mRNA_S-ischiensis_contig8.19499.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig8.19499.1 vs. uniprot
Match: D7FK42_ECTSI (DNA-directed DNA polymerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK42_ECTSI) HSP 1 Score: 461 bits (1185), Expect = 1.340e-139 Identity = 265/511 (51.86%), Postives = 330/511 (64.58%), Query Frame = 1
Query: 97 RCMALAKALVGQLRAAGCEDAFRTIEMPAVPVLAAMEVAGMVFLPHRLVRLENDVAARLETLRREACAAAGGPEFNLASPEQVAEVLFTRLDLPAPPTKKGTKHPSTSEEVLEGLADKHPAAAAILEFRGLNKLKTTYLGRLGTHAVPAGAAATAAAGILTQGMEAARVHAQWHQTSVRTGRLSCSRPNLQQIPKNSRGTLGTVGASIRRAFCAAKGYTLLAADYSQIEMRVLAHASEDRALLRLFSWDSG---GGXXXXGGDVYLLVAGKVLGKEEGQVTPQERDQFKRVCLGVVYGMGTAQVARQLGLEPPAASRMISQLMKAFPGFDSFVKAARRH-------------AREHGHVSTLGGRRRHLPEIL-SKDQAKRAQAERRAVNSAIQGTAADIIKAAMVLVEERLTQWRADGNAPGGQEADWEEERGGQGAGGARSRAPFPELLLQIHDELVFQCPARAEDLERLKALLQECMEEEAPRLLGLRCPLSINMSVGMSWGDMRPVV 1578
R +ALA + +L A A +EMPA+PVLA MEV+G+VFLP R+ R + + LE L+R A A GG +FNLASP+QVA+VLF L LP+PP K G+ H STS EVLEGL KH A ILEFRG+NK KTTY+ +L A+ GAAA +A +QG AAR+HA W+QTS RTGRLSCSRPNLQQ+PK S G G ++R AF A + +TL+AADYSQIEMRVLA A D L LF+ G G GGDVY +A +V KEE V+ +ER++ K VCLG+ YGMGT QVA++L + A ++ +KAFPG + F+ A RR+ ARE+G+V TL GRRRHLPEI S++ A +AQAER+AVNS +QGTAADI+K AMVLV RL WR+ P L++QIHDELV +CPA EDLERLK LL +CME EAP +LG++CPL++NM VGMSWG MR VV
Sbjct: 723 RNLALAGKISAELEGAKMLAACEQVEMPAIPVLAGMEVSGVVFLPERVTRFSDALGNHLEGLKRTAVKAVGGRDFNLASPDQVADVLFKHLKLPSPPVKAGSVHASTSAEVLEGLQGKHAVVAPILEFRGVNKYKTTYVDKLAERAL--GAAAAESAVPASQGAGAARIHATWNQTSARTGRLSCSRPNLQQMPKGSDPLAGVEGVNVRDAFSATRSFTLMAADYSQIEMRVLADACRDPGLRNLFATLGGTNDAGASTGGGDVYRKLAAQVFAKEEHGVSDEERNRAKVVCLGITYGMGTPQVAKKLEITESQAQGLVRSFLKAFPGIEPFMAATRRYGTPCRHQISQRRFARENGYVCTLTGRRRHLPEINNSRNAAAKAQAERQAVNSVVQGTAADIMKTAMVLVARRLDAWRSS----------------------LDEGLDCPRLIMQIHDELVLECPACEEDLERLKGLLADCMEVEAPAVLGIKCPLTVNMLVGMSWGSMRRVV 1209
BLAST of mRNA_S-ischiensis_contig8.19499.1 vs. uniprot
Match: A0A7S2LIW8_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LIW8_9STRA) HSP 1 Score: 293 bits (749), Expect = 9.450e-84 Identity = 191/482 (39.63%), Postives = 260/482 (53.94%), Query Frame = 1
