mRNA_S-ischiensis_contig8.19415.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig8.19415.1 vs. uniprot
Match: D7FK61_ECTSI (Efflux ABC transporter, permease/ATP-binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK61_ECTSI) HSP 1 Score: 668 bits (1724), Expect = 7.030e-228 Identity = 371/621 (59.74%), Postives = 453/621 (72.95%), Query Frame = 2
Query: 5 ELIRPEAWLMGGGVLLLGGATSVSLVVPRAMGTLIDGMMENTGGYTSWEAAGLMLGLFALQSVMHVGRSGLMAVAGERFAARLRKRAFGGIIGQDTAFFDLNKTGDLVNRLASDILLMQKSVTGSIPQGLRSVFLMSGSCSMLLYLSPYLAATSLCVFPPAVGVAVFMGRRMKGQQRRVQEALAASSALADEASLTLLPLPNGTYPLKPYVRMFSAEGRELARYSQKVDESYSLARRIGLTNALFEGAMNLGGSASLVAVMAVGGQQVAEGSLSIGGMTSFLLYSTFLAGSFAGVSSVYSDVMRAMGAGERVLDIMLSAEQGGGLESTRAHAYGDRASGVGKDHGARAAGKDEAXXXXXXXXXXAETLPGPAPG---SGALRFEGVHFSYPARPEVAVLTGLTLHVEPGTVLAIVGSSGSGKSTLLRLLTRLYDPQEGVIEMDGVSLKDMDPRKLRDKVGVVEQEPVLFGGSVGDNIRYGRPEASDEEVVEAAKVANAHAFIEAFPEGYGTLVGEHGVQMSGGQKQRIAVARAVLKNPAVMVLDEATSALDGESEHLVQAALERVARERVSLVIAHRLSTVRSMSNQVAVLEGGQVVELGSYDDLLDRPDGRFRRMVAYQM 1858
EL RPE+ L+GG ++LL G+T++SL VP+ MG LID +M+ TG YT WEAAG+++ LF QS+M GRSGLM VAGER AARLR AFG ++ Q+TAFFD N+TGDLVNRLASD+LL+Q SVT S QGLR++ ++ G ML LSP LA S+ VFPP GV V+ GRRMK QQ++VQ+ALA SSA+A+E + VR FSAE RE RY++KV SY +ARR+G+T+A F G+M+ GG ASL AVMA+GGQQVA G+LSIG MTSFLLYSTFLA +F G++ VYS +MRA+GA ERV+ I+ SAE + S+ + +A +D A E G A G +G + F+ VHFSYP RP VL G+TL VE G+ LAIVG+SG GKST+LRLLTRLYDPQ G IE+DGV L ++PR LRD+VGVVEQEPVLFGGS+ DNIRYGRPEAS EV AA VANA F+E FP+GY T VGE GVQMSGGQKQRIA+ARAVLK+PA+M+LDEATSALD ESEHLVQAALERV R SL++AHRLSTVRSM+N++ VL G+VVE+GSYD+L +PDG FRR+V YQM
Sbjct: 45 ELARPESKLIGGSIVLLLGSTTISLAVPKVMGGLIDSVMQGTGAYTPWEAAGILMALFGAQSIMLTGRSGLMTVAGERVAARLRNLAFGSMVVQETAFFDRNRTGDLVNRLASDVLLVQGSVTTSAAQGLRNLLMVVGCTGMLCNLSPELAMVSVAVFPPVAGVGVWFGRRMKKQQKKVQQALAGSSAVAEEVLSNIRT-----------VRQFSAEFREKGRYAEKVGISYDMARRVGVTDAFFAGSMHFGGHASLCAVMALGGQQVASGALSIGDMTSFLLYSTFLAVNFGGLTGVYSQIMRALGASERVMAIINSAEAPPAIASS-------------DNQDQDSATRDSAANL--------EIAGGAALGDTVAGHVVFKDVHFSYPTRPHAPVLGGMTLEVEAGSSLAIVGASGCGKSTVLRLLTRLYDPQSGTIELDGVPLHMLEPRGLRDRVGVVEQEPVLFGGSIADNIRYGRPEASRPEVEAAAAVANASDFVEGFPDGYDTQVGEGGVQMSGGQKQRIAIARAVLKDPAIMLLDEATSALDSESEHLVQAALERVTEGRTSLIVAHRLSTVRSMANKICVLNKGEVVEIGSYDELASKPDGHFRRLVQYQM 633
BLAST of mRNA_S-ischiensis_contig8.19415.1 vs. uniprot
Match: A0A835ZGY2_9STRA (Efflux ABC transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGY2_9STRA) HSP 1 Score: 578 bits (1490), Expect = 1.820e-193 Identity = 325/619 (52.50%), Postives = 421/619 (68.01%), Query Frame = 2
