mRNA_S-ischiensis_contig8.19497.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig8.19497.1 vs. uniprot
Match: A0A836CPQ3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPQ3_9STRA) HSP 1 Score: 144 bits (363), Expect = 7.010e-39 Identity = 107/235 (45.53%), Postives = 135/235 (57.45%), Query Frame = 1
Query: 1 MGKRSKDGAAKKPRVELVFDPEARKDYLTGFHKRKQARRRFGLAMQQIKDRKGKLEDRKERREAEAKRRHELGL-PEDLSSFDIRGRARREAAKTPVGEAETVDFDDGYTQAMFGEAVTITTCSGI-PESDGEEDEEED---------------RLERELREEKLARAREGWGRGAAQQSQWSLAAVTKRLAANMPASGKRAARGRARGXXXXXXXXRGRKGTKGAELMAKAKGA 654
MG + K+P E+ FDPEAR +YL GFHKRKQ RRRFGLAMQQIKDRK +LE+RKE+R A ++ ELGL DL FD++ + R+ A P AE VDF D T+AMFG VT+TT GI P SD EED + ++ ELRE K A+ AQ + WSLAAVT+R+AA MP KR RG G+ ++ EL+A+AKG+
Sbjct: 1 MGGGDRKKGKKRPITEISFDPEARTEYLQGFHKRKQERRRFGLAMQQIKDRKERLEERKEKRVANQEKLDELGLGSRDLGEFDMKAQRRKATAADPERGAEVVDFADDATRAMFGGDVTVTTTFGIAPGSDDEEDGGREXXXXXXXXXXXSGAGHMDEELREHKRAKLARH-----AQDAHWSLAAVTRRVAAKMPTK-KRHGGXXGRGSGGDVKHGSGKAVSR--ELLARAKGS 227
BLAST of mRNA_S-ischiensis_contig8.19497.1 vs. uniprot
Match: D7FK63_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK63_ECTSI) HSP 1 Score: 113 bits (282), Expect = 2.640e-27 Identity = 98/216 (45.37%), Postives = 123/216 (56.94%), Query Frame = 1
Query: 133 MQQIKDRKGKLEDRKERREAEAKRRHELGLPEDLSSFDIRGRARREAAKTPVGEAETVDFDDGYTQAMFGEAVTITTCSGIPESDGEEDEEED-RLERELREEKLARAREGWGRG-------------------AAQQSQWSLAAVTKRLAANMPASGKRAARGRARGXXXXXXXXRGRKGTKG----------AELMAKAKGAMPRAELGRAKRK 690
MQ+IKDRK +LE ELG+ EDL SFDI+G+AR E AK + VDF+DG+TQAMFG+ VT+TT GIP+SD EED E RLE+EL +EK + E RG A++ +WSLAAV+KRLAANMPA ++ A R XXXXXXXX A LM KA+G+MPRAEL + K++
Sbjct: 1 MQEIKDRKERLEXXXXXXXXXXXXXXELGVKEDLGSFDIKGKAR-ENAKAKAEQLVQVDFEDGHTQAMFGDTVTVTTVVGIPDSDDEEDARETARLEKELLQEKKRKRAERLERGRXXXXXXXXARGGVAGDSEGAKEERWSLAAVSKRLAANMPAKPRKGAAKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAALMDKARGSMPRAELSKGKKR 215
BLAST of mRNA_S-ischiensis_contig8.19497.1 vs. uniprot
Match: W7TCP2_9STRA (Nucleolar protein 12 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TCP2_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 7.380e-21 Identity = 74/182 (40.66%), Postives = 103/182 (56.59%), Query Frame = 1
Query: 22 GAAKKPRVELVFDPEARKDYLTGFHKRKQARRRFGLAMQQIKDRKGKLEDRKERREAEAKRRHEL-----GLPEDLSSFDIRGRARREAAKTPVGEAETVDFDDGYTQAMFGEAVTITTCSGIPESDGEEDEEEDRLERELREEKLARAREGWGRGAAQQSQWSLAAVTKRLAANMPASGKR 552
G K ++ LVFDPEAR++YLTGF KRK+ RR FGLAMQQ+K+RK +L +R+E R+A+ +L G LS + +E +T E +DD +T A FGE+V +TT GIP G+E++EE + +REE R+G G Q S+A K +A MPA K+
Sbjct: 35 GYKKNGKLALVFDPEARREYLTGFSKRKKERRTFGLAMQQVKNRKARLMEREELRKAKKGALDDLPASIKGAEPYLSGTALANGKEKETMETKAKEEV---YDDRFTTATFGESVLVTTSFGIPS--GDEEDEEGGVLAMVREE-----RKGGGVDKEQLQAGSVAHFKKLVAGKMPAKPKK 206
BLAST of mRNA_S-ischiensis_contig8.19497.1 vs. uniprot
Match: A0A5D6XSU7_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XSU7_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 4.910e-18 Identity = 58/137 (42.34%), Postives = 80/137 (58.39%), Query Frame = 1
