mRNA_S-ischiensis_contig8.19539.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig8.19539.1
Unique NamemRNA_S-ischiensis_contig8.19539.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
[Close]
BLAST of mRNA_S-ischiensis_contig8.19539.1 vs. uniprot
Match: D7FQ53_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ53_ECTSI)

HSP 1 Score: 214 bits (545), Expect = 3.350e-63
Identity = 111/237 (46.84%), Postives = 140/237 (59.07%), Query Frame = 2 
Query:  110 LDEDYEERMLQFEIDCNAGKGNPVACHQAGEYLSVVRGEHSKAARLFKDNCHANGHAPSCFNYGRALLTGKGMKPSDSAAVQAFEQACEGGHAAACYHLGLLLQSGCDGVRKDPARAENVXXXXXXXXXXXXXXXXATRLLR-GSKGAAGGAKAGAXXXXXXXXXXXXXXXRDPPRARRLLEQACANNHGPSCFNLAVMLKKGDEGVPRDEKLFQQYKAKTEALVREMGGLTGKKVA 817
            +D +YE+RM  FE DCN GKGN VACHQ GEYLSVV+ +  KA R+F+ NC+   HAPSCFN GR LL GKG+  SD+ A + F+ AC   H  AC HLG +   G +G ++D  +A  V                A +LLR   KG                        RDPPRAR LLE+ C++NHGPSCFNL VMLKKGDEGVP D K +++Y+ KTE+L  ++ G+ G K A
Sbjct:    7 VDAEYEDRMRTFESDCNDGKGNAVACHQVGEYLSVVKNDFDKAGRIFEANCNTRNHAPSCFNLGRFLLAGKGLPQSDAQAEKVFDSACGKDHQPACLHLGFMHLYGGEGFKRDIKKAIEVLDTSCSGGLADSCNMLAKQLLRHDGKGPV---------------------PRDPPRARGLLEKGCSHNHGPSCFNLTVMLKKGDEGVPSDYKKYREYREKTESLAAQLQGIDGNKQA 222
[Close]
BLAST of mRNA_S-ischiensis_contig8.19539.1 vs. uniprot
Match: A0A7S1UIG9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UIG9_9STRA)

HSP 1 Score: 173 bits (439), Expect = 2.640e-47
Identity = 92/231 (39.83%), Postives = 124/231 (53.68%), Query Frame = 2 
Query:  110 LDEDYEERMLQFEIDCNAGKGNPVACHQAGEYLSVVRGEHSKAARLFKDNCHANGHAPSCFNYGRALLTGKGMKPSDSAAVQAFEQACEGGHAAACYHLGLLLQSGCDGVRKDPARAEN-VXXXXXXXXXXXXXXXXATRLLRGSKGAAGGAKAGAXXXXXXXXXXXXXXXRDPPRARRLLEQACANNHGPSCFNLAVMLKKGDEGVPRDEKLFQQYKAKTEALVREMGGL 799
            LDEDY+ RM  FE DC  GKG+  +C  AGE+ +VV+ +H +AAR+F+ NC    +  SCF+  R  +TGKG +  D+ A   FE+AC+ GHA  CYH GLL +SG       P+  ++                  AT+ L+     A   K G                RDP +A +LLE+ C   HGPSCFN AVM KKGD GV  D + F +YKA+T+ LV+  G +
Sbjct:    6 LDEDYQTRMAGFEADCADGKGDGYSCQSAGEFFAVVKTDHERAARIFQRNCDEGNYGSSCFSMARFHITGKGAEQDDAKAFAYFEKACKHGHAPGCYHAGLLKRSGVGTAPNLPSAMKDFTVACQDPGNIPEACYEMATQFLKARDAVAEPKKGGWLPGWLGGGGGDKPIERDPVKALKLLERGCERGHGPSCFNAAVMYKKGDTGVAPDPEKFARYKAETQRLVKVHGSV 236
[Close]
BLAST of mRNA_S-ischiensis_contig8.19539.1 vs. uniprot
Match: A0A7R9UGB8_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UGB8_9STRA)

HSP 1 Score: 172 bits (436), Expect = 3.060e-46
Identity = 95/232 (40.95%), Postives = 130/232 (56.03%), Query Frame = 2 
Query:  110 LDEDYEERMLQFEIDCNAGKGNPVACHQAGEYLSVVRGEHSKAARLFKDNCHANGHAPSCFNYGRALLTGKGMKPSDSAAVQAFEQACEGGHAAACYHLGLLLQSGCDGVRKD-PARAENVXXXXXXXXXXXXXXXX-ATRLLRGSKGAAGGAKAGAXXXXXXXXXXXXXXXRDPPRARRLLEQACANNHGPSCFNLAVMLKKGDEGVPRDEKLFQQYKAKTEALVREMGGL 799
            +D++YEERM  +EIDC  GKG P AC  A E+ SVV+G+H +A  +FK NC  N +  SCF+  RAL+TGKG + SD  A + F+++C+  +A  CYH GLL ++G  G RKD P   +N                  A +LL+  + A     +                 R+P  AR+LLE+ C   HG SCFNLAVM K GD+GVP D   FQ+YK +TE L++  G +