Query: 5 ELIRPEAWLMGGGVLLLGGATSVSLVVPRAMGTLIDGMMENTGGYTSWEAAGLMLGLFALQSVMHVGRSGLMAVAGERFAARLRKRAFGGIIGQDTAFFDLNKTGDLVNRLASDILLMQKSVTGSIPQGLRSVFLMSGSCSMLLYLSPYLAATSLCVFPPAVGVAVFMGRRMKGQQRRVQEALAASSALADEASLTLLPLPNGTYPLKPYVRMFSAEGRELARYSQKVDESYSLARRIGLTNALFEGAMNLGGSASLVAVMAVGGQQVAEGSLSIGGMTSFLLYSTFLAGSFAGVSSVYSDVMRAMGAGERVLDIMLSAEQGGGLESTRAHAYGDRASGVGKDHGARAAGKDEAXXXXXXXXXXAETLPGPAPGSGALRFEGVHFSYPARPEVAVLTGLTLHVEPGTVLAIVGSSGSGKSTLLRLLTRLYDPQEGVIEMDGVSLKDMDPRKLRDK-VGVVEQEPVLFGGSVGDNIRYGRPEASDEEVVEAAKVANAHAFIEAFPEGYGTLVGEHGVQMSGGQKQRIAVARAVLKNPAVMVLDEATSALDGESEHLVQAALERVARERVSLVIAHRLSTVRSMSNQVAVLEGGQVVELGSYDDLLDRPDGRFRRMVAYQM 1858
L RPE L+G G+ LL G + VSL PR MG LID +M G T +EAA +++GLF+LQS+M VGRS ++VAGER AARLR+R F + QD AFFD N TG+LVNRLASD+LL+QK++T S QGLRS+FL++GS M+ +SPYLAA S+ +FPP +G + GR++K QQ+ VQ ALA SS +A+E ++ VR F AE RE ARY+ KV++S +LA R+G+T A+FEG+M+LG ASLVAVMA GG Q+ G+L++G MTSFLLYSTF+A + +G+ SVY+D MRA+GA +RV+DI+ AE G + G +AG A G +RF+GV F YP RPE VL GL L V+ G LA+VG SG GKSTL RLLTRLY+P G + +DGV + +D LR+K VG+V+QEPVLF S+ DNIRYGRPEA+D EVV+AAKVANAH FI F GY T G G Q+SGGQ+QRIA+ARAVLK+PAV++LDE +SALD +SE VQ ALE V R R S++IAHRLST R+M++++AV++ G+VVE GS+D+L+ R G FRRM Q+
Sbjct: 3 SLARPEGRLIGSGLTLLAGTSCVSLAFPRVMGGLIDAVMGGAGTTTPYEAAAVLMGLFSLQSLMLVGRSAALSVAGERIAARLRRRLFQAVAKQDMAFFDANSTGELVNRLASDVLLVQKALTSSTAQGLRSLFLVTGSSVMMYTMSPYLAAVSVAIFPPVMGAGWYFGRKLKAQQKSVQAALAGSSGVAEEVIGSIST-----------VRAFGAEQRECARYNTKVNDSCTLAARVGVTTAVFEGSMHLGAHASLVAVMAAGGAQLVAGALTVGDMTSFLLYSTFMALNVSGLGSVYADAMRAIGASDRVMDIIRGAEGEG-------------------ERGGGSAGAVLAAVR------------------GDIRFDGVQFLYPTRPEHQVLQGLALEVQAGKTLAVVGPSGCGKSTLCRLLTRLYEPSAGSVTLDGVDISSLDVLWLREKAVGIVDQEPVLFNASIADNIRYGRPEATDAEVVQAAKVANAHEFITQFSHGYQTQAGASGQQLSGGQRQRIAIARAVLKDPAVLLLDEFSSALDSDSEQRVQEALEHVTRGRTSIIIAHRLSTARAMADKIAVMDSGRVVESGSFDELMARDGGVFRRMYLTQV 573
BLAST of mRNA_S-ischiensis_contig8.19415.1 vs. uniprot
Match: Q1DDB6_MYXXD (Efflux ABC transporter, permease/ATP-binding protein n=22 Tax=Myxococcaceae TaxID=31 RepID=Q1DDB6_MYXXD) HSP 1 Score: 449 bits (1156), Expect = 1.450e-143 Identity = 266/617 (43.11%), Postives = 376/617 (60.94%), Query Frame = 2
Query: 5 ELIRPEAWLMGGGVLLLGGATSVSLVVPRAMGTLIDGMMENTGGYTSWEAAGLMLGLFALQSVMHVGRSGLMAVAGERFAARLRKRAFGGIIGQDTAFFDLNKTGDLVNRLASDILLMQKSVTGSIPQGLRSVFLMSGSCSMLLYLSPYLAATSLCVFPPAVGVAVFMGRRMKGQQRRVQEALAASSALADEASLTLLPLPNGTYPLKPYVRMFSAEGRELARYSQKVDESYSLARRIGLTNALFEGAMNLGGSASLVAVMAVGGQQVAEGSLSIGGMTSFLLYSTFLAGSFAGVSSVYSDVMRAMGAGERVLDIMLSAEQGGGLESTRAHAYGDRASGVGKDHGARAAGKDEAXXXXXXXXXXAETLPGPAPGSGALRFEGVHFSYPARPEVAVLTGLTLHVEPGTVLAIVGSSGSGKSTLLRLLTRLYDPQEGVIEMDGVSLKDMDPRKLRDKVGVVEQEPVLFGGSVGDNIRYGRPEASDEEVVEAAKVANAHAFIEAFPEGYGTLVGEHGVQMSGGQKQRIAVARAVLKNPAVMVLDEATSALDGESEHLVQAALERVARERVSLVIAHRLSTVRSMSNQVAVLEGGQVVELGSYDDLLDRPDGRFRRMVAYQ 1855
+L RPE + G L L ++ +L PRA+G L+D + Y A LML +F +Q + R L AGER +RLRK F ++ Q+ FFD +TG+L +RL+SD ++Q +VT ++ LR V G +LLY S L L V PP VF GRR++ R+ Q+ALAAS +A+E + VR F+AE E+ RYS V+ S++LA++ L ++F G ++ G S+ AV+ GG+ V EG LS+G +TSFL+Y+ +A SF+G++ +++D MRA GA ERV +++ DR +G AG ++ G ++F GVHF+YP+RP+V VL GL L + PG V+A+VG SG+GKSTL LL+R YDPQ G + +DG L ++P LR +G+V QEP LF S+ DNIRYGRP A+D +V EAA+ ANAHA+IE FPEGYGT VGE GVQ+SGGQKQR+A+ARAVLK+P +++LDEATSALD ESEHLV+ ALER+ + R +L+IAHRLSTV + +++V VL+GG V++ G++ L+ + +G +RR+V Q