Query: 145 GCEDAFRTIEMPAVPVLAAMEVAGMVFLPHRLVRLENDVAARLETLRREACAAAGGPEFNLASPEQVAEVLFTRLDLPAPP------TKKGTKHPSTSEEVLEGLADK--HPAAAAILEFRGLNKLKTTYLGRLGTHAVPAGAAATAAAGILTQGMEAARVHAQWHQTSVRTGRLSCSRPNLQQIPKNSRGTLGTVGASIRRAFCA-AKGYTLLAADYSQIEMRVLAHASEDRALLRLFSWDSGGGXXXXGGDVYLLVAGKVLGKEEGQVTPQERDQFKRVCLGVVYGMGTAQVARQLGLEPPAASRMISQLMKAFPGFDSFVKAARRHAREHGHVSTLGGRRRHLPEILSKDQAKRAQAERRAVNSAIQGTAADIIKAAMVLVEERLTQWRADGNAPGGQEADWEEERGGQGAGGARSRAPFPELLLQIHDELVFQCPARAEDLERLKALLQECMEEEAPRLLGLRCPLSINMSVGMSWGD 1563
G D+ IE P VL+AME G+ FLPH +E + R+E L EA AG F +SP+QVA++L+ L LP P ++H STSE +LE + H +LEFR LNKL T+Y+ L P A R+H W QT+VRTGRLSC +PN+QQIPK+S T + R AFCA A L + DYSQ E+R+LAH SED+ L+ LF G D+Y ++ V GK VT +ER K+V L ++YGMG +QV+++LG+ A + F ++ + A++ G V+T+ GRRR+L EI S D AKRAQAER+AVNS IQG+AAD++K AM+ + R+T W +G++ GG P +LLQIHDEL+F+ +D++RLK + C EE L L+ PL +N SVG SWGD
Sbjct: 126 GLADSLDQIEGPLQSVLSAMECIGVGFLPHTYQNIEQRLDNRIEELSLEARNIAGNNSFLCSSPQQVAQLLYDVLKLPVPKDTMPRTATTSSQHRSTSEAILEAIKSSTPHRIIDILLEFRSLNKLLTSYIKPL-----PFLARKPYLREASLSSKPIVRIHPMWMQTAVRTGRLSCRKPNMQQIPKDS-----TFDVAPRDAFCATAHDMCLFSFDYSQNEVRILAHMSEDQQLISLF-------LNKDGLDIYKQMSSLVTGKTVDSVTIEERAITKQVVLAILYGMGISQVSKKLGINRSKAQHFFNSFFARFKQTRRWIDMTKESAKKLGFVTTIVGRRRYLDEIRSNDSAKRAQAERQAVNSVIQGSAADLMKLAMLKIGSRITDWHKEGHSAGG-------------------TGRHPRMLLQIHDELLFEIANNKDDIQRLKDAIICCCAEECELDLKLKVPLKVNCSVGSSWGD 571
BLAST of mRNA_S-ischiensis_contig8.19499.1 vs. uniprot
Match: B8C4R5_THAPS (DNA polymerase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C4R5_THAPS) HSP 1 Score: 277 bits (709), Expect = 5.210e-79 Identity = 176/478 (36.82%), Postives = 255/478 (53.35%), Query Frame = 1
Query: 169 IEMPAVPVLAAMEVAGMVFLPHRLVRLENDVAARLETLRREACAAAGGPEFNLASPEQVAEVLFTRLDLPAPP--TKKGTKHPSTSEEVLEGL-----ADKHPAAAAILEFRGLNKLKTTYLGRLGTHAVPAGAAATAAAGILTQGMEAARVHAQWHQTSVRTGRLSCSRPNLQQIPKNSRGTLGTVGASIRRAFCAAKGYT--LLAADYSQIEMRVLAHASEDRALLRLFSWDSGGGXXXXGGDVYLLVAGKVLGKEEGQVTPQERDQFKRVCLGVVYGMGTAQVARQLGLEPPAASRMISQLMKAFPGFDSFVKAARRHAREHGHVSTLGGRRRHLPEILSKDQAKRAQAERRAVNSAIQGTAADIIKAAMVLVEERLTQWRADGNAPGGQEADWEEERGGQGAGGARSRAPFPELLLQIHDELVFQCPARAEDLERLKALLQECMEEEAPRLLGLRCPLSINMSVGMSWGDMRPV 1575
