mRNA_S-ischiensis_contig8.19476.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig8.19476.1 vs. uniprot
Match: D8LLL4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLL4_ECTSI) HSP 1 Score: 130 bits (326), Expect = 4.990e-32 Identity = 113/263 (42.97%), Postives = 145/263 (55.13%), Query Frame = 3
Query: 354 MAEVFNT-SPCLLGKRPGGVLTPHHQRGHCHELAREGTSHLGDMS-TLKKRRLGYGFGEAM-----------------GAAGAGMERAVGLE----NAHASPIAAGGASPSGRGAKRARPSSLSGSAPHSEETHKE--LEAEVGQLRHQCAALRSHCDAKQGELTRAGEEVARLQERLGGFEKELERTMNENRILKRAVTIQNTKQKEMEGELHARRAASDQAAEYVRRLEQANYALSVRLQTMAGGLASNDFMG-QGPPDVY 1064
MAEVF++ SPC+LGKR VL+PH GT G + + KKRRLG G + AG +RA L +AH S AG A+ + RG+ S S H + + + E+ LR + A L++H K+ L A EE RL+E +G F+KELER ENRILKRAV IQNTK KE+EG+LH + A+ QAAEYV+RLEQ NYALSVR+Q M G ++DFMG Q PPDV+
Sbjct: 1 MAEVFSSNSPCMLGKR---VLSPHSH----------GTLMGGQLDFSSKKRRLGQGLDQGSFDRSESDQXXXXXXXXPSPVRAG-KRARPLSPLQPSAHFSSGGAGEAASASRGSGLFGGGSFSQQHQHQQRAQRTGAEDGELAALRREVAVLQAHAAEKESGLNMAREENGRLKEGVGMFQKELERLSAENRILKRAVGIQNTKGKELEGQLHGLQQAAGQAAEYVKRLEQTNYALSVRVQAM-GNSGASDFMGGQRPPDVF 248
BLAST of mRNA_S-ischiensis_contig8.19476.1 vs. uniprot
Match: A0A836CIB6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIB6_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 4.910e-15 Identity = 46/90 (51.11%), Postives = 61/90 (67.78%), Query Frame = 3
Query: 798 LQERLGGFEKELERTMNENRILKRAVTIQNTKQKEMEGELHARRAASDQAAEYVRRLEQANYALSVRLQTMAG-GLASNDFMGQGPPDVY 1064
++E +G ++LER ENRILKRAV IQNT+ K++E +L A + A+ AA Y +R+EQ NYAL VR+Q M G G FM + PPDVY
Sbjct: 1 MREAMGALARDLERFQGENRILKRAVNIQNTRCKDVEAQLGAAQEAAAAAAAYAKRVEQVNYALGVRVQQMEGMGGEGGGFMERQPPDVY 90
BLAST of mRNA_S-ischiensis_contig8.19476.1 vs. uniprot
Match: A0A6A3Z7N1_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3Z7N1_9STRA) HSP 1 Score: 74.7 bits (182), Expect = 3.080e-12 Identity = 51/123 (41.46%), Postives = 73/123 (59.35%), Query Frame = 3
Query: 696 EAEVGQLRHQCAALRSHCDAKQGELTRAGEEVARLQERLGGFEKELERTMNENRILKRAVTIQNTKQKEMEGELHARRAASDQAAEYVRRLEQANYALSVRLQTMAGGLASNDFMGQGPPDVY 1064
+AE+ ++R A K+ E R G+E+ QER+ ++ R EN++LKRAV IQN +++E++ E +A + + QAAE++RRLEQANY L V LQT A N Q PPDVY
Sbjct: 67 QAEIARIR---AEYEQFILKKEAEFQRLGQELQHTQERVAQQASDVARLQGENKLLKRAVGIQNQQKEEVQHENNALKQLATQAAEHMRRLEQANYTLRVHLQTSTS--AGNGHQQQ-PPDVY 183
BLAST of mRNA_S-ischiensis_contig8.19476.1 vs. uniprot
Match: K3XAW0_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XAW0_GLOUD) HSP 1 Score: 71.6 bits (174), Expect = 3.960e-11 Identity = 50/132 (37.88%), Postives = 77/132 (58.33%), Query Frame = 3