Sbjct: 23 KLARPELLPLAAGTLFLLISSGATLAYPRAIGDLVDQALTARDRYVVDRLAMLMLAVFTVQGIAMALRIYLFTNAGERVVSRLRKDLFRALLSQEVGFFDSRRTGELTSRLSSDTTVLQTTVTANVSMMLRYVVTALGGVGLLLYTSVQLTLVMLAVIPPVAIGGVFYGRRVRVISRQAQDALAASGEVAEEDLSGIRT-----------VRSFAAERHEVERYSVAVERSFTLAKKRALQTSVFMGVASIAGYGSIAAVLWYGGRLVVEGGLSVGELTSFLIYTMLVAFSFSGIAELWADFMRASGAAERVFELL------------------DRKPAIG-------AGGEQLTDLR-----------------GHVQFRGVHFAYPSRPDVPVLQGLDLELRPGEVVAVVGPSGAGKSTLASLLSRFYDPQNGEVLLDGHPLTALEPEWLRRNIGMVAQEPQLFSCSIADNIRYGRPGATDAQVEEAARAANAHAYIERFPEGYGTQVGERGVQLSGGQKQRVAIARAVLKDPRLLILDEATSALDAESEHLVKDALERLMKGRTTLIIAHRLSTVAN-ADRVLVLDGGVVIQSGTHASLMSQ-EGLYRRLVERQ 584
BLAST of mRNA_S-ischiensis_contig8.19415.1 vs. uniprot
Match: A0A1H7TJT3_STIAU (ATP-binding cassette, subfamily B n=4 Tax=Stigmatella TaxID=40 RepID=A0A1H7TJT3_STIAU) HSP 1 Score: 441 bits (1133), Expect = 3.580e-140 Identity = 270/618 (43.69%), Postives = 370/618 (59.87%), Query Frame = 2
Query: 2 AELIRPEAWLMGGGVLLLGGATSVSLVVPRAMGTLIDGMMENTGGYTSWEAAGLMLGLFALQSVMHVGRSGLMAVAGERFAARLRKRAFGGIIGQDTAFFDLNKTGDLVNRLASDILLMQKSVTGSIPQGLRSVFLMSGSCSMLLYLSPYLAATSLCVFPPAVGVAVFMGRRMKGQQRRVQEALAASSALADEASLTLLPLPNGTYPLKPYVRMFSAEGRELARYSQKVDESYSLARRIGLTNALFEGAMNLGGSASLVAVMAVGGQQVAEGSLSIGGMTSFLLYSTFLAGSFAGVSSVYSDVMRAMGAGERVLDIMLSAEQGGGLESTRAHAYGDRASGVGKDHGARAAGKDEAXXXXXXXXXXAETLPGPAPGSGALRFEGVHFSYPARPEVAVLTGLTLHVEPGTVLAIVGSSGSGKSTLLRLLTRLYDPQEGVIEMDGVSLKDMDPRKLRDKVGVVEQEPVLFGGSVGDNIRYGRPEASDEEVVEAAKVANAHAFIEAFPEGYGTLVGEHGVQMSGGQKQRIAVARAVLKNPAVMVLDEATSALDGESEHLVQAALERVARERVSLVIAHRLSTVRSMSNQVAVLEGGQVVELGSYDDLLDRPDGRFRRMVAYQ 1855
A L RPEA + G L + +SL+ P+AM +ID + + AA M + A+Q++ R L AGER RLR++ F I+GQ+ AFFD KTG+L NRLASD ++Q +V+ ++ LR++ G ++L Y SP L L V P AV GRR++ + VQ+ALAAS+ +A+E+ + VR F+AE E+ARY +D+++ LARR ++ F + GG A+ V V+ GG+ V E LS+GG+TSFL+YS F+A S ++ +++D MRA GA ERV ++M DR + G R PA G + VHF+YP RP+ VL G+ L + PG ++AIVG SG+GKST+ LLTRLYDPQ G I +DG L+ +DP LR ++GVV QEP+LF S+ +NIRYGR +ASD EV AA+ ANAH FI FPEGY T VGE GVQ+SGGQKQR+A+ARAVLK+P +++LDEATSALD ESEHLV+ ALER+ + R +L+IAHRLSTV +N+V VLEGG VV+ GS+ L+ + +G +RR+V Q
Sbjct: 20 ASLARPEARTLLAGTFFLAVGSGMSLLYPQAMRLIIDEALGSRDRALIDRAALGMTFILAIQALAVALRYYLFTTAGERVVTRLRQKLFANIMGQEVAFFDERKTGELTNRLASDTTVLQNTVSSNVSMVLRNLATAVGGVALLFYTSPTLTLLMLSVVPAVAVSAVVYGRRVRKLSKEVQDALAASNEVAEESLSGVRT-----------VRAFAAEKHEVARYRSAMDKAFELARRRIRHSSTFMAVASFGGFAAAVVVLWYGGRLVVEDKLSVGGLTSFLVYSLFVAFSLGALAELWADFMRASGAAERVFELM------------------DRLPTIPTSGGER-----------------------PARIEGRIELREVHFAYPTRPDTQVLQGIDLTIAPGEIVAIVGPSGAGKSTIASLLTRLYDPQGGRILLDGQDLRTLDPEWLRQQIGVVAQEPLLFSSSIAENIRYGRMDASDAEVEAAARAANAHDFISRFPEGYRTPVGERGVQLSGGQKQRVAIARAVLKDPRLLILDEATSALDAESEHLVKDALERLMQGRTTLIIAHRLSTVMG-ANRVLVLEGGNVVQSGSHAALMSQ-EGLYRRLVEKQ 583