IE P +LAAME G+ F P+ L R E R+E L +A F L+SP+Q++ L+ L + P +K STSEE L+ L HP ILEFR LNKL TTY+ L T +P R+H QW + +VRTGRLSC +PNLQQ+PK+ GAS+RR+F +K T L A DYSQ E+R+LAH S D+AL+ LF D+ D+Y ++ + K +T QER QFK+V L ++YGM QVA++L + A +M++ + F G ++++ + AR + +V T+ GRRR+L I S D +AQAER+A+N+ IQG+AAD++K +M+ + E L +W+ D ++ G SR P +LLQIHDELV + D+ RL+A+ + + + L+ PL + S GMSW M+ +
Sbjct: 75 IEAPVQSILAAMECRGVAFYPNHLKRNEAQANERIEALEAQARTITNDSSFLLSSPQQISNYLYDILKMKVPSGLVQKTKSQRSTSEETLQALKAASNGSPHPIIDVILEFRTLNKLLTTYIKPLPTFCLPQ------------------RIHPQWSECAVRTGRLSCRQPNLQQVPKDD-------GASVRRSFVPSKKETMCLFACDYSQKEVRILAHMSGDKALISLFQMDANV-------DIYKQMSSLIRNKPVESITAQERAQFKQVTLALLYGMSPNQVAKKLNITKSQAIQMMNDFFRRFQGVKNWMEDTKEFARRNHYVVTIAGRRRYLDGIDSDDNGAKAQAERQAINTVIQGSAADLMKCSMINIAENLQRWQEDNSS-----------------NGTSSR---PRILLQIHDELVLELNFVETDIRRLQAIATKSLTRDCEEYFHLKVPLLLTCSCGMSWHGMKAI 500
BLAST of mRNA_S-ischiensis_contig8.19499.1 vs. uniprot
Match: A0A349UN33_9BACT (DNA polymerase I (Fragment) n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A349UN33_9BACT) HSP 1 Score: 271 bits (693), Expect = 5.550e-77 Identity = 192/499 (38.48%), Postives = 261/499 (52.30%), Query Frame = 1
Query: 82 ARDAERCMALAKALVGQLRAAGCEDAFRTIEMPAVPVLAAMEVAGMVFLPHRLVRLENDVAARLETLRREACAAAGGPEFNLASPEQVAEVLFTRLDLPAPPTKKGTKH-PSTSEEVLEGLADKHPAAAAILEFRGLNKLKTTYLGRLGT--HAVPAGAAATAAAGILTQGMEAARVHAQWHQTSVRTGRLSCSRPNLQQIPKNSRGTLGTVGASIRRAFCAAKGYTLLAADYSQIEMRVLAHASEDRALLRLFSWDSGGGXXXXGGDVYLLVAGKVLGKEEGQVTPQERDQFKRVCLGVVYGMGTAQVARQLGLEPPAASRMISQLMKAFPGFDSFVKAARRHAREHGHVSTLGGRRRHLPEILSKDQAKRAQAERRAVNSAIQGTAADIIKAAMVLVEERLTQWRADGNAPGGQEADWEEERGGQGAGGARSRAPFPELLLQIHDELVFQCPARAEDLERLKALLQECMEEEAPRLLGLRCPLSINMSVGMSWGDMR 1569
A DA+ + LA L QL++ G ++ F +EMP +PVLA ME G+ P +L R E ++ + LR + + AG P FN+ SP Q+ +VLF L LP KK TK PST EVLE LA H A +L++R L KL TYL L H+ RVH +HQ TGRLS S PNLQ IP + G IR AF A +G LL+ADYSQ+E+R+LAH ED LLR F+ D D++ +VA +V G +V P +R + K V G++YG +AR L + A IS K FP D F++A A+E+G+V T+ GRRR + EI +++ +RA AER A+NS +QG+AAD+IK AMV + R+ ER G+ + +LLQIHDELVF+ PA A D ER + EE + LR PL +++ VG +W D +
Sbjct: 55 AEDADVALRLADVLAPQLKSEGLDELFERLEMPLMPVLAEMERMGIRVDPQQLKRQEVELGREADALREKILSLAGRP-FNVDSPRQLTDVLFGDLGLPV---KKSTKTGPSTDSEVLEELAALHELPALVLDYRHLMKLIGTYLKALAECIHS------------------RTGRVHTSFHQAGTATGRLSSSDPNLQNIPIRTEQ-----GRHIRSAFVADEGCVLLSADYSQVELRMLAHFCEDPTLLRAFAEDR---------DIHRIVAAEVFGVPVAEVIPAQRARAKTVNFGIIYGQTAFGLARTLRIGRAEAGEFISAYKKRFPRIDEFLQACVAQAKENGYVETIFGRRRRIAEIDARNPQRRALAERLAINSVVQGSAADLIKQAMVRLAARI-------------------EREGRPS----------RMLLQIHDELVFELPAGAVDAERAMIV------EEMSGAIRLRVPLKVDVGVGPNWMDAK 482
