGIDNVLRFEFLSAPAAGAMARALELLYALGALDEEGRLTDPVGQAMAELPVEPRLAKLLVSSWGFGCVEEAVTLAGVLSVRNPFVDP 1710
            FWKPG  AP L LER         GD        RL   P  QQ+  LP+ R R +ILYA+E+Y+TVVLVGETGSGK+TQ+PQYLHE+GWT+GDR V CTQPRR+AA+TVAARVA+EMGC+LG  VGYAVRFD++    G RT++KF TDG+L+RE + DPLLS YS ++LDEAHER++Y DVL GLLKKV ++RP+LR++++SAT D E FRDFFET       +   + S   +T++SI GRQH VDV YL +   NY+ +AV+  LS+  ++G GD+LVFLPG EEID AV  ++E     G         G    +  LPL+S+LP   QM+  +P    V R+ +FAT++AETS+TIEG+R++VD G  +LP YD  TG  +L+TT  SRASA QRAGRAGR  PGKC RL TE + F  L   T PE+QR+ L+W++L LKALGID V+ F+F++ P+A A+ R LELLYALGALD+  RLT  +G+ MAE PVEPRLAKLL++S+ F C EEA+TL  +L V+N + +P
Sbjct:    3 FWKPGTAAPQLGLERPTGLSETEAGDTIGYNPHYRL---PFKQQKLLLPIARARENILYALERYKTVVLVGETGSGKSTQVPQYLHESGWTQGDRVVLCTQPRRVAAITVAARVAEEMGCKLGGIVGYAVRFDSRVDEGGSRTRIKFVTDGLLLRETLYDPLLSAYSVIILDEAHERSMYTDVLLGLLKKVRKRRPELRIMISSATADAETFRDFFETFTYKGVSSEQSEGSNHDSTIVSITGRQHAVDVFYLSKAPRNYLRSAVDTVLSIIESEGRGDVLVFLPGMEEIDEAVVTVKEHLNALG---------GMENVVLVLPLHSSLPHHLQMKALQPPSRHVERKVIFATNIAETSLTIEGIRFIVDCGFVKLPVYDVRTGFESLVTTSVSRASATQRAGRAGRTGPGKCFRLYTE-EAFSTLSAHTTPEVQRSNLAWMILQLKALGIDQVMTFDFIAQPSAEALMRGLELLYALGALDDRCRLTPDLGEKMAEFPVEPRLAKLLLASFDFHCTEEALTLVALLQVQNVWTNP 525          
BLAST of mRNA_S-ischiensis_contig8.19554.1 vs. uniprot
Match: A0A0L0HH03_SPIPD (Uncharacterized protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HH03_SPIPD)

HSP 1 Score: 537 bits (1384), Expect = 8.880e-182
Identity = 285/523 (54.49%), Postives = 371/523 (70.94%), Query Frame = 1
Query:  163 FWKPGQVAPGLALERG-----DEAAPLHDRRLSHLPLTQQRQALPVYRHRRSILYAVEKYRTVVLVGETGSGKTTQIPQYLHEAGWTKGDRTVACTQPRRIAAVTVAARVAQEMGCQLGAEVGYAVRFD-AKCGPRTKLKFCTDGMLMREMMLDPLLSGYSAVMLDEAHERTIYNDVLFGLLKKVMRKRPDLRVIVASATLDPEQFRDFFETNRSKDRSRDTATVMSIQGRQHGVDVLYLERPAPNYIEAAVEAALSLHATQGPGDILVFLPGAEEIDAAVEMIRERAPPPGRGQGRARGQGGAAPLQALPLYSALPVSAQMRVFEPAEGEVRRCVFATSVAETSVTIEGVRYVVDPGLARLPWYDPATGLGALLTTHASRASARQRAGRAGRVAPGKCLRLMTEGDYFRALPEFTVPEMQRTELSWVVLLLKALGIDNVLRFEFLSAPAAGAMARALELLYALGALDEEGRLTDPVGQAMAELPVEPRLAKLLVSSWGFGCVEEAVTLAGVLSVRNPFVDPS 1713
            FWKPG VAPG +++R      DE+          L ++QQR  LP+Y++R  ILY +E Y+ VV+VG+TGSGKTTQ+PQYLHEAGWT     VACTQPRR+AA +VAARVA+EMG QLG EVGY +RFD       T++K+ TDGML RE +LDPLL+ YSA+M+DEAHERT++ D+L G+LKK+++KRPDLRVI++SATLD E F +FF +N S D+S+DTA +MS++GR   VD+LYLE+P  +YI A+VE  + +H  + PGDIL+FL G EEID AV +I ERA    R   R         L ALP+Y  L    Q++VFEPA    R+ V AT++AE S+TI+G+ YVVD G  +L  Y+P T + +L+ +H S+ASA+QRAGRAGR  PGK  RL TE   F ALP+  VPEMQR+ L+ VVL LKALGI+NVL F+FLS P    M +ALELLY+L ALD+ GRLT P G  +AE PV+P LA +L++S    C +E +T+A +LSV+N F+ PS
Sbjct:    3 FWKPGTVAPGSSIDRETERETDESVVAQYNANEGLAISQQRLRLPIYKNRNHILYLLENYQVVVIVGQTGSGKTTQLPQYLHEAGWTANGHVVACTQPRRVAATSVAARVAEEMGVQLGQEVGYTIRFDDCSDSTLTRIKYMTDGMLFRETLLDPLLTRYSAIMIDEAHERTLHTDILVGVLKKILKKRPDLRVIISSATLDAEAFYNFFNSNTSNDKSKDTAVIMSLEGRMFPVDILYLEQPCNDYITASVETVMKIHEKEPPGDILLFLTGREEIDTAVSLITERAILYERSSMR---------LSALPIYGGLTFDEQLKVFEPAPRGTRKVVVATNIAEASITIQGIVYVVDAGFVKLRAYNPRTDMESLIVSHISKASAQQRAGRAGRTRPGKAFRLYTE-KAFDALPDNNVPEMQRSNLATVVLQLKALGIENVLYFDFLSPPPVSNMTKALELLYSLKALDDYGRLTMPFGVHLAEFPVDPLLAAMLMNSLSMKCADEILTIAAMLSVQNVFISPS 515          