Sbjct:   63 VDKEYEERMAAYEIDCAEGKGEPYACQCAAEFFSVVKGDHPRAYTIFKRNCLENRYGASCFSTARALITGKGAEQSDEQAFEYFDKSCQLEYAPGCYHAGLLRRAGL-GTRKDVPEALKNFESACQDPGNIPEACYEKALQLLKPLEEAQSKKSS-----WFSWGDDRSSVPRNPEEARKLLERGCRQAHGASCFNLAVMYKNGDDGVPADAAKFQEYKKETERLIKAQGSM 288
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BLAST of mRNA_S-ischiensis_contig8.19539.1 vs. uniprot
Match: W7TNA5_9STRA (Hcp beta-lactamase-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TNA5_9STRA)

HSP 1 Score: 159 bits (402), Expect = 4.000e-42
Identity = 89/240 (37.08%), Postives = 125/240 (52.08%), Query Frame = 2 
Query:  101 MEPLDEDYEERMLQFEIDCNAGKGNPVACHQAGEYLSVVRGEHSKAARLFKDNCHANGHAPSCFNYGRALLTGKGMKPSDSAAVQAFEQACEGGHAAACYHLGLLLQSGCDG---VRKDPARAENVXXXXXXXXXXXXXXXXATRLLRGSKGAAGGAKAGAXXXXXXXXXXXXXXXRDPPRARRLLEQACANNHGPSCFNLAVMLKKGDEGVPRDEKLFQQYKAKTEALVREMGGLTGKK 811
            ++ +D +YEERML FE+DC+ GKG+  ACH  GE+L+VV+G+++KAA+++ DNC    H PSCFN GR  L G+G+  SD+ +++ F+ +C+ GH  AC+H+GLLL  G DG   V KD  +A  +                A+ LLR                           X                        LAVM KKGD G+PR+E+ F++YK  TE LV + G LT KK
Sbjct:    5 LQAIDPEYEERMLAFEMDCDKGKGDAWACHSVGEFLAVVKGDYNKAAKVYTDNCAKYSHPPSCFNLGRLYLGGRGVPQSDTRSLKCFDTSCKAGHGMACHHMGLLLLYGKDGGYDVSKDVKKATGILNKACGEGIPDSCYALASHLLR-------------------HLPEDKSHXXXXXXXXXXXXXXXXXXXXXXXXXLAVMHKKGDTGIPRNEQEFEKYKKVTEDLVEQTGALTWKK 225
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BLAST of mRNA_S-ischiensis_contig8.19539.1 vs. uniprot
Match: A0A7S3MAS8_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MAS8_9STRA)

HSP 1 Score: 155 bits (392), Expect = 2.530e-40
Identity = 90/254 (35.43%), Postives = 126/254 (49.61%), Query Frame = 2 
Query:  101 MEPLDEDYEERMLQFEIDCNAGKGNPVACHQAGEYLSVVRGEHSKAARLFKDNCHANGHAPSCFNYGRALLTGKGMKPSDSAAVQAFEQACEGGHAAACYHLGLLLQSG------------------CDGVRKDPARAENVXXXXXXXXXXXXXXXXATRLLRGSKGAAGGAKAGAXXXXXXXXXXXXXXXRDPPRARRLLEQACANNHGPSCFNLAVMLKKGDEGVPRDEKLFQQYKAKTEALVR-EMGGLTG 805
            M+ +DE Y  +M  FEIDCN GKG P ACH AGE+ + V GEH +AA ++K+NC  N + PSCFN GR  L+G+G++ +D+ A+   ++ C+     ACY   +LL  G                       K P  A  V                    L+  + A  G ++ +               R+P +A   L +AC  NH PSC+NLA+M KKGD GV  D +LF+++K +TE LV    G LTG
Sbjct:    1 MQRIDEAYILKMAGFEIDCNDGKGEPSACHHAGEFYATVNGEHKRAAEIYKNNCENNKYGPSCFNLGRYHLSGQGVEQNDAKALDYLDRGCKSNLYPACYFQAMLLYDGMLPAGSIVQSKASIELLPASKEAKVPLSAPTVPGNTASSSVQKKSDKPLA--LKIFEKACLGGESNSCSVLAAEYLKPGNPQRNPVKAMEHLRRACEGNHAPSCYNLAIMFKKGDTGVQPDPELFEKFKVRTEELVEMAKGQLTG 252
[Close]
BLAST of mRNA_S-ischiensis_contig8.19539.1 vs. uniprot
Match: F0WJI5_9STRA (Hcp betalactamaselike protein putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WJI5_9STRA)

HSP 1 Score: 152 bits (383), Expect = 3.130e-39
Identity = 94/231 (40.69%), Postives = 133/231 (57.58%), Query Frame = 2 
Query:  125 EERMLQFEIDCNAGKGNPVACHQAGEYLSVVRGEHSKAARLFKDNCHANGHAPSCFNYGRALLTGKGMKPSDSAAVQAFEQACEGGHAAACYHLGLLLQSGCDGVRKDPARAENVXXXXXXXXXXXXXXXXATRLLRGSKGAAGGAKAGAXXXXXXXXXXXXXXXRDPPRARRLLEQACANNHGPSCFNLAVMLKKGDEGVPRDEKLFQQYKAKTEALVREMGGLTGKKVA 817