BLAST of mRNA_S-ischiensis_contig8.19499.1 vs. uniprot
Match: A0A7R9VQU8_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VQU8_9STRA) HSP 1 Score: 271 bits (693), Expect = 6.540e-77 Identity = 176/493 (35.70%), Postives = 261/493 (52.94%), Query Frame = 1
Query: 145 GCEDAFRTIEMPAVPVLAAMEVAGMVFLPHRLVRLENDVAARLETLRREACAAAGGPEFNLASPEQVAEVLFTRLDLPAPP---TKK--GTKHPSTSEEVLEGLADKHPAAA-------AILEFRGLNKLKTTYLGRLGTHAVPAGAAATAAAGILTQGMEA-------ARVHAQWHQTSVRTGRLSCSRPNLQQIPKNSRGTLGTVGASIRRAFCAAKGYTLLAADYSQIEMRVLAHASEDRALLRLFSWDSGGGXXXXGGDVYLLVAGKVLGKEEGQVTPQERDQFKRVCLGVVYGMGTAQVARQLGLEPPAASRMISQLMKAFPGFDSFVKAARRHAREHGHVSTLGGRRRHLPEILSKDQAKRAQAERRAVNSAIQGTAADIIKAAMVLVEERLTQWRADGNAPGGQEADWEEERGGQGAGGARSRAPFPELLLQIHDELVFQCPARAEDLERLKALLQECMEEEAPRLLGLRCPLSINMSVGMSWGDM 1566
G AF IE P VL++ME G+ F P RL+ ++ + +++ L EA + F L+SP+QV+ LF + +P P TK+ G++H STSEE L+ + + ILEFR LNK+ TTY+ L A + + ++ R+H W QT+VRTGRLSC +PN+QQIP T G +G + R AF A+ L+ ADY Q E+R+LAH + D LL +F D+Y +A K +V+ +ER +K+V L V+YGMG QVA++L + A ++ + F G +++A + AR H V+T+ GRRR+L +I S D+ KRAQAER+AVN+ IQG+AADI+K AM+ + R+ W+ A G S P +LLQIHDEL+F+ A D++RL+ + C +E R L+ L++ + +G+SWG M
Sbjct: 23 GIRSAFDDIESPLQSVLSSMECTGIDFRPSRLLGIQQQLERKIQALTDEARSITKDSTFLLSSPQQVSHYLFDIMRIPLPKGLSTKQVGGSQHRSTSEEALKAIRAEAKKKGNPLHIVDIILEFRTLNKMLTTYIRPLPNFARDMSTGKSRSXXXXXXXRQSNDEKSGFVRIHPMWMQTAVRTGRLSCRKPNMQQIP-----TDGVLGVNPRDAFTASPHKCLVTADYCQKEIRILAHMANDDTLLNMFR-------SKEEVDIYKQMASACCNKPVEKVSDEERRIYKQVTLAVLYGMGVPQVAKKLSVSRSTAQNFLNTFFRRFQGVSRWIEATKDFARRHQFVTTISGRRRYLDDICSGDKGKRAQAERQAVNTIIQGSAADIMKLAMLKMSARIMDWKK--------------------AEGLDSLGSAPRILLQIHDELLFETDANESDVKRLRDAIMRCCADECVREFDLKVQLTMTLRIGISWGSM 483
BLAST of mRNA_S-ischiensis_contig8.19499.1 vs. uniprot
Match: A0A3C0JEC8_9GAMM (DNA polymerase I (Fragment) n=1 Tax=Xanthomonadaceae bacterium TaxID=1926873 RepID=A0A3C0JEC8_9GAMM) HSP 1 Score: 271 bits (693), Expect = 1.210e-76 Identity = 193/504 (38.29%), Postives = 263/504 (52.18%), Query Frame = 1