Query: 669 HSEETHKELEAEVGQLRHQCAALRSHCDAKQGELTRAGEEVARLQERLGGFEKELERTMNENRILKRAVTIQNTKQKEMEGELHARRAASDQAAEYVRRLEQANYALSVRLQTMAGGLASNDFMGQGPPDVY 1064
H E + +AE+ ++R A K+ E + E+A++ +KE+ER +EN++LKRA+TIQN +++E + E R + QAAE+++RLEQ+NYALSV LQT +S F PPDV+
Sbjct: 61 HVEYFEQAKQAEIARIR---AEYEQFILKKEVEFQQCRHELAQVHASTQSRDKEIERLQSENKLLKRAITIQNQQKEECQQENAVLRNLATQAAEHIKRLEQSNYALSVHLQTSTS-TSSEHFQ---PPDVF 185
BLAST of mRNA_S-ischiensis_contig8.19476.1 vs. uniprot
Match: H3H1K6_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H1K6_PHYRM) HSP 1 Score: 71.2 bits (173), Expect = 4.900e-11 Identity = 46/123 (37.40%), Postives = 70/123 (56.91%), Query Frame = 3
Query: 696 EAEVGQLRHQCAALRSHCDAKQGELTRAGEEVARLQERLGGFEKELERTMNENRILKRAVTIQNTKQKEMEGELHARRAASDQAAEYVRRLEQANYALSVRLQTMAGGLASNDFMGQGPPDVY 1064
+AE+ ++R A K E R G+++ QER+ ++ R EN++LKRAV IQN +++E++ E A + + QAAE+++RLEQANY L V LQT + + PPDVY
Sbjct: 64 QAEIARIR---AEYEQFIMKKDAEFQRLGQQLQHTQERVAAQASDVARLHGENKLLKRAVAIQNQQKEEVQHENSALKQLATQAAEHMKRLEQANYTLRVHLQTSTSAGNGHHYQ---PPDVY 180
BLAST of mRNA_S-ischiensis_contig8.19476.1 vs. uniprot
Match: A0A662WKW3_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WKW3_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 1.160e-10 Identity = 46/105 (43.81%), Postives = 65/105 (61.90%), Query Frame = 3
Query: 756 KQGELTRAGEEVARLQERLGGFEKELERTMNENRILKRAVTIQNTKQKEMEGELHARRAASDQAAEYVRRLEQANYALSVRLQTMAGGLASNDFMG--QGPPDVY 1064
K E R +E+ + ERL K++ER EN++LKRA+ IQ+ ++ E++ E A R + QAAE+++RLEQANY L V LQT ++N G Q PPDVY
Sbjct: 93 KDAEFQRGRQELMQTHERLHHQSKDVERLQGENKLLKRAIAIQSQQKDEVQQENAALRNLTTQAAEHIKRLEQANYTLRVHLQT-----STNSGHGHRQQPPDVY 192
BLAST of mRNA_S-ischiensis_contig8.19476.1 vs. uniprot
Match: A0A6V1NE11_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NE11_HETAK) HSP 1 Score: 70.9 bits (172), Expect = 1.210e-10 Identity = 47/129 (36.43%), Postives = 74/129 (57.36%), Query Frame = 3
Query: 678 ETHKELEAEVGQLRHQCAALRSHCDAKQGELTRAGEEVARLQERLGGFEKELERTMNENRILKRAVTIQNTKQKEMEGELHARRAASDQAAEYVRRLEQANYALSVRLQTMAGGLASNDFMGQGPPDVY 1064
+ ++ +AE+ LR L +AK+ L++ E A LQ +L F+ EL+R EN+ILK+AV +QN+K KE E + + A QA +++++LEQ NYAL + L+ + D Q PPDV+
Sbjct: 90 QNNENFQAEIENLRF---TLSKELEAKEASLSQFKIENASLQNQLAQFQHELQRIQEENKILKKAVNLQNSKAKESEQTIKMQEATLVQAVDHIKKLEQTNYALRIHLENSKSTPLTFD---QRPPDVF 212
BLAST of mRNA_S-ischiensis_contig8.19476.1 vs. uniprot
Match: A0A484E156_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E156_BRELC) HSP 1 Score: 70.1 bits (170), Expect = 1.280e-10 Identity = 42/103 (40.78%), Postives = 63/103 (61.17%), Query Frame = 3
Query: 756 KQGELTRAGEEVARLQERLGGFEKELERTMNENRILKRAVTIQNTKQKEMEGELHARRAASDQAAEYVRRLEQANYALSVRLQTMAGGLASNDFMGQGPPDVY 1064