            E+R+ +F+ +C+ GKG+P+ACH  GE+L+VV  +++ AA +++ NC  N +A SCFN GR  L GKG++ +D  A++ FE +C   HA AC H  L+   G  G  KD  R     XXXXXXXXXXXX    +  L   K                         RDP RA++   +AC  N  P+C+NLAVM K GD GV ++E+L+++YK KTE LV +  G+ G K +
Sbjct:   24 EDRLHEFKANCDNGKGDPMACHSWGEWLTVVEKDYNSAAEVYRKNCEQNCYAASCFNLGRLTLAGKGIEENDEKALELFESSCAKKHAQACQHAALMYLEGI-GTSKDVLRGLAGLXXXXXXXXXXXXSRVGSFYLDPPK--------------IENKEQSKKLQRDPIRAKKYYGRACDANFAPACYNLAVMFKNGDTGVDKNEELYEEYKKKTEQLVNQAKGMLGVKTS 239
[Close]
BLAST of mRNA_S-ischiensis_contig8.19539.1 vs. uniprot
Match: F0Y0E8_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y0E8_AURAN)

HSP 1 Score: 136 bits (343), Expect = 8.220e-34
Identity = 85/238 (35.71%), Postives = 108/238 (45.38%), Query Frame = 2 
Query:  104 EPLDEDYEERMLQFEIDCNAGKGNPVACHQAGEYLSVVRGEHSKAARLFKDNCHANGHAPSCFNYGRALLTGKGMKPSDSAAVQAFEQACEGGHAAACYHLGLLLQSGCDGVRKDPARAENVXXXXXXXXXXXXXXXXATRLLRGSKGAAGGAKAGAXXXXXXXXXXXXXXXRDPPRARRLLEQACANNHGPSCFNLAVMLKKGDEGVPRDEKLFQQYKAKTEALVREMGGLTGKKVA 817
            E L +DYEERM+   +DC  GKG+  ACH  GE+ SV+R +++ A   +  NC A  H  SCF  GR LL G+G    ++   +AF   C+ GHA AC+HLG+L        RKD A A                      L    K   GG  A                 + P +AR                NLAVM+K GD GVPRD KLF +Y A+T  LV   G   G +VA
Sbjct:    5 ETLPKDYEERMVSASVDCAGGKGDGDACHAVGEFFSVIRKDYAAARETYGKNCEARKHGASCFALGRLLLGGRGGAADEARGERAFAAGCDRGHAPACHHLGVLAFK-----RKDDAAA----------------------LAHLEKACDGGDAASCYVLGGYFLRPGAA--KQPAKAREXXXXXXXXXXXXXXHNLAVMMKNGDVGVPRDAKLFDKYAARTRELVAAAGAARGVRVA 213
[Close]
BLAST of mRNA_S-ischiensis_contig8.19539.1 vs. uniprot
Match: A0A7S1XZ45_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XZ45_9STRA)

HSP 1 Score: 137 bits (344), Expect = 1.230e-33
Identity = 75/201 (37.31%), Postives = 104/201 (51.74%), Query Frame = 2 
Query:  200 EYLSVVRGEHSKAARLFKDNCHANGHAPSCFNYGRALLTGKGMKPSDSAAVQAFEQACEGGHAAACYHLGLLLQSGCDGVRKDPARAEN-VXXXXXXXXXXXXXXXXATRLLRGSKGAAGGAKAGAXXXXXXXXXXXXXXXRDPPRARRLLEQACANNHGPSCFNLAVMLKKGDEGVPRDEKLFQQYKAKTEALVREMGGL 799
            E+ +VV+ +H +AAR+F+ NC    +  SCF+  R  +TGKG +  D+ A   FE+AC+ GHA  CYH GLL +SG       P+  ++                  AT+ L+     A   K G                RDP +A +LLE+ C   HGPSCFN AVM KKGD GV  D + F +YKA+T+ LV+  G +
Sbjct:   33 EFFAVVKTDHERAARIFQRNCDEGNYGSSCFSMARFHITGKGAEQDDAKAFAYFEKACKHGHAPGCYHAGLLKRSGVGTAPNLPSAMKDFTVACQDPGNIPEACYEMATQFLKARDAVAEPKKGGWLPGWLGGGGGDKPIERDPVKALKLLERGCERGHGPSCFNAAVMYKKGDTGVAPDPEKFARYKAETQRLVKVHGSV 233
[Close]
BLAST of mRNA_S-ischiensis_contig8.19539.1 vs. uniprot
Match: A0A7S2DAY3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DAY3_9STRA)

HSP 1 Score: 132 bits (333), Expect = 2.860e-32
Identity = 101/237 (42.62%), Postives = 130/237 (54.85%), Query Frame = 2 
Query:  110 LDEDYEERMLQFEIDCNAGKGNPVACHQAGEYLSVVRGEHSKAARLFKDNCHANGH-APSCFNYGRALLTGKGMKPSDSAAVQAFEQACEGGHAAACYHLGLLLQSGCDGVRKDPARAENVXXXXXXXXXXXXXXXXATRLLRGSKGAAGGAKAGAXXXXXXXXXXXXXXXRDPPRARRLLEQACANNHGPSCFNLAVMLKKGDEGVPRDEKLFQQYKAKTEALVREMGGLTGKKVA 817