Query: 67 ALRRLARDAERCMALAKALVGQLRAA-GCEDAFRTIEMPAVPVLAAMEVAGMVFLPHRLVRLENDVAARLETLRREACAAAGGPEFNLASPEQVAEVLFTRLDLPA-PPTKKGTKHPSTSEEVLEGLADKHPAAAAILEFRGLNKLKTTYLGRLGTHAVPAGAAATAAAGILTQGMEAARVHAQWHQTSVRTGRLSCSRPNLQQIPKNSRGTLGTVGASIRRAFCAAKGYTLLAADYSQIEMRVLAHASEDRALLRLFSWDSGGGXXXXGGDVYLLVAGKVLGKEEGQVTPQERDQFKRVCLGVVYGMGTAQVARQLGLEPPAASRMISQLMKAFPGFDSFVKAARRHAREHGHVSTLGGRRRHLPEILSKDQAKRAQAERRAVNSAIQGTAADIIKAAMVLVEERLTQWRADGNAPGGQEADWEEERGGQGAGGARSRAPFPELLLQIHDELVFQCPARAEDLERLKALLQECMEEEAPRLLG---LRCPLSINMSVGMSWGD 1563
A R A DA+ + L + L +L A G E +R IEMP VPVLA +E G+ L R ND+ R+ R++A A AG EFNL SP+Q+ VLF L LPA T KG PST+EE LE +AD+H IL++RGL KL++TY +L P R+H +HQ TGRLS S PNLQ IP S G IRRAF A +G +++ DYSQIE+R++AH SED LLR F G DV+ A +V GK +VTP ER K + G++YGM +ARQLG+ A ++ +P +F++ R ARE G+V TL GRR +L +I +++Q RA AER A+N+ +QGTAADIIK AMV V+ L + GAR+ ++LQ+HDELVF+ +A + +E+ R+ G LR PL ++ +G +W +
Sbjct: 77 ATRYAAEDADVTLRLHRVLSEKLAAEPGLEKVYREIEMPLVPVLARIEANGVAIDTAELRRQSNDLGTRMLAARQKAVALAGH-EFNLDSPKQLQAVLFDELKLPALVKTPKG--QPSTNEEALEAIADQHELPRTILDYRGLAKLRSTYTDKLPEMVNP----------------HTGRLHTSYHQAGAATGRLSSSDPNLQNIPVRSED-----GRRIRRAFVAPEGRRIVSFDYSQIELRIMAHLSEDPGLLRAFE---------HGDDVHRATAAEVFGKPLAEVTPNERRAAKAINFGLMYGMSAFGLARQLGIGRAEAQDYVALYFSRYPAVHAFMERMRAQAREQGYVETLFGRRLYLNDINARNQGLRAGAERAAINAPMQGTAADIIKRAMVAVDGWLAGF------------------------GARAL-----MILQVHDELVFEVD---------EAFVPMLVEQVGKRMSGAADLRVPLVVDSGIGANWDE 509
BLAST of mRNA_S-ischiensis_contig8.19499.1 vs. uniprot
Match: A0A2T1I439_STEMA (DNA polymerase I (Fragment) n=2 Tax=Stenotrophomonas maltophilia TaxID=40324 RepID=A0A2T1I439_STEMA) HSP 1 Score: 273 bits (699), Expect = 3.490e-76 Identity = 194/501 (38.72%), Postives = 267/501 (53.29%), Query Frame = 1
Query: 67 ALRRLARDAERCMALAKALVGQLRAAGCEDA-FRTIEMPAVPVLAAMEVAGMVFLPHRLVRLENDVAARLETLRREACAAAGGPEFNLASPEQVAEVLFTRLDLPAP-PTKKGTKHPSTSEEVLEGLADKHPAAAAILEFRGLNKLKTTYLGRLGTHAVPAGAAATAAAGILTQGMEAARVHAQWHQTSVRTGRLSCSRPNLQQIPKNSRGTLGTVGASIRRAFCAAKGYTLLAADYSQIEMRVLAHASEDRALLRLFSWDSGGGXXXXGGDVYLLVAGKVLGKEEGQVTPQERDQFKRVCLGVVYGMGTAQVARQLGLEPPAASRMISQLMKAFPGFDSFVKAARRHAREHGHVSTLGGRRRHLPEILSKDQAKRAQAERRAVNSAIQGTAADIIKAAMVLVEERLTQWRADGNAPGGQEADWEEERGGQGAGGARSRAPFPELLLQIHDELVFQCPARAEDLERLKALLQECMEEEAPRLLGLRCPLSINMSVGMSWGD 1563