+ E R G+E+ QER+ ++ R +EN++LKRAV IQN +++E+ E +A + + QAAE++RRLEQAN+ L V LQT + + PPDVY
Sbjct: 82 RDAEFQRLGQELEHSQERVAYQANDIVRLQSENKVLKRAVAIQNQQKEEVLSENNALKELATQAAEHMRRLEQANFTLRVHLQTSTNAGFGHQYQ---PPDVY 181
BLAST of mRNA_S-ischiensis_contig8.19476.1 vs. uniprot
Match: A0A7S2LD89_9STRA (Hypothetical protein n=2 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LD89_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 3.430e-10 Identity = 41/93 (44.09%), Postives = 55/93 (59.14%), Query Frame = 3
Query: 786 EVARLQERLGGFEKELERTMNENRILKRAVTIQNTKQKEMEGELHARRAASDQAAEYVRRLEQANYALSVRLQTMAGGLASNDFMGQGPPDVY 1064
E+ L+ G + + ++ +ENRILKRAVTIQ +Q ++ EL R +QA E +RRLEQ N L ++Q A NDFMG PPDVY
Sbjct: 148 EIDHLKSENGSLQTQNQKVEHENRILKRAVTIQQDRQHQVSAELEGARTFKEQAEERIRRLEQMNLTLQYQMQAQ-NSSAGNDFMGLRPPDVY 239
BLAST of mRNA_S-ischiensis_contig8.19476.1 vs. uniprot
Match: A0A5D6XUD9_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XUD9_9STRA) HSP 1 Score: 68.9 bits (167), Expect = 3.530e-10 Identity = 46/122 (37.70%), Postives = 69/122 (56.56%), Query Frame = 3
Query: 699 AEVGQLRHQCAALRSHCDAKQGELTRAGEEVARLQERLGGFEKELERTMNENRILKRAVTIQNTKQKEMEGELHARRAASDQAAEYVRRLEQANYALSVRLQTMAGGLASNDFMGQGPPDVY 1064
AE+ ++R A H K+ EL E+ + + ++LER EN++LKRA+TIQ+ ++ E + E R + QAAE+++RLE +NYALSV LQT S+ F PPDV+
Sbjct: 70 AEIARIR---AEYEQHAMKKEMELQSCRRELQQARGAAHATARDLERLAGENKLLKRAITIQSQQKDECQQENAVLRNLATQAAEHIKRLEASNYALSVHLQTSTNAATSSRFQ---PPDVF 185 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19476.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig8.19476.1 >prot_S-ischiensis_contig8.19476.1 ID=prot_S-ischiensis_contig8.19476.1|Name=mRNA_S-ischiensis_contig8.19476.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=238bp MAEVFNTSPCLLGKRPGGVLTPHHQRGHCHELAREGTSHLGDMSTLKKRRback to top mRNA from alignment at S-ischiensis_contig8:1673746..1677238- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig8.19476.1 ID=mRNA_S-ischiensis_contig8.19476.1|Name=mRNA_S-ischiensis_contig8.19476.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=3493bp|location=Sequence derived from alignment at S-ischiensis_contig8:1673746..1677238- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig8:1673746..1677238- >mRNA_S-ischiensis_contig8.19476.1 ID=mRNA_S-ischiensis_contig8.19476.1|Name=mRNA_S-ischiensis_contig8.19476.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1428bp|location=Sequence derived from alignment at S-ischiensis_contig8:1673746..1677238- (Schizocladia ischiensis KU_0333)back to top |