            +++DY+ RMLQFEIDCN GKG   ACH  GE+ +VV  +H+ AA++ + NC    H  PSCF  GR LLTGKG+  +D+ A + F  AC+ G   AC+HLG LL  G   V++DP RA   XXXXXXXXXXXXXXXX                            XXXXXX                        LAVM + GD GV +D++ ++ Y+ KTE LVR+ G + G +VA
Sbjct:    9 VNDDYKNRMLQFEIDCNDGKGTGYACHSVGEFHAVVNKDHASAAKVLELNCDGKNHYGPSCFKLGRLLLTGKGVGQTDAGAERRFMSACDLGVTQACHHLGSLLLEGSAEVKRDPERAHKYXXXXXXXXXXXXXXXXXXXXXX----------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAVMFRNGDTGVLKDDEKYRSYRQKTEELVRQRGAMMGVQVA 223
[Close]
BLAST of mRNA_S-ischiensis_contig8.19539.1 vs. uniprot
Match: A0A024FSW8_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FSW8_9STRA)

HSP 1 Score: 129 bits (323), Expect = 1.130e-30
Identity = 86/236 (36.44%), Postives = 128/236 (54.24%), Query Frame = 2 
Query:  110 LDEDYEERMLQFEIDCNAGKGNPVACHQAGEYLSVVRGEHSKAARLFKDNCHANGHAPSCFNYGRALLTGKGMKPSDSAAVQAFEQACEGGHAAACYHLGLLLQSGCDGVRKDPARAENVXXXXXXXXXXXXXXXXATRLLRGSKGAAGGAKAGAXXXXXXXXXXXXXXXRDPPRARRLLEQACANNHGPSCFNLAVMLKKGDEGVPRDEKLFQQYKAKTEALVREMGGLTGKKVA 817
            ++++ E+R  +F  +C+ G+G+P+ACH  GE+L+VV  +++ AA +++ NC    +A SCFN GR +L GKG++ +D  A++ FE++C   H                            XXXXXXXXXXXXXXXX                                  RDP RA++   +AC  N  P+C+NLAVM K GD GV ++EK++++YK KTE LV++  G+ G KVA
Sbjct:   19 VNQEIEDREHEFRANCDDGEGDPMACHSWGEWLTVVEKDYTSAANVYRKNCEEKCYAASCFNLGRLMLAGKGVEENDEKALELFERSCAKKHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------DPPAMENGEQSELLQRDPIRAKKYYAKACDANFAPACYNLAVMFKNGDTGVEKNEKMYEEYKKKTEQLVKQAKGMLGVKVA 239
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19539.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQ53_ECTSI3.350e-6346.84Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S1UIG9_9STRA2.640e-4739.83Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7R9UGB8_9STRA3.060e-4640.95Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
W7TNA5_9STRA4.000e-4237.08Hcp beta-lactamase-like protein n=2 Tax=Monodopsid... [more]
A0A7S3MAS8_9STRA2.530e-4035.43Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
F0WJI5_9STRA3.130e-3940.69Hcp betalactamaselike protein putative n=1 Tax=Alb... [more]
F0Y0E8_AURAN8.220e-3435.71Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S1XZ45_9STRA1.230e-3337.31Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2DAY3_9STRA2.860e-3242.62Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A024FSW8_9STRA1.130e-3036.44Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:2049408..2054752 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score213.0
Seed ortholog evalue1.6e-52
Seed eggNOG ortholog2880.D7FQ53
Preferred nameCOA7
KEGG rclassRC00063,RC02819
KEGG koko:K00772,ko:K18180
KEGG ReactionR01402
KEGG Pathwayko00270,ko01100,ko04714,map00270,map01100,map04714
KEGG ModuleM00034
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464
EggNOG free text desc.Sel1 repeat
EggNOG OGsCOG0790@1,KOG4014@2759
EC2.4.2.28
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03029