BLAST of mRNA_S-ischiensis_contig8.19554.1 vs. uniprot
Match: A0A068SB59_9FUNG (Probable atp-dependent rna helicase dhx35 n=2 Tax=Lichtheimia TaxID=688353 RepID=A0A068SB59_9FUNG)

HSP 1 Score: 535 bits (1378), Expect = 1.050e-180
Identity = 275/526 (52.28%), Postives = 376/526 (71.48%), Query Frame = 1
Query:  163 FWKPGQVAPGLALERG-----DEAAPLH-DRRLSHLPLTQQRQALPVYRHRRSILYAVEKYRTVVLVGETGSGKTTQIPQYLHEAGWTKGDRTVACTQPRRIAAVTVAARVAQEMGCQLGAEVGYAVRFDAKCGPRTKLKFCTDGMLMREMMLDPLLSGYSAVMLDEAHERTIYNDVLFGLLKKVMRKRPDLRVIVASATLDPEQFRDFFETNRSKDRSRDTATVMSIQGRQHGVDVLYLERPAPNYIEAAVEAALSLHATQGPGDILVFLPGAEEIDAAVEMIRERAPP-PGRGQGRARGQGGAAPLQALPLYSALPVSAQMRVFEPAEGEVRRCVFATSVAETSVTIEGVRYVVDPGLARLPWYDPATGLGALLTTHASRASARQRAGRAGRVAPGKCLRLMTEGDYFRALPEFTVPEMQRTELSWVVLLLKALGIDNVLRFEFLSAPAAGAMARALELLYALGALDEEGRLTDPVGQAMAELPVEPRLAKLLVSSWGFGCVEEAVTLAGVLSVRNPFVDPSQA 1719
            FWKPG VAPG +++R      D+A   H +++  HL + QQR+ LPV++ RR ILY VEK++TV++VG+TG GKTTQIPQYL EAGWT   + VACTQPRRIAA +VA RVA+E  C+LGAEVGY +RFD +   RT++K+ TDGML RE M+DPLL+ Y+ +M+DEAHER++Y D+L G++KK+ +KRPDLRVI++SATLD E F  FF  N S DRS+DTAT++S++GR + VD+LY ++P  +Y+E  ++    +H  + PGDILVFL G +EID  V  + ER+   P R             L  LPLY+ L    Q+R+F+P     R+ + +T++AE SVT+EG+ YV+D G  ++  Y+P TG+ AL+ T  S+ASA QRAGRAGRV PGK  RL TE D ++ L + ++PE+QR+ L+ V+L LKALGIDNVLRF+FL+ P A  M RALELLY+L A+D+ GRLT P+G  +AE PV+P L K+L++S  F C EE +T+A +LSV+N F+ P +A
Sbjct:    3 FWKPGTVAPGSSVDRATEDETDKAVIAHAEQQFRHLTIKQQRERLPVFKLRREILYLVEKFQTVIVVGQTGCGKTTQIPQYLDEAGWTTNGKQVACTQPRRIAATSVAERVAEEKNCKLGAEVGYLIRFDDQTTQRTRIKYMTDGMLFRETMIDPLLTRYNVIMIDEAHERSLYTDILLGVIKKIQKKRPDLRVIISSATLDAEAFFRFFNHNHSSDRSKDTATILSLEGRMYPVDILYADQPVSDYVETTIQTVFDIHTKEPPGDILVFLTGRDEIDTVVAELYERSRTLPDRSMA----------LMPLPLYAGLTADEQLRIFQPTPRHSRKVIVSTNIAEASVTLEGIVYVIDCGFVKVRAYNPKTGMEALVVTPTSKASALQRAGRAGRVRPGKAFRLYTE-DTYKTLRDTSIPEIQRSNLAPVILQLKALGIDNVLRFDFLTPPPAELMIRALELLYSLKAIDDVGRLTMPLGMQLAEFPVDPMLGKILLASGEFKCSEEILTIAAMLSVQNVFIQPPKA 517          
BLAST of mRNA_S-ischiensis_contig8.19554.1 vs. uniprot
Match: S2KFR3_MUCC1 (Uncharacterized protein n=5 Tax=Mucorineae TaxID=1344963 RepID=S2KFR3_MUCC1)

HSP 1 Score: 533 bits (1374), Expect = 4.200e-180
Identity = 273/525 (52.00%), Postives = 377/525 (71.81%), Query Frame = 1
Query:  160 TFWKPGQVAPGLALERGDE-----AAPLH-DRRLSHLPLTQQRQALPVYRHRRSILYAVEKYRTVVLVGETGSGKTTQIPQYLHEAGWTKGDRTVACTQPRRIAAVTVAARVAQEMGCQLGAEVGYAVRFDAKCGPRTKLKFCTDGMLMREMMLDPLLSGYSAVMLDEAHERTIYNDVLFGLLKKVMRKRPDLRVIVASATLDPEQFRDFFETNRSKDRSRDTATVMSIQGRQHGVDVLYLERPAPNYIEAAVEAALSLHATQGPGDILVFLPGAEEIDAAVEMIRERAPPPGRGQGRARGQGGAAPLQALPLYSALPVSAQMRVFEPAEGEVRRCVFATSVAETSVTIEGVRYVVDPGLARLPWYDPATGLGALLTTHASRASARQRAGRAGRVAPGKCLRLMTEGDYFRALPEFTVPEMQRTELSWVVLLLKALGIDNVLRFEFLSAPAAGAMARALELLYALGALDEEGRLTDPVGQAMAELPVEPRLAKLLVSSWGFGCVEEAVTLAGVLSVRNPFVDPSQ 1716
            +FWKPG VAPG  L+R  E     A   H +++  HL LTQQR+ LPV++ RR +LY +EKY+TV++VG+TGSGKTTQIPQYL E+GW    + +ACTQPRRIAA +VA RVA+EM C +GAEVGY +RFD +   RTK+K+ TDGML RE M+DPLL+ YS +M+DEAHER++Y D+L G++KK+ +KRP+LRVI++SAT+D EQF  FF TN ++D S+DTAT++S++GR   VD+LY+++P  +Y+E  ++    +H  +  GDIL+F+ G EEID  V  + ER        G+   +   A +  LPLY+ L +  Q++VFEP     R+ + +T++AE SVT+EGV YV+D G  ++  Y+P TG+ AL+ T  S+ASA QRAGRAGRV PGK  RL TE  Y   L + ++PE+QR+ L+ V+L LKALGIDNVLRF+F++ P A  M RALELLY+L ALD+ GRLT P+G  +AE PV+P L K+L++S  FGC  E VT+A ++SV+N F+ P++
