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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 837 |
| Cds size | 420 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817267.135749-UTR-S-ischiensis_contig8:1847991..1848310 | 1622817267.135749-UTR-S-ischiensis_contig8:1847991..1848310 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig8 1847992..1848310 + |
| 1695740981.3004277-UTR-S-ischiensis_contig8:1847991..1848310 | 1695740981.3004277-UTR-S-ischiensis_contig8:1847991..1848310 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig8 1847992..1848310 + |
| 1622817267.1479156-UTR-S-ischiensis_contig8:1849112..1849210 | 1622817267.1479156-UTR-S-ischiensis_contig8:1849112..1849210 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig8 1849113..1849210 + |
| 1695740981.31004-UTR-S-ischiensis_contig8:1849112..1849210 | 1695740981.31004-UTR-S-ischiensis_contig8:1849112..1849210 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig8 1849113..1849210 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817267.1592813-CDS-S-ischiensis_contig8:1849210..1849630 | 1622817267.1592813-CDS-S-ischiensis_contig8:1849210..1849630 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 1849211..1849630 + |
| 1695740981.3270335-CDS-S-ischiensis_contig8:1849210..1849630 | 1695740981.3270335-CDS-S-ischiensis_contig8:1849210..1849630 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 1849211..1849630 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig8.19506.1 >prot_S-ischiensis_contig8.19506.1 ID=prot_S-ischiensis_contig8.19506.1|Name=mRNA_S-ischiensis_contig8.19506.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=140bp
MTPPQRGPAMSAARHDMGDFSLAQGSGVVAAAAMADESAALGRVGSGGGE
GGGGGGGGIGAGGTVIVSMPAPPAATVAVAVEEEAATVASEAENASVRAS
LKRLGLHLGTPPPPPTVAEHLHAPNVGGRGGAGAGGDTLP back to topmRNA from alignment at S-ischiensis_contig8:1847992..1849630+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig8.19506.1 ID=mRNA_S-ischiensis_contig8.19506.1|Name=mRNA_S-ischiensis_contig8.19506.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1639bp|location=Sequence derived from alignment at S-ischiensis_contig8:1847992..1849630+ (Schizocladia ischiensis KU_0333)
GAACTATATCGAGGCTAATCAATCATCTTCGGTTCGATTAAAATCGAGGC
TGTCTTTCGGGTGAATAACACTTAAACCGTTAACGGCTTGAAAACTCGTT
CTTTGCTCCCGCGATCTCCCCCACCAAGGAGCAGGGGATGCACGGAGGGG
AAGACTCAAGAGAGAGCAGCGGTGGGACGGTGAGGCTCAAAGGGGACCAT
CGCAACGCCAGCCAGCTCCCCCAAGACAGCTTGGGGTGCGGAGCTGTGCA
AGTCTCTCTGAAAAGGGCCATCTGTCCGAGGACTGGGCCTGCGACCGCGG
ACGCGTGAAAGTTGGCAAGGTGACGGATGGGGCTCCACATGCTGACCCTG
CATCCTGCGTGCGCTTGTGACTGCTGTCGGCGTAACTGTTGTCGTGGGGG