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionTetratricopeptide-like helical domain
Ec32 orthologEc-01_007450.1
Exons6
Model size1506
Cds size750
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19539.1prot_S-ischiensis_contig8.19539.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig8 2049478..2054066 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817287.5206673-UTR-S-ischiensis_contig8:2049407..20494771622817287.5206673-UTR-S-ischiensis_contig8:2049407..2049477Schizocladia ischiensis KU_0333UTRS-ischiensis_contig8 2049408..2049477 +
1695740997.64861-UTR-S-ischiensis_contig8:2049407..20494771695740997.64861-UTR-S-ischiensis_contig8:2049407..2049477Schizocladia ischiensis KU_0333UTRS-ischiensis_contig8 2049408..2049477 +
1622817287.6053343-UTR-S-ischiensis_contig8:2054066..20547521622817287.6053343-UTR-S-ischiensis_contig8:2054066..2054752Schizocladia ischiensis KU_0333UTRS-ischiensis_contig8 2054067..2054752 +
1695740997.7460554-UTR-S-ischiensis_contig8:2054066..20547521695740997.7460554-UTR-S-ischiensis_contig8:2054066..2054752Schizocladia ischiensis KU_0333UTRS-ischiensis_contig8 2054067..2054752 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817287.533088-CDS-S-ischiensis_contig8:2049477..20495391622817287.533088-CDS-S-ischiensis_contig8:2049477..2049539Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 2049478..2049539 +
1695740997.6644247-CDS-S-ischiensis_contig8:2049477..20495391695740997.6644247-CDS-S-ischiensis_contig8:2049477..2049539Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 2049478..2049539 +
1622817287.5467553-CDS-S-ischiensis_contig8:2050158..20503371622817287.5467553-CDS-S-ischiensis_contig8:2050158..2050337Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 2050159..2050337 +
1695740997.6759312-CDS-S-ischiensis_contig8:2050158..20503371695740997.6759312-CDS-S-ischiensis_contig8:2050158..2050337Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 2050159..2050337 +
1622817287.5579307-CDS-S-ischiensis_contig8:2050594..20506451622817287.5579307-CDS-S-ischiensis_contig8:2050594..2050645Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 2050595..2050645 +
1695740997.69584-CDS-S-ischiensis_contig8:2050594..20506451695740997.69584-CDS-S-ischiensis_contig8:2050594..2050645Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 2050595..2050645 +
1622817287.5700579-CDS-S-ischiensis_contig8:2051050..20511331622817287.5700579-CDS-S-ischiensis_contig8:2051050..2051133Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 2051051..2051133 +
1695740997.7091184-CDS-S-ischiensis_contig8:2051050..20511331695740997.7091184-CDS-S-ischiensis_contig8:2051050..2051133Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 2051051..2051133 +
1622817287.5809784-CDS-S-ischiensis_contig8:2052585..20528721622817287.5809784-CDS-S-ischiensis_contig8:2052585..2052872Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 2052586..2052872 +