BLAST of mRNA_S-ischiensis_contig8.19415.1 vs. uniprot
Match: A0A2R5G1M6_9STRA (ABC transporter ATP-binding protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G1M6_9STRA) HSP 1 Score: 442 bits (1138), Expect = 4.860e-140 Identity = 267/650 (41.08%), Postives = 389/650 (59.85%), Query Frame = 2
Query: 8 LIRPEAWLMGGGVLLLGGATSVSLVVPRAMGTLIDGMMENTGGYTSWEAAGLMLGLFALQSVMHVGRSGLMAVAGERFAARLRKRAFGGIIGQDTAFFDLNKTGDLVNRLASDILLMQKSVTGSIPQGLRSVFLMSGSCSMLLYLSPYLAATSLCVFPPAVGVAVFMGRRMKGQQRRVQEALAASSALADEASLTLLPLPNGTYPLKPYVRMFSAEGRELARYSQKVDESYSLARRIGLTNALFEGAMNLGGSASLVAVMAVGGQQVAEGSLSIGGMTSFLLYSTFLAGSFAGVSSVYSDVMRAMGAGERVLDIMLSAEQ-GGGLESTRA----------------------------------HAYGDRASGVGKDHGAR-----------AAGKDEAXXXXXXXXXXAETLPGPAPGSGALRFEGVHFSYPARPEVAVLTGLTLHVEPGTVLAIVGSSGSGKSTLLRLLTRLYDPQEGVIEMDGVSLKDMDPRKLRDKVGVVEQEPVLFGGSVGDNIRYGRPEASDEEVVEAAKVANAHAFIEAFPEGYGTLVGEHGVQMSGGQKQRIAVARAVLKNPAVMVLDEATSALDGESEHLVQAALERVARERVSLVIAHRLSTVRSMSNQVAVLEGGQVVELGSYDDLLDR 1819
+ PE+ L+G + +S+SLV P A+G ++D + ++ G + AG + GLF Q + VGR+ ++ VAGER AR RK+ F I+ QD FFD ++TG+L+NRL++D L+QKSVTG++ GLRS F++ G ML Y SP LA SL V PP A + GR +KG+Q +VQ+ALA +S +A+E + VR F++E E+A+Y+ ++D +Y A +GL +A F+G+++L + SLVAV+ GG QV G L+ G +TSFL+YS ++ + +SSVYSD+MR +GA R+ I+ Q + S RA H G G+ ++ R +G DE + TL P P G + V F+YP R E +L L L +E G+++A+VGSSGSGKST+ +L R+YDPQ+GV+ +DGV ++ +DP LR +GVV QEPVLF G++ +NIRYG +AS ++V AA+ A A FIE FP G+ T VGE GVQ+SGGQKQR+A+ARA+LK+P +++LDEATSALD ESE VQ A+E + + R + IAHRLST+R+ ++ +AVLE G++ E GS+D+L+ +
Sbjct: 10 MAAPESRLIGASMGTQVITSSISLVFPAAIGRILDLSLSDSTGLSPTLVAGTLTGLFIFQGALIVGRTAMLNVAGERLIARFRKQLFASILAQDLHFFDRSRTGELINRLSTDTQLVQKSVTGNLVSGLRSSFMVVGGTMMLFYTSPTLALVSLSVIPPVGVAARYFGRYLKGRQAKVQDALAETSTVAEEVIANIRT-----------VRQFASEPLEVAKYNARIDTAYRRACEVGLASAWFDGSVHLAANFSLVAVLTFGGSQVMSGQLTAGALTSFLMYSLYVGFNITNLSSVYSDLMRGVGASSRIFGIIDRVPQMPSSITSARASRAGATTDPSTLPPSVLHSIYSLLDADEDPSQKKHPIGADFFGIVQEERDRHITPPGTSVLARSGYDELADQI------SATLETP-PIKGEIELRDVSFAYPLRSESPILQNLNLRLERGSMMALVGSSGSGKSTIGAMLMRMYDPQQGVVLIDGVDIRRIDPHWLRKHIGVVAQEPVLFSGTIEENIRYGNMDASMDQVYNAARAARALDFIEGFPNGFNTRVGERGVQLSGGQKQRVAIARAILKDPPIVILDEATSALDAESEFQVQQAIEEMMKGRSVVSIAHRLSTMRA-ADTIAVLEQGRIAEQGSFDELMQK 640
BLAST of mRNA_S-ischiensis_contig8.19415.1 vs. uniprot
Match: UPI0019D6E71D (ABC transporter transmembrane domain-containing protein n=2 Tax=Pyxidicoccus TaxID=224458 RepID=UPI0019D6E71D) HSP 1 Score: 438 bits (1127), Expect = 2.860e-139 Identity = 266/621 (42.83%), Postives = 368/621 (59.26%), Query Frame = 2