Query: 1 MGKRSKDGAAKKPRVELVFDPEARKDYLTGFHKRKQARRRFGLAMQQIKDRKGKLEDRKERREAEAKRRHELGL---PEDLSSFDIRGRARREAAKTPVGEAETVDFDDGYTQAMFGEAVTITTCSGIPESDGEEDE 402
G K KK ++ + FDPE R +YLTGFHKRKQ RRRFGL M+ K K LE RK+RRE + ++ +L L P D ++ ++AA T V + FDD +TQ+ FG+ VT+TT G +SD +D+
Sbjct: 37 FGSDKKPNLKKKSKLVVTFDPEKRTEYLTGFHKRKQERRRFGLDMEAFKQHKRLLEARKQRREEQKEQLAKLNLLEPPADEAAKPGASDDEKDAAVTNV-----LQFDDEHTQSKFGDVVTVTTSVGDLKSDESDDD 168
BLAST of mRNA_S-ischiensis_contig8.19497.1 vs. uniprot
Match: B8BWC0_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BWC0_THAPS) HSP 1 Score: 86.7 bits (213), Expect = 1.090e-16 Identity = 54/137 (39.42%), Postives = 78/137 (56.93%), Query Frame = 1
Query: 19 DGAAKKPRVELVFDPEARKDYLTGFHKRKQARRRFGLAMQQIKDRKGKLEDRKERREAEAKRRHEL---------GLPEDLSSFDIRGRARREAAKTPV-GEAETVDFDDGYTQAMFGEAVTITTCSGIPESDGEED 399
D ++ +VE+ FD R++YLTGF RK+ RR FGLAMQ++KDR+ KLE+RK+ REA+ ++ E+ G+ + S D G +A+ P E E F D T FG V++TT GIP D ++D
Sbjct: 35 DRLPQRKKVEITFDKSNREEYLTGFSTRKKERRAFGLAMQKVKDRQAKLEERKDNREAQLEKVEEIERNKEELRKGVAGEDDSDDDAGSYEEQASSAPQHNEKEMHTFQDERTTHQFGGLVSVTTTFGIPSDDEDDD 171
BLAST of mRNA_S-ischiensis_contig8.19497.1 vs. uniprot
Match: W4G9Q9_9STRA (Uncharacterized protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G9Q9_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 1.090e-16 Identity = 63/145 (43.45%), Postives = 82/145 (56.55%), Query Frame = 1
Query: 7 KRSKDGAAK--KPRVELV--FDPEARKDYLTGFHKRKQARRRFGLAMQQIKDRKGKLEDRKERREAEAKRRHEL--GLPEDLSSFDIRGRARREAAKTPVGEAETVDFDDGYTQAMFGEAVTITTCSGIPESDGEE--DEEEDRL 417
K K GA + KP+ +L+ FD + RKDYLTGFHKRKQ RRRFG M+ K +K +E RK R+ + HEL LPE + + G+ E VDFDD +TQ FG+ VT+TT G +SD E+ D+EE L
Sbjct: 2 KPQKGGAKRTSKPKSKLIVTFDADKRKDYLTGFHKRKQDRRRFGHDMEAFKKQKALIEARKIRKAEQ----HELMASLPEVANVKPV----------ATDGDTEVVDFDDAHTQGKFGDVVTVTTSVGELKSDSEDELDDEEHEL 132
BLAST of mRNA_S-ischiensis_contig8.19497.1 vs. uniprot
Match: A0A8K1C2G3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C2G3_PYTOL) HSP 1 Score: 85.5 bits (210), Expect = 1.660e-16 Identity = 53/141 (37.59%), Postives = 79/141 (56.03%), Query Frame = 1
Query: 1 MGKRSKDGAAKKP------RVELVFDPEARKDYLTGFHKRKQARRRFGLAMQQIKDRKGKLEDRKERREAEAKRRHELGLPE---DLSSFDIRGRARREAAKTPVGEAETVDFDDGYTQAMFGEAVTITTCSGIPESDGEE 396
MGK G KKP ++ + FD + RK++LTGFHKRKQ RRRFGL M+ K +K +E RK+RRE + L + E D ++ + + ++ + + FDD +TQ+ FG+ VT+TT G +SD E+
Sbjct: 1 MGKNKSHGGGKKPANKKKSKLVITFDADKRKEFLTGFHKRKQERRRFGLDMEAYKQKKKLMEARKQRREEHKQMLERLNIKEGDEDEAATNNVAESDEDSDSDQEEATKVMTFDDVHTQSKFGDVVTVTTSVGDLKSDSED 141
BLAST of mRNA_S-ischiensis_contig8.19497.1 vs. uniprot
Match: A0A485LKQ5_9STRA (Aste57867_22725 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LKQ5_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 5.140e-16 Identity = 57/124 (45.97%), Postives = 77/124 (62.10%), Query Frame = 1