1695740997.7220979-CDS-S-ischiensis_contig8:2052585..20528721695740997.7220979-CDS-S-ischiensis_contig8:2052585..2052872Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 2052586..2052872 +
1622817287.5921814-CDS-S-ischiensis_contig8:2053978..20540661622817287.5921814-CDS-S-ischiensis_contig8:2053978..2054066Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 2053979..2054066 +
1695740997.734902-CDS-S-ischiensis_contig8:2053978..20540661695740997.734902-CDS-S-ischiensis_contig8:2053978..2054066Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 2053979..2054066 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig8.19539.1

>prot_S-ischiensis_contig8.19539.1 ID=prot_S-ischiensis_contig8.19539.1|Name=mRNA_S-ischiensis_contig8.19539.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=250bp
MGFREAHNGRMEPLDEDYEERMLQFEIDCNAGKGNPVACHQAGEYLSVVR
GEHSKAARLFKDNCHANGHAPSCFNYGRALLTGKGMKPSDSAAVQAFEQA
CEGGHAAACYHLGLLLQSGCDGVRKDPARAENVLDRACHGGSAEACYALA
TRLLRGSKGAAGGAKAGASTAAAAAAAAAAAAERDPPRARRLLEQACANN
HGPSCFNLAVMLKKGDEGVPRDEKLFQQYKAKTEALVREMGGLTGKKVA*
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mRNA from alignment at S-ischiensis_contig8:2049408..2054752+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig8.19539.1 ID=mRNA_S-ischiensis_contig8.19539.1|Name=mRNA_S-ischiensis_contig8.19539.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=5345bp|location=Sequence derived from alignment at S-ischiensis_contig8:2049408..2054752+ (Schizocladia ischiensis KU_0333)
CTGGCAGTTGAAGACTGAGTGCATCTGGTGGAGCGCAGGACAGCAAGACA
CTGAGCTGCAGGACAGTTGCATGGGCTTTCGTGAAGCACACAACGGAAGA
ATGGAGCCGTTGGACGAAGACTACGAGGAGCGGTGCGTAGGTCCTCAATG
ACAGTGTCGGCATGTTTCGTTGCAAGCCTACTGTAGAGGTGTTGCGCCTC
GCGGCTGCCTCGCCCCTTTCCCTTCCGGTCGTTTCTGATTGCGCAAATAC
TTGTCGTACAGTTGCTGCTGTGAGCCTGTCGACTGCCGTGGTGCAGCTGC
GTGGGCCATCCGGTTTGCCCTAAATCGCTTGGAAGTACTGCGCCCGTTGC
TAGCCGGCTGGTGGCAAGGTGTGTGCAAGGGGATAGTAAAAAATAACCAG
GAGCACTACGTTCCAGCACTGTGCTGAAAACTGTGAATCCGCAGTGGACG
ACACGTCGGTTCCCTAAAGCCGGATGACAAGGCCACTTCGAGTGCCACTA
CTATGCTGCAGTAGCTACTTGCCTTTGTGTGTTGCGTCATCTAGTCTTTT
GACAACCCCTGCACTGCACCATGTCAGGTGGCATCTAATATGTACTAGGC
CAGCTGGGATGGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGCACTTGAGG
GGAAGTTGGAAAGAACACGCAGGAGTATCGCAGGCCGGTACTGCGCTGAA
TGTGCGGACCCCCCATGACCTCAGCGCGCCGCCCCCGTGCACCCTGCGCA
GCATGCTTCAATTTGAGATCGACTGCAATGCGGGCAAAGGAAACCCGGTG
GCGTGCCACCAGGCCGGCGAGTACTTGTCCGTCGTTCGAGGGGAGCACAG
CAAGGCAGCCAGGTTGTTCAAGGACAACTGCCATGCCAACGGGCACGCGC
CGTCCTGTTTCAACTACGGCAGGGCATTATGTGAGAAGACCCGTCTTCTC
CGCGCGTCTGGTGCCTATTTCTTGGCGTCTCATCATTTTACTTGTCTCTC
TGTGCCCATGCTCTGAGTGCTGGTTCTCCTCGCCTCTCCGCCGAGAATTT
TGCCAACTTTTGCAGTAAGCAACGCTTGCAGCACCACAGCACCGGCTGGC
CAGTTGATCCCCCGTTGCCCGTTACAGTCCGGCTGACAACGACGCCTCCC
GTTGTGTAACAATGCCCCTGCAACATGATTCTCGCAGTGACGGGCAAGGG
GATGAAGCCGAGCGACAGCGCCGCGGTCCAAGCTTTCGGTGCGTCAAGGA
ACGGGCCAAAAATCTGGGGGCGTCTGCATGCACACCCGCAGCCCAATGGC
TGGACCTCGCCCCACCCCCGCTGCGTGGATCCCGCCCCTGCGATGATGCC
CTTTCTGCCGCAACGGTCGTGACCCCGCCTCCTGCGGCTGCGCGCGATCG
GAGCGTGAGGGGGAAACGACCGAGGCAGGCGCGTCTGCTTGCTCGGATAT
TTCCCTCGCGAACCGGCGCCTGTTTCTACGTACTCGAGTCCCGCATTTGG