Query: 8 LIRPEA-WLMGGGVLLLGGATSVSLVVPRAMGTLIDGMMENTGGYTSWEAAGLMLGLFALQSVMHVGRSGLMAVAGERFAARLRKRAFGGIIGQDTAFFDLNKTGDLVNRLASDILLMQKSVTGSIPQGLRSVFLMSGSCSMLLYLSPYLAATSLCVFPPAVGVAVFMGRRMKGQQRRVQEALAASSALADEASLTLLPLPNGTYPLKPYVRMFSAEGRELARYSQKVDESYSLARRIGLTNALFEGAMNLGGSASLVAVMAVGGQQVAEGSLSIGGMTSFLLYSTFLAGSFAGVSSVYSDVMRAMGAGERVLDIM----LSAEQGGGLESTRAHAYGDRASGVGKDHGARAAGKDEAXXXXXXXXXXAETLPGPAPGSGALRFEGVHFSYPARPEVAVLTGLTLHVEPGTVLAIVGSSGSGKSTLLRLLTRLYDPQEGVIEMDGVSLKDMDPRKLRDKVGVVEQEPVLFGGSVGDNIRYGRPEASDEEVVEAAKVANAHAFIEAFPEGYGTLVGEHGVQMSGGQKQRIAVARAVLKNPAVMVLDEATSALDGESEHLVQAALERVARERVSLVIAHRLSTVRSMSNQVAVLEGGQVVELGSYDDLLDRPDGRFRRMVAYQ 1855
L RPE +++ G V LL + S +LV PRA+G L+D + A ML +F +Q V R+ AGER ARLRK FG ++ Q+ AFFD +TG+L +RLASD ++Q +VT +I LR G ++L Y S L L + P AVF GRR++ R+VQ+ALA S+ +A+E + VR F+AE EL RY VD S+SLAR +A+F GA+++ G + V+ GG+ V +G LS+G +TSFL+Y+ +A SF+ ++ +++D MRA GA +RV ++M A G L R H + F V F+YP R ++ VL GL L + PG V+A+VG SG+GKSTL LL+R YDPQ G + +DG L +DP LR +G+V QEP LF S+ DNIRYGRP+A+D +V EAA+ ANAHA+I+ FPEGYGT VGE GVQ+SGGQKQR+A+ARAVLK+P +++LDEATSALD ESEHLV+ ALER+ + R +L+IAHRLSTV + +++V VLEGG V++ G++ L+ + DG +RR+V Q
Sbjct: 24 LARPELPFIIAGTVFLLVSSVS-TLVYPRAIGNLVDEALSTRSQEMLDGLALTMLAVFVVQGVAMALRAYYFNTAGERVVARLRKSLFGALLSQEVAFFDARRTGELTSRLASDTTVLQNTVTANISMALRYGVQALGGVALLFYTSARLTGVMLAIIPAVTMGAVFYGRRVRVISRQVQDALADSTNVAEEDLSGIRT-----------VRSFAAERNELERYGAAVDRSFSLARERTRQSAIFMGAVSIAGYGGIAVVLWYGGRLVVQGQLSVGALTSFLIYTMLVAFSFSAMAELWADFMRASGAADRVFELMDREPAIASGGAQLPEVRGH----------------------------------------------VEFRDVRFAYPTRSDITVLQGLNLELRPGEVVAVVGPSGAGKSTLASLLSRFYDPQGGAVLLDGHPLTSLDPEWLRRNIGMVAQEPQLFSCSIADNIRYGRPDATDAQVEEAARAANAHAYIQRFPEGYGTQVGERGVQLSGGQKQRVAIARAVLKDPRLLILDEATSALDAESEHLVKDALERLMKGRTTLIIAHRLSTVAN-ADRVLVLEGGHVIQSGTHSALMGQ-DGLYRRLVERQ 584
BLAST of mRNA_S-ischiensis_contig8.19415.1 vs. uniprot
Match: UPI0013D9933D (ABC transporter transmembrane domain-containing protein n=1 Tax=Pyxidicoccus trucidator TaxID=2709662 RepID=UPI0013D9933D) HSP 1 Score: 438 bits (1126), Expect = 4.020e-139 Identity = 262/616 (42.53%), Postives = 375/616 (60.88%), Query Frame = 2
Query: 8 LIRPEAWLMGGGVLLLGGATSVSLVVPRAMGTLIDGMMENTGGYTSWEAAGLMLGLFALQSVMHVGRSGLMAVAGERFAARLRKRAFGGIIGQDTAFFDLNKTGDLVNRLASDILLMQKSVTGSIPQGLRSVFLMSGSCSMLLYLSPYLAATSLCVFPPAVGVAVFMGRRMKGQQRRVQEALAASSALADEASLTLLPLPNGTYPLKPYVRMFSAEGRELARYSQKVDESYSLARRIGLTNALFEGAMNLGGSASLVAVMAVGGQQVAEGSLSIGGMTSFLLYSTFLAGSFAGVSSVYSDVMRAMGAGERVLDIMLSAEQGGGLESTRAHAYGDRASGVGKDHGARAAGKDEAXXXXXXXXXXAETLPGPAPGSGALRFEGVHFSYPARPEVAVLTGLTLHVEPGTVLAIVGSSGSGKSTLLRLLTRLYDPQEGVIEMDGVSLKDMDPRKLRDKVGVVEQEPVLFGGSVGDNIRYGRPEASDEEVVEAAKVANAHAFIEAFPEGYGTLVGEHGVQMSGGQKQRIAVARAVLKNPAVMVLDEATSALDGESEHLVQAALERVARERVSLVIAHRLSTVRSMSNQVAVLEGGQVVELGSYDDLLDRPDGRFRRMVAYQ 1855