Sbjct:    2 SFWKPGTVAPGSTLDRDTENETTEAVVAHAEKQYRHLTLTQQRERLPVFKLRRELLYLLEKYQTVIVVGQTGSGKTTQIPQYLMESGWASKGKQIACTQPRRIAATSVAQRVAEEMNCSVGAEVGYLIRFDDQTSDRTKIKYMTDGMLFRETMIDPLLTKYSVIMVDEAHERSLYTDILIGVIKKIQKKRPELRVIISSATMDAEQFHGFFNTNTTRDPSKDTATIISLEGRMFPVDILYVDKPIVDYVEKCIQTVFDIHMKEPAGDILIFMTGREEIDKVVSEVYER--------GKTLPKNSLA-VMPLPLYAGLTIEEQLQVFEPTPKYTRKVIVSTNIAEASVTLEGVVYVIDTGFVKVRAYNPKTGMEALVVTPTSKASALQRAGRAGRVKPGKAFRLYTEETY-NTLRDTSIPEIQRSNLAPVILQLKALGIDNVLRFDFITPPPAELMTRALELLYSLKALDDVGRLTIPLGLQLAEFPVDPMLGKILLASKEFGCSHEIVTIAAMVSVQNIFIQPAK 516          
BLAST of mRNA_S-ischiensis_contig8.19554.1 vs. uniprot
Match: A0A8H7V106_9FUNG (Uncharacterized protein n=1 Tax=Mucor saturninus TaxID=64648 RepID=A0A8H7V106_9FUNG)

HSP 1 Score: 528 bits (1361), Expect = 3.710e-178
Identity = 275/524 (52.48%), Postives = 372/524 (70.99%), Query Frame = 1
Query:  163 FWKPGQVAPGLALERGDE-----AAPLH-DRRLSHLPLTQQRQALPVYRHRRSILYAVEKYRTVVLVGETGSGKTTQIPQYLHEAGWTKGDRTVACTQPRRIAAVTVAARVAQEMGCQLGAEVGYAVRFDAKCGPRTKLKFCTDGMLMREMMLDPLLSGYSAVMLDEAHERTIYNDVLFGLLKKVMRKRPDLRVIVASATLDPEQFRDFFETNRSKDRSRDTATVMSIQGRQHGVDVLYLERPAPNYIEAAVEAALSLHATQGPGDILVFLPGAEEIDAAVEMIRERAPPPGRGQGRARGQGGAAPLQALPLYSALPVSAQMRVFEPAEGEVRRCVFATSVAETSVTIEGVRYVVDPGLARLPWYDPATGLGALLTTHASRASARQRAGRAGRVAPGKCLRLMTEGDYFRALPEFTVPEMQRTELSWVVLLLKALGIDNVLRFEFLSAPAAGAMARALELLYALGALDEEGRLTDPVGQAMAELPVEPRLAKLLVSSWGFGCVEEAVTLAGVLSVRNPFVDPSQ 1716
            FWKPG  APG +L+R  E     A   H +++  HL L QQR+ LPV++ RR++LY VEKY+T ++VG+TG GKTTQIPQYL+EAGW    + +ACTQPRRIAA +VA RVA+EM C LG++VGY +RFD +    TK+K+ TDGML RE M+DPLL+ YS +M+DEAHER++Y D+L G++KK+ +KR DLRVI++SAT+D EQF  FF  N SKDRS+DTAT++S++GR   VD+LY E+P  +Y+E A++    +H  +  GDILVFL G EEID  V  I ER        G+   Q   A +  LPLY+ L +  Q++VFE A    R+ + +T++AE SVT+EG+ YV+D G  ++  Y+P TG+ AL+ T  S+ASA QRAGRAGRV  GK  RL TE  Y   L + ++PE+QR+ L+ V+L LKALGIDNVLRF+F++ P A  M RALELLY+L ALD+ GRLT P+G  +AE PV+P L K+L++S  FGC  E VT+A ++SV+N F+ P++
Sbjct:    3 FWKPGTTAPGSSLDRDTENETGEAVVAHAEKQYRHLTLQQQRERLPVFKLRRTLLYLVEKYQTTIVVGQTGCGKTTQIPQYLNEAGWAVNGKQIACTQPRRIAATSVAQRVAEEMNCPLGSQVGYLIRFDDQTNSDTKIKYMTDGMLFRETMIDPLLTNYSVIMIDEAHERSLYTDILIGVIKKIQKKRSDLRVIISSATMDAEQFYKFFNHNASKDRSKDTATIVSLEGRMFPVDILYAEKPVVDYMETAIQTVFDIHTKEPAGDILVFLTGREEIDTVVSEIYER--------GKTLPQNSLA-VMPLPLYAGLTIEEQLQVFESAPKYTRKIIVSTNIAEASVTLEGIVYVIDTGFVKVRAYNPKTGMEALVVTPVSKASALQRAGRAGRVKAGKAFRLYTEETY-GGLRDTSIPEIQRSNLAPVILQLKALGIDNVLRFDFITPPPAELMIRALELLYSLNALDQVGRLTIPLGMQLAEFPVDPMLGKILLASKEFGCSHEIVTIAAMMSVQNIFIQPAK 516          
BLAST of mRNA_S-ischiensis_contig8.19554.1 vs. uniprot
Match: A0A1C7N2B8_9FUNG (Putative ATP-dependent RNA helicase DHX35 n=1 Tax=Choanephora cucurbitarum TaxID=101091 RepID=A0A1C7N2B8_9FUNG)

HSP 1 Score: 528 bits (1361), Expect = 3.830e-178
Identity = 273/525 (52.00%), Postives = 376/525 (71.62%), Query Frame = 1