A R A DA+ + L AL QL A D+ +R IEMP VPVLA++E G+ L R D+++R+ +++A AG FNL SP+Q+ VLF L LPA T KG PST+EE LE +AD+H IL++RGL KL++TY +L P + RVH +HQ+ TGRLS S PNLQ IP + G IRRAF A +G LLAADYSQIE+R++AH SED L+R F G DV+ A +V G+ +VTP ER K + G++YGM +AR LG++ A ++ +PG F++ R+ AR+ G+V TL GRR +L +I +++Q RA AER A+N+ +QGTAADIIK AMV V+ QW D AP ++LQ+HDELVF+ + +E L+ + E M + A LR PL ++ VG +W +
Sbjct: 197 ASRYAAEDADITLRLHHALQPQLLAEPALDSVYRDIEMPLVPVLASIEANGVRIDTDELRRQSQDLSSRMLAAQQKATELAGR-SFNLDSPKQLQAVLFDELKLPAVVKTPKG--QPSTNEEALEAIADQHELPRVILDYRGLAKLRSTYTDKLPEMVNP----------------DTGRVHTSYHQSGAATGRLSSSDPNLQNIPIRTED-----GRRIRRAFIAPEGCQLLAADYSQIELRIMAHLSEDPGLVRAFE---------QGADVHRATAAEVFGRTLEEVTPNERRAAKAINFGLMYGMSAFGLARNLGIDRGQAQDYVALYFSRYPGVRDFMERMRQQARDQGYVETLFGRRLYLNDIHARNQGLRAGAERAAINAPMQGTAADIIKRAMVNVD----QWLRDSGAPA-------------------------RMILQVHDELVFE--TESSFVEDLRLQVVERMSQAAK----LRVPLVVDTGVGNNWDE 629
BLAST of mRNA_S-ischiensis_contig8.19499.1 vs. uniprot
Match: A0A3R8V0S8_9GAMM (DNA polymerase I (Fragment) n=2 Tax=unclassified Stenotrophomonas TaxID=196198 RepID=A0A3R8V0S8_9GAMM) HSP 1 Score: 271 bits (694), Expect = 1.570e-75 Identity = 195/501 (38.92%), Postives = 266/501 (53.09%), Query Frame = 1
Query: 67 ALRRLARDAERCMALAKALVGQLRAA-GCEDAFRTIEMPAVPVLAAMEVAGMVFLPHRLVRLENDVAARLETLRREACAAAGGPEFNLASPEQVAEVLFTRLDLPA-PPTKKGTKHPSTSEEVLEGLADKHPAAAAILEFRGLNKLKTTYLGRLGTHAVPAGAAATAAAGILTQGMEAARVHAQWHQTSVRTGRLSCSRPNLQQIPKNSRGTLGTVGASIRRAFCAAKGYTLLAADYSQIEMRVLAHASEDRALLRLFSWDSGGGXXXXGGDVYLLVAGKVLGKEEGQVTPQERDQFKRVCLGVVYGMGTAQVARQLGLEPPAASRMISQLMKAFPGFDSFVKAARRHAREHGHVSTLGGRRRHLPEILSKDQAKRAQAERRAVNSAIQGTAADIIKAAMVLVEERLTQWRADGNAPGGQEADWEEERGGQGAGGARSRAPFPELLLQIHDELVFQCPARAEDLERLKALLQECMEEEAPRLLGLRCPLSINMSVGMSWGD 1563
A R A DA+ + L + L QL A ++ +R IEMP VPVLA +E G+ L R D+ AR+ +++A AG F+L SP+Q+ VLF L LPA T KG PST+EE LE +AD+H ILE+RGL KL++TY +L PA RVH +HQ TGRLS S PNLQ IP + G IRRAF A G+ LLA DYSQIE+R++AH SED L+R F G DV+ A +V + +VTP ER K + G++YGM +A+ LG++ A ++ +PG F++ R+ AR+HG+V TL GRR +L +I +++Q RA AER A+N+ +QGTAADIIK AMV V+ DW +GG R+R ++LQ+HDELVF+ +E LE L+ + E M A LR PL ++ VG +W +