L RPE + GG L +++ +L P+A+G L+D + + A +MLG+F +Q V R+ L AGER +RLRK F ++ Q+ AFFD +TG+L +RLASD ++Q +VT +I LR G +L Y S L L + P AV GRR++ R+VQ+ALAASS +A+E + VR F+AE E+ RY VD ++ LAR+ +++F GA+++ G + AV+ GG+ V +G+LS+G +TSFL+Y+ ++ SF+ ++ +++D MRA GA +RV +++ DR + A+G E LP G + F V F+YP RP+V VL GL L + PG V+A+VG SG+GKSTL LL+R YDPQ G + +DG L +DP LR +G+V QEP LF S+ DNIRYGRPE++D E+ EAA+ ANAHA+I+ FPEGYGT VGE GVQ+SGGQKQR+A+ARAVLK+P +++LDEATSALD ESEHLV+ ALER+ + R +L+IAHRLSTV + +++V VLEGG +++ G++ L+ + DG +RR+V Q
Sbjct: 24 LARPELASLVGGTFFLLVSSAATLAYPKAIGGLVDEALGSRSREMLDGLALMMLGVFVVQGVAMALRAYLFNTAGERVVSRLRKDLFRALLSQEVAFFDARRTGELTSRLASDTTVLQNTVTANISMALRYAVQALGGVGLLFYTSARLTGVMLAIIPAVAVGAVLYGRRVRHISRQVQDALAASSEVAEEDLSGIRT-----------VRSFAAEPHEVERYGTAVDRAFMLARQRTFQSSVFMGAVSIAGYGGIAAVLWYGGRLVVDGNLSVGALTSFLIYTMLVSFSFSAMAELWADFMRASGAADRVFELL------------------DRKPAI-------ASG--------------GERLPEVR---GHVEFRDVRFAYPTRPDVPVLQGLNLELRPGEVVAVVGPSGAGKSTLASLLSRFYDPQGGAVLLDGHPLTSLDPEWLRRNIGMVAQEPQLFSCSIADNIRYGRPESTDAEIEEAARAANAHAYIQRFPEGYGTQVGERGVQLSGGQKQRVAIARAVLKDPRLLILDEATSALDSESEHLVKDALERLMKGRSTLIIAHRLSTVAN-ADRVLVLEGGLIIQSGTHAALMGQ-DGLYRRLVERQ 584
BLAST of mRNA_S-ischiensis_contig8.19415.1 vs. uniprot
Match: UPI001CED2937 (ABC transporter transmembrane domain-containing protein n=1 Tax=Myxococcus sp. RHSTA-1-4 TaxID=2874601 RepID=UPI001CED2937) HSP 1 Score: 432 bits (1111), Expect = 3.900e-137 Identity = 258/621 (41.55%), Postives = 366/621 (58.94%), Query Frame = 2
Query: 5 ELIRPEAWLMGGGVLLLGGATSVSLVVPRAMGTLIDGMMENTGGYTSWEAAGLMLGLFALQSVMHVGRSGLMAVAGERFAARLRKRAFGGIIGQDTAFFDLNKTGDLVNRLASDILLMQKSVTGSIPQGLRSVFLMSGSCSMLLYLSPYLAATSLCVFPPAVGVAVFMGRRMKGQQRRVQEALAASSALADEASLTLLPLPNGTYPLKPYVRMFSAEGRELARYSQKVDESYSLARRIGLTNALFEGAMNLGGSASLVAVMAVGGQQVAEGSLSIGGMTSFLLYSTFLAGSFAGVSSVYSDVMRAMGAGERVLDIM----LSAEQGGGLESTRAHAYGDRASGVGKDHGARAAGKDEAXXXXXXXXXXAETLPGPAPGSGALRFEGVHFSYPARPEVAVLTGLTLHVEPGTVLAIVGSSGSGKSTLLRLLTRLYDPQEGVIEMDGVSLKDMDPRKLRDKVGVVEQEPVLFGGSVGDNIRYGRPEASDEEVVEAAKVANAHAFIEAFPEGYGTLVGEHGVQMSGGQKQRIAVARAVLKNPAVMVLDEATSALDGESEHLVQAALERVARERVSLVIAHRLSTVRSMSNQVAVLEGGQVVELGSYDDLLDRPDGRFRRMVAYQ 1855
L RPE ++ G L +++ SL P+A+G L+D + A ML +F +Q V R+ L AGER ARLRK F ++ Q+ AFFD +TG+L +RLASD ++Q +VT ++ LR ++G ++L Y S L L + P V AV GRR++G R+VQ+ALAA+S +A+E + VR F+AE E+ RY +D ++ AR ++F GA ++ G ++ AV+ GG+ V G LS+G +TSFL+Y+ +A SF+ ++ ++ D MRA GA +RV +++ A G L R H + F VHF+YP RP+V VL G+ L + PG V+A+VG SG+GKSTL LL+R YDPQ G + +DG L +DP LR +G+V QEP LF S+ DNIRYGRP+A+D ++ EAA+ ANAHAFI+ FPEGY T VGE GVQ+SGGQKQR+A+ARAVLK+P +++LDEATSALD ESEHLV+ ALER+ + R +L+IAHRLSTV + +++V VLEGG V++ G++ L+ + DG +RR+V Q
Sbjct: 6 SLARPELPVLAAGTFFLLVSSAASLAYPQAIGDLVDEALGTRSQQMLDGLALAMLAVFVVQGVAMALRAYLFNTAGERVVARLRKDLFRAMLSQEIAFFDGRRTGELTSRLASDTTVLQNTVTANVSMALRFTMQIAGGVALLFYTSARLTGVMLAIIPAVVLGAVLYGRRVRGISRQVQDALAAASNVAEEDLSGIRT-----------VRSFAAEPNEVERYGTAMDRVFAFARARTRETSIFLGATSIAGYGAVAAVLWYGGRLVVAGGLSVGELTSFLIYTMLVAFSFSALAELWGDFMRASGASDRVFELLDREPAIAPGGQSLPEVRGH----------------------------------------------VEFRDVHFAYPTRPDVPVLQGVNLELRPGEVVAVVGPSGAGKSTLASLLSRFYDPQGGAVLLDGHPLTSLDPHWLRRNIGMVAQEPQLFSCSIADNIRYGRPDATDAQIEEAARAANAHAFIQRFPEGYQTQVGERGVQLSGGQKQRVAIARAVLKDPRLLILDEATSALDAESEHLVKDALERLMKGRTTLIIAHRLSTVAN-ADRVLVLEGGHVIQSGTHAALMGQ-DGLYRRLVERQ 567