Query:  160 TFWKPGQVAPGLALERGDE-----AAPLH-DRRLSHLPLTQQRQALPVYRHRRSILYAVEKYRTVVLVGETGSGKTTQIPQYLHEAGWTKGDRTVACTQPRRIAAVTVAARVAQEMGCQLGAEVGYAVRFDAKCGPRTKLKFCTDGMLMREMMLDPLLSGYSAVMLDEAHERTIYNDVLFGLLKKVMRKRPDLRVIVASATLDPEQFRDFFETNRSKDRSRDTATVMSIQGRQHGVDVLYLERPAPNYIEAAVEAALSLHATQGPGDILVFLPGAEEIDAAVEMIRERAPPPGRGQGRARGQGGAAPLQALPLYSALPVSAQMRVFEPAEGEVRRCVFATSVAETSVTIEGVRYVVDPGLARLPWYDPATGLGALLTTHASRASARQRAGRAGRVAPGKCLRLMTEGDYFRALPEFTVPEMQRTELSWVVLLLKALGIDNVLRFEFLSAPAAGAMARALELLYALGALDEEGRLTDPVGQAMAELPVEPRLAKLLVSSWGFGCVEEAVTLAGVLSVRNPFVDPSQ 1716
            +FWKPG + PG +L+R  E     A   H +++  HL L QQR  LPV++ RR +LY +E ++TVV+VG+TG GKTTQIPQYL+E+GW+   + +ACTQPRRIAA +VA RVA+EM C+LGAEVGY +RFD K   +TK+K+ TDGML RE M+DPLLS YS VM+DEAHER++Y DVL G+LKKV +KR DL+VI++SAT+D EQF  FF  N ++D+++DTAT++S++GR + VD  Y+++P  +Y+E  ++    +H  +  GDIL+FL G EEID  VE + +R        G+   +   A +  LPLY+ L V  Q++VFEP     R+ + +T++AE SVT+EGV YV+D G  ++  Y+P TG+ AL+ T  S+ASA QRAGRAGRV PGK  RL TE  Y R L + + PE+QR+ L+ ++L LKALGIDNVLRF+F++ P A  M RALELLY+L ALD+ GRLT P+G  +AELP++P LAK+L++S  FGC  E VT+A + SV+N F+ P++
Sbjct:    2 SFWKPGTLVPGSSLDRDTENESSKAIVAHAEKQHRHLTLKQQRDRLPVFKLRRELLYLLETFQTVVIVGQTGCGKTTQIPQYLYESGWSGNGKQIACTQPRRIAATSVAQRVAEEMNCELGAEVGYLIRFDDKTSEKTKIKYMTDGMLFRETMIDPLLSNYSVVMIDEAHERSLYTDVLIGVLKKVQKKRKDLKVIISSATMDAEQFYQFFNANTNQDKTQDTATIISLEGRMYPVDTFYVDKPVADYLETCIQIVFDIHLKEPVGDILIFLTGREEIDRVVEEVYDR--------GKTLPKNSLA-IMPLPLYAGLTVEEQLQVFEPTPKYTRKVIVSTNIAEASVTLEGVVYVIDSGFVKMRAYNPKTGMEALVVTPISKASALQRAGRAGRVKPGKAYRLYTEETY-RQLKDTSTPEIQRSNLATIILQLKALGIDNVLRFDFITPPPAELMTRALELLYSLKALDDVGRLTIPMGMQLAELPLDPMLAKILLASKEFGCSHEIVTIAAMTSVQNIFIQPNK 516          
BLAST of mRNA_S-ischiensis_contig8.19554.1 vs. uniprot
Match: A0A7D9HHN9_PARCT (Probable ATP-dependent RNA helicase DHX35 n=2 Tax=Alcyonacea TaxID=40677 RepID=A0A7D9HHN9_PARCT)

HSP 1 Score: 525 bits (1352), Expect = 1.020e-176
Identity = 284/524 (54.20%), Postives = 370/524 (70.61%), Query Frame = 1
Query:  163 FWKPGQVAPG--LALER----GDEAAPLHDRRLSHLPLTQQRQALPVYRHRRSILYAVEKYRTVVLVGETGSGKTTQIPQYLHEAGWTKGDRTVACTQPRRIAAVTVAARVAQEMGCQLGAEVGYAVRFDAKCGP-RTKLKFCTDGMLMREMMLDPLLSGYSAVMLDEAHERTIYNDVLFGLLKKVMRKRPDLRVIVASATLDPEQFRDFFETNRSKDRSRDTATVMSIQGRQHGVDVLYLERPAPNYIEAAVEAALSLHATQGPGDILVFLPGAEEIDAAVEMIRERAPPPGRGQGRARGQGGAAPLQALPLYSALPVSAQMRVFEPAEGEVRRCVFATSVAETSVTIEGVRYVVDPGLARLPWYDPATGLGALLTTHASRASARQRAGRAGRVAPGKCLRLMTEGDYFRALPEFTVPEMQRTELSWVVLLLKALGIDNVLRFEFLSAPAAGAMARALELLYALGALDEEGRLTDPVGQAMAELPVEPRLAKLLVSSWGFGCVEEAVTLAGVLSVRNPFVDPS 1713
            FWKPG  APG  + LER    G+ A  +         + +QRQ LPVY+HR +ILY VEKY+TV++VGETG GK+TQIPQYLHE+G     + +  TQPRR+AA TVA RVA+E G  +G EVGY +RFD    P +T +KF TDGML+REMM DPLL+ YS +MLDE HERT+Y DV+ GLLKK+ +KR DL++IVASAT+D E FRDFF TN +KD+S+DTA ++S++GR    D+ Y+  P P+YI+A+V+A + +H  +GPGDILVFL G +E+++AV MI E+A    +G G          L+ LP+YS LP S QMR+FE +  + R+ V AT++AETS+TI+G+ YVVD G  ++  Y   TGL +L+    S+ASA QRAGRAGRV  GK  RL TE D+    P  TVPEMQRT L+ V+L LK++GIDNVLRF+FL+ P A  M RALELLYAL ALD++G LT P G  MAE P+EP LAK+L+ S  FGC EE +++A +L ++N FV PS