TCGTAGACCCGTCCGAGGTTTGCCAGACGGGGCGCAGAGGCCTTTGCAAG
TACCGGGGAGGCGAGACCCGGCGGGCCAGTCCCCTTTTCTTTATGGCTGA
CCGCGCCCCCCACCGTGCCGTCCCGCCGACTCACCCGCGCCAGAGCAAGC
TTGTGAAGGGGGTCACGCGGCCGCATGCTATCACCTGGGGCTGCTGCTGC
AGAGCGGATGCGACGGTGTCAGGAAGGTGTGCCCCCCCCGGCGGCCTCTT
ATGCGCTGTAATGACGGATGCCTGCTGCAGCCTCGTTGTCTCGAGCCGCT
TGCGTTTTAAGCACTGCAGGGGGCTTATTGTGCTCTGTGGGGGAGGGGGG
AGGGGGTCTCAACATTGATGCTTCTTGCGAGTGTTGCTCCCATCGCCCAA
GAGGCTCCCCCGGGGGGGGGGGGTCTCTGGTGTGCCGCAAGCGCAAAAAA
CGCGTGTGCTGTGAAGTAAACACGCATATACATTAGGTAATGTGTACGTG
CTTCGAAGCATAATACTGCCAAGTAGGTGTCCCAACTATCCTACTGACAG
CAAGTACTTCCAACCACTCGAGTACCACCATGTAGTACGCCTGATACGGC
ACGGTACACGCTTCCAAGTAGCACTTCTACTTGATTGAGCTTGTCGTATG
TGTATTTCGAGGTGGTCACTACTGCTCTGCAAACTGACGCACTCTGCAGC
ATTGACAAGAACGAAACCCCAGTAGAGTAGGCGAGGTGCAGACCACGTCA
AACTTCTGTACGTAAAACCCCATGTTGTTACTGCTAGTACTGTACTGTAC
TTGCGCTGTTGCTATAGTACTACTGTTGTACTTCGTATTTGGAAGTACAG
TACTTAGCGCTTCAAAATACGTAGGAGTACTCAAAATTCGATCCAAGGTC
GTGCGTACTTGCCTCAGGCTCACTTCTGGACCGCGCTGCCAGGTGATGTC
TGGAGGACGTCGACGACAGGCAATTCACCCCACCTAGCTACTTACTGCAA
ATGCTTGGTCCTCCAGGTACCCTACGTGGGTAAAAATCACCACACCTAGC
TAATGTATCCCAGGCAAACAATAGGGAAACTGCACAACGGGGGCGACCCG
AGCGTTGCTTCATGCTGGCCAACGCTCTCTGGTCCTCACTAAAGGCACAA
GGAGAGCAACTACTTTATGAGCACGGCACATGTGTCACACGGTGGCAATA
CCTGCAGCGCGCGGGCGTGCATACATGCACGCGTCTCCTGTGTCCGAAGT
GCTACGCACGTACTCGAGTACTGTGTACAAGTGGAGTACTCTGTAGTACT
TGTAATCACTTTGTACTGTAGAGTAGGTGTGGCAGTACTGTACTGTAGCA
CCTCCGAGCGCAGCCCCGTCGAGCAGTGCGAAGCGCAGCCCTTGTTGGTG
TGCGCATGCATGCACGCGCACACGTATCTGCCGTGTCTGAAGCACCGTGG
CATACTGTACCTGCAGCACGCACGTAGTACAGCACTTGCAAGCACTGCAC
GGCATGGTGCTCTGACGTTGATTGCAAACTACAGTAAAATCGAGCTTACG
TGCCCCCGCATGCCCACAGCTGCAGCACAAGCACACGCACACACCTTGAG
AAAATCACAGAACCCACCGTCCTAACCCCCCCCCGCCCCTGCCCCCGACC
CGCCCGCCCTCCTTCCGGCACCCACAAGGACCCCGCCCGCGCAGAAAACG
TCCTCGATCGAGCGTGTCACGGCGGGTCCGCAGAGGCATGCTACGCGCTG
GCGACACGCCTCCTCCGGGGAAGCAAGGGGGCGGCGGGGGGGGCGAAGGC
AGGGGCGTCCACGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCAG
AACGGGACCCGCCGCGGGCGCGGCGCCTCCTGGAGCAGGCGTGCGCGAAC
AACCACGGGCCCTCGTGCTTCAACCTGGCCGTAATGCTGAAGAAGGGCGA
CGAGGGCGTGCCGAGGTGGGGGCATGGCAAGCCTTGACGTGGCTGCAGGG
GGGCTCTATTGTTGGAAGGGCCGCGTGCGTGCGTGTATGGTCAATGGTCT
CCGGGCTAGGCGAGGCAAGCACAAATGGTAGTCAGCACGATTACAGTACT
CGTAGGTCTAAACAGTCCGAGGGACTACGGCAAGCACAATGTGAGTAGAG
TACATACCTGTAGTAGTATATACATAGTCCGAGGTTTGCTTCTCAGTACA
TATTGCACTTTACTTAGCTGCAAGGTGCGTGTGCAGACGGTCCCCAAGGT
GAGGCAAGCGCATGTGTGTACGAGTACAGTACACACTTTGAGGTACAGTA
TACACGCGTACCGGTACTGTGTGTGTAGCTGCAAGGAGAGGGGTTATCGG
GCGGGCGGGTGGGTGGACAGAACCCGCTAAGCTTACCCAGCTCTTTGGCA
TGCGGGGCCTCCACGAGGAGGGTCTCCCTCTCCGGCTCCGCGCCGTGAAA
TTGGTTGGCTCGCTGGATGAACGCTTGAGCTTGCTGTGACGGACTGTATT
TTGCCCATGCATCGCTTTTTCCAAGCACTGTGATCCATGGTGCGAGTGCT
GCTTATTGTGCTGAGCTCTTACAGTAGGTATAGTAGGCAACACTGGATAC
GACCGCAAGTACTTGGTGAGAGAACGAGGGCACACAAAGTCCAAAGGCTT
AAAGAATATCGAGGTCTGCTCAAGTCTGATTCCTGGTGCCAGCCCCTTCT
GTCCTTGCACGGCTCCGCACACTGTATTTATATGGGGTACTTGGAAGTGC
GGGTATACGAGTATATATATATATATATACTCGAGCACATATACTTCAAG
TATATGTATTTCATCTCGGGTACTCGCATTGTGCTTGCCATATGTAGCCT
GGAGACCGTTGACCACGGTCCCTCTTCTGAGTCCGGGCACCCTGCTCGTA