BLAST of mRNA_S-ischiensis_contig8.19415.1 vs. uniprot
Match: A0A085WV65_9DELT (Lipid A export ATP-binding/permease protein MsbA n=1 Tax=Hyalangium minutum TaxID=394096 RepID=A0A085WV65_9DELT) HSP 1 Score: 432 bits (1111), Expect = 7.070e-137 Identity = 265/617 (42.95%), Postives = 367/617 (59.48%), Query Frame = 2
Query: 5 ELIRPEAWLMGGGVLLLGGATSVSLVVPRAMGTLIDGMMENTGGYTSWEAAGLMLGLFALQSVMHVGRSGLMAVAGERFAARLRKRAFGGIIGQDTAFFDLNKTGDLVNRLASDILLMQKSVTGSIPQGLRSVFLMSGSCSMLLYLSPYLAATSLCVFPPAVGVAVFMGRRMKGQQRRVQEALAASSALADEASLTLLPLPNGTYPLKPYVRMFSAEGRELARYSQKVDESYSLARRIGLTNALFEGAMNLGGSASLVAVMAVGGQQVAEGSLSIGGMTSFLLYSTFLAGSFAGVSSVYSDVMRAMGAGERVLDIMLSAEQGGGLESTRAHAYGDRASGVGKDHGARAAGKDEAXXXXXXXXXXAETLPGPAPGSGALRFEGVHFSYPARPEVAVLTGLTLHVEPGTVLAIVGSSGSGKSTLLRLLTRLYDPQEGVIEMDGVSLKDMDPRKLRDKVGVVEQEPVLFGGSVGDNIRYGRPEASDEEVVEAAKVANAHAFIEAFPEGYGTLVGEHGVQMSGGQKQRIAVARAVLKNPAVMVLDEATSALDGESEHLVQAALERVARERVSLVIAHRLSTVRSMSNQVAVLEGGQVVELGSYDDLLDRPDGRFRRMVAYQ 1855
L RPE + G L + +SL+ P+ M +ID + + A M +FA+QSV R AGER RLR++ F ++ Q+ AFFD KTG+L NRLASD ++Q +V+ +I LR+ G +ML Y SP L L V PP AVF GR ++ + VQ+ALA S+ +A+E+ + VR F+AE E+ARY VD ++ LARR ++ F + G A+ AV GG+ V +GSL++GG+TSFL+YS F+A + ++ +++D MRA GA ERV ++M DR + G R A + G ++ + V F+YP+RP+V VL G+ L++EPG +AIVG SGSGKST+ LL RLYDPQ G I +DG LK +DP LR ++GVV QEP+LF S+ DNIRYGR +A+ E+ AAK ANAH FI FPEGY TLVGE GVQ+SGGQKQR+A+ARA+LK+P +++LDEATSALD ESEHLV+ AL+R+ + R +L+IAHRLSTV +++V VLEGG++V+ GS+ L+ + DG +RR+V Q
Sbjct: 24 SLARPETRTLIAGTFFLVVGSGMSLLYPQKMRQIIDEALGARDRAMIDQIALGMAVIFAIQSVAVALRYYFFTTAGERVVTRLRQKLFSSLMSQEVAFFDERKTGELTNRLASDTTVLQNTVSANISMVLRNGVQALGGIAMLFYTSPALTLVMLAVVPPVAVGAVFYGRGVRKLSKEVQDALANSNEVAEESLSGVRT-----------VRSFAAEKSEVARYRSAVDRAFELARRRIRQSSTFMAVASFCGFAAAAAVFWYGGRLVVDGSLTVGGLTSFLVYSMFVAFALGALTELWADFMRAAGASERVFELM------------------DRQPTIPMSGGERLAHTE-----------------------GRVQLQDVRFTYPSRPDVPVLQGIELNIEPGEAVAIVGPSGSGKSTIASLLGRLYDPQGGHILLDGKDLKALDPEWLRQQIGVVAQEPLLFSSSIADNIRYGRADATQAEIEAAAKAANAHDFIMRFPEGYNTLVGERGVQLSGGQKQRVAIARAMLKDPRLLILDEATSALDAESEHLVKEALDRLMKGRTTLIIAHRLSTVMD-ADRVMVLEGGKIVQSGSHSALMGQ-DGLYRRLVERQ 586
BLAST of mRNA_S-ischiensis_contig8.19415.1 vs. uniprot
Match: UPI001A1F0A0C (ATP-binding cassette domain-containing protein n=2 Tax=Myxococcaceae TaxID=31 RepID=UPI001A1F0A0C) HSP 1 Score: 426 bits (1094), Expect = 1.160e-134 Identity = 255/618 (41.26%), Postives = 370/618 (59.87%), Query Frame = 2