Sbjct:   10 FWKPGTEAPGSSIQLERTGKEGEGAGLVAFNPDVASSIARQRQRLPVYKHRTNILYLVEKYQTVIIVGETGCGKSTQIPQYLHESGLAGNGKIIGITQPRRVAATTVAMRVAEEKGTLIGQEVGYRIRFDDCTDPQKTAIKFVTDGMLIREMMADPLLTKYSVIMLDEVHERTLYTDVILGLLKKIQKKRHDLKLIVASATMDAEMFRDFFNTNITKDKSKDTAAILSVEGRTFPTDIYYVLSPVPDYIKASVDAVIGIHLEEGPGDILVFLTGQDEVESAVSMIIEKARALPKGHGF---------LKVLPIYSGLPFSEQMRIFERSSSKERKVVVATNIAETSITIDGIVYVVDCGFVKIKAYSAETGLESLVVVPISQASADQRAGRAGRVRSGKTYRLYTEDDFHNLSPA-TVPEMQRTNLAPVILQLKSMGIDNVLRFDFLARPPAEHMVRALELLYALEALDDDGCLTSPRGVNMAEFPLEPMLAKMLLVSGEFGCSEEILSIAAMLQIKNVFVTPS 523          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19554.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRA6_ECTSI3.840e-24768.05Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z495_9STRA1.790e-20660.57P-loop containing nucleoside triphosphate hydrolas... [more]
L8GZI0_ACACA1.680e-18455.47PremRNA splicing factor, putative n=1 Tax=Acantham... [more]
W7TSM4_9STRA9.250e-18354.48Deah (Asp-glu-ala-his) box polypeptide 35 n=2 Tax=... [more]
A0A0L0HH03_SPIPD8.880e-18254.49Uncharacterized protein n=2 Tax=Spizellomyces TaxI... [more]
A0A068SB59_9FUNG1.050e-18052.28Probable atp-dependent rna helicase dhx35 n=2 Tax=... [more]
S2KFR3_MUCC14.200e-18052.00Uncharacterized protein n=5 Tax=Mucorineae TaxID=1... [more]
A0A8H7V106_9FUNG3.710e-17852.48Uncharacterized protein n=1 Tax=Mucor saturninus T... [more]
A0A1C7N2B8_9FUNG3.830e-17852.00Putative ATP-dependent RNA helicase DHX35 n=1 Tax=... [more]
A0A7D9HHN9_PARCT1.020e-17654.20Probable ATP-dependent RNA helicase DHX35 n=2 Tax=... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:2133143..2136200 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score713.0
Seed ortholog evalue1.1e-202
Seed eggNOG ortholog2880.D7FRA6
Preferred nameDHX35
KEGG koko:K13117
KEGG ModuleM00355
GOsGO:0003674,GO:0003676,GO:0003723,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005681,GO:0005737,GO:0005829,GO:0005911,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009506,GO:0009987,GO:0010467,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030054,GO:0032991,GO:0034641,GO:0042623,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0055044,GO:0070035,GO:0071704,GO:0090304,GO:0097159,GO:0140098,GO:1901360,GO:1901363,GO:1990904
EggNOG free text desc.helicase activity
EggNOG OGsCOG1643@1,KOG0922@2759
EC3.6.4.13
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00002,ko01000,ko03041
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionP-loop containing nucleoside triphosphate hydrolase
Ec32 orthologEc-26_002440.1
Exons4
Model size1723
Cds size1722
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19554.1prot_S-ischiensis_contig8.19554.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig8 2133143..2136200 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817288.187394-CDS-S-ischiensis_contig8:2133142..21332831622817288.187394-CDS-S-ischiensis_contig8:2133142..2133283Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 2133143..2133283 -
1695740998.1600184-CDS-S-ischiensis_contig8:2133142..21332831695740998.1600184-CDS-S-ischiensis_contig8:2133142..2133283Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 2133143..2133283 -