Sbjct: 193 AARYAAEDADITLRLHRVLGPQLLAVPALDNVYRQIEMPLVPVLARIEANGVYIDAGELRRQSQDLGARMLAAQQKATELAGHT-FSLDSPKQLQAVLFDELKLPALVKTPKG--QPSTNEEALEAIADQHELPRVILEYRGLAKLRSTYTDKLPEMVNPA----------------TGRVHTSYHQAGAATGRLSSSDPNLQNIPIRTDD-----GRRIRRAFVAPPGHKLLACDYSQIELRIMAHLSEDPGLVRAFE---------QGVDVHRATAAEVFSRALDEVTPNERRAAKAINFGLMYGMSAFGLAKNLGIDRGQAQDYVALYFSRYPGVRDFMERMRQQARDHGYVETLEGRRLYLNDIHARNQGLRAGAERAAINAPMQGTAADIIKRAMVKVD------------------DWLAGQGG------RAR-----MILQVHDELVFE--TESEFLETLRLKVVELMSSSAQ----LRVPLVVDAGVGDNWDE 625
BLAST of mRNA_S-ischiensis_contig8.19499.1 vs. uniprot
Match: A0A6H5JBL3_9PHAE (DNA-directed DNA polymerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBL3_9PHAE) HSP 1 Score: 258 bits (660), Expect = 3.520e-75 Identity = 147/278 (52.88%), Postives = 184/278 (66.19%), Query Frame = 1
Query: 757 LAADYSQIEMRVLAHASEDRALLRLFSWDSG---GGXXXXGGDVYLLVAGKVLGKEEGQVTPQERDQFKRVCLGVVYGMGTAQVARQLGLEPPAASRMISQLMKAFPGFDSFVKAARRHAREHGHVSTLGGRRRHLPEIL-SKDQAKRAQAERRAVNSAIQGTAADIIKAAMVLVEERLTQWRADGNAPGGQEADWEEERGGQGAGGARSRAPFPELLLQIHDELVFQCPARAEDLERLKALLQECMEEEAPRLLGLRCPLSINMSVGMSWGDMRPVV 1578
+AADYSQIEMRVLA A D L LF+ G G GGDVY +A +V GKEE V+ +ER++ K VCLG+ YGMGT QVA++L + A ++ +KAFPG + F+ A RR ARE+G+V TL GRRRHLPEI S++ A +AQAER+AVNS +QGTAADI+K AMVLV RL WR+ R +G P L++QIHDELV +CPA EDLE+LK LL +CME EAP +LG++CPL++NM VGMSWG MR VV
Sbjct: 1 MAADYSQIEMRVLADACRDPGLRNLFATLGGTNDAGAGTGGGDVYRKLAAQVFGKEEQSVSDEERNRAKVVCLGITYGMGTPQVAKKLEITESQAQGLVRSFLKAFPGIEPFMAATRRFARENGYVCTLTGRRRHLPEINNSRNAAAKAQAERQAVNSVVQGTAADIMKTAMVLVARRLDAWRS---------------RLDEGL-------DCPRLIMQIHDELVLECPACEEDLEKLKGLLADCMEVEAPAVLGIKCPLTVNMLVGMSWGSMRRVV 256
BLAST of mRNA_S-ischiensis_contig8.19499.1 vs. uniprot
Match: A0A6V2EN94_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2EN94_9STRA) HSP 1 Score: 278 bits (710), Expect = 2.970e-74 Identity = 181/496 (36.49%), Postives = 263/496 (53.02%), Query Frame = 1
Query: 130 QLRAAGCEDAFRTIEMPAVPVLAAMEVAGMVFLPHRLVRLENDVAARLETLRREACAAAGGPEFNLASPEQVAEVLFTRLDLPAPP-----TKKGTKHPSTSEEVLEGLADK--------HPAAAAILEFRGLNKLKTTYLGRLGTHAVPAGAAATAAAGILTQGMEAARVHAQWHQTSVRTGRLSCSRPNLQQIPKNSRGTLGTVGASIRRAFCAAKGYT-LLAADYSQIEMRVLAHASEDRALLRLFSWDSGGGXXXXGGDVYLLVAGKVLGKEEGQVTPQERDQFKRVCLGVVYGMGTAQVARQLGLEPPAASRMISQLMKAFPGFDSFVKAARRHAREHGHVSTLGGRRRHLPEILSKDQAKRAQAERRAVNSAIQGTAADIIKAAMVLVEERLTQWRADGNAPGGQEADWEEERGGQGAGGARSRAPFPELLLQIHDELVFQCPARAEDLERLKALLQECMEEEAPRLLGLRCPLSINMSVGMSWGDMRPV 1575