CTTCCAGAAACGTATACTAAGTACTTCCAAGCACCTTTCTTCATTTCCCG
CGCCTTCGGAAAAGTAGTGCTTTTCTATGCTCGCCAACCTCAGCCTACCC
CCCCCCCCACACACACACCACACGTCCACCGGGCGACGACCCTCCCCGTT
GCCGCGCTCTGCGCCCCCCAGGGACGAGAAACTGTTCCAGCAGTACAAGG
CAAAGACGGAAGCGCTGGTGAGAGAGATGGGGGGGCTGACCGGCAAAAAG
GTTGCGTGAGGGCGCTGCCTCTACTGTACTGCACTGGACTGGACTGGACT
GGACTACTGTACTTCGAAGTACTTCACAGCAAGATTGGAGCGTGCACCCA
ACTGCACTTGCGCAGTGAGTGAGCGATTCCGGCTTTTGGCGCTCTCAGGG
CTTGGACAAGCCGGACCAGCTACTTGGCTCCTCCAGGGTTCGCACTTAGG
GGTTAATTAGGGCCTAATTAGCCTTCATTTTAGGTCTAATTACCCCTCAT
TAGCTCTAGCTAAGGGCCTAAAAGGGACCACTTAGGGGCTAAGTGCCAAC
CCTGGGCTCCTCATCTCTGGGGGGGGGCTCAGGTGTTGGCAAGGGGGCAG
GACGCCCACAACTGAGTGCAACTGCAGTAGAATCATTTCACCGGTGTGTT
CGGTATGCCAGAAGGCATGAGGGGCAAGAAGAGCTGTGGCTGTAGGCTAC
AAAAGCGCTTCCTCCGTGCAAAAAGGTGTGATTTGATTGATGGTCGAAGC
GCGGCCCTTCTGCTGCCGCTTCGCCGTGGTGGGCGGTGCGATTTGCGCTG
CAATGCTTTTTGTTGTCTTTTATCCTGTGGTGATTCATATAAAATGTTTT
TGTGCCCTGCGGGTGAAAAGAAGGGCTTCTGGTGAGGTCCCCACCTTAGG
TTGTTGGGACGGGGCCCGGAACTCGCATGCCATCAAAATAATTAA
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Coding sequence (CDS) from alignment at S-ischiensis_contig8:2049408..2054752+

>mRNA_S-ischiensis_contig8.19539.1 ID=mRNA_S-ischiensis_contig8.19539.1|Name=mRNA_S-ischiensis_contig8.19539.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1500bp|location=Sequence derived from alignment at S-ischiensis_contig8:2049408..2054752+ (Schizocladia ischiensis KU_0333)
ATGGGCTTTCGTGAAGCACACAACGGAAGAATGGAGCCGTTGGACGAAGA
CTACGAGGAGCGATGGGCTTTCGTGAAGCACACAACGGAAGAATGGAGCC
GTTGGACGAAGACTACGAGGAGCGCATGCTTCAATTTGAGATCGACTGCA
ATGCGGGCAAAGGAAACCCGGTGGCGTGCCACCAGGCCGGCGAGTACTTG
TCCGTCGTTCGAGGGGAGCACAGCAAGGCAGCCAGGTTGTTCAAGGACAA
CTGCCATGCCAACGGGCACGCGCCGTCCTGTTTCAACTACGGCAGGGCAT
TATCATGCTTCAATTTGAGATCGACTGCAATGCGGGCAAAGGAAACCCGG
TGGCGTGCCACCAGGCCGGCGAGTACTTGTCCGTCGTTCGAGGGGAGCAC
AGCAAGGCAGCCAGGTTGTTCAAGGACAACTGCCATGCCAACGGGCACGC
GCCGTCCTGTTTCAACTACGGCAGGGCATTATTGACGGGCAAGGGGATGA
AGCCGAGCGACAGCGCCGCGGTCCAAGCTTTCGTGACGGGCAAGGGGATG
AAGCCGAGCGACAGCGCCGCGGTCCAAGCTTTCGAGCAAGCTTGTGAAGG
GGGTCACGCGGCCGCATGCTATCACCTGGGGCTGCTGCTGCAGAGCGGAT
GCGACGGTGTCAGGAAGAGCAAGCTTGTGAAGGGGGTCACGCGGCCGCAT
GCTATCACCTGGGGCTGCTGCTGCAGAGCGGATGCGACGGTGTCAGGAAG
GACCCCGCCCGCGCAGAAAACGTCCTCGATCGAGCGTGTCACGGCGGGTC
CGCAGAGGCATGCTACGCGCTGGCGACACGCCTCCTCCGGGGAAGCAAGG
GGGCGGCGGGGGGGGCGAAGGCAGGGGCGTCCACGGCGGCGGCGGCGGCG
GCGGCGGCGGCGGCGGCGGCAGAACGGGACCCGCCGCGGGCGCGGCGCCT
CCTGGAGCAGGCGTGCGCGAACAACCACGGGCCCTCGTGCTTCAACCTGG
CCGTAATGCTGAAGAAGGGCGACGAGGGCGTGCCGAGGACCCCGCCCGCG
CAGAAAACGTCCTCGATCGAGCGTGTCACGGCGGGTCCGCAGAGGCATGC
TACGCGCTGGCGACACGCCTCCTCCGGGGAAGCAAGGGGGCGGCGGGGGG
GGCGAAGGCAGGGGCGTCCACGGCGGCGGCGGCGGCGGCGGCGGCGGCGG
CGGCGGCAGAACGGGACCCGCCGCGGGCGCGGCGCCTCCTGGAGCAGGCG
TGCGCGAACAACCACGGGCCCTCGTGCTTCAACCTGGCCGTAATGCTGAA
GAAGGGCGACGAGGGCGTGCCGAGGGACGAGAAACTGTTCCAGCAGTACA
AGGCAAAGACGGAAGCGCTGGTGAGAGAGATGGGGGGGCTGACCGGCAAA
AAGGTTGCGTGAGGACGAGAAACTGTTCCAGCAGTACAAGGCAAAGACGG
AAGCGCTGGTGAGAGAGATGGGGGGGCTGACCGGCAAAAAGGTTGCGTGA
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