1622817288.1986887-CDS-S-ischiensis_contig8:2134015..21346661622817288.1986887-CDS-S-ischiensis_contig8:2134015..2134666Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 2134016..2134666 -
1695740998.1766713-CDS-S-ischiensis_contig8:2134015..21346661695740998.1766713-CDS-S-ischiensis_contig8:2134015..2134666Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 2134016..2134666 -
1622817288.2093382-CDS-S-ischiensis_contig8:2134910..21350551622817288.2093382-CDS-S-ischiensis_contig8:2134910..2135055Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 2134911..2135055 -
1695740998.185676-CDS-S-ischiensis_contig8:2134910..21350551695740998.185676-CDS-S-ischiensis_contig8:2134910..2135055Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 2134911..2135055 -
1622817288.2199457-CDS-S-ischiensis_contig8:2135415..21362001622817288.2199457-CDS-S-ischiensis_contig8:2135415..2136200Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 2135416..2136200 -
1695740998.1945734-CDS-S-ischiensis_contig8:2135415..21362001695740998.1945734-CDS-S-ischiensis_contig8:2135415..2136200Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 2135416..2136200 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig8.19554.1

>prot_S-ischiensis_contig8.19554.1 ID=prot_S-ischiensis_contig8.19554.1|Name=mRNA_S-ischiensis_contig8.19554.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=574bp
FTPNRAVAGAGRGRSLTPALPSELQLQQQPAPGGIARGTGSSRLVLWEIV
VMTTFWKPGQVAPGLALERGDEAAPLHDRRLSHLPLTQQRQALPVYRHRR
SILYAVEKYRTVVLVGETGSGKTTQIPQYLHEAGWTKGDRTVACTQPRRI
AAVTVAARVAQEMGCQLGAEVGYAVRFDAKCGPRTKLKFCTDGMLMREMM
LDPLLSGYSAVMLDEAHERTIYNDVLFGLLKKVMRKRPDLRVIVASATLD
PEQFRDFFETNRSKDRSRDTATVMSIQGRQHGVDVLYLERPAPNYIEAAV
EAALSLHATQGPGDILVFLPGAEEIDAAVEMIRERAPPPGRGQGRARGQG
GAAPLQALPLYSALPVSAQMRVFEPAEGEVRRCVFATSVAETSVTIEGVR
YVVDPGLARLPWYDPATGLGALLTTHASRASARQRAGRAGRVAPGKCLRL
MTEGDYFRALPEFTVPEMQRTELSWVVLLLKALGIDNVLRFEFLSAPAAG
AMARALELLYALGALDEEGRLTDPVGQAMAELPVEPRLAKLLVSSWGFGC
VEEAVTLAGVLSVRNPFVDPSQAG
back to top

mRNA from alignment at S-ischiensis_contig8:2133143..2136200-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig8.19554.1 ID=mRNA_S-ischiensis_contig8.19554.1|Name=mRNA_S-ischiensis_contig8.19554.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=3058bp|location=Sequence derived from alignment at S-ischiensis_contig8:2133143..2136200- (Schizocladia ischiensis KU_0333)
TTCACACCTAACAGAGCTGTAGCAGGCGCAGGCCGCGGACGCAGTCTGAC CCCCGCCCTTCCAAGTGAGCTACAGCTGCAGCAGCAACCCGCTCCCGGCG GTATTGCCAGAGGAACTGGGAGTTCCCGACTGGTACTCTGGGAGATTGTG GTCATGACTACCTTTTGGAAGCCAGGGCAGGTGGCCCCTGGCCTGGCCTT GGAGAGGGGCGACGAGGCCGCGCCCCTGCACGACCGGCGGCTGTCTCATC TCCCGCTCACCCAGCAGCGCCAGGCGCTGCCGGTGTACCGCCACCGCCGC TCGATCCTGTACGCCGTGGAGAAGTACCGCACGGTCGTCCTCGTGGGCGA GACGGGGTCCGGGAAAACAACGCAGATCCCCCAGTACCTCCACGAGGCGG GGTGGACCAAGGGCGACCGCACCGTCGCGTGCACGCAGCCCCGGCGGATT GCCGCCGTGACCGTGGCCGCGCGGGTGGCCCAGGAGATGGGGTGCCAGCT CGGGGCCGAGGTGGGGTACGCGGTCCGCTTCGACGCCAAGTGCGGGCCGC GGACCAAGCTCAAGTTTTGCACGGATGGGATGCTCATGCGGGAGATGATG CTGGACCCGCTGCTGTCTGGGTACAGCGCCGTGATGCTCGACGAGGCGCA CGAGCGCACCATCTACAACGACGTCCTCTTCGGCCTGCTCAAGAAGGTCA TGCGCAAGCGGCCGGACCTGCGCGTCATCGTCGCCTCGGCCACCCTGGAC CCCGAGCAGTTCCGCGACTTCTTCGAGACCAACAGGTTGTCCAGAGCGCA