Query: 31 KKPRVELVFDPEARKDYLTGFHKRKQARRRFGLAMQQIKDRKGKLEDRKERREAEAKRRHEL-GLPEDLSSFDIRGRARREAAKTPVGEAETVDFDDGYTQAMFGEAVTITTCSGIPESDGEED 399
KK ++ + FD E RKDYLTGFHKRKQ RRR+G M+ K +K ++E RK R+ A++R L GLPE A + A P G+A V+F+D +TQ FG+ VT+TT G +SD EE+
Sbjct: 10 KKNKLVVTFDAEKRKDYLTGFHKRKQDRRRYGHDMEAFKKKKAQIEARKIRK---AEQREMLAGLPEV---------ANIKPAADPKGKA-VVEFNDEHTQGKFGDVVTVTTSVGELQSDSEEE 120
BLAST of mRNA_S-ischiensis_contig8.19497.1 vs. uniprot
Match: A0A7S1UHQ2_9STRA (Hypothetical protein (Fragment) n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UHQ2_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 3.660e-15 Identity = 59/149 (39.60%), Postives = 77/149 (51.68%), Query Frame = 1
Query: 31 KKPRVELVFDPEARKDYLTGFHKRKQARRRFGLAMQQIKDRKGKLEDRKERREAEAKRRHELGLPE--DLSSFDIRGR-------------ARREAAKTPVGEAETVDFDDGYTQAMFGEAVTITTCSGIPESDGEEDEEEDRLERELR 432
KK R+E+ FDPEARK++LTGF KRK RRR GLAMQ +KDR+ LE RKE RE R + E D + + + A++ E ++F D TQ FG+ VT+TT G+ D D+E L RE R
Sbjct: 9 KKRRLEVSFDPEARKEFLTGFRKRKLERRRHGLAMQALKDRRELLETRKELRENRRASRRGTTVDELKDAEAEEAXXXXXXXXXXXXXDEDTKPAASEKTSASREELEFTDNVTQERFGDVVTVTTTLGLEADDEGSDDEARLLARERR 157
BLAST of mRNA_S-ischiensis_contig8.19497.1 vs. uniprot
Match: A0A6G0X6U2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X6U2_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 1.280e-14 Identity = 59/139 (42.45%), Postives = 79/139 (56.83%), Query Frame = 1
Query: 13 SKDGAAKKPRVELVFDPEARKDYLTGFHKRKQARRRFGLAMQQIKDRKGKLEDRKERREAEAKRRHEL--GLPEDLSSFDIRGRARREAAKTPVGEAETVDFDDGYTQAMFGEAVTITTCSGIPESDGEE--DEEEDRL 417
SK+ AKK ++ + FD + RK+YLTGFHKRKQ RRRFG M+ K +K ++E RK R+ AE K EL LPE K + V+FDD +T+ FG VT+TT G +SD E+ D+EE+ L
Sbjct: 5 SKNSKAKKSKLVVTFDADKRKEYLTGFHKRKQERRRFGHDMEAYKKKKAQIEARKIRK-AEQK---ELLASLPEVAD------------VKPVTTGKDVVNFDDKHTKEKFGNVVTVTTSLGELQSDSEDELDDEENEL 127 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19497.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig8.19497.1 >prot_S-ischiensis_contig8.19497.1 ID=prot_S-ischiensis_contig8.19497.1|Name=mRNA_S-ischiensis_contig8.19497.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=230bp MGKRSKDGAAKKPRVELVFDPEARKDYLTGFHKRKQARRRFGLAMQQIKDback to top mRNA from alignment at S-ischiensis_contig8:1808769..1811872+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig8.19497.1 ID=mRNA_S-ischiensis_contig8.19497.1|Name=mRNA_S-ischiensis_contig8.19497.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=3104bp|location=Sequence derived from alignment at S-ischiensis_contig8:1808769..1811872+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig8:1808769..1811872+ >mRNA_S-ischiensis_contig8.19497.1 ID=mRNA_S-ischiensis_contig8.19497.1|Name=mRNA_S-ischiensis_contig8.19497.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1380bp|location=Sequence derived from alignment at S-ischiensis_contig8:1808769..1811872+ (Schizocladia ischiensis KU_0333)back to top |