GTTTACCACCTGGCCATCGGTCTTGTACTAAGCCCATCCCTGCGTCTCCG
ACAGCCGCGAGCAACCATGACACCCTTGAGGATTTTACTTCACCATCCGT
GCTTCGACTATTATGACACCCACACATCGCAGAACTCCCAGGCTCCGTAA
AAGGGAGCATCAGTTTGCCTGACTGGTGCTGGCCCACGGTTCTACTTGTT
GTGCCCTCAAGTCTCGCTGCCCGTCCTCTCTTGCCAGGGTGCGAAGTGCC
TACAAACCTTCCTGCTACCTGTATTTGTATTTGACTTCTGGGTGGTATGC
CTCAACTACAGCTTCCCCCCAGGAAGAACAAACGCCTGCAAGACCTGTCA
CACGCCACACCTCAAGGGGGGAGGCTACTTGGCACGCGTTTCACACACCA
CCGCGGTGCTATTTTGGCCGGTTGGGGGCCCGCCTGCCTTTGACTTCCAA
ATCTTAGCCGCTGACCACAGCACCCCAAAATCAGGGGAGAGTACAATCGT
GCTGCACCGACCATGTTGATATATTGCGTCGCCGCTGCAGCCCCCCCCCT
CGCACACGCCTGCCGGCAAACCAGCGTGGCCTACACCGACATTATCGGTG
AACCTTTCGTAGTAGCGCCTGATGCTGCATGTTCACCTTCTCAATGGCAA
CCTTTCGTAGTAGCGCCTGATGCTGCATGTTCACCTTCTCAATGGCGGTG
CCCCTCCCGTGACACGTACAGTAGTGCGGAGCACTCGCGAAGCACACCCG
CTGCCACGCCGGCGGCTGCCTGCCAACAGTCCAAGCAGGGGCAGGCGTTC
GTCGAGCAGCCATGACCTGATGACGCCACCACAGCGGGGCCCCGCAATGA
GCGCCGCCCGGCATGATATGGGAGACTTTTCCCTGGCCCAGGGCTCCGGG
GTCGTGGCCGCGGCCGCCATGGCCGACGAGTCGGCTGCCCTGGGACGCGT
TGGCAGCGGCGGCGGCGAAGGCGGCGGCGGCGGCGGCGGCGGCATCGGGG
CCGGGGGCACTGTGATCGTGTCAATGCCCGCCCCGCCAGCGGCGACGGTG
GCGGTGGCGGTGGAGGAGGAGGCGGCGACGGTGGCCAGCGAGGCCGAGAA
CGCGTCCGTACGCGCTTCACTTAAGCGGCTGGGCCTGCACCTTGGGACGC
CGCCGCCACCGCCAACCGTAGCGGAGCACTTGCACGCTCCTAACGTTGGT
GGACGTGGTGGCGCTGGGGCCGGGGGGGATACCCTTCCC back to topCoding sequence (CDS) from alignment at S-ischiensis_contig8:1847992..1849630+ >mRNA_S-ischiensis_contig8.19506.1 ID=mRNA_S-ischiensis_contig8.19506.1|Name=mRNA_S-ischiensis_contig8.19506.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=840bp|location=Sequence derived from alignment at S-ischiensis_contig8:1847992..1849630+ (Schizocladia ischiensis KU_0333)
ATGACGCCACCACAGCGGGGCCCCGCAATGAGCGCCGCCCGGCATGATAT
GGGAGACTTTTCCCTGGCCCAGGGCTCCGGGGTCGTGGCCGCGGCCGCCA
TGGCCGACGAGTCGGCTGCCCTGGGACGCGTTGGCAGCGGCGGCGGCGAA
GGCGGCGGCGGCGGCGGCGGCGGCATCGGGGCCGGGGGCACTGTGATCGT
GTCAATGCCCGCCCCGCCAGCGGCGACGGTGGCGGTGGCGGTGGAGGAGG
AGGCGGCGACGGTGGCCAGCGAGGCCGAGAACGCGTCCGTACGCGCTTCA
CTTAAGCGGCTGGGCCTGCACCTTGGGACGCCGCCGCCACCGCCAACCGT
AGCGGAGCACTTGCACGCTCCTAACGTTGGTGGACGTGGTGGCGCTGGGG
CCGGGGGGGATACCCTTCCCATGACGCCACCACAGCGGGGCCCCGCAATG
AGCGCCGCCCGGCATGATATGGGAGACTTTTCCCTGGCCCAGGGCTCCGG
GGTCGTGGCCGCGGCCGCCATGGCCGACGAGTCGGCTGCCCTGGGACGCG
TTGGCAGCGGCGGCGGCGAAGGCGGCGGCGGCGGCGGCGGCGGCATCGGG
GCCGGGGGCACTGTGATCGTGTCAATGCCCGCCCCGCCAGCGGCGACGGT
GGCGGTGGCGGTGGAGGAGGAGGCGGCGACGGTGGCCAGCGAGGCCGAGA
ACGCGTCCGTACGCGCTTCACTTAAGCGGCTGGGCCTGCACCTTGGGACG
CCGCCGCCACCGCCAACCGTAGCGGAGCACTTGCACGCTCCTAACGTTGG
TGGACGTGGTGGCGCTGGGGCCGGGGGGGATACCCTTCCC back to top
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