GCGAATATTAACCCTTTTACCCCTAGGAAATTGGGCTTGCACACTAAAAC CTACGATTTTACGGACCCCAGGGGTAAAAGGGTTAAATGTCGGGGCTGCG TGCCGGCCGTGGTGTGATGCACTTCCGTCGACCCTCCCGCCCTTTTGTCC TTCCCTCCACCCACCTATCCCCAAACCCCCCCCCTCCCCCAACCAAGCAA CCACCCGTGTACCCACTCACACACCCACCCACCCGCCCGCCCTTGCTCGT CCGTCCATCTCTCCTTCCGCCCTTCCTCTCTGCACCCCCGTTTCCCACCA CCTGGTGGTGACGGCGCGGACAACCACCACAACCGCCGACAACAGATCCA AGGACCGCTCGCGCGACACGGCCACCGTCATGTCCATCCAGGGCCGCCAG CACGGGGTGGACGTCCTCTACCTCGAGCGCCCCGCGCCCAACTACATCGA GGCCGCTGTGGAGGCCGCGCTGAGCCTACACGCCACCCAGGTAGCCATGG TACAAAATTGCGATCGCTATTATTTTTGGTGCCCGGGCCGCCCTATGAAG GACGCACTGGACGGATGATTTTTTTTTTTTCGACACATGAAAGAGCTCGA TGAGTACGTTCATTTGCGCTTGTACAGTTTTCGTATCACAACATCGCATG GACCGAGCAACAACAGGTCAATCGATATTCAATAACACTATCGGGGCAAA CAAAATCGCACTTTTGTACCACGGCTACACCCAGGGCCCCGGGGACATCC TGGTCTTCCTCCCCGGCGCCGAGGAGATCGACGCCGCCGTTGAGATGATC CGGGAGCGGGCGCCGCCCCCGGGCCGGGGCCAGGGCCGGGCCCGGGGCCA GGGCGGGGCGGCCCCGCTGCAGGCCCTGCCGCTCTACTCGGCCCTCCCGG TGAGCGCGCAGATGCGGGTGTTCGAGCCCGCAGAGGGGGAAGTCCGGCGC TGCGTTTTCGCCACCTCGGTGGCGGAGACGTCGGTGACGATCGAGGGGGT GCGGTACGTGGTGGACCCGGGGCTGGCGCGGCTGCCGTGGTACGACCCGG CCACGGGGCTGGGGGCGCTGCTGACCACGCACGCCTCCCGGGCGTCGGCG CGGCAGCGGGCCGGGCGGGCGGGGCGCGTGGCCCCCGGGAAGTGCTTGAG GCTTATGACCGAGGGGGACTATTTCCGGGCGCTGCCGGAGTTCACGGTCC CGGAGATGCAGCGGACAGAGCTGAGCTGGGTGGTGCTGCTGCTCAAGGCG CTGGGTATTGATAACGTGCTGAGGTTTGAGTTCCTGTCGGCGCCGGCGGC CGGGGCGATGGCGCGGGCGCTGGAGCTGCTGTATGCGCTCGGGGCGCTGG ATGAGGAGGGGCGGCTCACCGACCCCGTCGGCCAGGCGAGTTGGAGTTTG TGGGGCTTTTGTGAGGGTTTTTTGTGTGGTTGAGGGGGGGGGGGCGTCTC ATTTTTGTCTTTCTTTTGCTTCGAATGGGGTGTGTAAGAGTATGAGGTGG AGCTCGGCTGAGGTGCTAGTGTAGGGTCGATCGATGGTCTCGGGACTACG GCATGCTCAACGTGAGTATTTGTGCTACTGTAAGTAGTACTACTGCACTC ACTACTACTACTACGAGTACCACTACTACTGCTACCAAGTGTGTACGAGT AGTACGAGTACAGTATTAGTACTCAAAGTACTCTACTTCTGGAAGCATAT GTCTTTTTCTTGAGAGGGGGAGGGTCCGCATGCAAATACTTCCAAGCACC TGTGTACTGTACGGTGCTTCCCTGGAATGACGACAGACGCTGATTGGCTG CGCTGCCAAAGTGCCGTGCTGGACTGTGCTCGTACAACTCACTACGCCAT GCACTTCGAGATTACATGTACGAGTACATGTACGGTAGTACAGTAGCTAC AGTACAGTACGGAGTTCTTCGAAGTACTTGTACCCTGTACAGGAAAAACT GTATACTCGTACAGTACGAGCACCTAGGTGCCTGGAGCGCCAACTGGACC TGCGTGAAAGCACCACAAAACACCCACCGCCGGCAAACAAACAACCAAAA AACACAAAACAAAAACAAAACAAAACAAAAAAATGCCCCCCCCCTCCCTC CCTCCCTCCAATCGCAGGCCATGGCCGAGCTGCCCGTGGAGCCCCGCCTT GCCAAGCTCCTGGTCTCCTCCTGGGGCTTTGGCTGCGTGGAGGAGGCCGT CACCCTGGCGGGCGTTCTCTCCGTCCGGAACCCCTTCGTTGACCCCAGCC AAGCCGGC
back to top

Coding sequence (CDS) from alignment at S-ischiensis_contig8:2133143..2136200-

>mRNA_S-ischiensis_contig8.19554.1 ID=mRNA_S-ischiensis_contig8.19554.1|Name=mRNA_S-ischiensis_contig8.19554.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=3444bp|location=Sequence derived from alignment at S-ischiensis_contig8:2133143..2136200- (Schizocladia ischiensis KU_0333)
TTCACACCTAACAGAGCTGTAGCAGGCGCAGGCCGCGGACGCAGTCTGAC
CCCCGCCCTTCCAAGTGAGCTACAGCTGCAGCAGCAACCCGCTCCCGGCG
GTATTGCCAGAGGAACTGGGAGTTCCCGACTGGTACTCTGGGAGATTGTG
GTCATGACTACCTTTTGGAAGCCAGGGCAGGTGGCCCCTGGCCTGGCCTT
GGAGAGGGGCGACGAGGCCGCGCCCCTGCACGACCGGCGGCTGTCTCATC
TCCCGCTCACCCAGCAGCGCCAGGCGCTGCCGGTGTACCGCCACCGCCGC
TCGATCCTGTACGCCGTGGAGAAGTACCGCACGGTCGTCCTCGTGGGCGA
GACGGGGTCCGGGAAAACAACGCAGATCCCCCAGTACCTCCACGAGGCGG