Query: 5 ELIRPEAWLMGGGVLLLGGATSVSLVVPRAMGTLIDGMMENTGGYTSWEAAGLMLGLFALQSVMHVGRSGLMAVAGERFAARLRKRAFGGIIGQDTAFFDLNKTGDLVNRLASDILLMQKSVTGSIPQGLRSVFLMSGSCSMLLYLSPYLAATSLCVFPPAVGVAVFMGRRMKGQQRRVQEALAASSALADEASLTLLPLPNGTYPLKPYVRMFSAEGRELARYSQKVDESYSLARRIGLTNALFEGAMNLGGSASLVAVMAVGGQQVAEGSLSIGGMTSFLLYSTFLAGSFAGVSSVYSDVMRAMGAGERVLDIMLSAEQGGGLESTRAHAYGDRASGVGKDHGARAAGKDEAXXXXXXXXXXAETLPGPAPGSGALRFEGVHFSYPARPEVAVLTGLTLHVEPGTVLAIVGSSGSGKSTLLRLLTRLYDPQEGVIEMDGVSLKDMDPRKLRDKVGVVEQEPVLFGGSVGDNIRYGRPEASDEEVVEAAKVANAHAFIEAFPEGYGTLVGEHGVQMSGGQKQRIAVARAVLKNPAVMVLDEATSALDGESEHLVQAALERVARERVSLVIAHRLSTVRSMSNQVAVLEGGQVVELGSYDDLLDRPDGRFRRMVAYQM 1858
+L RPE + + L + SLV P+A+ L+D + AA +M+ +F +Q V R+ L AGER RLR+ F ++ Q+ AFFD ++TG+L +RLASD ++Q +V+ +I LR+ G ++L Y SP LA L + PP V GRR++G R+VQ+A++ +S +A+E+ L VR F+AE E+ RY + +Y LAR ++F G + G ++V V+ GG+ V +G L++G +TSFL+Y+ +A S + + +++D MRA GA ERV +++ DR + G R A D G + F+GV F+YP+RP+V VL G+ L + PG V+A+VG SG+GKSTL L++R YDP +G + +DG L +DP LR ++G+V QEP+LF S+ +NIRYGRPEA+D +V EAA+ ANAH FI FPEGY TLVGE GVQ+SGGQKQR+A+ARAVLK+P ++VLDEATSALD ESEHLV+ ALE++ R R +L+IAHRLSTV S +++V VLE G+VV+ G++ L+ +G +RR+V Q+
Sbjct: 2 QLARPEVPTLALATVFLMMGSGASLVYPQAIRVLVDEALGARDHALIDRAALIMMAVFVVQGVAIALRAYLFNTAGERIVVRLRQDLFRSLMNQEVAFFDAHRTGELTSRLASDTTVLQNTVSANISMALRNAAQAVGGLALLFYTSPKLALLMLGIVPPVAVGGVLYGRRLRGLSRKVQDAVSGASEVAEESLSGLRT-----------VRSFAAEKAEVERYGSAIQRTYELARERAAQASIFIGLASSAGYGAVVVVLWYGGRLVTDGQLTMGALTSFLVYTMLMAFSLSALVDLWADFMRATGAAERVFELV------------------DRVPTIPASGGERPATLD-----------------------GRVEFQGVRFAYPSRPDVEVLQGIDLTLNPGEVVAVVGPSGAGKSTLASLMSRFYDPLQGHLRLDGKDLTTLDPEWLRRQLGMVAQEPLLFATSIAENIRYGRPEATDAQVEEAARAANAHDFIVRFPEGYRTLVGERGVQLSGGQKQRVAIARAVLKDPRLLVLDEATSALDAESEHLVKDALEKLMRGRTTLIIAHRLSTVAS-ADRVLVLEHGRVVQSGNHAALMSE-EGLYRRLVEKQV 565 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19415.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig8.19415.1 >prot_S-ischiensis_contig8.19415.1 ID=prot_S-ischiensis_contig8.19415.1|Name=mRNA_S-ischiensis_contig8.19415.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=625bp MGGGVLLLGGATSVSLVVPRAMGTLIDGMMENTGGYTSWEAAGLMLGLFAback to top mRNA from alignment at S-ischiensis_contig8:1269324..1284220- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig8.19415.1 ID=mRNA_S-ischiensis_contig8.19415.1|Name=mRNA_S-ischiensis_contig8.19415.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=14897bp|location=Sequence derived from alignment at S-ischiensis_contig8:1269324..1284220- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig8:1269324..1284220- >mRNA_S-ischiensis_contig8.19415.1 ID=mRNA_S-ischiensis_contig8.19415.1|Name=mRNA_S-ischiensis_contig8.19415.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=3750bp|location=Sequence derived from alignment at S-ischiensis_contig8:1269324..1284220- (Schizocladia ischiensis KU_0333)back to top |