Q+R G AF IE P +L+AME G+ F+P R + ++ + +++ L EA + A F L+SP+QV+ +LF L+L P T G++H STSEE L+ + + H +LEFR LNKL TTY+ L A + T A R+H W QT+VRTGRLSC +PN+QQ+P +G G + R F A L A DYSQ E+R+LAH S D+ L+ +F D G D+Y ++ + G +V+ +ER +K+V L ++YGMG QVA++L + A + + F G +++ + AR++ V+T+ GRRR+L +I S D AK+AQAER+AVN+ IQG+AAD+IK AM+ RL W + GG P LLLQIHDEL+F+ A D+ +LK ++ +C EE L+ PLS+ + G+SWG M V
Sbjct: 662 QMRDKGLNSAFLEIESPVQSILSAMECIGVGFVPKRFLGIQKQLEKKIDELVAEARSIAKDNNFLLSSPQQVSHLLFDVLNLAIPQGLQAKTVSGSQHRSTSEEALKAIQAEAKSKSNTGHRIIDILLEFRSLNKLLTTYIRPLPNFARKGEYRKKKSKKYKTDVTMAMRIHPMWMQTAVRTGRLSCRKPNMQQVPN-----VGAFGVNPRDGFVATSSEKCLFACDYSQNEIRILAHMSGDQTLISMFRED--------GVDIYKQMSSAITGMPVDEVSDKERKIYKQVTLAILYGMGVPQVAKKLSVTRSTAQNFFTSFYRRFHGVRQWMEQTKDFARQNCFVTTIAGRRRYLDDINSTDTAKKAQAERQAVNTIIQGSAADLIKLAMLKTASRLMDWHKEVIEAGGTNI-------------------APRLLLQIHDELLFEVMANETDVSKLKDIVTQCCGEECVEEFKLKVPLSLKCTCGISWGLMNEV 1125 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19499.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig8.19499.1 >prot_S-ischiensis_contig8.19499.1 ID=prot_S-ischiensis_contig8.19499.1|Name=mRNA_S-ischiensis_contig8.19499.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=529bp MASMALRRLARDAERCMALAKALVGQLRAAGCEDAFRTIEMPAVPVLAAMback to top mRNA from alignment at S-ischiensis_contig8:1821867..1832243- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig8.19499.1 ID=mRNA_S-ischiensis_contig8.19499.1|Name=mRNA_S-ischiensis_contig8.19499.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=10377bp|location=Sequence derived from alignment at S-ischiensis_contig8:1821867..1832243- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig8:1821867..1832243- >mRNA_S-ischiensis_contig8.19499.1 ID=mRNA_S-ischiensis_contig8.19499.1|Name=mRNA_S-ischiensis_contig8.19499.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=3174bp|location=Sequence derived from alignment at S-ischiensis_contig8:1821867..1832243- (Schizocladia ischiensis KU_0333)back to top |