GGTGGACCAAGGGCGACCGCACCGTCGCGTGCACGCAGCCCCGGCGGATT
GCCGCCGTGACCGTGGCCGCGCGGGTGGCCCAGGAGATGGGGTGCCAGCT
CGGGGCCGAGGTGGGGTACGCGGTCCGCTTCGACGCCAAGTGCGGGCCGC
GGACCAAGCTCAAGTTTTGCACGGATGGGATGCTCATGCGGGAGATGATG
CTGGACCCGCTGCTGTCTGGGTACAGCGCCGTGATGCTCGACGAGGCGCA
CGAGCGCACCATCTACAACGACGTCCTCTTCGGCCTGCTCAAGAAGGTCA
TGCGCAAGCGGCCGGACCTGCGCGTCATCGTCGCCTCGGCCACCCTGGAC
CCCGAGCAGTTCCGCGACTTCTTCGAGACCAACAGTTCACACCTAACAGA
GCTGTAGCAGGCGCAGGCCGCGGACGCAGTCTGACCCCCGCCCTTCCAAG
TGAGCTACAGCTGCAGCAGCAACCCGCTCCCGGCGGTATTGCCAGAGGAA
CTGGGAGTTCCCGACTGGTACTCTGGGAGATTGTGGTCATGACTACCTTT
TGGAAGCCAGGGCAGGTGGCCCCTGGCCTGGCCTTGGAGAGGGGCGACGA
GGCCGCGCCCCTGCACGACCGGCGGCTGTCTCATCTCCCGCTCACCCAGC
AGCGCCAGGCGCTGCCGGTGTACCGCCACCGCCGCTCGATCCTGTACGCC
GTGGAGAAGTACCGCACGGTCGTCCTCGTGGGCGAGACGGGGTCCGGGAA
AACAACGCAGATCCCCCAGTACCTCCACGAGGCGGGGTGGACCAAGGGCG
ACCGCACCGTCGCGTGCACGCAGCCCCGGCGGATTGCCGCCGTGACCGTG
GCCGCGCGGGTGGCCCAGGAGATGGGGTGCCAGCTCGGGGCCGAGGTGGG
GTACGCGGTCCGCTTCGACGCCAAGTGCGGGCCGCGGACCAAGCTCAAGT
TTTGCACGGATGGGATGCTCATGCGGGAGATGATGCTGGACCCGCTGCTG
TCTGGGTACAGCGCCGTGATGCTCGACGAGGCGCACGAGCGCACCATCTA
CAACGACGTCCTCTTCGGCCTGCTCAAGAAGGTCATGCGCAAGCGGCCGG
ACCTGCGCGTCATCGTCGCCTCGGCCACCCTGGACCCCGAGCAGTTCCGC
GACTTCTTCGAGACCAACAGATCCAAGGACCGCTCGCGCGACACGGCCAC
CGTCATGTCCATCCAGGGCCGCCAGCACGGGGTGGACGTCCTCTACCTCG
AGCGCCCCGCGCCCAACTACATCGAGGCCGCTGTGGAGGCCGCGCTGAGC
CTACACGCCACCCAGATCCAAGGACCGCTCGCGCGACACGGCCACCGTCA
TGTCCATCCAGGGCCGCCAGCACGGGGTGGACGTCCTCTACCTCGAGCGC
CCCGCGCCCAACTACATCGAGGCCGCTGTGGAGGCCGCGCTGAGCCTACA
CGCCACCCAGGGCCCCGGGGACATCCTGGTCTTCCTCCCCGGCGCCGAGG
AGATCGACGCCGCCGTTGAGATGATCCGGGAGCGGGCGCCGCCCCCGGGC
CGGGGCCAGGGCCGGGCCCGGGGCCAGGGCGGGGCGGCCCCGCTGCAGGC
CCTGCCGCTCTACTCGGCCCTCCCGGTGAGCGCGCAGATGCGGGTGTTCG
AGCCCGCAGAGGGGGAAGTCCGGCGCTGCGTTTTCGCCACCTCGGTGGCG
GAGACGTCGGTGACGATCGAGGGGGTGCGGTACGTGGTGGACCCGGGGCT
GGCGCGGCTGCCGTGGTACGACCCGGCCACGGGGCTGGGGGCGCTGCTGA
CCACGCACGCCTCCCGGGCGTCGGCGCGGCAGCGGGCCGGGCGGGCGGGG
CGCGTGGCCCCCGGGAAGTGCTTGAGGCTTATGACCGAGGGGGACTATTT
CCGGGCGCTGCCGGAGTTCACGGTCCCGGAGATGCAGCGGACAGAGCTGA
GCTGGGTGGTGCTGCTGCTCAAGGCGCTGGGTATTGATAACGTGCTGAGG
TTTGAGTTCCTGTCGGCGCCGGCGGCCGGGGCGATGGCGCGGGCGCTGGA
GCTGCTGTATGCGCTCGGGGCGCTGGATGAGGAGGGGCGGCTCACCGACC
CCGTCGGCCAGGGCCCCGGGGACATCCTGGTCTTCCTCCCCGGCGCCGAG
GAGATCGACGCCGCCGTTGAGATGATCCGGGAGCGGGCGCCGCCCCCGGG
CCGGGGCCAGGGCCGGGCCCGGGGCCAGGGCGGGGCGGCCCCGCTGCAGG
CCCTGCCGCTCTACTCGGCCCTCCCGGTGAGCGCGCAGATGCGGGTGTTC
GAGCCCGCAGAGGGGGAAGTCCGGCGCTGCGTTTTCGCCACCTCGGTGGC
GGAGACGTCGGTGACGATCGAGGGGGTGCGGTACGTGGTGGACCCGGGGC
TGGCGCGGCTGCCGTGGTACGACCCGGCCACGGGGCTGGGGGCGCTGCTG
ACCACGCACGCCTCCCGGGCGTCGGCGCGGCAGCGGGCCGGGCGGGCGGG
GCGCGTGGCCCCCGGGAAGTGCTTGAGGCTTATGACCGAGGGGGACTATT
TCCGGGCGCTGCCGGAGTTCACGGTCCCGGAGATGCAGCGGACAGAGCTG
AGCTGGGTGGTGCTGCTGCTCAAGGCGCTGGGTATTGATAACGTGCTGAG
GTTTGAGTTCCTGTCGGCGCCGGCGGCCGGGGCGATGGCGCGGGCGCTGG
AGCTGCTGTATGCGCTCGGGGCGCTGGATGAGGAGGGGCGGCTCACCGAC
CCCGTCGGCCAGGCCATGGCCGAGCTGCCCGTGGAGCCCCGCCTTGCCAA
GCTCCTGGTCTCCTCCTGGGGCTTTGGCTGCGTGGAGGAGGCCGTCACCC
TGGCGGGCGTTCTCTCCGTCCGGAACCCCTTCGTTGACCCCAGCCAAGCC
GGCGCCATGGCCGAGCTGCCCGTGGAGCCCCGCCTTGCCAAGCTCCTGGT
CTCCTCCTGGGGCTTTGGCTGCGTGGAGGAGGCCGTCACCCTGGCGGGCG
TTCTCTCCGTCCGGAACCCCTTCGTTGACCCCAGCCAAGCCGGC
back to top